AlfalfaGEDB | MS.gene60518

M. sativa cultivar XinJiangDaYe / MS.gene60518

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60518.t1	RHN81315.1	69.4	324	95	3	1	324	1	320	2.90E-112	415.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60518.t1	Q3EAE5	32.5	246	148	8	19	257	2	236	3.2e-19	97.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60518.t1	A0A396JZA3	69.4	324	95	3	1	324	1	320	2.1e-112	415.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene36810	MS.gene60518	PPI
MS.gene60518	MS.gene033695	PPI
MS.gene60518	MS.gene60520	PPI
MS.gene60518	MS.gene068017	PPI
MS.gene67914	MS.gene60518	PPI
MS.gene42267	MS.gene60518	PPI
MS.gene035057	MS.gene60518	PPI
MS.gene30044	MS.gene60518	PPI
MS.gene67917	MS.gene60518	PPI
MS.gene60520	MS.gene60518	PPI
MS.gene047137	MS.gene60518	PPI
MS.gene54959	MS.gene60518	PPI
MS.gene040253	MS.gene60518	PPI
MS.gene047136	MS.gene60518	PPI
MS.gene026015	MS.gene60518	PPI
MS.gene055754	MS.gene60518	PPI
MS.gene60522	MS.gene60518	PPI
MS.gene60518	MS.gene36943	PPI
MS.gene36752	MS.gene60518	PPI
MS.gene30261	MS.gene60518	PPI
MS.gene32300	MS.gene60518	PPI
MS.gene60518	MS.gene024262	PPI
MS.gene60518	MS.gene60522	PPI
MS.gene60518	MS.gene80861	PPI
MS.gene30057	MS.gene60518	PPI
MS.gene01653	MS.gene60518	PPI
MS.gene36764	MS.gene60518	PPI
MS.gene36942	MS.gene60518	PPI
MS.gene09993	MS.gene60518	PPI
MS.gene60518	MS.gene028491	PPI
MS.gene054896	MS.gene60518	PPI
MS.gene60518	MS.gene024564	PPI
MS.gene60518	MS.gene050535	PPI
MS.gene045772	MS.gene60518	PPI
MS.gene36763	MS.gene60518	PPI
MS.gene36804	MS.gene60518	PPI
MS.gene60518	MS.gene90228	PPI
MS.gene60518	MS.gene050470	PPI
MS.gene072000	MS.gene60518	PPI
MS.gene032379	MS.gene60518	PPI
MS.gene78164	MS.gene60518	PPI
MS.gene68084	MS.gene60518	PPI
MS.gene51793	MS.gene60518	PPI
MS.gene90228	MS.gene60518	PPI
MS.gene54960	MS.gene60518	PPI
MS.gene033694	MS.gene60518	PPI
MS.gene36809	MS.gene60518	PPI
MS.gene68081	MS.gene60518	PPI
MS.gene36807	MS.gene60518	PPI
MS.gene23706	MS.gene60518	PPI
MS.gene072003	MS.gene60518	PPI
MS.gene36743	MS.gene60518	PPI
MS.gene007794	MS.gene60518	PPI
MS.gene60518	MS.gene30261	PPI
MS.gene065373	MS.gene60518	PPI
MS.gene60518	MS.gene51795	PPI
MS.gene072244	MS.gene60518	PPI
MS.gene053586	MS.gene60518	PPI
MS.gene002112	MS.gene60518	PPI
MS.gene97791	MS.gene60518	PPI
MS.gene09990	MS.gene60518	PPI
MS.gene071257	MS.gene60518	PPI
MS.gene60518	MS.gene072231	PPI
MS.gene32305	MS.gene60518	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60518.t1	MTR_1g090883	70.645	310	87	3	1	310	1	306	2.45e-145	415
MS.gene60518.t1	MTR_4g056020	59.667	300	117	3	11	310	1	296	8.50e-111	330
MS.gene60518.t1	MTR_4g056040	56.061	330	111	4	11	310	1	326	1.68e-109	329
MS.gene60518.t1	MTR_4g055990	54.464	336	114	3	11	310	1	333	8.78e-105	316
MS.gene60518.t1	MTR_4g055990	54.464	336	114	3	11	310	1	333	1.32e-104	316
MS.gene60518.t1	MTR_1g038710	57.278	316	125	5	1	310	1	312	5.12e-104	313
MS.gene60518.t1	MTR_4g056070	53.687	339	115	3	11	310	1	336	2.39e-103	310
MS.gene60518.t1	MTR_4g055580	51.261	357	124	5	10	330	91	433	1.98e-101	310
MS.gene60518.t1	MTR_4g056030	57.333	300	124	3	11	310	1	296	5.65e-101	305
MS.gene60518.t1	MTR_4g093690	57.597	283	104	10	1	278	1	272	3.06e-84	256
MS.gene60518.t1	MTR_1g090900	70.000	180	50	3	11	188	1	178	3.61e-82	248
MS.gene60518.t1	MTR_7g110920	46.305	203	69	4	110	310	1	165	1.17e-41	148
MS.gene60518.t1	MTR_4g056010	67.021	94	29	1	84	177	6	97	2.52e-32	116
MS.gene60518.t1	MTR_5g084070	32.353	306	171	14	16	311	10	289	1.09e-18	87.0
MS.gene60518.t1	MTR_8g468810	28.739	341	213	11	1	324	1	328	2.52e-18	85.1
MS.gene60518.t1	MTR_8g467800	28.657	335	208	12	19	340	20	336	5.20e-18	84.0
MS.gene60518.t1	MTR_8g445780	28.402	338	205	11	2	329	3	313	3.54e-17	82.0
MS.gene60518.t1	MTR_5g080710	32.468	308	172	13	17	311	31	315	1.41e-16	80.9
MS.gene60518.t1	MTR_8g014260	28.485	330	194	12	1	308	1	310	2.75e-16	79.7
MS.gene60518.t1	MTR_8g468810	28.213	319	200	10	1	302	1	307	2.62e-15	76.3
MS.gene60518.t1	MTR_8g468810	28.213	319	200	10	1	302	1	307	2.79e-15	75.9
MS.gene60518.t1	MTR_8g468810	28.213	319	200	10	1	302	1	307	3.57e-15	76.6
MS.gene60518.t1	MTR_8g468810	28.213	319	200	10	1	302	1	307	3.74e-15	76.3
MS.gene60518.t1	MTR_7g007080	30.846	201	115	6	17	206	2	189	1.62e-14	74.3
MS.gene60518.t1	MTR_1g041245	28.383	303	179	10	19	305	11	291	2.86e-14	73.6
MS.gene60518.t1	MTR_2g005990	30.189	212	117	8	19	211	6	205	4.98e-14	72.8
MS.gene60518.t1	MTR_7g032380	25.680	331	200	8	19	312	11	332	7.31e-14	72.0
MS.gene60518.t1	MTR_1g085120	28.137	263	159	7	15	263	175	421	1.49e-13	71.6
MS.gene60518.t1	MTR_4g039440	33.831	201	106	11	19	211	34	215	1.55e-13	71.6
MS.gene60518.t1	MTR_8g467800	28.896	308	191	11	19	313	20	312	1.66e-13	71.6
MS.gene60518.t1	MTR_1g085120	28.137	263	159	7	15	263	163	409	1.94e-13	71.6
MS.gene60518.t1	MTR_6g011460	29.741	232	132	7	15	236	42	252	3.23e-13	70.5
MS.gene60518.t1	MTR_1g085120	27.184	309	189	10	15	304	88	379	3.35e-13	70.5
MS.gene60518.t1	MTR_1g066830	32.308	195	109	7	19	205	8	187	5.68e-13	69.7
MS.gene60518.t1	MTR_1g108820	27.160	324	199	12	19	324	8	312	5.99e-13	69.3
MS.gene60518.t1	MTR_7g034115	31.818	220	123	9	19	228	11	213	1.50e-12	68.2
MS.gene60518.t1	MTR_7g055943	29.630	216	127	8	13	221	34	231	1.54e-12	68.6
MS.gene60518.t1	MTR_7g056447	31.100	209	122	7	14	215	4	197	3.37e-12	66.6
MS.gene60518.t1	MTR_3g107100	29.353	201	128	5	15	211	7	197	3.42e-12	67.4
MS.gene60518.t1	MTR_8g062270	27.597	308	192	11	19	308	16	310	5.12e-12	67.0
MS.gene60518.t1	MTR_6g022360	30.374	214	105	8	13	210	37	222	5.21e-12	66.6
MS.gene60518.t1	MTR_4g024780	30.890	191	120	6	6	191	132	315	6.42e-12	66.6
MS.gene60518.t1	MTR_3g108560	31.841	201	112	8	16	211	17	197	8.40e-12	65.5
MS.gene60518.t1	MTR_0492s0020	31.500	200	110	9	19	212	86	264	8.91e-12	66.2
MS.gene60518.t1	MTR_0543s0010	31.500	200	110	9	19	212	86	264	9.59e-12	66.2
MS.gene60518.t1	MTR_8g085430	28.571	224	128	6	15	222	7	214	1.03e-11	65.5
MS.gene60518.t1	MTR_4g080590	27.070	314	189	10	16	310	20	312	1.19e-11	65.5
MS.gene60518.t1	MTR_1g108820	29.851	201	122	7	19	215	8	193	1.25e-11	65.5
MS.gene60518.t1	MTR_4g080590	27.070	314	189	10	16	310	20	312	1.27e-11	65.9
MS.gene60518.t1	MTR_3g108560	31.841	201	112	8	16	211	17	197	1.43e-11	65.5
MS.gene60518.t1	MTR_2g007450	30.263	228	131	7	6	212	2	222	1.90e-11	65.1
MS.gene60518.t1	MTR_3g463820	56.604	53	23	0	9	61	3	55	2.37e-11	63.9
MS.gene60518.t1	MTR_7g110910	62.500	48	18	0	1	48	148	195	2.72e-11	62.4
MS.gene60518.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	3.10e-11	64.3
MS.gene60518.t1	MTR_6g022500	27.586	232	128	7	15	229	97	305	3.61e-11	64.3
MS.gene60518.t1	MTR_8g062080	31.455	213	122	9	4	204	7	207	4.85e-11	63.9
MS.gene60518.t1	MTR_7g115270	32.512	203	117	8	16	205	4	199	5.65e-11	63.5
MS.gene60518.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	6.40e-11	63.5
MS.gene60518.t1	MTR_2g008320	28.912	294	167	12	14	293	47	312	6.77e-11	63.5
MS.gene60518.t1	MTR_5g058000	29.108	213	130	4	19	221	8	209	7.06e-11	63.2
MS.gene60518.t1	MTR_2g007500	28.899	218	126	7	19	229	14	209	7.59e-11	62.8
MS.gene60518.t1	MTR_1g107385	33.649	211	117	7	19	212	32	236	9.80e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60518.t1	AT1G55660	33.597	253	136	11	19	257	53	287	3.41e-21	93.6
MS.gene60518.t1	AT1G55660	33.597	253	136	11	19	257	53	287	8.30e-21	93.6
MS.gene60518.t1	AT4G00320	29.091	330	194	11	13	311	7	327	9.79e-21	93.2
MS.gene60518.t1	AT4G00315	32.129	249	145	9	19	257	2	236	1.17e-20	92.8
MS.gene60518.t1	AT3G59230	29.042	334	183	10	18	311	11	330	1.57e-20	92.8
MS.gene60518.t1	AT4G14103	28.254	315	193	10	18	311	7	309	7.87e-20	89.7
MS.gene60518.t1	AT4G14103	28.254	315	193	10	18	311	7	309	7.87e-20	89.7
MS.gene60518.t1	AT3G59200	28.743	334	177	14	18	311	6	318	9.55e-20	89.4
MS.gene60518.t1	AT5G41830	28.485	330	196	10	13	311	7	327	1.06e-19	90.5
MS.gene60518.t1	AT5G41840	27.089	347	202	9	7	311	2	339	1.46e-19	90.1
MS.gene60518.t1	AT1G51370	31.004	229	141	5	1	227	1	214	1.62e-19	88.6
MS.gene60518.t1	AT4G14103	28.254	315	193	10	18	311	7	309	1.63e-19	89.4
MS.gene60518.t1	AT3G59200	28.743	334	177	14	18	311	6	318	2.83e-19	89.0
MS.gene60518.t1	AT1G51370	31.004	229	141	5	1	227	1	214	5.39e-19	87.8
MS.gene60518.t1	AT2G29910	29.464	336	190	13	18	322	4	323	5.82e-19	86.7
MS.gene60518.t1	AT2G29910	29.464	336	190	13	18	322	4	323	5.82e-19	86.7
MS.gene60518.t1	AT1G51370	31.004	229	141	5	1	227	1	214	5.93e-19	87.4
MS.gene60518.t1	AT3G59210	28.440	327	182	10	18	311	6	313	1.38e-18	87.0
MS.gene60518.t1	AT3G59210	28.440	327	182	10	18	311	6	313	1.38e-18	87.0
MS.gene60518.t1	AT3G59210	28.440	327	182	10	18	311	6	313	1.38e-18	87.0
MS.gene60518.t1	AT3G59210	28.440	327	182	10	18	311	6	313	1.38e-18	87.0
MS.gene60518.t1	AT3G59210	28.440	327	182	10	18	311	6	313	1.38e-18	87.0
MS.gene60518.t1	AT4G10400	29.545	308	181	12	19	315	2	284	2.27e-18	85.9
MS.gene60518.t1	AT4G10400	29.545	308	181	12	19	315	2	284	2.27e-18	85.9
MS.gene60518.t1	AT4G10400	29.545	308	181	12	19	315	2	284	2.27e-18	85.9
MS.gene60518.t1	AT4G26340	29.352	293	179	11	19	304	2	273	2.40e-18	85.9
MS.gene60518.t1	AT4G14096	27.742	310	194	9	18	311	7	302	3.79e-18	85.5
MS.gene60518.t1	AT4G14096	27.742	310	194	9	18	311	7	302	3.79e-18	85.5
MS.gene60518.t1	AT5G44490	29.882	338	198	15	1	316	1	321	8.37e-18	84.3
MS.gene60518.t1	AT3G59190	27.077	325	196	9	17	311	10	323	9.66e-18	84.0
MS.gene60518.t1	AT5G44490	29.882	338	198	15	1	316	1	321	1.42e-17	84.0
MS.gene60518.t1	AT2G42720	29.664	327	183	14	19	322	2	304	1.53e-17	83.6
MS.gene60518.t1	AT3G59190	27.160	324	195	9	18	311	11	323	1.68e-17	84.0
MS.gene60518.t1	AT2G42730	32.751	229	120	10	18	227	4	217	2.14e-17	83.2
MS.gene60518.t1	AT3G50710	30.078	256	145	8	19	258	2	239	2.57e-17	82.8
MS.gene60518.t1	AT4G09920	30.000	300	181	11	19	309	2	281	3.96e-17	80.9
MS.gene60518.t1	AT4G09920	30.000	300	181	11	19	309	2	281	3.96e-17	80.9
MS.gene60518.t1	AT4G09920	30.000	300	181	11	19	309	2	281	3.96e-17	80.9
MS.gene60518.t1	AT3G42770	30.293	307	179	12	24	311	4	294	5.91e-17	82.0
MS.gene60518.t1	AT4G09920	29.739	306	185	12	19	315	2	286	6.08e-17	80.9
MS.gene60518.t1	AT4G09920	29.739	306	185	12	19	315	2	286	6.08e-17	80.9
MS.gene60518.t1	AT5G56370	31.452	248	141	8	19	257	2	229	6.29e-17	80.9
MS.gene60518.t1	AT5G62970	30.982	326	162	14	19	307	2	301	6.55e-17	81.6
MS.gene60518.t1	AT5G56370	31.452	248	141	8	19	257	2	229	1.21e-16	80.9
MS.gene60518.t1	AT5G56370	31.452	248	141	8	19	257	2	229	1.21e-16	80.9
MS.gene60518.t1	AT2G29910	28.329	353	197	14	17	336	3	332	1.22e-16	80.5
MS.gene60518.t1	AT2G29910	28.329	353	197	14	17	336	3	332	1.22e-16	80.5
MS.gene60518.t1	AT2G29910	28.329	353	197	14	17	336	3	332	1.22e-16	80.5
MS.gene60518.t1	AT2G29910	28.329	353	197	14	17	336	3	332	1.22e-16	80.5
MS.gene60518.t1	AT2G29910	28.409	352	196	14	18	336	28	356	1.41e-16	80.5
MS.gene60518.t1	AT5G60610	30.435	299	166	12	19	305	2	270	2.00e-16	80.1
MS.gene60518.t1	AT5G60610	30.435	299	166	12	19	305	2	270	2.00e-16	80.1
MS.gene60518.t1	AT5G44950	29.483	329	167	18	18	311	3	301	6.54e-16	78.6
MS.gene60518.t1	AT5G53635	29.450	309	177	11	21	308	2	290	7.68e-16	78.6
MS.gene60518.t1	AT2G26860	32.680	306	157	17	19	304	2	278	1.28e-15	77.8
MS.gene60518.t1	AT2G26860	32.680	306	157	17	19	304	2	278	1.28e-15	77.8
MS.gene60518.t1	AT5G53840	27.508	309	199	8	15	316	14	304	1.58e-15	77.8
MS.gene60518.t1	AT3G58900	28.144	334	195	11	19	320	2	322	2.37e-15	76.3
MS.gene60518.t1	AT3G58900	28.144	334	195	11	19	320	2	322	2.37e-15	76.3
MS.gene60518.t1	AT3G58960	27.129	317	202	11	19	315	2	309	2.81e-15	77.0
MS.gene60518.t1	AT5G56420	31.429	245	152	8	18	257	5	238	2.82e-15	76.6
MS.gene60518.t1	AT5G56420	31.429	245	152	8	18	257	5	238	2.82e-15	76.6
MS.gene60518.t1	AT5G56420	31.429	245	152	8	18	257	5	238	2.82e-15	76.6
MS.gene60518.t1	AT3G58860	28.754	313	190	10	15	311	3	298	2.87e-15	77.0
MS.gene60518.t1	AT3G49150	26.061	330	203	12	9	314	6	318	3.11e-15	76.6
MS.gene60518.t1	AT4G22280	31.741	293	176	11	19	305	2	276	7.68e-15	74.7
MS.gene60518.t1	AT5G56380	29.236	301	172	9	19	293	2	287	9.20e-15	75.5
MS.gene60518.t1	AT5G56380	29.236	301	172	9	19	293	2	287	9.20e-15	75.5
MS.gene60518.t1	AT5G22730	25.449	334	209	9	19	331	28	342	1.15e-14	75.1
MS.gene60518.t1	AT5G22730	25.449	334	209	9	19	331	28	342	1.15e-14	75.1
MS.gene60518.t1	AT5G22730	25.449	334	209	9	19	331	28	342	1.21e-14	74.7
MS.gene60518.t1	AT4G22280	31.741	293	176	11	19	305	2	276	1.97e-14	74.3
MS.gene60518.t1	AT1G13780	27.003	337	208	13	19	329	10	334	2.60e-14	73.2
MS.gene60518.t1	AT1G58310	27.434	339	193	11	15	311	4	331	2.64e-14	73.9
MS.gene60518.t1	AT4G13960	27.554	323	185	10	19	311	2	305	3.55e-14	73.6
MS.gene60518.t1	AT4G13960	27.554	323	185	10	19	311	2	305	3.55e-14	73.6
MS.gene60518.t1	AT5G38590	28.571	294	180	12	19	304	2	273	4.06e-14	72.4
MS.gene60518.t1	AT5G22670	34.821	224	119	9	18	232	10	215	6.06e-14	72.8
MS.gene60518.t1	AT5G38590	28.105	306	189	13	19	315	2	285	1.01e-13	72.0
MS.gene60518.t1	AT3G58880	27.500	320	189	9	19	311	3	306	1.02e-13	72.0
MS.gene60518.t1	AT2G26030	32.046	259	133	14	19	257	4	239	1.18e-13	72.0
MS.gene60518.t1	AT2G26030	32.046	259	133	14	19	257	4	239	1.19e-13	72.0
MS.gene60518.t1	AT2G26030	32.046	259	133	14	19	257	4	239	1.19e-13	72.0
MS.gene60518.t1	AT5G53640	31.731	208	117	10	6	205	5	195	1.41e-13	69.7
MS.gene60518.t1	AT1G06630	27.508	309	195	12	18	312	11	304	1.97e-13	70.5
MS.gene60518.t1	AT3G60040	29.052	327	186	15	18	315	231	540	1.98e-13	71.6
MS.gene60518.t1	AT3G60040	29.052	327	186	15	18	315	229	538	2.21e-13	71.6
MS.gene60518.t1	AT3G60040	29.052	327	186	15	18	315	231	540	3.53e-13	70.9
MS.gene60518.t1	AT3G58900	28.000	325	189	11	19	311	2	313	3.56e-13	69.7
MS.gene60518.t1	AT3G60040	29.052	327	186	15	18	315	232	541	3.63e-13	70.9
MS.gene60518.t1	AT1G66290	26.562	320	194	10	14	313	24	322	4.55e-13	70.1
MS.gene60518.t1	AT3G60040	29.052	327	186	15	18	315	12	321	4.56e-13	70.5
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	5.14e-13	69.7
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	5.14e-13	69.7
MS.gene60518.t1	AT4G15060	27.832	309	182	15	16	304	23	310	5.50e-13	69.7
MS.gene60518.t1	AT3G59250	27.213	305	173	8	18	311	6	272	6.40e-13	69.7
MS.gene60518.t1	AT5G22700	28.173	323	184	14	15	311	2	302	7.37e-13	69.7
MS.gene60518.t1	AT5G22700	28.173	323	184	14	15	311	2	302	7.37e-13	69.7
MS.gene60518.t1	AT5G22700	28.173	323	184	14	15	311	2	302	7.37e-13	69.7
MS.gene60518.t1	AT5G22700	28.173	323	184	14	15	311	2	302	7.37e-13	69.7
MS.gene60518.t1	AT5G22700	28.173	323	184	14	15	311	39	339	7.84e-13	69.7
MS.gene60518.t1	AT3G58900	28.000	325	189	11	19	311	2	313	8.36e-13	69.3
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	8.48e-13	69.3
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	8.48e-13	69.3
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	8.48e-13	69.3
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	8.48e-13	69.3
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	20	314	8.57e-13	69.3
MS.gene60518.t1	AT3G44810	27.451	306	198	8	21	311	9	305	8.60e-13	69.3
MS.gene60518.t1	AT1G13780	27.129	317	194	12	19	309	10	315	1.11e-12	68.9
MS.gene60518.t1	AT3G44060	28.662	314	179	17	24	315	4	294	1.23e-12	68.9
MS.gene60518.t1	AT1G78760	25.402	311	201	7	17	311	14	309	1.31e-12	68.9
MS.gene60518.t1	AT4G15060	27.778	306	180	15	19	304	172	456	1.39e-12	68.9
MS.gene60518.t1	AT1G16930	25.074	339	217	9	19	337	15	336	1.67e-12	68.6
MS.gene60518.t1	AT1G16930	25.074	339	217	9	19	337	15	336	1.67e-12	68.6
MS.gene60518.t1	AT1G16930	25.074	339	217	9	19	337	15	336	1.67e-12	68.6
MS.gene60518.t1	AT1G06630	27.097	310	197	12	18	313	11	305	2.32e-12	68.2
MS.gene60518.t1	AT5G18780	25.826	333	202	13	15	326	7	315	2.46e-12	67.8
MS.gene60518.t1	AT5G18780	25.826	333	202	13	15	326	7	315	2.46e-12	67.8
MS.gene60518.t1	AT2G04230	30.120	249	150	10	19	255	13	249	2.88e-12	67.8
MS.gene60518.t1	AT5G38396	27.576	330	183	10	19	311	2	312	3.19e-12	67.8
MS.gene60518.t1	AT5G56820	27.987	318	163	12	19	310	15	292	3.99e-12	67.4
MS.gene60518.t1	AT5G18780	25.826	333	202	13	15	326	7	315	5.32e-12	67.0
MS.gene60518.t1	AT5G18780	25.826	333	202	13	15	326	7	315	5.32e-12	67.0
MS.gene60518.t1	AT1G66300	25.150	334	203	10	2	313	18	326	5.39e-12	67.0
MS.gene60518.t1	AT1G69630	26.269	335	208	11	3	315	2	319	5.89e-12	67.0
MS.gene60518.t1	AT2G29930	27.974	311	188	12	18	311	11	302	8.53e-12	66.2
MS.gene60518.t1	AT2G29930	27.974	311	188	12	18	311	11	302	8.53e-12	66.2
MS.gene60518.t1	AT4G13985	24.332	337	217	10	1	313	1	323	1.12e-11	65.9
MS.gene60518.t1	AT5G22660	27.160	324	200	12	8	311	2	309	1.27e-11	65.1
MS.gene60518.t1	AT5G41630	29.048	210	123	4	15	208	8	207	2.23e-11	65.1
MS.gene60518.t1	AT1G52650	26.769	325	186	12	19	311	2	306	2.44e-11	65.1
MS.gene60518.t1	AT3G59240	25.559	313	202	10	18	311	7	307	3.14e-11	64.7
MS.gene60518.t1	AT3G03040	25.000	324	199	8	19	311	2	312	3.42e-11	64.7
MS.gene60518.t1	AT3G26922	27.063	303	196	12	17	313	12	295	3.61e-11	63.5
MS.gene60518.t1	AT3G26922	27.063	303	196	12	17	313	12	295	3.61e-11	63.5
MS.gene60518.t1	AT3G59150	26.786	336	199	15	3	311	2	317	4.24e-11	64.3
MS.gene60518.t1	AT3G62440	27.410	332	196	11	19	318	2	320	6.11e-11	63.9
MS.gene60518.t1	AT1G32020	31.429	140	84	5	19	152	4	137	6.50e-11	60.8
MS.gene60518.t1	AT3G49030	24.922	321	203	12	17	325	19	313	6.55e-11	63.5
MS.gene60518.t1	AT3G62430	29.114	316	188	16	19	315	2	300	6.61e-11	63.5
MS.gene60518.t1	AT5G22700	31.140	228	129	9	15	232	39	248	8.22e-11	63.2
MS.gene60518.t1	AT5G22720	26.687	326	199	10	1	300	1	312	8.24e-11	63.5
MS.gene60518.t1	AT5G22660	26.852	324	201	12	8	311	2	309	8.89e-11	63.2

Find 57 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATATAGATTGGATTGTTTC+AGG	0.217974	1.2:-68390888	None:intergenic
AATCATATGATGTACACTTA+TGG	0.253540	1.2:+68390976	MS.gene60518:CDS
CACTGCTTTGGATTTCTTGT+TGG	0.255966	1.2:-68390676	None:intergenic
CGTCCGAGAGTTTGCTTAAT+CGG	0.301365	1.2:-68390722	None:intergenic
ATCATATGATGTACACTTAT+GGG	0.341061	1.2:+68390977	MS.gene60518:CDS
TAGAATTTAACACAATATAT+TGG	0.345355	1.2:-68391193	None:intergenic
TTAATATTGCTGATCTTTCA+AGG	0.361331	1.2:+68391423	MS.gene60518:CDS
CAATTTGTATTCACTCTTGA+AGG	0.377131	1.2:+68391526	MS.gene60518:CDS
AGCATTAGACCTCAAGGTTC+AGG	0.387883	1.2:+68391007	MS.gene60518:CDS
TAATCGGTCACGCTGTTCAT+TGG	0.402367	1.2:-68390706	None:intergenic
AAGTGCATGTGTCGTAGTTA+TGG	0.415477	1.2:-68391649	None:intergenic
ATTGGTGCATGCCACTGCTT+TGG	0.415515	1.2:-68390688	None:intergenic
GAATACAAATTGTTAACATC+TGG	0.418896	1.2:-68391515	None:intergenic
GAGAGTAGCTTGATCAAGAT+TGG	0.422523	1.2:-68391477	None:intergenic
GGATTGTTTCAGGCGAGCTA+GGG	0.423410	1.2:-68390878	None:intergenic
TGGATTGTTTCAGGCGAGCT+AGG	0.434320	1.2:-68390879	None:intergenic
TGTAATTCAAAGTCAAGGTC+GGG	0.435354	1.2:-68390840	None:intergenic
GTGAAAAGAGACAATATTGA+TGG	0.440058	1.2:-68391309	None:intergenic
GGAGAGATGCATATATAGAT+TGG	0.441384	1.2:-68390899	None:intergenic
CCTTGACTTTGAATTACAAA+AGG	0.453164	1.2:+68390845	MS.gene60518:CDS
AGCCTAAGCGGCAATAAAGT+TGG	0.465701	1.2:-68391065	None:intergenic
AAAGTCAAGGTCGGGGATCA+TGG	0.467138	1.2:-68390832	None:intergenic
GTCCAACTTTATTGCCGCTT+AGG	0.483228	1.2:+68391063	MS.gene60518:CDS
CAGCAATATTAAGAACTTCA+AGG	0.487952	1.2:-68391412	None:intergenic
ATAAGTGTACATCATATGAT+TGG	0.497079	1.2:-68390974	None:intergenic
TTCAAAAGCATTAGACCTCA+AGG	0.503454	1.2:+68391001	MS.gene60518:CDS
GTCGGGGATCATGGTGCAGA+TGG	0.509229	1.2:-68390823	None:intergenic
GATGAAGAATCTTTAGTGAC+GGG	0.513941	1.2:-68391169	None:intergenic
CATGTGTTCTATCCACAAGA+TGG	0.520664	1.2:+68390796	MS.gene60518:CDS
AATTTGTATTCACTCTTGAA+GGG	0.522877	1.2:+68391527	MS.gene60518:CDS
ATCTCGTTGTCCACATCTTG+AGG	0.524833	1.2:+68391256	MS.gene60518:CDS
CTAAAGCTCTTTAGTGACAA+TGG	0.542283	1.2:+68390948	MS.gene60518:CDS
GATTGTTTCAGGCGAGCTAG+GGG	0.551052	1.2:-68390877	None:intergenic
TTGTAATTCAAAGTCAAGGT+CGG	0.553939	1.2:-68390841	None:intergenic
TTGTTTCAGGCGAGCTAGGG+GGG	0.555730	1.2:-68390875	None:intergenic
TCACAAGAAGAACTGAGTCT+TGG	0.568698	1.2:-68391137	None:intergenic
ATAAAGTTGGACGTTTGTCA+AGG	0.572353	1.2:-68391052	None:intergenic
GACGGAACATTAATTTGCAG+TGG	0.572866	1.2:-68391389	None:intergenic
AGCAATATTAAGAACTTCAA+GGG	0.574759	1.2:-68391411	None:intergenic
ATGTGTTCTATCCACAAGAT+GGG	0.579779	1.2:+68390797	MS.gene60518:CDS
AGATGAAGAATCTTTAGTGA+CGG	0.580197	1.2:-68391170	None:intergenic
AGGAACTTGACGTGGAATGT+TGG	0.588805	1.2:+68391027	MS.gene60518:CDS
GTAATTCAAAGTCAAGGTCG+GGG	0.602298	1.2:-68390839	None:intergenic
TAAAGTTGGACGTTTGTCAA+GGG	0.603334	1.2:-68391051	None:intergenic
CAAGGTTCAGGAACTTGACG+TGG	0.605052	1.2:+68391019	MS.gene60518:CDS
AAGAGAAATTCCTCAAGATG+TGG	0.606892	1.2:-68391266	None:intergenic
ATTGTTTCAGGCGAGCTAGG+GGG	0.607411	1.2:-68390876	None:intergenic
CTCGTGGTCTTAAAATTGCA+CGG	0.608869	1.2:+68391104	MS.gene60518:CDS
GAAACGTAAGAATCAAGAAG+AGG	0.611044	1.2:-68391365	None:intergenic
TTCCATGTCTAAGTCGCTCG+TGG	0.617485	1.2:+68391088	MS.gene60518:CDS
TGACCGATTAAGCAAACTCT+CGG	0.617679	1.2:+68390719	MS.gene60518:CDS
GACCACGAGCGACTTAGACA+TGG	0.625420	1.2:-68391090	None:intergenic
CGTCAAGTTCCTGAACCTTG+AGG	0.629391	1.2:-68391016	None:intergenic
GCAGATGGACTCCCATCTTG+TGG	0.639474	1.2:-68390808	None:intergenic
CAACAAGAAATCCAAAGCAG+TGG	0.641414	1.2:+68390677	MS.gene60518:CDS
ATATTAAGAACTTCAAGGGA+CGG	0.644409	1.2:-68391407	None:intergenic
TTAGACATGGAAAGCCTAAG+CGG	0.711604	1.2:-68391077	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGAATTTAACACAATATAT+TGG	-	chr1.2:68391196-68391215	None:intergenic	15.0%
!!!	CTTTAGTTTTCTTATGTTTT+CGG	-	chr1.2:68390934-68390953	None:intergenic	20.0%
!	AATCATATGATGTACACTTA+TGG	+	chr1.2:68390976-68390995	MS.gene60518:CDS	25.0%
!	AATTTGTATTCACTCTTGAA+GGG	+	chr1.2:68391527-68391546	MS.gene60518:CDS	25.0%
!	AGCAATATTAAGAACTTCAA+GGG	-	chr1.2:68391414-68391433	None:intergenic	25.0%
!	ATAAGTGTACATCATATGAT+TGG	-	chr1.2:68390977-68390996	None:intergenic	25.0%
!	ATCATATGATGTACACTTAT+GGG	+	chr1.2:68390977-68390996	MS.gene60518:CDS	25.0%
!	GAATACAAATTGTTAACATC+TGG	-	chr1.2:68391518-68391537	None:intergenic	25.0%
!	TATATAGATTGGATTGTTTC+AGG	-	chr1.2:68390891-68390910	None:intergenic	25.0%
!	TTAATATTGCTGATCTTTCA+AGG	+	chr1.2:68391423-68391442	MS.gene60518:CDS	25.0%
	AGATGAAGAATCTTTAGTGA+CGG	-	chr1.2:68391173-68391192	None:intergenic	30.0%
	ATATTAAGAACTTCAAGGGA+CGG	-	chr1.2:68391410-68391429	None:intergenic	30.0%
	CAATTTGTATTCACTCTTGA+AGG	+	chr1.2:68391526-68391545	MS.gene60518:CDS	30.0%
	CAGCAATATTAAGAACTTCA+AGG	-	chr1.2:68391415-68391434	None:intergenic	30.0%
	CCTTGACTTTGAATTACAAA+AGG	+	chr1.2:68390845-68390864	MS.gene60518:CDS	30.0%
	GTGAAAAGAGACAATATTGA+TGG	-	chr1.2:68391312-68391331	None:intergenic	30.0%
	TTGTAATTCAAAGTCAAGGT+CGG	-	chr1.2:68390844-68390863	None:intergenic	30.0%
!	CCTTTTGTAATTCAAAGTCA+AGG	-	chr1.2:68390848-68390867	None:intergenic	30.0%
!	TGTAAGCTTCTTTTGTTGAT+AGG	-	chr1.2:68390773-68390792	None:intergenic	30.0%
	AAGAGAAATTCCTCAAGATG+TGG	-	chr1.2:68391269-68391288	None:intergenic	35.0%
	ATAAAGTTGGACGTTTGTCA+AGG	-	chr1.2:68391055-68391074	None:intergenic	35.0%
	ATGTGTTCTATCCACAAGAT+GGG	+	chr1.2:68390797-68390816	MS.gene60518:CDS	35.0%
	CTAAAGCTCTTTAGTGACAA+TGG	+	chr1.2:68390948-68390967	MS.gene60518:CDS	35.0%
	GAAACGTAAGAATCAAGAAG+AGG	-	chr1.2:68391368-68391387	None:intergenic	35.0%
	GATGAAGAATCTTTAGTGAC+GGG	-	chr1.2:68391172-68391191	None:intergenic	35.0%
	GGAGAGATGCATATATAGAT+TGG	-	chr1.2:68390902-68390921	None:intergenic	35.0%
	TAAAGTTGGACGTTTGTCAA+GGG	-	chr1.2:68391054-68391073	None:intergenic	35.0%
	TGTAATTCAAAGTCAAGGTC+GGG	-	chr1.2:68390843-68390862	None:intergenic	35.0%
!!	TTCAAAAGCATTAGACCTCA+AGG	+	chr1.2:68391001-68391020	MS.gene60518:CDS	35.0%
	AAGTGCATGTGTCGTAGTTA+TGG	-	chr1.2:68391652-68391671	None:intergenic	40.0%
	CAACAAGAAATCCAAAGCAG+TGG	+	chr1.2:68390677-68390696	MS.gene60518:CDS	40.0%
	CATGTGTTCTATCCACAAGA+TGG	+	chr1.2:68390796-68390815	MS.gene60518:CDS	40.0%
	GAGAGTAGCTTGATCAAGAT+TGG	-	chr1.2:68391480-68391499	None:intergenic	40.0%
	GTAATTCAAAGTCAAGGTCG+GGG	-	chr1.2:68390842-68390861	None:intergenic	40.0%
	TCACAAGAAGAACTGAGTCT+TGG	-	chr1.2:68391140-68391159	None:intergenic	40.0%
	TGACCGATTAAGCAAACTCT+CGG	+	chr1.2:68390719-68390738	MS.gene60518:CDS	40.0%
	TTAGACATGGAAAGCCTAAG+CGG	-	chr1.2:68391080-68391099	None:intergenic	40.0%
!	ACTACGACACATGCACTTTT+TGG	+	chr1.2:68391654-68391673	MS.gene60518:CDS	40.0%
!	CACTGCTTTGGATTTCTTGT+TGG	-	chr1.2:68390679-68390698	None:intergenic	40.0%
!	CTCGTGGTCTTAAAATTGCA+CGG	+	chr1.2:68391104-68391123	MS.gene60518:CDS	40.0%
!!	GACGGAACATTAATTTGCAG+TGG	-	chr1.2:68391392-68391411	None:intergenic	40.0%
	AGCATTAGACCTCAAGGTTC+AGG	+	chr1.2:68391007-68391026	MS.gene60518:CDS	45.0%
	AGCCTAAGCGGCAATAAAGT+TGG	-	chr1.2:68391068-68391087	None:intergenic	45.0%
	AGGAACTTGACGTGGAATGT+TGG	+	chr1.2:68391027-68391046	MS.gene60518:CDS	45.0%
	ATCTCGTTGTCCACATCTTG+AGG	+	chr1.2:68391256-68391275	MS.gene60518:CDS	45.0%
	TAATCGGTCACGCTGTTCAT+TGG	-	chr1.2:68390709-68390728	None:intergenic	45.0%
!	CGTCCGAGAGTTTGCTTAAT+CGG	-	chr1.2:68390725-68390744	None:intergenic	45.0%
!	GTCCAACTTTATTGCCGCTT+AGG	+	chr1.2:68391063-68391082	MS.gene60518:CDS	45.0%
!!	TTATGTTTTCGGTGCGTCTC+AGG	-	chr1.2:68390923-68390942	None:intergenic	45.0%
	AAAGTCAAGGTCGGGGATCA+TGG	-	chr1.2:68390835-68390854	None:intergenic	50.0%
	ATTGGTGCATGCCACTGCTT+TGG	-	chr1.2:68390691-68390710	None:intergenic	50.0%
	ATTGTTTCAGGCGAGCTAGG+GGG	-	chr1.2:68390879-68390898	None:intergenic	50.0%
	CAAGGTTCAGGAACTTGACG+TGG	+	chr1.2:68391019-68391038	MS.gene60518:CDS	50.0%
	CGTCAAGTTCCTGAACCTTG+AGG	-	chr1.2:68391019-68391038	None:intergenic	50.0%
	GATTGTTTCAGGCGAGCTAG+GGG	-	chr1.2:68390880-68390899	None:intergenic	50.0%
	GGATTGTTTCAGGCGAGCTA+GGG	-	chr1.2:68390881-68390900	None:intergenic	50.0%
	TGGATTGTTTCAGGCGAGCT+AGG	-	chr1.2:68390882-68390901	None:intergenic	50.0%
	TTCCATGTCTAAGTCGCTCG+TGG	+	chr1.2:68391088-68391107	MS.gene60518:CDS	50.0%
	GACCACGAGCGACTTAGACA+TGG	-	chr1.2:68391093-68391112	None:intergenic	55.0%
	TTGTTTCAGGCGAGCTAGGG+GGG	-	chr1.2:68390878-68390897	None:intergenic	55.0%
!	GCAGATGGACTCCCATCTTG+TGG	-	chr1.2:68390811-68390830	None:intergenic	55.0%
	GTCGGGGATCATGGTGCAGA+TGG	-	chr1.2:68390826-68390845	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	68390666	68391691	68390666	ID=MS.gene60518
chr1.2	mRNA	68390666	68391691	68390666	ID=MS.gene60518.t1;Parent=MS.gene60518
chr1.2	exon	68390666	68391691	68390666	ID=MS.gene60518.t1.exon1;Parent=MS.gene60518.t1
chr1.2	CDS	68390666	68391691	68390666	ID=cds.MS.gene60518.t1;Parent=MS.gene60518.t1

Gene Sequence

>MS.gene60518

ATGGAGGAAGCCAACAAGAAATCCAAAGCAGTGGCATGCACCAATGAACAGCGTGACCGATTAAGCAAACTCTCGGACGAATTGATTCTTCGTATTCTGTCTTTCCTATCAACAAAAGAAGCTTACAAAACATGTGTTCTATCCACAAGATGGGAGTCCATCTGCACCATGATCCCCGACCTTGACTTTGAATTACAAAAGGTTTCAGACCCCCCTAGCTCGCCTGAAACAATCCAATCTATATATGCATCTCTCCTGAGACGCACCGAAAACATAAGAAAACTAAAGCTCTTTAGTGACAATGGCTGCCAATCATATGATGTACACTTATGGGTTTCAAAAGCATTAGACCTCAAGGTTCAGGAACTTGACGTGGAATGTTGGTCCCTTGACAAACGTCCAACTTTATTGCCGCTTAGGCTTTCCATGTCTAAGTCGCTCGTGGTCTTAAAATTGCACGGTGAAGCTCAGCCAAGACTCAGTTCTTCTTGTGATGTATCTTTCCCGTCACTAAAGATTCTTCATCTCCAATATATTGTGTTAAATTCTATCATAGATAATCATAGTGAGTATGATCTCTCTGAATTTCTATCTCGTTGTCCACATCTTGAGGAATTTCTCTTACATGACGTCTTCAAACAAGCCATCAATATTGTCTCTTTTCACTCATTAAAGAGATTAATATTTCTTTTAGAGATGCCTCTTCTTGATTCTTACGTTTCTCCACTGCAAATTAATGTTCCGTCCCTTGAAGTTCTTAATATTGCTGATCTTTCAAGGACTCACAAAAAATACGAGCTTATAAACTTGTCCAATCTTGATCAAGCTACTCTCTGCTTTAATGAGCATCCAGATGTTAACAATTTGTATTCACTCTTGAAGGGAGTTTCTAATGTCAAATCATTGACTATCAATTATGAAACTATTCATGTAAGTTTCATTTTTTTATTATTTTTATTTTATTTTATTTTTTATGACAAGTTCCATAACTACGACACATGCACTTTTTGGTTATGCAGCATCTAA

Protein sequence

>MS.gene60518.t1

MEEANKKSKAVACTNEQRDRLSKLSDELILRILSFLSTKEAYKTCVLSTRWESICTMIPDLDFELQKVSDPPSSPETIQSIYASLLRRTENIRKLKLFSDNGCQSYDVHLWVSKALDLKVQELDVECWSLDKRPTLLPLRLSMSKSLVVLKLHGEAQPRLSSSCDVSFPSLKILHLQYIVLNSIIDNHSEYDLSEFLSRCPHLEEFLLHDVFKQAINIVSFHSLKRLIFLLEMPLLDSYVSPLQINVPSLEVLNIADLSRTHKKYELINLSNLDQATLCFNEHPDVNNLYSLLKGVSNVKSLTINYETIHVSFIFLLFLFYFIFYDKFHNYDTCTFWLCSI