AlfalfaGEDB | MS.gene68084

M. sativa cultivar XinJiangDaYe / MS.gene68084

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68084.t1	RHN81315.1	69.3	313	92	3	1	313	1	309	5.10E-111	411

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68084.t1	Q3EAE5	32.5	246	148	8	19	257	2	236	1.4e-19	98.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68084.t1	A0A396JZA3	69.3	313	92	3	1	313	1	309	3.7e-111	411.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene68084	MS.gene51795	PPI
MS.gene36810	MS.gene68084	PPI
MS.gene67914	MS.gene68084	PPI
MS.gene42267	MS.gene68084	PPI
MS.gene68084	MS.gene072231	PPI
MS.gene035057	MS.gene68084	PPI
MS.gene68084	MS.gene002112	PPI
MS.gene67917	MS.gene68084	PPI
MS.gene68084	MS.gene033695	PPI
MS.gene040253	MS.gene68084	PPI
MS.gene68084	MS.gene60520	PPI
MS.gene68084	MS.gene068017	PPI
MS.gene055754	MS.gene68084	PPI
MS.gene68084	MS.gene54959	PPI
MS.gene36752	MS.gene68084	PPI
MS.gene32300	MS.gene68084	PPI
MS.gene68084	MS.gene09990	PPI
MS.gene68084	MS.gene30057	PPI
MS.gene01653	MS.gene68084	PPI
MS.gene68084	MS.gene36809	PPI
MS.gene36764	MS.gene68084	PPI
MS.gene36942	MS.gene68084	PPI
MS.gene047137	MS.gene68084	PPI
MS.gene09993	MS.gene68084	PPI
MS.gene68084	MS.gene36943	PPI
MS.gene68084	MS.gene36807	PPI
MS.gene36763	MS.gene68084	PPI
MS.gene36804	MS.gene68084	PPI
MS.gene047136	MS.gene68084	PPI
MS.gene072000	MS.gene68084	PPI
MS.gene68084	MS.gene80861	PPI
MS.gene68084	MS.gene026015	PPI
MS.gene032379	MS.gene68084	PPI
MS.gene78164	MS.gene68084	PPI
MS.gene68084	MS.gene028491	PPI
MS.gene68084	MS.gene60518	PPI
MS.gene68084	MS.gene51793	PPI
MS.gene68084	MS.gene024564	PPI
MS.gene68084	MS.gene050535	PPI
MS.gene54960	MS.gene68084	PPI
MS.gene033694	MS.gene68084	PPI
MS.gene68084	MS.gene90228	PPI
MS.gene68084	MS.gene050470	PPI
MS.gene68084	MS.gene30044	PPI
MS.gene054896	MS.gene68084	PPI
MS.gene68081	MS.gene68084	PPI
MS.gene68084	MS.gene032379	PPI
MS.gene23706	MS.gene68084	PPI
MS.gene072003	MS.gene68084	PPI
MS.gene36743	MS.gene68084	PPI
MS.gene007794	MS.gene68084	PPI
MS.gene68084	MS.gene024262	PPI
MS.gene68084	MS.gene60522	PPI
MS.gene065373	MS.gene68084	PPI
MS.gene072244	MS.gene68084	PPI
MS.gene053586	MS.gene68084	PPI
MS.gene97791	MS.gene68084	PPI
MS.gene071257	MS.gene68084	PPI
MS.gene68084	MS.gene045772	PPI
MS.gene32305	MS.gene68084	PPI
MS.gene68084	MS.gene30261	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68084.t1	MTR_1g090883	69.775	311	90	3	1	311	1	307	1.08e-145	415
MS.gene68084.t1	MTR_4g056040	55.891	331	112	4	11	311	1	327	3.29e-110	330
MS.gene68084.t1	MTR_4g056020	59.136	301	119	3	11	311	1	297	6.20e-110	327
MS.gene68084.t1	MTR_4g056070	53.529	340	116	3	11	311	1	337	7.71e-104	311
MS.gene68084.t1	MTR_4g055990	54.006	337	116	3	11	311	1	334	1.37e-103	313
MS.gene68084.t1	MTR_4g055990	54.006	337	116	3	11	311	1	334	1.97e-103	312
MS.gene68084.t1	MTR_4g056030	57.475	301	124	3	11	311	1	297	1.36e-102	309
MS.gene68084.t1	MTR_4g055580	52.959	338	119	4	10	311	91	424	5.72e-102	311
MS.gene68084.t1	MTR_1g038710	56.151	317	129	5	1	311	1	313	3.37e-101	305
MS.gene68084.t1	MTR_4g093690	57.244	283	105	10	1	278	1	272	3.23e-84	255
MS.gene68084.t1	MTR_1g090900	70.000	180	50	3	11	188	1	178	1.96e-82	248
MS.gene68084.t1	MTR_7g110920	44.608	204	73	4	110	311	1	166	1.42e-38	139
MS.gene68084.t1	MTR_4g056010	67.021	94	29	1	84	177	6	97	1.39e-32	117
MS.gene68084.t1	MTR_5g084070	32.581	310	172	15	16	314	10	293	1.75e-18	85.9
MS.gene68084.t1	MTR_8g445780	30.284	317	188	12	2	308	3	296	1.38e-17	83.2
MS.gene68084.t1	MTR_5g080710	33.013	312	172	14	17	314	31	319	2.80e-17	82.4
MS.gene68084.t1	MTR_8g014260	28.485	330	194	12	1	308	1	310	1.74e-16	80.1
MS.gene68084.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	4.29e-16	78.2
MS.gene68084.t1	MTR_8g468810	28.024	339	209	11	1	322	1	321	4.36e-16	78.2
MS.gene68084.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	5.50e-16	78.2
MS.gene68084.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	7.16e-16	78.6
MS.gene68084.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	7.28e-16	77.8
MS.gene68084.t1	MTR_7g007080	30.846	201	115	6	17	206	2	189	2.95e-15	76.3
MS.gene68084.t1	MTR_2g005990	30.288	208	122	7	19	211	6	205	3.65e-15	75.9
MS.gene68084.t1	MTR_1g041245	28.383	303	179	11	19	305	11	291	2.70e-14	73.2
MS.gene68084.t1	MTR_1g085120	28.030	264	160	7	14	263	174	421	4.38e-14	73.2
MS.gene68084.t1	MTR_1g085120	28.030	264	160	7	14	263	162	409	5.60e-14	72.8
MS.gene68084.t1	MTR_4g039440	33.333	201	107	11	19	211	34	215	6.61e-14	72.4
MS.gene68084.t1	MTR_1g085120	28.030	264	160	7	14	263	87	334	6.97e-14	72.4
MS.gene68084.t1	MTR_7g032380	31.343	201	127	4	19	217	11	202	2.40e-13	70.5
MS.gene68084.t1	MTR_8g467800	28.239	301	192	8	19	308	20	307	2.88e-13	70.1
MS.gene68084.t1	MTR_7g055943	30.093	216	126	8	13	221	34	231	3.55e-13	70.1
MS.gene68084.t1	MTR_6g011460	29.680	219	123	7	14	222	41	238	4.60e-13	69.7
MS.gene68084.t1	MTR_1g066830	32.308	195	109	7	19	205	8	187	5.55e-13	69.3
MS.gene68084.t1	MTR_4g024780	26.875	320	210	10	17	323	144	452	7.26e-13	69.3
MS.gene68084.t1	MTR_7g075820	31.081	222	112	7	19	212	6	214	8.19e-13	68.9
MS.gene68084.t1	MTR_8g467800	28.571	301	191	9	19	308	20	307	9.65e-13	68.9
MS.gene68084.t1	MTR_8g062270	27.389	314	197	11	19	314	16	316	9.84e-13	68.9
MS.gene68084.t1	MTR_3g107100	29.353	201	128	5	15	211	7	197	1.77e-12	68.2
MS.gene68084.t1	MTR_7g056447	31.579	209	121	7	14	215	4	197	1.87e-12	67.0
MS.gene68084.t1	MTR_6g022360	30.374	214	105	8	13	210	37	222	2.14e-12	67.8
MS.gene68084.t1	MTR_4g080590	29.258	229	141	7	16	237	20	234	2.81e-12	67.4
MS.gene68084.t1	MTR_4g080590	28.512	242	152	7	16	250	20	247	2.88e-12	67.4
MS.gene68084.t1	MTR_7g034115	31.818	220	123	9	19	228	11	213	2.92e-12	67.4
MS.gene68084.t1	MTR_2g007450	29.825	228	133	6	5	212	2	222	4.64e-12	66.6
MS.gene68084.t1	MTR_3g108560	32.178	202	110	9	16	211	17	197	4.65e-12	66.2
MS.gene68084.t1	MTR_3g108560	32.178	202	110	9	16	211	17	197	6.92e-12	66.2
MS.gene68084.t1	MTR_7g110910	64.583	48	17	0	1	48	148	195	7.03e-12	63.9
MS.gene68084.t1	MTR_1g108820	29.851	201	122	7	19	215	8	193	9.62e-12	65.9
MS.gene68084.t1	MTR_1g108820	29.648	199	123	7	19	214	8	192	1.09e-11	65.5
MS.gene68084.t1	MTR_3g463820	56.604	53	23	0	9	61	3	55	1.10e-11	64.7
MS.gene68084.t1	MTR_7g115270	32.683	205	118	8	14	205	2	199	1.58e-11	65.1
MS.gene68084.t1	MTR_0492s0020	31.000	200	111	9	19	212	86	264	2.04e-11	64.7
MS.gene68084.t1	MTR_8g085430	30.435	207	112	6	15	205	7	197	2.06e-11	64.3
MS.gene68084.t1	MTR_2g007400	28.094	299	161	12	19	293	12	280	2.10e-11	64.7
MS.gene68084.t1	MTR_4g032730	26.852	324	194	12	2	306	3	302	2.22e-11	64.7
MS.gene68084.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	2.29e-11	64.3
MS.gene68084.t1	MTR_0543s0010	31.000	200	111	9	19	212	86	264	2.44e-11	64.7
MS.gene68084.t1	MTR_1g107385	31.183	279	157	12	19	273	32	299	2.60e-11	64.7
MS.gene68084.t1	MTR_8g468840	24.749	299	201	8	18	302	13	301	2.90e-11	64.3
MS.gene68084.t1	MTR_4g024680	29.648	199	101	9	17	210	520	684	4.01e-11	64.3
MS.gene68084.t1	MTR_1g053025	28.846	208	122	8	19	212	2	197	4.05e-11	63.9
MS.gene68084.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	4.48e-11	63.9
MS.gene68084.t1	MTR_6g022500	27.586	232	128	7	15	229	97	305	5.39e-11	63.5
MS.gene68084.t1	MTR_7g098570	28.502	207	136	4	1	205	2	198	6.77e-11	63.5
MS.gene68084.t1	MTR_1g077420	26.705	176	124	4	17	190	2	174	6.88e-11	62.4
MS.gene68084.t1	MTR_7g056287	28.934	197	117	6	19	206	3	185	7.83e-11	62.8
MS.gene68084.t1	MTR_2g007500	28.899	218	126	7	19	229	14	209	9.22e-11	62.4
MS.gene68084.t1	MTR_2g008320	28.374	289	165	11	19	293	52	312	9.90e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68084.t1	AT4G00320	28.182	330	197	10	13	311	7	327	7.90e-21	93.2
MS.gene68084.t1	AT4G00315	29.870	308	176	12	19	304	2	291	8.37e-21	92.8
MS.gene68084.t1	AT1G55660	33.597	253	136	11	19	257	53	287	9.12e-21	92.0
MS.gene68084.t1	AT1G55660	33.597	253	136	11	19	257	53	287	1.50e-20	92.4
MS.gene68084.t1	AT5G41840	26.225	347	205	8	7	311	2	339	4.66e-20	91.3
MS.gene68084.t1	AT5G41830	28.972	321	188	10	13	302	7	318	7.36e-20	90.5
MS.gene68084.t1	AT3G59230	31.071	280	160	9	18	278	11	276	7.50e-20	90.5
MS.gene68084.t1	AT3G59200	28.743	334	177	14	18	311	6	318	1.23e-19	89.0
MS.gene68084.t1	AT4G14103	27.937	315	194	10	18	311	7	309	1.89e-19	88.6
MS.gene68084.t1	AT4G14103	27.937	315	194	10	18	311	7	309	1.89e-19	88.6
MS.gene68084.t1	AT3G59200	28.743	334	177	14	18	311	6	318	3.13e-19	88.6
MS.gene68084.t1	AT4G14103	27.937	315	194	10	18	311	7	309	4.00e-19	87.8
MS.gene68084.t1	AT1G51370	31.004	229	141	5	1	227	1	214	4.49e-19	87.0
MS.gene68084.t1	AT4G10400	29.276	304	180	11	19	312	2	280	8.64e-19	86.7
MS.gene68084.t1	AT4G10400	29.276	304	180	11	19	312	2	280	8.64e-19	86.7
MS.gene68084.t1	AT4G10400	29.276	304	180	11	19	312	2	280	8.64e-19	86.7
MS.gene68084.t1	AT3G59210	28.528	326	181	10	18	310	6	312	9.28e-19	87.0
MS.gene68084.t1	AT3G59210	28.528	326	181	10	18	310	6	312	9.28e-19	87.0
MS.gene68084.t1	AT3G59210	28.528	326	181	10	18	310	6	312	9.28e-19	87.0
MS.gene68084.t1	AT3G59210	28.528	326	181	10	18	310	6	312	9.28e-19	87.0
MS.gene68084.t1	AT3G59210	28.528	326	181	10	18	310	6	312	9.28e-19	87.0
MS.gene68084.t1	AT1G51370	31.004	229	141	5	1	227	1	214	1.04e-18	86.7
MS.gene68084.t1	AT1G51370	31.004	229	141	5	1	227	1	214	1.05e-18	86.7
MS.gene68084.t1	AT4G14096	27.742	310	194	9	18	311	7	302	1.48e-18	86.3
MS.gene68084.t1	AT4G14096	27.742	310	194	9	18	311	7	302	1.48e-18	86.3
MS.gene68084.t1	AT2G42730	28.963	328	179	14	18	313	4	309	1.49e-18	86.3
MS.gene68084.t1	AT4G26340	29.210	291	182	10	19	304	2	273	3.87e-18	85.1
MS.gene68084.t1	AT2G42720	29.874	318	184	14	19	313	2	303	4.24e-18	85.1
MS.gene68084.t1	AT5G44490	29.787	329	187	15	1	305	1	309	5.61e-18	84.7
MS.gene68084.t1	AT5G44490	29.787	329	187	15	1	305	1	309	5.82e-18	84.7
MS.gene68084.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.12e-17	82.0
MS.gene68084.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.12e-17	82.0
MS.gene68084.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.12e-17	82.0
MS.gene68084.t1	AT4G09920	29.568	301	180	12	19	307	2	282	2.98e-17	81.3
MS.gene68084.t1	AT4G09920	29.568	301	180	12	19	307	2	282	2.98e-17	81.3
MS.gene68084.t1	AT3G59190	26.852	324	196	9	18	311	11	323	3.90e-17	81.6
MS.gene68084.t1	AT3G59190	26.852	324	196	9	18	311	11	323	4.15e-17	82.4
MS.gene68084.t1	AT3G50710	30.078	256	145	8	19	258	2	239	6.54e-17	81.3
MS.gene68084.t1	AT5G56370	31.452	248	141	8	19	257	2	229	7.63e-17	81.3
MS.gene68084.t1	AT5G56370	31.452	248	141	8	19	257	2	229	7.63e-17	81.3
MS.gene68084.t1	AT5G56370	31.048	248	142	8	19	257	2	229	7.87e-17	80.1
MS.gene68084.t1	AT5G53635	29.167	312	180	11	21	311	2	293	1.05e-16	80.9
MS.gene68084.t1	AT3G42770	30.164	305	178	12	24	309	4	292	1.08e-16	81.3
MS.gene68084.t1	AT5G44950	27.607	326	186	18	18	316	3	305	1.27e-16	80.5
MS.gene68084.t1	AT2G29910	27.523	327	191	11	18	313	4	315	5.40e-16	78.2
MS.gene68084.t1	AT2G29910	27.523	327	191	11	18	313	4	315	5.40e-16	78.2
MS.gene68084.t1	AT2G29910	27.523	327	191	11	18	313	4	315	5.40e-16	78.2
MS.gene68084.t1	AT2G29910	27.523	327	191	11	18	313	4	315	5.40e-16	78.2
MS.gene68084.t1	AT2G29910	27.523	327	191	11	18	313	28	339	5.92e-16	78.2
MS.gene68084.t1	AT2G29910	27.190	331	195	11	18	317	4	319	6.47e-16	77.8
MS.gene68084.t1	AT2G29910	27.190	331	195	11	18	317	4	319	6.47e-16	77.8
MS.gene68084.t1	AT5G60610	31.126	302	158	14	19	304	2	269	7.16e-16	78.2
MS.gene68084.t1	AT5G60610	31.126	302	158	14	19	304	2	269	7.16e-16	78.2
MS.gene68084.t1	AT3G58860	29.276	304	178	11	15	300	3	287	8.64e-16	78.2
MS.gene68084.t1	AT5G62970	30.675	326	163	14	19	307	2	301	9.36e-16	78.2
MS.gene68084.t1	AT2G26860	32.680	306	157	17	19	304	2	278	1.17e-15	77.4
MS.gene68084.t1	AT2G26860	32.680	306	157	17	19	304	2	278	1.17e-15	77.4
MS.gene68084.t1	AT5G53840	27.483	302	194	8	15	309	14	297	1.52e-15	77.4
MS.gene68084.t1	AT5G56420	31.020	245	153	8	18	257	5	238	1.60e-15	77.4
MS.gene68084.t1	AT5G56420	31.020	245	153	8	18	257	5	238	1.60e-15	77.4
MS.gene68084.t1	AT5G56420	31.020	245	153	8	18	257	5	238	1.60e-15	77.4
MS.gene68084.t1	AT5G56380	29.236	301	172	9	19	293	2	287	3.09e-15	76.6
MS.gene68084.t1	AT5G56380	29.236	301	172	9	19	293	2	287	3.09e-15	76.6
MS.gene68084.t1	AT4G22280	32.069	290	173	10	19	302	2	273	3.29e-15	75.9
MS.gene68084.t1	AT4G22280	32.069	290	173	10	19	302	2	273	3.92e-15	75.9
MS.gene68084.t1	AT1G58310	27.353	340	192	12	15	311	4	331	1.14e-14	75.1
MS.gene68084.t1	AT3G58960	27.742	310	189	11	19	305	2	299	1.30e-14	74.7
MS.gene68084.t1	AT5G22670	33.333	255	134	11	18	257	10	243	2.26e-14	73.9
MS.gene68084.t1	AT4G13960	28.882	322	182	11	19	311	2	305	3.22e-14	73.6
MS.gene68084.t1	AT4G13960	28.882	322	182	11	19	311	2	305	3.22e-14	73.6
MS.gene68084.t1	AT3G60040	29.141	326	185	15	18	314	229	537	3.88e-14	73.6
MS.gene68084.t1	AT3G60040	29.141	326	185	15	18	314	231	539	4.34e-14	73.6
MS.gene68084.t1	AT3G60040	29.141	326	185	15	18	314	231	539	4.46e-14	73.6
MS.gene68084.t1	AT2G26030	31.439	264	128	13	19	257	4	239	4.64e-14	72.8
MS.gene68084.t1	AT2G26030	31.439	264	128	13	19	257	4	239	4.64e-14	72.8
MS.gene68084.t1	AT3G60040	29.141	326	185	15	18	314	232	540	4.71e-14	73.6
MS.gene68084.t1	AT5G53640	32.212	208	116	10	6	205	5	195	4.73e-14	70.9
MS.gene68084.t1	AT2G26030	31.439	264	128	13	19	257	4	239	4.78e-14	72.8
MS.gene68084.t1	AT3G60040	29.141	326	185	15	18	314	12	320	4.88e-14	73.2
MS.gene68084.t1	AT3G58880	27.187	320	190	9	19	311	3	306	4.91e-14	72.8
MS.gene68084.t1	AT5G38590	27.986	293	183	12	19	304	2	273	1.48e-13	70.5
MS.gene68084.t1	AT3G58900	27.523	327	192	11	19	313	2	315	2.11e-13	70.5
MS.gene68084.t1	AT3G58900	27.523	327	192	11	19	313	2	315	2.11e-13	70.5
MS.gene68084.t1	AT3G59250	27.393	303	171	8	18	309	6	270	2.16e-13	70.9
MS.gene68084.t1	AT5G22700	28.037	321	187	13	15	311	2	302	2.19e-13	70.9
MS.gene68084.t1	AT5G22700	28.037	321	187	13	15	311	2	302	2.19e-13	70.9
MS.gene68084.t1	AT5G22700	28.037	321	187	13	15	311	2	302	2.19e-13	70.9
MS.gene68084.t1	AT5G22700	28.037	321	187	13	15	311	2	302	2.19e-13	70.9
MS.gene68084.t1	AT1G66290	26.562	320	194	10	14	313	24	322	2.35e-13	70.9
MS.gene68084.t1	AT5G38590	27.986	293	183	12	19	304	2	273	2.96e-13	70.5
MS.gene68084.t1	AT5G22730	27.600	250	160	6	19	257	28	267	3.07e-13	70.5
MS.gene68084.t1	AT5G22730	27.600	250	160	6	19	257	28	267	3.07e-13	70.5
MS.gene68084.t1	AT5G22730	27.600	250	160	6	19	257	28	267	3.07e-13	70.1
MS.gene68084.t1	AT3G49150	24.923	325	207	10	9	311	6	315	3.16e-13	70.5
MS.gene68084.t1	AT3G58900	27.692	325	190	11	19	311	2	313	3.67e-13	69.3
MS.gene68084.t1	AT5G38396	27.879	330	182	10	19	311	2	312	3.90e-13	70.1
MS.gene68084.t1	AT5G22700	28.037	321	187	13	15	311	39	339	4.06e-13	70.1
MS.gene68084.t1	AT3G58900	27.692	325	190	11	19	311	2	313	4.84e-13	70.1
MS.gene68084.t1	AT4G15060	27.744	328	195	16	16	323	23	328	4.87e-13	69.7
MS.gene68084.t1	AT3G44810	27.946	297	190	8	21	302	9	296	8.56e-13	69.3
MS.gene68084.t1	AT3G44060	28.710	310	172	17	24	309	4	288	8.62e-13	68.9
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	8.65e-13	68.6
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	8.65e-13	68.6
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	1.68e-12	68.2
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	1.68e-12	68.2
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	1.68e-12	68.2
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	1.68e-12	68.2
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	20	315	1.93e-12	67.8
MS.gene68084.t1	AT1G06630	27.389	314	193	13	18	314	11	306	1.93e-12	68.2
MS.gene68084.t1	AT5G56820	29.221	308	152	13	19	300	15	282	2.97e-12	67.4
MS.gene68084.t1	AT4G15060	27.778	306	180	15	19	304	172	456	3.14e-12	67.8
MS.gene68084.t1	AT2G04230	31.373	255	139	12	19	255	13	249	3.43e-12	67.4
MS.gene68084.t1	AT1G06630	27.331	311	191	13	18	311	11	303	3.46e-12	66.6
MS.gene68084.t1	AT4G13985	24.332	337	217	10	1	313	1	323	3.57e-12	67.4
MS.gene68084.t1	AT1G78760	24.437	311	204	7	17	311	14	309	4.19e-12	67.0
MS.gene68084.t1	AT5G22660	26.543	324	198	12	8	309	2	307	4.39e-12	66.2
MS.gene68084.t1	AT1G13780	26.019	319	195	11	19	309	10	315	4.58e-12	66.2
MS.gene68084.t1	AT5G18780	25.545	321	205	13	15	320	7	308	4.83e-12	66.6
MS.gene68084.t1	AT5G18780	25.545	321	205	13	15	320	7	308	4.83e-12	66.6
MS.gene68084.t1	AT2G29930	28.344	314	183	15	18	311	11	302	5.59e-12	66.6
MS.gene68084.t1	AT2G29930	28.344	314	183	15	18	311	11	302	5.59e-12	66.6
MS.gene68084.t1	AT1G13780	26.019	319	195	11	19	309	10	315	5.81e-12	66.6
MS.gene68084.t1	AT1G16930	25.079	315	193	11	19	311	15	308	6.40e-12	66.6
MS.gene68084.t1	AT1G16930	25.079	315	193	11	19	311	15	308	6.40e-12	66.6
MS.gene68084.t1	AT1G16930	25.079	315	193	11	19	311	15	308	6.40e-12	66.6
MS.gene68084.t1	AT5G25860	24.923	325	206	12	18	315	11	324	7.81e-12	66.2
MS.gene68084.t1	AT5G18780	25.545	321	205	13	15	320	7	308	8.67e-12	66.2
MS.gene68084.t1	AT5G18780	25.545	321	205	13	15	320	7	308	8.67e-12	66.2
MS.gene68084.t1	AT3G03040	25.617	324	197	8	19	311	2	312	9.09e-12	66.2
MS.gene68084.t1	AT5G22660	26.543	324	202	12	8	311	2	309	9.58e-12	65.9
MS.gene68084.t1	AT1G69630	27.410	332	207	12	1	313	1	317	1.45e-11	65.5
MS.gene68084.t1	AT1G52650	26.462	325	187	11	19	311	2	306	1.81e-11	65.1
MS.gene68084.t1	AT3G26922	26.974	304	197	12	17	314	12	296	1.95e-11	64.3
MS.gene68084.t1	AT3G26922	26.974	304	197	12	17	314	12	296	1.95e-11	64.3
MS.gene68084.t1	AT3G51530	28.213	319	200	13	1	313	14	309	1.98e-11	65.1
MS.gene68084.t1	AT3G59150	26.979	341	200	16	3	315	2	321	2.13e-11	65.1
MS.gene68084.t1	AT5G22720	26.994	326	198	10	1	300	1	312	2.52e-11	64.7
MS.gene68084.t1	AT5G22700	31.556	225	126	9	19	233	43	249	2.54e-11	64.7
MS.gene68084.t1	AT5G41630	29.048	210	123	4	15	208	8	207	2.65e-11	64.7
MS.gene68084.t1	AT3G59240	25.987	304	194	10	18	302	7	298	3.37e-11	64.3
MS.gene68084.t1	AT1G32020	31.429	140	84	5	19	152	4	137	4.87e-11	61.2
MS.gene68084.t1	AT1G66300	24.534	322	202	9	14	313	24	326	5.55e-11	63.5

Find 58 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATATAGATTGGATTGTTTC+AGG	0.217974	1.1:-66550066	None:intergenic
AATCATATGATGTACACTTA+TGG	0.253540	1.1:+66550154	MS.gene68084:CDS
CACTGCTTTGGATTTCTTGT+TGG	0.255966	1.1:-66549854	None:intergenic
ATGACAAGATCCTCAAGTTT+TGG	0.275155	1.1:-66550989	None:intergenic
CGTCCGAGAGTTTGCTTAAT+CGG	0.301365	1.1:-66549900	None:intergenic
ATTGGAGCATGCCACTGCTT+TGG	0.337326	1.1:-66549866	None:intergenic
ATCATATGATGTACACTTAT+GGG	0.341061	1.1:+66550155	MS.gene68084:CDS
TAGAATTTAACACAATATAT+TGG	0.345355	1.1:-66550371	None:intergenic
TTAATATTGCTGATCTTTCA+AGG	0.361331	1.1:+66550601	MS.gene68084:CDS
CAATTTGTATTCACTCTTGA+AGG	0.377131	1.1:+66550704	MS.gene68084:CDS
AGCATTAGACCTCAAGGTTC+AGG	0.387883	1.1:+66550185	MS.gene68084:CDS
TAATCGGTCACGCTGTTCAT+TGG	0.410287	1.1:-66549884	None:intergenic
GGATTGTTTCAGGCGAGCTA+GGG	0.423410	1.1:-66550056	None:intergenic
GAATACAAATTGTTAACATC+TGG	0.424839	1.1:-66550693	None:intergenic
TGGATTGTTTCAGGCGAGCT+AGG	0.434320	1.1:-66550057	None:intergenic
TGTAATTTAAAGTCAAGGTC+GGG	0.438271	1.1:-66550018	None:intergenic
GTGAAAAGAGACAATATTGA+TGG	0.440058	1.1:-66550487	None:intergenic
CCTTGACTTTAAATTACAAA+AGG	0.440589	1.1:+66550023	MS.gene68084:CDS
GGAGAGATGCATATATAGAT+TGG	0.441384	1.1:-66550077	None:intergenic
GAGAGTAGCTTGATCAAGAT+TGG	0.441782	1.1:-66550655	None:intergenic
AGCCTAAGCGGCAATAAAGT+TGG	0.465701	1.1:-66550243	None:intergenic
AAAGTCAAGGTCGGGGATCA+TGG	0.471876	1.1:-66550010	None:intergenic
GTCCAACTTTATTGCCGCTT+AGG	0.483228	1.1:+66550241	MS.gene68084:CDS
CAGCAATATTAAGAACTTCA+AGG	0.487952	1.1:-66550590	None:intergenic
ATAAGTGTACATCATATGAT+TGG	0.497079	1.1:-66550152	None:intergenic
TTCAAAAGCATTAGACCTCA+AGG	0.503454	1.1:+66550179	MS.gene68084:CDS
GTCGGGGATCATGGTGCAGA+TGG	0.509229	1.1:-66550001	None:intergenic
CATGTGTTCTATCCACAAGA+TGG	0.520664	1.1:+66549974	MS.gene68084:CDS
AATTTGTATTCACTCTTGAA+GGG	0.522877	1.1:+66550705	MS.gene68084:CDS
ATCTCGTTGTCCACATCTTG+AGG	0.524833	1.1:+66550434	MS.gene68084:CDS
TTGTAATTTAAAGTCAAGGT+CGG	0.538688	1.1:-66550019	None:intergenic
CTAAAGCTCTTTAGTGACAA+TGG	0.542283	1.1:+66550126	MS.gene68084:CDS
AGATGAAGAATCTTTAGTGA+TGG	0.548858	1.1:-66550348	None:intergenic
GATTGTTTCAGGCGAGCTAG+GGG	0.551052	1.1:-66550055	None:intergenic
TTGTTTCAGGCGAGCTAGGG+GGG	0.555730	1.1:-66550053	None:intergenic
TCACAAGAAGAACTGAGTCT+TGG	0.568698	1.1:-66550315	None:intergenic
ATAAAGTTGGACGTTTGTCA+AGG	0.572353	1.1:-66550230	None:intergenic
GACGGAACATTAATTTGCAG+TGG	0.572866	1.1:-66550567	None:intergenic
AGCAATATTAAGAACTTCAA+GGG	0.574759	1.1:-66550589	None:intergenic
ATGTGTTCTATCCACAAGAT+GGG	0.579779	1.1:+66549975	MS.gene68084:CDS
AGGAACTTGACGTGGAATGT+TGG	0.588805	1.1:+66550205	MS.gene68084:CDS
ACAAAATGCTCCAAAACTTG+AGG	0.589127	1.1:+66550979	MS.gene68084:CDS
GTAATTTAAAGTCAAGGTCG+GGG	0.598235	1.1:-66550017	None:intergenic
TAAAGTTGGACGTTTGTCAA+GGG	0.603334	1.1:-66550229	None:intergenic
CAAGGTTCAGGAACTTGACG+TGG	0.605052	1.1:+66550197	MS.gene68084:CDS
AAGAGAAATTCCTCAAGATG+TGG	0.606892	1.1:-66550444	None:intergenic
ATTGTTTCAGGCGAGCTAGG+GGG	0.607411	1.1:-66550054	None:intergenic
CTCGTGGTCTTAAAATTGCA+CGG	0.608869	1.1:+66550282	MS.gene68084:CDS
CATCTGGTTGCTCATTAAAG+CGG	0.610186	1.1:-66550677	None:intergenic
TTCCATGTCTAAGTCGCTCG+TGG	0.617485	1.1:+66550266	MS.gene68084:CDS
TGACCGATTAAGCAAACTCT+CGG	0.617679	1.1:+66549897	MS.gene68084:CDS
GACCACGAGCGACTTAGACA+TGG	0.625420	1.1:-66550268	None:intergenic
GAAACGTAAGAATCAAGAAG+AGG	0.628438	1.1:-66550543	None:intergenic
CGTCAAGTTCCTGAACCTTG+AGG	0.629391	1.1:-66550194	None:intergenic
GCAGATGGACTCCCATCTTG+TGG	0.639474	1.1:-66549986	None:intergenic
CAACAAGAAATCCAAAGCAG+TGG	0.641414	1.1:+66549855	MS.gene68084:CDS
ATATTAAGAACTTCAAGGGA+CGG	0.644409	1.1:-66550585	None:intergenic
TTAGACATGGAAAGCCTAAG+CGG	0.711604	1.1:-66550255	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TCACAATTTATTATTTTTAT+CGG	+	chr1.1:66550910-66550929	MS.gene68084:intron	10.0%
!!	TAGAATTTAACACAATATAT+TGG	-	chr1.1:66550374-66550393	None:intergenic	15.0%
!!!	CTTTAGTTTTCTTATGTTTT+CGG	-	chr1.1:66550112-66550131	None:intergenic	20.0%
!	AAATATATGAGAATTGCAGT+TGG	+	chr1.1:66550936-66550955	MS.gene68084:intron	25.0%
!	AATCATATGATGTACACTTA+TGG	+	chr1.1:66550154-66550173	MS.gene68084:CDS	25.0%
!	AATTTGTATTCACTCTTGAA+GGG	+	chr1.1:66550705-66550724	MS.gene68084:CDS	25.0%
!	AGCAATATTAAGAACTTCAA+GGG	-	chr1.1:66550592-66550611	None:intergenic	25.0%
!	ATAAGTGTACATCATATGAT+TGG	-	chr1.1:66550155-66550174	None:intergenic	25.0%
!	ATCATATGATGTACACTTAT+GGG	+	chr1.1:66550155-66550174	MS.gene68084:CDS	25.0%
!	CCTTGACTTTAAATTACAAA+AGG	+	chr1.1:66550023-66550042	MS.gene68084:CDS	25.0%
!	GAATACAAATTGTTAACATC+TGG	-	chr1.1:66550696-66550715	None:intergenic	25.0%
!	TATATAGATTGGATTGTTTC+AGG	-	chr1.1:66550069-66550088	None:intergenic	25.0%
!	TTAATATTGCTGATCTTTCA+AGG	+	chr1.1:66550601-66550620	MS.gene68084:CDS	25.0%
!!	TTGTAATTTAAAGTCAAGGT+CGG	-	chr1.1:66550022-66550041	None:intergenic	25.0%
!!!	CCTTTTGTAATTTAAAGTCA+AGG	-	chr1.1:66550026-66550045	None:intergenic	25.0%
	AGATGAAGAATCTTTAGTGA+TGG	-	chr1.1:66550351-66550370	None:intergenic	30.0%
	ATATTAAGAACTTCAAGGGA+CGG	-	chr1.1:66550588-66550607	None:intergenic	30.0%
	CAATTTGTATTCACTCTTGA+AGG	+	chr1.1:66550704-66550723	MS.gene68084:CDS	30.0%
	CAGCAATATTAAGAACTTCA+AGG	-	chr1.1:66550593-66550612	None:intergenic	30.0%
	GTGAAAAGAGACAATATTGA+TGG	-	chr1.1:66550490-66550509	None:intergenic	30.0%
!	TGTAAGCTTCTTTTGTTGAT+AGG	-	chr1.1:66549951-66549970	None:intergenic	30.0%
!	TGTAATTTAAAGTCAAGGTC+GGG	-	chr1.1:66550021-66550040	None:intergenic	30.0%
!!!	TTTTGGAGCATTTTGTAGAA+AGG	-	chr1.1:66550975-66550994	None:intergenic	30.0%
	AAGAGAAATTCCTCAAGATG+TGG	-	chr1.1:66550447-66550466	None:intergenic	35.0%
	ATAAAGTTGGACGTTTGTCA+AGG	-	chr1.1:66550233-66550252	None:intergenic	35.0%
	ATGTGTTCTATCCACAAGAT+GGG	+	chr1.1:66549975-66549994	MS.gene68084:CDS	35.0%
	CTAAAGCTCTTTAGTGACAA+TGG	+	chr1.1:66550126-66550145	MS.gene68084:CDS	35.0%
	GAAACGTAAGAATCAAGAAG+AGG	-	chr1.1:66550546-66550565	None:intergenic	35.0%
	GGAGAGATGCATATATAGAT+TGG	-	chr1.1:66550080-66550099	None:intergenic	35.0%
	TAAAGTTGGACGTTTGTCAA+GGG	-	chr1.1:66550232-66550251	None:intergenic	35.0%
	TGTGAAAAGTGAGAAGATGT+AGG	-	chr1.1:66550895-66550914	None:intergenic	35.0%
!	GTAATTTAAAGTCAAGGTCG+GGG	-	chr1.1:66550020-66550039	None:intergenic	35.0%
!!	TTCAAAAGCATTAGACCTCA+AGG	+	chr1.1:66550179-66550198	MS.gene68084:CDS	35.0%
	AAGTGCATGTGTCGTAGTTA+TGG	-	chr1.1:66550830-66550849	None:intergenic	40.0%
	CAACAAGAAATCCAAAGCAG+TGG	+	chr1.1:66549855-66549874	MS.gene68084:CDS	40.0%
	CATCTGGTTGCTCATTAAAG+CGG	-	chr1.1:66550680-66550699	None:intergenic	40.0%
	CATGTGTTCTATCCACAAGA+TGG	+	chr1.1:66549974-66549993	MS.gene68084:CDS	40.0%
	GAGAGTAGCTTGATCAAGAT+TGG	-	chr1.1:66550658-66550677	None:intergenic	40.0%
	TCACAAGAAGAACTGAGTCT+TGG	-	chr1.1:66550318-66550337	None:intergenic	40.0%
	TGACCGATTAAGCAAACTCT+CGG	+	chr1.1:66549897-66549916	MS.gene68084:CDS	40.0%
	TTAGACATGGAAAGCCTAAG+CGG	-	chr1.1:66550258-66550277	None:intergenic	40.0%
!	ACTACGACACATGCACTTTT+TGG	+	chr1.1:66550832-66550851	MS.gene68084:intron	40.0%
!	CACTGCTTTGGATTTCTTGT+TGG	-	chr1.1:66549857-66549876	None:intergenic	40.0%
!	CTCGTGGTCTTAAAATTGCA+CGG	+	chr1.1:66550282-66550301	MS.gene68084:CDS	40.0%
!!	GACGGAACATTAATTTGCAG+TGG	-	chr1.1:66550570-66550589	None:intergenic	40.0%
	AGCATTAGACCTCAAGGTTC+AGG	+	chr1.1:66550185-66550204	MS.gene68084:CDS	45.0%
	AGCCTAAGCGGCAATAAAGT+TGG	-	chr1.1:66550246-66550265	None:intergenic	45.0%
	AGGAACTTGACGTGGAATGT+TGG	+	chr1.1:66550205-66550224	MS.gene68084:CDS	45.0%
	ATCTCGTTGTCCACATCTTG+AGG	+	chr1.1:66550434-66550453	MS.gene68084:CDS	45.0%
	GGTTATGCAGCATCTAAGCA+AGG	+	chr1.1:66550853-66550872	MS.gene68084:intron	45.0%
	TAATCGGTCACGCTGTTCAT+TGG	-	chr1.1:66549887-66549906	None:intergenic	45.0%
	TATGCAGCATCTAAGCAAGG+AGG	+	chr1.1:66550856-66550875	MS.gene68084:intron	45.0%
!	CGTCCGAGAGTTTGCTTAAT+CGG	-	chr1.1:66549903-66549922	None:intergenic	45.0%
!	GTCCAACTTTATTGCCGCTT+AGG	+	chr1.1:66550241-66550260	MS.gene68084:CDS	45.0%
!!	TTATGTTTTCGGTGCGTCTC+AGG	-	chr1.1:66550101-66550120	None:intergenic	45.0%
	AAAGTCAAGGTCGGGGATCA+TGG	-	chr1.1:66550013-66550032	None:intergenic	50.0%
	ATTGGAGCATGCCACTGCTT+TGG	-	chr1.1:66549869-66549888	None:intergenic	50.0%
	ATTGTTTCAGGCGAGCTAGG+GGG	-	chr1.1:66550057-66550076	None:intergenic	50.0%
	CAAGGTTCAGGAACTTGACG+TGG	+	chr1.1:66550197-66550216	MS.gene68084:CDS	50.0%
	CGTCAAGTTCCTGAACCTTG+AGG	-	chr1.1:66550197-66550216	None:intergenic	50.0%
	GATTGTTTCAGGCGAGCTAG+GGG	-	chr1.1:66550058-66550077	None:intergenic	50.0%
	GGATTGTTTCAGGCGAGCTA+GGG	-	chr1.1:66550059-66550078	None:intergenic	50.0%
	TGGATTGTTTCAGGCGAGCT+AGG	-	chr1.1:66550060-66550079	None:intergenic	50.0%
	TTCCATGTCTAAGTCGCTCG+TGG	+	chr1.1:66550266-66550285	MS.gene68084:CDS	50.0%
	GACCACGAGCGACTTAGACA+TGG	-	chr1.1:66550271-66550290	None:intergenic	55.0%
	TTGTTTCAGGCGAGCTAGGG+GGG	-	chr1.1:66550056-66550075	None:intergenic	55.0%
!	GCAGATGGACTCCCATCTTG+TGG	-	chr1.1:66549989-66550008	None:intergenic	55.0%
	GTCGGGGATCATGGTGCAGA+TGG	-	chr1.1:66550004-66550023	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	66549844	66550999	66549844	ID=MS.gene68084
chr1.1	mRNA	66549844	66550999	66549844	ID=MS.gene68084.t1;Parent=MS.gene68084
chr1.1	exon	66549844	66550773	66549844	ID=MS.gene68084.t1.exon1;Parent=MS.gene68084.t1
chr1.1	CDS	66549844	66550773	66549844	ID=cds.MS.gene68084.t1;Parent=MS.gene68084.t1
chr1.1	exon	66550955	66550999	66550955	ID=MS.gene68084.t1.exon2;Parent=MS.gene68084.t1
chr1.1	CDS	66550955	66550999	66550955	ID=cds.MS.gene68084.t1;Parent=MS.gene68084.t1

Gene Sequence

>MS.gene68084

ATGGAGGAAGCCAACAAGAAATCCAAAGCAGTGGCATGCTCCAATGAACAGCGTGACCGATTAAGCAAACTCTCGGACGAATTGATTCTTCGTATTCTGTCTTTCCTATCAACAAAAGAAGCTTACAAAACATGTGTTCTATCCACAAGATGGGAGTCCATCTGCACCATGATCCCCGACCTTGACTTTAAATTACAAAAGGTTTCAGACCCCCCTAGCTCGCCTGAAACAATCCAATCTATATATGCATCTCTCCTGAGACGCACCGAAAACATAAGAAAACTAAAGCTCTTTAGTGACAATGGCTGCCAATCATATGATGTACACTTATGGGTTTCAAAAGCATTAGACCTCAAGGTTCAGGAACTTGACGTGGAATGTTGGTCCCTTGACAAACGTCCAACTTTATTGCCGCTTAGGCTTTCCATGTCTAAGTCGCTCGTGGTCTTAAAATTGCACGGTGAAGCTCAGCCAAGACTCAGTTCTTCTTGTGATGTATCTTTTCCATCACTAAAGATTCTTCATCTCCAATATATTGTGTTAAATTCTATCATAGATAATCATAGTGAGTATGATCTCTCTGAATTTCTATCTCGTTGTCCACATCTTGAGGAATTTCTCTTACATGACGTCTTCAAACAAGCCATCAATATTGTCTCTTTTCACTCATTAAAGAGATTAATATTTCTTTTAGAGACGCCTCTTCTTGATTCTTACGTTTCTCCACTGCAAATTAATGTTCCGTCCCTTGAAGTTCTTAATATTGCTGATCTTTCAAGGACTCACAAAAAATACGAGCTTATAAACTTGTCCAATCTTGATCAAGCTACTCTCCGCTTTAATGAGCAACCAGATGTTAACAATTTGTATTCACTCTTGAAGGGAGTTTCTAATGTCAAATCATTGACTGTCAATTATGAAACTATTCATGTAAGTTTCATTTTTTTATTCTTTTTATTTTATTTTATTTTTTATGACAAGTTCCATAACTACGACACATGCACTTTTTGGTTATGCAGCATCTAAGCAAGGAGGAAAATCTTGACAACCTACATCTTCTCACTTTTCACAATTTATTATTTTTATCGGTTGAAATATATGAGAATTGCAGTTGGAATATGCTCGTTACCTTTCTACAAAATGCTCCAAAACTTGA

Protein sequence

>MS.gene68084.t1

MEEANKKSKAVACSNEQRDRLSKLSDELILRILSFLSTKEAYKTCVLSTRWESICTMIPDLDFKLQKVSDPPSSPETIQSIYASLLRRTENIRKLKLFSDNGCQSYDVHLWVSKALDLKVQELDVECWSLDKRPTLLPLRLSMSKSLVVLKLHGEAQPRLSSSCDVSFPSLKILHLQYIVLNSIIDNHSEYDLSEFLSRCPHLEEFLLHDVFKQAINIVSFHSLKRLIFLLETPLLDSYVSPLQINVPSLEVLNIADLSRTHKKYELINLSNLDQATLRFNEQPDVNNLYSLLKGVSNVKSLTVNYETIHLEYARYLSTKCSKT