AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67914

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67914.t1 MTR_7g034115 80.130 307 56 2 1 307 74 375 3.29e-174 488
MS.gene67914.t1 MTR_1g041245 57.187 327 114 10 1 315 74 386 1.01e-108 322
MS.gene67914.t1 MTR_7g032380 55.882 306 102 5 10 315 84 356 1.47e-102 305
MS.gene67914.t1 MTR_7g032370 57.643 314 114 9 4 315 56 352 1.26e-100 300
MS.gene67914.t1 MTR_7g034120 48.916 323 142 10 1 315 1 308 1.08e-83 255
MS.gene67914.t1 MTR_7g033915 46.154 325 130 9 1 314 74 364 1.38e-78 244
MS.gene67914.t1 MTR_7g033990 47.352 321 136 10 1 307 74 375 1.88e-77 243
MS.gene67914.t1 MTR_8g085430 46.078 306 87 6 3 303 84 316 5.18e-70 221
MS.gene67914.t1 MTR_7g056433 42.902 317 159 11 10 315 84 389 1.59e-63 206
MS.gene67914.t1 MTR_7g115270 39.091 330 176 10 2 312 76 399 1.69e-59 196
MS.gene67914.t1 MTR_7g098510 37.764 331 170 12 1 315 81 391 1.74e-55 185
MS.gene67914.t1 MTR_3g036250 37.500 320 168 8 1 312 68 363 2.59e-53 179
MS.gene67914.t1 MTR_0543s0010 38.820 322 162 12 4 314 152 449 1.70e-51 176
MS.gene67914.t1 MTR_5g008920 37.460 315 172 8 10 315 83 381 3.27e-51 174
MS.gene67914.t1 MTR_7g098480 40.439 319 168 11 4 314 84 388 8.59e-51 175
MS.gene67914.t1 MTR_7g088260 37.994 329 170 14 1 315 154 462 1.05e-50 174
MS.gene67914.t1 MTR_7g098570 40.625 320 166 12 1 310 83 388 1.63e-50 174
MS.gene67914.t1 MTR_5g008950 38.415 328 170 13 1 315 57 365 4.46e-50 171
MS.gene67914.t1 MTR_5g013500 37.538 333 163 14 2 315 59 365 1.55e-49 169
MS.gene67914.t1 MTR_3g108150 38.820 322 172 10 4 314 79 386 7.99e-49 167
MS.gene67914.t1 MTR_5g012840 37.855 317 145 9 1 315 52 318 2.22e-48 164
MS.gene67914.t1 MTR_0492s0020 38.065 310 157 12 4 302 152 437 1.98e-46 162
MS.gene67914.t1 MTR_3g082890 37.059 340 177 10 1 315 157 484 4.95e-46 162
MS.gene67914.t1 MTR_3g087260 40.893 291 146 10 35 314 181 456 1.28e-44 158
MS.gene67914.t1 MTR_3g108560 36.810 326 174 12 1 314 83 388 1.42e-43 154
MS.gene67914.t1 MTR_3g040700 35.563 284 153 8 1 276 106 367 2.43e-43 154
MS.gene67914.t1 MTR_3g082890 34.218 377 174 11 1 315 77 441 3.82e-43 154
MS.gene67914.t1 MTR_7g056430 34.472 322 162 10 2 309 73 359 3.27e-40 150
MS.gene67914.t1 MTR_7g056420 34.472 322 162 10 2 309 73 359 3.58e-40 150
MS.gene67914.t1 MTR_7g056020 40.800 250 133 7 66 308 126 367 5.82e-39 145
MS.gene67914.t1 MTR_3g109982 40.541 259 135 10 60 308 220 469 1.16e-38 145
MS.gene67914.t1 MTR_3g105060 33.962 318 179 10 4 315 81 373 5.07e-38 139
MS.gene67914.t1 MTR_7g007080 32.628 331 182 11 1 313 70 377 2.90e-37 137
MS.gene67914.t1 MTR_5g007410 32.927 328 171 15 10 312 102 405 6.28e-34 129
MS.gene67914.t1 MTR_2g020180 48.936 141 57 4 177 315 88 215 7.72e-34 124
MS.gene67914.t1 MTR_3g467400 33.642 324 166 13 9 315 76 367 4.01e-33 125
MS.gene67914.t1 MTR_7g081290 47.552 143 67 5 176 315 119 256 7.78e-33 122
MS.gene67914.t1 MTR_7g114710 34.277 318 170 10 4 315 80 364 1.98e-32 124
MS.gene67914.t1 MTR_2g007450 31.897 348 176 16 10 315 93 421 1.40e-31 122
MS.gene67914.t1 MTR_6g045333 30.650 323 190 11 10 314 139 445 3.93e-31 121
MS.gene67914.t1 MTR_7g034110 34.314 306 153 10 1 305 74 332 1.00e-30 119
MS.gene67914.t1 MTR_3g023630 32.087 321 187 11 4 315 75 373 1.19e-30 119
MS.gene67914.t1 MTR_7g026500 31.250 320 192 10 9 314 89 394 1.57e-30 119
MS.gene67914.t1 MTR_3g107100 31.373 306 176 11 31 315 106 398 2.47e-30 119
MS.gene67914.t1 MTR_7g056277 32.492 317 181 14 8 314 334 627 1.69e-29 118
MS.gene67914.t1 MTR_7g056287 31.429 315 185 11 9 314 79 371 3.96e-29 115
MS.gene67914.t1 MTR_6g040270 29.560 318 188 13 10 313 84 379 6.19e-29 114
MS.gene67914.t1 MTR_2g007400 33.013 312 168 15 27 315 110 403 1.06e-28 114
MS.gene67914.t1 MTR_1089s0010 30.556 324 191 11 4 315 78 379 1.22e-28 114
MS.gene67914.t1 MTR_1g066830 29.755 326 185 15 10 314 84 386 1.69e-28 113
MS.gene67914.t1 MTR_5g073420 29.193 322 193 12 4 314 82 379 4.58e-27 109
MS.gene67914.t1 MTR_3g107160 31.058 293 177 9 31 315 108 383 5.13e-27 109
MS.gene67914.t1 MTR_3g115430 47.458 118 56 3 199 315 13 125 5.41e-27 103
MS.gene67914.t1 MTR_5g058000 29.874 318 185 12 9 314 83 374 1.17e-26 108
MS.gene67914.t1 MTR_1g107385 33.333 273 146 12 60 313 166 421 2.21e-26 108
MS.gene67914.t1 MTR_5g039470 31.597 288 158 11 10 279 61 327 4.43e-26 105
MS.gene67914.t1 MTR_5g083890 32.414 290 162 11 28 296 111 387 5.28e-26 107
MS.gene67914.t1 MTR_3g107120 31.562 320 178 12 10 312 93 388 7.30e-26 106
MS.gene67914.t1 MTR_1g085120 28.704 324 195 11 9 315 167 471 1.19e-25 106
MS.gene67914.t1 MTR_1g085120 28.704 324 195 11 9 315 242 546 2.02e-25 106
MS.gene67914.t1 MTR_5g058100 28.793 323 190 11 9 314 84 383 2.61e-25 104
MS.gene67914.t1 MTR_4g080610 37.247 247 125 13 85 314 123 356 4.05e-25 103
MS.gene67914.t1 MTR_5g045170 29.503 322 192 11 10 313 85 389 5.59e-25 103
MS.gene67914.t1 MTR_2g036470 30.060 336 186 11 4 314 84 395 6.67e-25 103
MS.gene67914.t1 MTR_5g073370 30.284 317 193 11 10 313 77 378 1.36e-24 102
MS.gene67914.t1 MTR_5g039450 32.271 251 129 9 80 312 128 355 2.52e-24 101
MS.gene67914.t1 MTR_3g107940 37.379 206 102 9 118 307 11 205 2.87e-24 101
MS.gene67914.t1 MTR_6g022500 29.814 322 190 17 9 315 176 476 2.95e-24 102
MS.gene67914.t1 MTR_1g108800 30.818 318 178 12 10 313 51 340 4.46e-24 100
MS.gene67914.t1 MTR_3g099830 32.326 331 181 15 4 313 64 372 2.18e-23 99.4
MS.gene67914.t1 MTR_3g071850 28.750 320 194 12 10 311 102 405 2.22e-23 100
MS.gene67914.t1 MTR_4g039440 28.488 344 191 15 1 315 95 412 2.39e-23 99.8
MS.gene67914.t1 MTR_1g108820 31.118 331 175 15 10 313 80 384 4.68e-23 98.6
MS.gene67914.t1 MTR_2g007360 31.022 274 154 11 64 313 110 372 9.56e-23 97.4
MS.gene67914.t1 MTR_5g031970 29.808 312 178 12 10 313 76 354 1.09e-22 97.1
MS.gene67914.t1 MTR_5g045510 28.840 319 176 12 10 313 88 370 2.10e-22 96.7
MS.gene67914.t1 MTR_7g075820 31.228 285 162 11 43 313 128 392 5.34e-22 95.5
MS.gene67914.t1 MTR_7g007340 33.333 270 147 12 52 309 103 351 7.32e-22 94.7
MS.gene67914.t1 MTR_7g056280 30.455 220 127 6 108 312 362 570 4.79e-21 94.0
MS.gene67914.t1 MTR_6g022520 28.916 332 198 13 1 314 1 312 1.22e-20 90.9
MS.gene67914.t1 MTR_7g083740 28.435 313 174 12 19 314 87 366 1.36e-20 91.3
MS.gene67914.t1 MTR_0009s0080 29.520 271 157 12 29 283 115 367 3.99e-20 90.5
MS.gene67914.t1 MTR_2g008310 29.781 319 171 15 26 315 77 371 4.05e-20 90.1
MS.gene67914.t1 MTR_7g055943 30.205 341 179 17 6 315 109 421 7.50e-20 89.7
MS.gene67914.t1 MTR_5g063950 27.711 332 179 11 9 312 61 359 8.48e-20 89.0
MS.gene67914.t1 MTR_2g005990 28.852 305 182 13 28 313 105 393 1.08e-19 89.0
MS.gene67914.t1 MTR_5g054920 32.836 201 114 7 110 299 3 193 1.93e-19 84.7
MS.gene67914.t1 MTR_7g060470 27.848 316 167 13 32 314 105 392 2.12e-19 88.2
MS.gene67914.t1 MTR_1g053025 26.059 307 177 10 31 312 105 386 4.81e-19 87.0
MS.gene67914.t1 MTR_3g108560 32.340 235 129 10 1 224 83 298 5.54e-19 85.9
MS.gene67914.t1 MTR_3g108140 50.000 86 42 1 230 314 62 147 8.87e-19 82.8
MS.gene67914.t1 MTR_1g043170 47.619 84 40 2 233 315 8 88 9.50e-19 79.7
MS.gene67914.t1 MTR_2g007550 37.143 140 69 4 175 312 210 332 1.01e-18 85.9
MS.gene67914.t1 MTR_2g007610 38.158 152 78 5 165 313 11 149 1.65e-18 81.6
MS.gene67914.t1 MTR_2g007090 33.193 238 117 10 87 314 88 293 2.76e-18 84.0
MS.gene67914.t1 MTR_4g096730 50.617 81 36 2 236 315 12 89 3.31e-18 79.0
MS.gene67914.t1 MTR_5g008910 31.356 236 122 10 110 315 77 302 5.09e-18 83.2
MS.gene67914.t1 MTR_2g008320 30.072 276 154 11 59 315 172 427 5.87e-18 84.3
MS.gene67914.t1 MTR_5g039490 30.201 298 151 12 31 314 121 375 1.66e-17 82.4
MS.gene67914.t1 MTR_7g021990 30.686 277 160 9 60 315 164 429 1.80e-17 82.8
MS.gene67914.t1 MTR_7g021950 30.686 277 160 9 60 315 164 429 2.32e-17 82.8
MS.gene67914.t1 MTR_7g033945 45.098 102 50 2 1 98 74 173 3.46e-17 78.2
MS.gene67914.t1 MTR_6g011460 28.198 344 177 15 4 315 116 421 5.74e-17 81.3
MS.gene67914.t1 MTR_6g022360 27.744 328 199 15 3 314 102 407 2.35e-16 79.3
MS.gene67914.t1 MTR_7g022105 28.968 252 161 6 60 297 165 412 3.80e-16 79.0
MS.gene67914.t1 MTR_8g077460 27.157 313 195 13 10 315 89 375 6.76e-16 77.8
MS.gene67914.t1 MTR_3g026920 27.536 276 140 11 60 312 164 402 7.75e-16 77.8
MS.gene67914.t1 MTR_5g061680 28.364 275 148 12 4 272 82 313 2.84e-15 75.5
MS.gene67914.t1 MTR_7g056447 38.525 122 64 3 2 121 73 185 3.66e-15 74.7
MS.gene67914.t1 MTR_3g095630 31.765 170 101 7 140 305 17 175 1.14e-14 71.6
MS.gene67914.t1 MTR_1377s0010 32.308 130 81 4 155 283 4 127 2.18e-14 69.7
MS.gene67914.t1 MTR_5g033200 30.769 169 98 6 140 301 12 168 5.40e-14 69.7
MS.gene67914.t1 MTR_3g110010 34.302 172 97 7 60 223 220 383 3.71e-13 70.5
MS.gene67914.t1 MTR_5g024060 31.818 132 80 4 176 305 75 198 3.76e-13 68.6
MS.gene67914.t1 MTR_6g029350 30.288 208 125 7 113 313 2 196 4.98e-13 68.2
MS.gene67914.t1 MTR_7g007370 31.780 236 137 8 59 282 93 316 4.99e-13 69.3
MS.gene67914.t1 MTR_3g113785 43.210 81 40 1 199 273 12 92 6.59e-13 64.3
MS.gene67914.t1 MTR_8g058965 26.190 378 195 14 10 315 91 456 7.16e-13 69.3
MS.gene67914.t1 MTR_7g034090 36.806 144 72 7 178 314 180 311 7.25e-13 68.9
MS.gene67914.t1 MTR_3g094980 40.476 84 47 1 203 283 34 117 1.28e-12 65.5
MS.gene67914.t1 MTR_8g014210 36.036 111 66 2 206 315 125 231 1.63e-12 66.2
MS.gene67914.t1 MTR_3g071790 27.869 183 110 7 110 277 27 202 1.99e-12 65.5
MS.gene67914.t1 MTR_8g058970 29.119 261 147 7 68 315 242 477 2.27e-12 67.8
MS.gene67914.t1 MTR_2g007500 29.008 262 144 11 27 263 91 335 2.60e-12 67.0
MS.gene67914.t1 MTR_8g062310 32.877 146 71 4 181 315 299 428 2.96e-12 67.4
MS.gene67914.t1 MTR_4g098590 29.054 296 159 12 27 294 95 367 5.76e-12 66.2
MS.gene67914.t1 MTR_8g062300 34.932 146 68 4 181 315 348 477 1.57e-11 65.1
MS.gene67914.t1 MTR_1g053050 39.759 83 46 1 230 312 34 112 4.11e-11 59.7
MS.gene67914.t1 MTR_8g469020 33.824 136 83 3 181 315 322 451 5.16e-11 63.5
MS.gene67914.t1 MTR_8g014160 28.148 270 167 9 58 315 171 425 6.23e-11 63.2
MS.gene67914.t1 MTR_4g093690 32.258 124 72 3 14 130 90 208 8.35e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67914.t1 AT3G52680 28.142 366 188 15 10 314 93 444 2.28e-21 94.4
MS.gene67914.t1 AT1G32375 25.272 368 194 13 10 315 74 422 9.96e-16 77.8
MS.gene67914.t1 AT1G32375 25.272 368 194 13 10 315 74 422 9.96e-16 77.8
MS.gene67914.t1 AT2G04230 28.212 358 169 16 28 315 107 446 5.39e-12 66.6
MS.gene67914.t1 AT4G26340 25.188 266 177 7 59 315 167 419 8.70e-12 65.9

Find 61 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGAACATGTTCACTTAT+AGG 0.172082 7.2:-63522576 MS.gene67914:CDS
CGAAGTTATCTCTGTGTCTA+AGG 0.263124 7.2:-63522431 MS.gene67914:CDS
CTCAAATGTGGCAACTCTTC+TGG 0.271485 7.2:-63523466 MS.gene67914:CDS
TTTAAGGATGAAGCGTTTAA+TGG 0.274868 7.2:-63523112 MS.gene67914:CDS
TCTGAAGCTTAGAACAGTTT+TGG 0.278609 7.2:+63522790 None:intergenic
ATGTTCTAAGCTCGGATAAA+AGG 0.286459 7.2:+63522589 None:intergenic
CTTACTCAAAACTCTTCATT+TGG 0.315836 7.2:-63523242 MS.gene67914:CDS
GTAGGAACTTGGTAACAATA+TGG 0.356388 7.2:+63522897 None:intergenic
TATTTCAACTTACAAATGAT+TGG 0.369456 7.2:-63522845 MS.gene67914:CDS
TTAGAGTATTTGAGAACATA+TGG 0.381970 7.2:-63523151 MS.gene67914:CDS
TGCTTTATATTGATATCAAC+CGG 0.404152 7.2:+63522465 None:intergenic
GAGATAACTTCGTAAGCATT+TGG 0.407043 7.2:+63522442 None:intergenic
CACATTTGAGTCGGAACGAC+TGG 0.410252 7.2:+63523479 None:intergenic
CAACTTACAAATGATTGGCT+TGG 0.414893 7.2:-63522840 MS.gene67914:CDS
AACTTACAAATGATTGGCTT+GGG 0.419642 7.2:-63522839 MS.gene67914:CDS
CAAATGATTGGCTTGGGAAG+TGG 0.422379 7.2:-63522833 MS.gene67914:CDS
TTTGAACATTCCATTTGCTT+GGG 0.422936 7.2:-63523047 MS.gene67914:CDS
ATGAAGTTGGTGATGGTGAT+TGG 0.433874 7.2:-63522638 MS.gene67914:intron
TGAGGTAAGTTAAAGAGAAC+AGG 0.455224 7.2:+63523346 None:intergenic
CATGCGAGTTAAATTAAGAA+AGG 0.467017 7.2:+63522875 None:intergenic
GCATTACAAACCCAAGCAAA+TGG 0.470644 7.2:+63523037 None:intergenic
TTGAGTCGGAACGACTGGAT+TGG 0.479126 7.2:+63523484 None:intergenic
TTTCTTATGAACCTTCTCAA+TGG 0.484564 7.2:-63523184 MS.gene67914:CDS
GGATTGGCGACACCGGGTCA+CGG 0.487951 7.2:+63523500 None:intergenic
AACAATGAGGTTACTGCAAG+TGG 0.492435 7.2:+63523315 None:intergenic
CATGACAATTTCTGCCTCAC+CGG 0.493102 7.2:-63522484 MS.gene67914:CDS
TAGGAACTTGGTAACAATAT+GGG 0.496786 7.2:+63522898 None:intergenic
ATTGGCTTGGGAAGTGGAAG+TGG 0.504604 7.2:-63522827 MS.gene67914:CDS
AAAGTTTCTATTCACAAGGC+TGG 0.506645 7.2:-63523014 MS.gene67914:intron
AATTAAGAAAGGTAGGAACT+TGG 0.514951 7.2:+63522886 None:intergenic
TGTTCACTTATAGGTTATGA+AGG 0.515268 7.2:-63522567 MS.gene67914:CDS
GATTGGCGACACCGGGTCAC+GGG 0.516687 7.2:+63523501 None:intergenic
AACGACTGGATTGGCGACAC+CGG 0.519606 7.2:+63523493 None:intergenic
CGAGTTAAATTAAGAAAGGT+AGG 0.529706 7.2:+63522879 None:intergenic
GAAGTTATCTCTGTGTCTAA+GGG 0.532567 7.2:-63522430 MS.gene67914:CDS
AAGTGAACATGTTCTAAGCT+CGG 0.540072 7.2:+63522581 None:intergenic
AAGAGAACAGGCGTGGGCGT+AGG 0.544438 7.2:+63523358 None:intergenic
ACGACTGGATTGGCGACACC+GGG 0.546040 7.2:+63523494 None:intergenic
GTTCTCAAATACTCTAAAGC+GGG 0.549602 7.2:+63523157 None:intergenic
ACAGGCGTGGGCGTAGGCGT+CGG 0.549990 7.2:+63523364 None:intergenic
AGTCATGCTCACCCGTGACC+CGG 0.558412 7.2:-63523512 None:intergenic
ATTCAATCTGTTGTCAAGCG+TGG 0.584273 7.2:-63523415 MS.gene67914:CDS
GCTGTCTATAAATTGTGTGT+TGG 0.588746 7.2:-63523278 MS.gene67914:CDS
TTGGATAGAATCTCATTCAA+CGG 0.590818 7.2:-63523223 MS.gene67914:CDS
AAGAGTTGCCACATTTGAGT+CGG 0.602897 7.2:+63523470 None:intergenic
AGTTGGTGATGGTGATTGGA+TGG 0.607749 7.2:-63522634 MS.gene67914:CDS
TATGAAAATGAAGTTGGTGA+TGG 0.614060 7.2:-63522645 MS.gene67914:intron
TAAGTTAAAGAGAACAGGCG+TGG 0.615007 7.2:+63523351 None:intergenic
AAGTTAAAGAGAACAGGCGT+GGG 0.618831 7.2:+63523352 None:intergenic
TGTTCTCAAATACTCTAAAG+CGG 0.620283 7.2:+63523156 None:intergenic
ATGCAAAGTTTCTATTCACA+AGG 0.621436 7.2:-63523018 MS.gene67914:CDS
CTGCAAGTGGAAACACATTG+AGG 0.624475 7.2:+63523328 None:intergenic
AGGCAGAAATTGTCATGGTG+TGG 0.627498 7.2:+63522490 None:intergenic
AAGCGGGACAACCATTGAGA+AGG 0.630596 7.2:+63523173 None:intergenic
CAGTCGTTCCGACTCAAATG+TGG 0.631056 7.2:-63523478 MS.gene67914:CDS
CGGTGAGGCAGAAATTGTCA+TGG 0.635056 7.2:+63522485 None:intergenic
GTACTCTGCAAACTGAAACT+CGG 0.635426 7.2:+63522536 None:intergenic
TAGTTAACTTAAGAACAATG+AGG 0.638997 7.2:+63523302 None:intergenic
AAGTTATCTCTGTGTCTAAG+GGG 0.663220 7.2:-63522429 MS.gene67914:CDS
TATATTGATATCAACCGGTG+AGG 0.669894 7.2:+63522470 None:intergenic
TCAGAATCTTATCATTCACG+AGG 0.687307 7.2:-63522772 MS.gene67914:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTTAAATTAAAACAAAT+TGG - chr7.2:63522940-63522959 MS.gene67914:intron 10.0%
!! TATTTCAACTTACAAATGAT+TGG - chr7.2:63523061-63523080 MS.gene67914:CDS 20.0%
! TAGTTAACTTAAGAACAATG+AGG + chr7.2:63522607-63522626 None:intergenic 25.0%
! TGCTTTATATTGATATCAAC+CGG + chr7.2:63523444-63523463 None:intergenic 25.0%
!! TTAGAGTATTTGAGAACATA+TGG - chr7.2:63522755-63522774 MS.gene67914:CDS 25.0%
!!! AAAAGGCATTTTGAAACAAT+TGG + chr7.2:63523303-63523322 None:intergenic 25.0%
!!! AAATGAAGAGTTTTGAGTAA+GGG + chr7.2:63522665-63522684 None:intergenic 25.0%
AACATTATGTTAGAAAGCCA+TGG + chr7.2:63522926-63522945 None:intergenic 30.0%
AATTAAGAAAGGTAGGAACT+TGG + chr7.2:63523023-63523042 None:intergenic 30.0%
AGAGAAAGTAATCAAAACGA+AGG + chr7.2:63523206-63523225 None:intergenic 30.0%
ATGCAAAGTTTCTATTCACA+AGG - chr7.2:63522888-63522907 MS.gene67914:CDS 30.0%
CATGCGAGTTAAATTAAGAA+AGG + chr7.2:63523034-63523053 None:intergenic 30.0%
CGAGTTAAATTAAGAAAGGT+AGG + chr7.2:63523030-63523049 None:intergenic 30.0%
CTTACTCAAAACTCTTCATT+TGG - chr7.2:63522664-63522683 MS.gene67914:intron 30.0%
CTTAGAACATGTTCACTTAT+AGG - chr7.2:63523330-63523349 MS.gene67914:CDS 30.0%
TCTACGTATGAAAATGAAGT+TGG - chr7.2:63523255-63523274 MS.gene67914:CDS 30.0%
TGTTCACTTATAGGTTATGA+AGG - chr7.2:63523339-63523358 MS.gene67914:CDS 30.0%
TTGGATAGAATCTCATTCAA+CGG - chr7.2:63522683-63522702 MS.gene67914:intron 30.0%
TTTCTTATGAACCTTCTCAA+TGG - chr7.2:63522722-63522741 MS.gene67914:intron 30.0%
TTTGAACATTCCATTTGCTT+GGG - chr7.2:63522859-63522878 MS.gene67914:CDS 30.0%
! TAGGAACTTGGTAACAATAT+GGG + chr7.2:63523011-63523030 None:intergenic 30.0%
! TGTTCTCAAATACTCTAAAG+CGG + chr7.2:63522753-63522772 None:intergenic 30.0%
! TTTAAGGATGAAGCGTTTAA+TGG - chr7.2:63522794-63522813 MS.gene67914:CDS 30.0%
! TTTTGAACATTCCATTTGCT+TGG - chr7.2:63522858-63522877 MS.gene67914:CDS 30.0%
!! AACTTACAAATGATTGGCTT+GGG - chr7.2:63523067-63523086 MS.gene67914:CDS 30.0%
!! TATGAAAATGAAGTTGGTGA+TGG - chr7.2:63523261-63523280 MS.gene67914:CDS 30.0%
!!! AGTTTTGAGTAAGGGAAAAT+TGG + chr7.2:63522657-63522676 None:intergenic 30.0%
!!! CAAATGAAGAGTTTTGAGTA+AGG + chr7.2:63522666-63522685 None:intergenic 30.0%
AAAGTTTCTATTCACAAGGC+TGG - chr7.2:63522892-63522911 MS.gene67914:CDS 35.0%
AAGTTATCTCTGTGTCTAAG+GGG - chr7.2:63523477-63523496 MS.gene67914:CDS 35.0%
GAAGTTATCTCTGTGTCTAA+GGG - chr7.2:63523476-63523495 MS.gene67914:CDS 35.0%
GAGATAACTTCGTAAGCATT+TGG + chr7.2:63523467-63523486 None:intergenic 35.0%
GCTGTCTATAAATTGTGTGT+TGG - chr7.2:63522628-63522647 MS.gene67914:CDS 35.0%
TATATTGATATCAACCGGTG+AGG + chr7.2:63523439-63523458 None:intergenic 35.0%
TCAGAATCTTATCATTCACG+AGG - chr7.2:63523134-63523153 MS.gene67914:CDS 35.0%
TGAGGTAAGTTAAAGAGAAC+AGG + chr7.2:63522563-63522582 None:intergenic 35.0%
! AAGTGAACATGTTCTAAGCT+CGG + chr7.2:63523328-63523347 None:intergenic 35.0%
! ATGTTCTAAGCTCGGATAAA+AGG + chr7.2:63523320-63523339 None:intergenic 35.0%
! CAACTTACAAATGATTGGCT+TGG - chr7.2:63523066-63523085 MS.gene67914:CDS 35.0%
! GTAGGAACTTGGTAACAATA+TGG + chr7.2:63523012-63523031 None:intergenic 35.0%
! TTTAGTGCAGTCTCGTTTTA+AGG - chr7.2:63522778-63522797 MS.gene67914:CDS 35.0%
!! GTTCTCAAATACTCTAAAGC+GGG + chr7.2:63522752-63522771 None:intergenic 35.0%
!! TCTGAAGCTTAGAACAGTTT+TGG + chr7.2:63523119-63523138 None:intergenic 35.0%
!!! AGGCATTTTGAAACAATTGG+TGG + chr7.2:63523300-63523319 None:intergenic 35.0%
!!! GGCATTTTGAAACAATTGGT+GGG + chr7.2:63523299-63523318 None:intergenic 35.0%
AACAATGAGGTTACTGCAAG+TGG + chr7.2:63522594-63522613 None:intergenic 40.0%
AAGAGTTGCCACATTTGAGT+CGG + chr7.2:63522439-63522458 None:intergenic 40.0%
AAGTTAAAGAGAACAGGCGT+GGG + chr7.2:63522557-63522576 None:intergenic 40.0%
ATTCAATCTGTTGTCAAGCG+TGG - chr7.2:63522491-63522510 MS.gene67914:CDS 40.0%
CGAAGTTATCTCTGTGTCTA+AGG - chr7.2:63523475-63523494 MS.gene67914:CDS 40.0%
GCATTACAAACCCAAGCAAA+TGG + chr7.2:63522872-63522891 None:intergenic 40.0%
GTACTCTGCAAACTGAAACT+CGG + chr7.2:63523373-63523392 None:intergenic 40.0%
TAAGTTAAAGAGAACAGGCG+TGG + chr7.2:63522558-63522577 None:intergenic 40.0%
!! ATGAAGTTGGTGATGGTGAT+TGG - chr7.2:63523268-63523287 MS.gene67914:CDS 40.0%
AGGCAGAAATTGTCATGGTG+TGG + chr7.2:63523419-63523438 None:intergenic 45.0%
CAAGGCTGGTATGAATACCA+TGG - chr7.2:63522906-63522925 MS.gene67914:CDS 45.0%
CATGACAATTTCTGCCTCAC+CGG - chr7.2:63523422-63523441 MS.gene67914:CDS 45.0%
CTCAAATGTGGCAACTCTTC+TGG - chr7.2:63522440-63522459 MS.gene67914:CDS 45.0%
CTGCAAGTGGAAACACATTG+AGG + chr7.2:63522581-63522600 None:intergenic 45.0%
!! AGTTGGTGATGGTGATTGGA+TGG - chr7.2:63523272-63523291 MS.gene67914:CDS 45.0%
!! CAAATGATTGGCTTGGGAAG+TGG - chr7.2:63523073-63523092 MS.gene67914:CDS 45.0%
AAGCGGGACAACCATTGAGA+AGG + chr7.2:63522736-63522755 None:intergenic 50.0%
CACATTTGAGTCGGAACGAC+TGG + chr7.2:63522430-63522449 None:intergenic 50.0%
CAGTCGTTCCGACTCAAATG+TGG - chr7.2:63522428-63522447 MS.gene67914:CDS 50.0%
CGGTGAGGCAGAAATTGTCA+TGG + chr7.2:63523424-63523443 None:intergenic 50.0%
TTGAGTCGGAACGACTGGAT+TGG + chr7.2:63522425-63522444 None:intergenic 50.0%
!! ATTGGCTTGGGAAGTGGAAG+TGG - chr7.2:63523079-63523098 MS.gene67914:CDS 50.0%
!! AACGACTGGATTGGCGACAC+CGG + chr7.2:63522416-63522435 None:intergenic 55.0%
AAGAGAACAGGCGTGGGCGT+AGG + chr7.2:63522551-63522570 None:intergenic 60.0%
!! ACGACTGGATTGGCGACACC+GGG + chr7.2:63522415-63522434 None:intergenic 60.0%
GATTGGCGACACCGGGTCAC+GGG + chr7.2:63522408-63522427 None:intergenic 65.0%
! GGATTGGCGACACCGGGTCA+CGG + chr7.2:63522409-63522428 None:intergenic 65.0%
ACAGGCGTGGGCGTAGGCGT+CGG + chr7.2:63522545-63522564 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 63522398 63523530 63522398 ID=MS.gene67914
chr7.2 mRNA 63522398 63523530 63522398 ID=MS.gene67914.t1;Parent=MS.gene67914
chr7.2 exon 63523015 63523530 63523015 ID=MS.gene67914.t1.exon1;Parent=MS.gene67914.t1
chr7.2 CDS 63523015 63523530 63523015 ID=cds.MS.gene67914.t1;Parent=MS.gene67914.t1
chr7.2 exon 63522751 63522925 63522751 ID=MS.gene67914.t1.exon2;Parent=MS.gene67914.t1
chr7.2 CDS 63522751 63522925 63522751 ID=cds.MS.gene67914.t1;Parent=MS.gene67914.t1
chr7.2 exon 63522398 63522654 63522398 ID=MS.gene67914.t1.exon3;Parent=MS.gene67914.t1
chr7.2 CDS 63522398 63522654 63522398 ID=cds.MS.gene67914.t1;Parent=MS.gene67914.t1
Gene Sequence

>MS.gene67914

ATGCTCACCCGTGACCCGGTGTCGCCAATCCAGTCGTTCCGACTCAAATGTGGCAACTCTTCTGGCTTCAACAAACACGATGTCAATTTATTTATTCAATCTGTTGTCAAGCGTGGAATTCAGAATCTCAAGCTTGACATGTCGCCGACGCCTACGCCCACGCCTGTTCTCTTTAACTTACCTCAATGTGTTTCCACTTGCAGTAACCTCATTGTTCTTAAGTTAACTAAGCTGTCTATAAATTGTGTGTTGGATGCCAATTTTCCCTTACTCAAAACTCTTCATTTGGATAGAATCTCATTCAACGGACGTCGCACTACTTACTTTCTTATGAACCTTCTCAATGGTTGTCCCGCTTTAGAGTATTTGAGAACATATGGTTTAGTGCAGTCTCGTTTTAAGGATGAAGCGTTTAATGGTTTACTCAAATTAGTCGAAGCAAGCATTTCTAACTCAACAATTTTGAACATTCCATTTGCTTGGGTTTGTAATGCAAAGTTTCTATTCACAAGGCTGGTATGAATACCATGGCTTTCTAACATAATGTTAAATTAAAACAAATTGGATTGATTGATTTCTAATGTTTGTTTTTGCAACTCATGCAGAAGCTCCCATATTGTTACCAAGTTCCTACCTTTCTTAATTTAACTCGCATGAAGATTGTATTTCAACTTACAAATGATTGGCTTGGGAAGTGGAAGTGGTTGATAGAAGTGCTCCAAAACTGTTCTAAGCTTCAGAATCTTATCATTCACGAGGTCTTATTTGTCGATGCTAAATGTTGATCATTTATTTAATTTAGCTTCCTTCGTTTTGATTACTTTCTCTAAGATTTTTTTTTTTGTTGTTGACACGATTCTACGTATGAAAATGAAGTTGGTGATGGTGATTGGATGGACCCACCAATTGTTTCAAAATGCCTTTTATCCGAGCTTAGAACATGTTCACTTATAGGTTATGAAGGTATGAAGTCCGAGTTTCAGTTTGCAGAGTACATTTTGAAGAATGCAAAAGTACTCCACACCATGACAATTTCTGCCTCACCGGTTGATATCAATATAAAGCACCAAATGCTTACGAAGTTATCTCTGTGTCTAAGGGGCTCTGCTACATGTAAACTCTCATTTGATTGA
Protein sequence

>MS.gene67914.t1

MLTRDPVSPIQSFRLKCGNSSGFNKHDVNLFIQSVVKRGIQNLKLDMSPTPTPTPVLFNLPQCVSTCSNLIVLKLTKLSINCVLDANFPLLKTLHLDRISFNGRRTTYFLMNLLNGCPALEYLRTYGLVQSRFKDEAFNGLLKLVEASISNSTILNIPFAWVCNAKFLFTRLKLPYCYQVPTFLNLTRMKIVFQLTNDWLGKWKWLIEVLQNCSKLQNLIIHEVLFVDAKFGDGDWMDPPIVSKCLLSELRTCSLIGYEGMKSEFQFAEYILKNAKVLHTMTISASPVDINIKHQMLTKLSLCLRGSATCKLSFD