AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25787


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25787.t1 MTR_3g080580 97.353 529 14 0 1 529 1 529 0.0 1073
MS.gene25787.t1 MTR_7g029275 57.443 524 196 6 3 519 7 510 0.0 587
MS.gene25787.t1 MTR_7g096340 46.091 486 234 6 40 518 39 503 3.44e-152 445
MS.gene25787.t1 MTR_7g096320 44.600 500 249 5 26 518 26 504 5.90e-148 434
MS.gene25787.t1 MTR_1g070345 45.437 515 247 10 10 517 17 504 2.43e-145 427
MS.gene25787.t1 MTR_1g070365 44.190 525 260 10 1 517 5 504 2.99e-142 420
MS.gene25787.t1 MTR_4g054920 47.257 474 213 9 59 518 67 517 3.19e-138 410
MS.gene25787.t1 MTR_2g086040 47.835 462 211 7 59 517 64 498 2.25e-136 404
MS.gene25787.t1 MTR_7g088330 43.762 521 262 11 5 517 11 508 5.44e-136 404
MS.gene25787.t1 MTR_1g060550 44.280 472 238 6 51 517 61 512 5.43e-132 394
MS.gene25787.t1 MTR_4g075110 39.139 511 278 10 20 517 59 549 3.65e-114 349
MS.gene25787.t1 MTR_1g037560 39.877 489 272 8 41 517 65 543 6.37e-112 343
MS.gene25787.t1 MTR_1g037550 41.741 448 233 8 86 517 112 547 1.13e-111 343
MS.gene25787.t1 MTR_5g019140 37.228 505 273 10 40 517 43 530 1.25e-104 324
MS.gene25787.t1 MTR_4g119660 37.030 505 274 9 40 517 28 515 1.29e-104 323
MS.gene25787.t1 MTR_8g098435 36.072 499 293 10 31 517 21 505 2.61e-100 312
MS.gene25787.t1 MTR_5g070010 35.458 502 276 10 40 517 31 508 1.64e-98 307
MS.gene25787.t1 MTR_1g102220 35.950 484 282 10 43 517 42 506 5.09e-98 306
MS.gene25787.t1 MTR_8g035680 35.270 482 288 10 43 517 48 512 3.85e-96 301
MS.gene25787.t1 MTR_8g035860 36.905 504 276 13 7 497 14 488 2.82e-95 299
MS.gene25787.t1 MTR_8g030590 35.141 498 300 9 40 524 30 517 1.03e-94 298
MS.gene25787.t1 MTR_8g035760 34.792 480 292 9 43 517 48 511 3.28e-94 296
MS.gene25787.t1 MTR_8g035820 36.998 473 261 12 38 497 40 488 1.62e-93 294
MS.gene25787.t1 MTR_6g004630 34.227 485 292 9 43 517 36 503 1.38e-92 292
MS.gene25787.t1 MTR_8g035810 34.524 504 293 12 6 497 11 489 2.74e-92 291
MS.gene25787.t1 MTR_3g463060 35.306 490 272 9 40 512 36 497 4.10e-91 288
MS.gene25787.t1 MTR_6g004670 34.021 485 294 8 43 517 37 505 5.22e-89 283
MS.gene25787.t1 MTR_6g004600 33.643 538 311 13 1 517 3 515 6.16e-89 283
MS.gene25787.t1 MTR_7g033570 33.939 495 301 11 30 517 19 494 6.53e-88 280
MS.gene25787.t1 MTR_6g004610 33.610 482 289 11 49 518 2 464 2.70e-87 277
MS.gene25787.t1 MTR_1g036200 33.583 533 305 14 2 518 1 500 3.36e-87 278
MS.gene25787.t1 MTR_8g088470 34.343 495 300 12 30 517 15 491 1.09e-86 276
MS.gene25787.t1 MTR_1g035790 33.133 498 286 9 41 517 31 502 4.41e-86 275
MS.gene25787.t1 MTR_6g004590 34.325 504 291 12 35 517 31 515 2.07e-85 273
MS.gene25787.t1 MTR_8g035780 34.884 473 276 11 30 489 28 481 2.22e-84 271
MS.gene25787.t1 MTR_1g036270 31.743 545 307 12 2 517 3 511 3.70e-84 270
MS.gene25787.t1 MTR_1g035670 33.797 503 281 12 39 518 30 503 9.00e-84 269
MS.gene25787.t1 MTR_7g033580 33.333 498 300 12 30 517 19 494 9.28e-84 268
MS.gene25787.t1 MTR_1g050362 31.387 548 302 14 2 517 1 506 1.09e-82 266
MS.gene25787.t1 MTR_8g035810 33.405 467 274 12 6 460 11 452 4.33e-79 255
MS.gene25787.t1 MTR_1g035750 33.806 494 293 15 41 518 31 506 6.64e-79 256
MS.gene25787.t1 MTR_1g035760 32.591 494 276 13 39 518 30 480 5.15e-78 253
MS.gene25787.t1 MTR_1g036130 32.806 506 284 14 40 518 31 507 7.00e-78 254
MS.gene25787.t1 MTR_1g035830 34.791 503 279 17 39 517 30 507 6.22e-76 248
MS.gene25787.t1 MTR_1g035580 29.799 547 300 12 2 517 3 496 5.47e-74 243
MS.gene25787.t1 MTR_1g036010 31.774 513 281 16 39 517 30 507 7.11e-74 243
MS.gene25787.t1 MTR_1g035800 32.335 501 294 11 42 517 32 512 9.14e-71 235
MS.gene25787.t1 MTR_1g035940 31.755 507 283 16 42 517 33 507 4.37e-69 231
MS.gene25787.t1 MTR_7g406990 38.028 355 208 6 38 383 45 396 3.33e-68 226
MS.gene25787.t1 MTR_3g080610 46.102 295 73 4 181 474 90 299 1.17e-67 221
MS.gene25787.t1 MTR_8g035680 32.275 378 235 8 147 517 2 365 2.27e-67 222
MS.gene25787.t1 MTR_1g069715 30.734 436 260 9 92 507 1 414 1.93e-61 214
MS.gene25787.t1 MTR_1g070370 45.200 250 124 2 178 426 5 242 1.06e-59 197
MS.gene25787.t1 MTR_1g035860 30.000 480 267 14 5 458 13 449 1.45e-58 202
MS.gene25787.t1 MTR_1g102210 33.613 357 189 9 170 517 44 361 5.94e-56 192
MS.gene25787.t1 MTR_8g035810 31.783 387 237 11 6 380 11 382 5.00e-54 187
MS.gene25787.t1 MTR_4g012320 36.123 227 127 4 292 516 12 222 4.17e-45 158
MS.gene25787.t1 MTR_2g061740 40.816 196 102 2 71 255 3 195 6.98e-40 144
MS.gene25787.t1 MTR_2g061750 40.306 196 103 2 71 255 3 195 7.23e-39 141
MS.gene25787.t1 MTR_7g079440 25.330 454 296 16 80 519 226 650 1.94e-32 132
MS.gene25787.t1 MTR_2g062670 40.217 184 103 3 176 357 66 244 6.69e-31 125
MS.gene25787.t1 MTR_2g062670 34.392 189 82 4 176 364 282 428 9.35e-23 101
MS.gene25787.t1 MTR_1g062190 23.947 451 305 15 81 519 117 541 1.29e-29 122
MS.gene25787.t1 MTR_8g042020 25.597 461 264 18 84 516 113 522 2.81e-29 121
MS.gene25787.t1 MTR_8g042060 24.726 457 281 18 81 516 109 523 1.34e-28 119
MS.gene25787.t1 MTR_8g042000 25.966 466 264 17 81 516 109 523 1.39e-28 119
MS.gene25787.t1 MTR_2g072270 25.566 442 263 13 81 499 109 507 2.56e-28 119
MS.gene25787.t1 MTR_2g055430 25.866 433 248 16 80 486 102 487 3.53e-27 115
MS.gene25787.t1 MTR_2g072340 26.923 416 233 15 109 496 125 497 6.31e-27 114
MS.gene25787.t1 MTR_2g072400 24.406 463 288 16 58 499 79 500 1.45e-26 113
MS.gene25787.t1 MTR_7g079440 25.984 381 248 13 81 449 227 585 1.70e-26 114
MS.gene25787.t1 MTR_2g055470 25.866 433 248 16 80 486 102 487 3.33e-26 112
MS.gene25787.t1 MTR_8g042060 24.558 452 252 17 81 516 109 487 7.15e-26 111
MS.gene25787.t1 MTR_2g023680 25.463 432 270 11 84 499 107 502 8.61e-26 111
MS.gene25787.t1 MTR_8g046580 44.800 125 57 2 383 507 193 305 1.35e-25 107
MS.gene25787.t1 MTR_8g046580 31.156 199 117 4 40 238 12 190 6.22e-22 96.7
MS.gene25787.t1 MTR_1g101040 27.427 412 248 17 93 489 112 487 1.71e-25 110
MS.gene25787.t1 MTR_1g101050 27.665 394 238 16 108 489 125 483 4.41e-25 108
MS.gene25787.t1 MTR_6g017325 26.720 378 231 11 118 486 136 476 5.15e-25 108
MS.gene25787.t1 MTR_7g006900 25.266 376 239 9 118 486 101 441 5.81e-24 105
MS.gene25787.t1 MTR_6g072490 26.904 394 241 16 108 489 127 485 6.38e-24 105
MS.gene25787.t1 MTR_4g031820 25.466 483 289 19 58 516 92 527 1.88e-23 104
MS.gene25787.t1 MTR_1g069200 25.339 442 287 16 69 499 87 496 2.42e-23 103
MS.gene25787.t1 MTR_5g009110 21.895 475 319 15 80 517 111 570 3.29e-23 103
MS.gene25787.t1 MTR_4g104610 23.848 499 314 18 11 486 10 465 4.47e-23 102
MS.gene25787.t1 MTR_5g095290 25.192 520 293 25 5 487 5 465 6.16e-23 102
MS.gene25787.t1 MTR_7g075610 23.735 514 314 20 1 487 6 468 1.02e-22 101
MS.gene25787.t1 MTR_5g019010 24.760 521 313 19 7 494 7 481 1.65e-22 101
MS.gene25787.t1 MTR_8g042040 25.339 442 273 19 84 516 113 506 1.87e-22 100
MS.gene25787.t1 MTR_0025s0110 25.255 392 252 14 108 489 138 498 7.19e-22 99.4
MS.gene25787.t1 MTR_2g072310 25.989 354 201 12 169 499 20 335 8.50e-22 97.4
MS.gene25787.t1 MTR_0147s0030 24.554 448 258 13 64 488 112 502 1.13e-21 99.0
MS.gene25787.t1 MTR_5g091760 25.549 501 316 19 5 497 7 458 1.26e-21 98.2
MS.gene25787.t1 MTR_6g084770 25.054 467 292 12 40 486 41 469 1.35e-21 98.6
MS.gene25787.t1 MTR_2g072260 25.114 438 245 17 80 486 95 480 1.38e-21 98.6
MS.gene25787.t1 MTR_4g031820 25.053 471 284 18 58 516 92 505 1.78e-21 98.2
MS.gene25787.t1 MTR_5g070710 23.633 512 310 19 2 486 8 465 2.08e-21 97.8
MS.gene25787.t1 MTR_8g469360 25.290 431 249 12 81 486 11 393 2.10e-21 97.1
MS.gene25787.t1 MTR_3g093530 25.328 458 271 16 53 486 83 493 2.43e-21 97.8
MS.gene25787.t1 MTR_2g010330 25.822 426 272 12 80 487 76 475 2.47e-21 97.8
MS.gene25787.t1 MTR_2g010250 25.773 485 301 20 30 487 21 473 6.09e-21 96.3
MS.gene25787.t1 MTR_7g055793 26.214 412 262 15 86 488 117 495 8.58e-21 95.9
MS.gene25787.t1 MTR_5g095230 24.201 438 277 18 80 499 98 498 9.15e-21 95.9
MS.gene25787.t1 MTR_7g055793 26.214 412 262 15 86 488 62 440 1.17e-20 95.1
MS.gene25787.t1 MTR_4g104550 23.110 463 306 15 39 487 31 457 1.50e-20 95.1
MS.gene25787.t1 MTR_2g061200 24.810 395 251 12 115 489 133 501 1.92e-20 95.1
MS.gene25787.t1 MTR_2g072250 25.850 441 260 18 80 496 98 495 3.72e-20 94.0
MS.gene25787.t1 MTR_2g072380 24.934 377 208 14 169 516 20 350 3.89e-20 92.4
MS.gene25787.t1 MTR_2g010320 31.602 231 136 6 265 487 255 471 6.52e-20 93.2
MS.gene25787.t1 MTR_5g072980 24.094 469 284 17 50 487 40 467 1.01e-19 92.8
MS.gene25787.t1 MTR_5g072930 24.094 469 284 17 50 487 40 467 1.01e-19 92.8
MS.gene25787.t1 MTR_2g061760 40.404 99 59 0 157 255 3 101 1.07e-19 85.1
MS.gene25787.t1 MTR_2g010380 32.759 232 132 7 265 487 261 477 1.17e-19 92.4
MS.gene25787.t1 MTR_5g095260 23.944 497 283 22 27 487 29 466 1.17e-19 92.4
MS.gene25787.t1 MTR_2g072380 25.132 378 206 15 169 516 160 490 1.43e-19 92.0
MS.gene25787.t1 MTR_6g035115 23.404 423 274 13 79 487 76 462 1.87e-19 91.7
MS.gene25787.t1 MTR_2g010290 24.738 477 300 18 30 487 64 500 2.07e-19 91.7
MS.gene25787.t1 MTR_8g098565 30.667 225 138 5 267 486 261 472 5.11e-19 90.5
MS.gene25787.t1 MTR_5g034900 24.124 485 305 13 40 491 35 489 6.26e-19 90.1
MS.gene25787.t1 MTR_5g094520 25.600 500 298 19 11 487 48 496 6.31e-19 90.5
MS.gene25787.t1 MTR_4g089025 22.664 503 335 18 1 487 19 483 7.81e-19 90.1
MS.gene25787.t1 MTR_3g057980 23.232 495 333 18 1 487 6 461 7.99e-19 89.7
MS.gene25787.t1 MTR_4g089030 22.574 505 332 18 3 487 17 482 1.82e-18 89.0
MS.gene25787.t1 MTR_2g010280 31.414 191 116 4 298 487 295 471 1.95e-18 88.6
MS.gene25787.t1 MTR_5g009110 21.739 437 289 14 119 517 1 422 2.06e-18 88.2
MS.gene25787.t1 MTR_4g113650 22.658 459 279 11 58 489 82 491 2.18e-18 88.6
MS.gene25787.t1 MTR_5g073020 23.667 469 299 17 40 487 37 467 2.62e-18 88.2
MS.gene25787.t1 MTR_5g094540 25.344 509 305 18 1 487 10 465 3.22e-18 87.8
MS.gene25787.t1 MTR_2g061910 44.554 101 53 1 67 167 56 153 4.24e-18 82.0
MS.gene25787.t1 MTR_2g062680 32.317 164 64 3 274 437 24 140 5.35e-18 82.8
MS.gene25787.t1 MTR_8g008530 23.776 429 283 11 65 487 99 489 7.12e-18 87.0
MS.gene25787.t1 MTR_6g008500 23.519 540 317 24 7 494 15 510 9.11e-18 86.7
MS.gene25787.t1 MTR_6g008530 23.574 526 317 20 2 488 16 495 1.94e-17 85.9
MS.gene25787.t1 MTR_3g057910 22.532 466 304 13 40 487 42 468 1.99e-17 85.5
MS.gene25787.t1 MTR_4g088195 26.812 276 174 9 228 489 212 473 2.27e-17 85.5
MS.gene25787.t1 MTR_5g094520 25.118 422 269 13 79 487 4 391 2.67e-17 84.7
MS.gene25787.t1 MTR_4g071710 23.409 487 285 17 40 487 41 478 2.92e-17 85.1
MS.gene25787.t1 MTR_7g012860 23.391 466 302 17 40 487 37 465 3.13e-17 85.1
MS.gene25787.t1 MTR_0287s0060 23.391 466 302 17 40 487 37 465 3.13e-17 85.1
MS.gene25787.t1 MTR_2g065360 22.629 464 310 12 40 489 11 439 3.79e-17 84.3
MS.gene25787.t1 MTR_7g028020 22.394 518 316 19 1 487 5 467 4.31e-17 84.7
MS.gene25787.t1 MTR_3g076560 21.722 511 314 15 9 487 24 480 5.45e-17 84.3
MS.gene25787.t1 MTR_5g018990 23.113 424 279 11 79 486 76 468 5.68e-17 84.0
MS.gene25787.t1 MTR_5g094660 24.057 424 270 13 79 487 78 464 6.73e-17 84.0
MS.gene25787.t1 MTR_4g133750 24.594 431 261 17 79 486 78 467 8.02e-17 83.6
MS.gene25787.t1 MTR_4g104660 23.062 503 321 14 8 487 19 478 9.31e-17 83.6
MS.gene25787.t1 MTR_0022s0290 23.529 476 299 16 39 487 44 481 1.12e-16 83.2
MS.gene25787.t1 MTR_8g063280 27.966 236 144 6 262 487 246 465 1.16e-16 83.2
MS.gene25787.t1 MTR_7g075580 23.871 465 288 19 47 487 45 467 1.39e-16 82.8
MS.gene25787.t1 MTR_4g088160 25.362 276 178 9 228 489 212 473 1.41e-16 82.8
MS.gene25787.t1 MTR_5g094570 22.664 428 272 12 79 487 78 465 1.66e-16 82.8
MS.gene25787.t1 MTR_5g470730 23.568 454 286 17 5 434 10 426 2.36e-16 81.6
MS.gene25787.t1 MTR_7g079440 25.843 267 175 8 81 331 227 486 2.41e-16 82.0
MS.gene25787.t1 MTR_4g048580 23.679 511 314 16 2 487 6 465 2.63e-16 82.0
MS.gene25787.t1 MTR_8g036185 24.940 417 263 16 97 487 91 483 2.69e-16 82.0
MS.gene25787.t1 MTR_3g057860 22.691 498 341 12 3 489 5 469 4.12e-16 81.6
MS.gene25787.t1 MTR_8g466180 23.772 509 314 20 8 487 3 466 5.89e-16 80.9
MS.gene25787.t1 MTR_5g009110 22.159 352 236 11 80 411 111 444 6.29e-16 80.5
MS.gene25787.t1 MTR_0171s0010 24.409 508 327 21 1 487 4 475 8.60e-16 80.5
MS.gene25787.t1 MTR_5g094840 24.359 468 288 20 40 486 48 470 9.77e-16 80.5
MS.gene25787.t1 MTR_7g027960 22.394 518 316 20 1 487 5 467 1.31e-15 80.1
MS.gene25787.t1 MTR_4g088420 28.877 187 115 4 302 488 30 198 1.41e-15 76.6
MS.gene25787.t1 MTR_5g007450 21.961 510 337 15 2 494 10 475 2.56e-15 79.0
MS.gene25787.t1 MTR_4g018800 23.958 480 299 17 42 488 45 491 2.74e-15 79.0
MS.gene25787.t1 MTR_5g073250 23.366 505 329 18 1 487 1 465 3.05e-15 78.6
MS.gene25787.t1 MTR_5g026520 27.413 259 152 8 248 487 235 476 3.38e-15 78.6
MS.gene25787.t1 MTR_5g070850 21.643 499 326 16 10 486 13 468 3.77e-15 78.6
MS.gene25787.t1 MTR_7g087520 22.774 483 300 17 40 490 41 482 3.90e-15 78.6
MS.gene25787.t1 MTR_8g035790 42.308 78 35 1 412 489 1 68 5.27e-15 71.2
MS.gene25787.t1 MTR_3g057970 22.764 492 329 20 6 487 6 456 5.32e-15 77.8
MS.gene25787.t1 MTR_5g095220 22.521 484 288 19 27 487 16 435 5.87e-15 77.8
MS.gene25787.t1 MTR_4g104540 22.520 373 243 10 128 486 55 395 6.08e-15 77.4
MS.gene25787.t1 MTR_6g008430 21.627 504 339 19 7 488 15 484 6.62e-15 77.8
MS.gene25787.t1 MTR_3g057800 22.892 498 336 14 2 487 3 464 7.04e-15 77.4
MS.gene25787.t1 MTR_5g073320 21.861 462 310 15 40 487 42 466 7.88e-15 77.4
MS.gene25787.t1 MTR_5g094550 24.586 423 270 15 79 487 78 465 9.05e-15 77.4
MS.gene25787.t1 MTR_1g102390 38.144 97 57 1 43 139 42 135 9.75e-15 71.6
MS.gene25787.t1 MTR_8g042000 25.633 316 185 11 81 376 109 394 1.34e-14 76.3
MS.gene25787.t1 MTR_2g073440 25.197 254 159 7 254 497 227 459 1.66e-14 76.3
MS.gene25787.t1 MTR_6g008640 22.379 496 309 17 30 488 33 489 1.85e-14 76.3
MS.gene25787.t1 MTR_4g088170 24.555 281 176 9 228 489 212 475 2.71e-14 75.9
MS.gene25787.t1 MTR_2g073480 25.197 254 159 7 254 497 160 392 2.80e-14 75.1
MS.gene25787.t1 MTR_3g025260 23.448 435 272 15 79 486 70 470 2.94e-14 75.9
MS.gene25787.t1 MTR_6g008600 22.841 521 325 22 2 488 16 493 3.88e-14 75.5
MS.gene25787.t1 MTR_5g070700 22.332 506 322 16 5 486 10 468 4.51e-14 75.1
MS.gene25787.t1 MTR_2g073420 23.932 234 152 5 260 487 260 473 4.70e-14 75.1
MS.gene25787.t1 MTR_2g010300 29.474 190 105 5 298 486 295 456 5.31e-14 74.7
MS.gene25787.t1 MTR_0171s0030 26.260 377 236 16 128 489 38 387 9.28e-14 73.6
MS.gene25787.t1 MTR_3g076530 22.156 501 330 16 4 487 11 468 1.30e-13 73.6
MS.gene25787.t1 MTR_1g035140 22.562 523 310 21 2 489 5 467 1.42e-13 73.6
MS.gene25787.t1 MTR_7g098550 22.274 431 275 15 80 498 98 480 1.61e-13 73.2
MS.gene25787.t1 MTR_6g022450 22.145 429 304 9 79 497 78 486 2.17e-13 72.8
MS.gene25787.t1 MTR_6g034965 23.139 497 330 19 4 487 7 464 2.43e-13 72.8
MS.gene25787.t1 MTR_5g073230 22.056 467 288 13 40 487 45 454 2.96e-13 72.4
MS.gene25787.t1 MTR_4g062510 27.604 192 122 5 296 487 307 481 3.42e-13 72.4
MS.gene25787.t1 MTR_8g100135 25.194 258 164 9 251 501 228 463 3.60e-13 72.0
MS.gene25787.t1 MTR_1g022040 21.219 443 285 13 75 499 91 487 3.67e-13 72.0
MS.gene25787.t1 MTR_3g467220 22.391 527 347 24 6 499 18 515 4.02e-13 72.0
MS.gene25787.t1 MTR_4g026200 21.277 423 290 13 79 487 68 461 4.54e-13 72.0
MS.gene25787.t1 MTR_7g075600 24.104 502 325 15 1 487 7 467 5.40e-13 71.6
MS.gene25787.t1 MTR_4g077210 22.926 458 286 17 52 487 55 467 7.66e-13 71.2
MS.gene25787.t1 MTR_3g058060 22.397 509 311 19 13 487 11 469 1.04e-12 70.9
MS.gene25787.t1 MTR_3g058250 21.457 508 336 16 1 487 1 466 1.18e-12 70.5
MS.gene25787.t1 MTR_2g010530 22.749 422 278 13 79 487 73 459 1.38e-12 70.5
MS.gene25787.t1 MTR_5g021390 20.213 470 312 14 40 486 48 477 1.67e-12 70.1
MS.gene25787.t1 MTR_6g008620 23.346 257 165 7 244 488 255 491 2.51e-12 69.7
MS.gene25787.t1 MTR_6g034940 25.121 207 129 6 296 499 284 467 2.59e-12 69.3
MS.gene25787.t1 MTR_8g089800 21.915 470 312 17 40 497 44 470 2.93e-12 69.3
MS.gene25787.t1 MTR_1g035190 22.844 429 275 15 79 487 59 451 3.85e-12 68.9
MS.gene25787.t1 MTR_6g042610 22.556 532 322 21 9 497 9 493 4.88e-12 68.6
MS.gene25787.t1 MTR_3g436390 22.176 478 292 17 40 487 40 467 5.26e-12 68.6
MS.gene25787.t1 MTR_8g012585 23.913 230 150 6 266 488 207 418 9.05e-12 67.8
MS.gene25787.t1 MTR_4g078110 24.870 193 121 5 296 486 271 441 1.04e-11 67.4
MS.gene25787.t1 MTR_3g058210 22.289 498 328 19 8 487 12 468 1.67e-11 67.0
MS.gene25787.t1 MTR_2g055430 25.704 284 177 11 80 346 102 368 1.95e-11 66.2
MS.gene25787.t1 MTR_5g092150 21.277 376 248 10 123 492 115 448 2.07e-11 66.6
MS.gene25787.t1 MTR_5g056720 25.792 221 125 7 302 516 227 414 2.28e-11 66.2
MS.gene25787.t1 MTR_4g062500 21.250 480 307 17 39 487 38 477 2.45e-11 66.6
MS.gene25787.t1 MTR_8g020950 23.173 479 292 15 40 489 42 473 3.01e-11 66.2
MS.gene25787.t1 MTR_8g104030 21.484 256 163 6 249 486 9 244 3.64e-11 64.7
MS.gene25787.t1 MTR_8g091680 22.573 443 276 12 47 487 39 416 3.97e-11 65.5
MS.gene25787.t1 MTR_8g077810 22.086 489 334 18 35 515 29 478 4.12e-11 65.9
MS.gene25787.t1 MTR_5g009110 22.045 313 207 10 119 411 1 296 4.33e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25787.t1 AT3G48520 58.301 518 196 5 1 517 1 499 0.0 600
MS.gene25787.t1 AT5G63450 58.513 511 197 4 10 519 8 504 0.0 588
MS.gene25787.t1 AT5G63450 58.513 511 197 4 10 519 66 562 0.0 588
MS.gene25787.t1 AT3G01900 54.918 488 195 5 33 517 25 490 0.0 548
MS.gene25787.t1 AT3G56630 43.505 485 246 8 42 517 33 498 2.43e-136 404
MS.gene25787.t1 AT1G34540 42.380 479 259 5 42 517 33 497 2.21e-134 399
MS.gene25787.t1 AT2G27690 42.706 473 243 8 51 517 44 494 1.08e-126 379
MS.gene25787.t1 AT5G08250 39.113 496 264 9 41 517 2 478 3.75e-112 342
MS.gene25787.t1 AT5G08250 39.113 496 264 9 41 517 64 540 1.29e-111 342
MS.gene25787.t1 AT5G23190 41.667 444 236 6 85 517 109 540 1.39e-110 340
MS.gene25787.t1 AT1G24540 37.172 495 277 7 40 517 43 520 5.79e-108 332
MS.gene25787.t1 AT2G45510 37.187 519 284 12 6 512 15 503 1.84e-105 325
MS.gene25787.t1 AT2G44890 37.670 515 291 12 9 512 8 503 1.44e-103 320
MS.gene25787.t1 AT1G63710 37.805 492 278 11 40 517 30 507 8.02e-103 319
MS.gene25787.t1 AT1G13140 37.728 493 278 11 40 517 46 524 1.13e-102 319
MS.gene25787.t1 AT3G26125 37.475 507 268 14 40 517 46 532 1.57e-102 319
MS.gene25787.t1 AT2G45970 37.959 490 283 10 40 517 30 510 2.64e-100 313
MS.gene25787.t1 AT1G69500 35.922 515 274 12 40 517 28 523 5.52e-99 309
MS.gene25787.t1 AT2G23180 34.156 527 303 10 9 517 12 512 4.45e-97 304
MS.gene25787.t1 AT2G44890 36.576 514 280 13 9 512 8 485 8.46e-97 302
MS.gene25787.t1 AT4G00360 34.818 494 294 11 40 517 30 511 1.92e-95 301
MS.gene25787.t1 AT1G13140 36.307 482 274 10 40 517 46 498 6.84e-94 295
MS.gene25787.t1 AT5G58860 35.091 493 288 7 40 517 33 508 1.53e-93 295
MS.gene25787.t1 AT1G13150 35.671 499 290 10 35 517 34 517 4.79e-93 294
MS.gene25787.t1 AT1G01600 33.534 498 305 8 40 521 30 517 1.18e-90 288
MS.gene25787.t1 AT4G39490 32.904 544 310 14 1 517 1 516 7.03e-90 285
MS.gene25787.t1 AT5G52320 33.800 500 292 10 32 516 26 501 5.48e-89 282
MS.gene25787.t1 AT4G39480 34.737 475 283 8 58 517 51 513 3.80e-88 281
MS.gene25787.t1 AT5G52320 33.603 494 289 10 32 510 26 495 2.22e-87 278
MS.gene25787.t1 AT2G21910 32.591 494 300 8 39 517 31 506 2.22e-87 278
MS.gene25787.t1 AT1G65340 32.735 501 297 9 32 516 26 502 1.10e-86 276
MS.gene25787.t1 AT1G57750 30.508 531 320 11 1 518 3 497 1.06e-79 258
MS.gene25787.t1 AT4G32170 31.301 492 304 10 40 517 32 503 4.58e-77 251
MS.gene25787.t1 AT4G39510 32.056 496 293 9 42 517 34 505 5.47e-77 251
MS.gene25787.t1 AT1G47620 31.120 527 328 9 10 520 11 518 6.11e-76 249
MS.gene25787.t1 AT4G39500 30.830 506 307 9 33 517 33 516 6.84e-76 249
MS.gene25787.t1 AT4G39500 31.106 479 290 8 57 517 10 466 1.28e-73 241
MS.gene25787.t1 AT1G57750 30.853 457 276 10 1 444 3 432 1.70e-66 222
MS.gene25787.t1 AT5G02900 30.277 469 267 14 42 491 25 452 1.87e-63 215
MS.gene25787.t1 AT3G53130 26.000 450 293 12 81 517 117 539 1.71e-34 137
MS.gene25787.t1 AT1G31800 24.229 454 301 15 80 519 147 571 1.23e-28 120
MS.gene25787.t1 AT3G14640 25.225 444 257 15 80 496 122 517 4.32e-27 115
MS.gene25787.t1 AT3G14640 25.225 444 257 15 80 496 100 495 4.51e-27 115
MS.gene25787.t1 AT3G48300 22.176 478 311 13 24 487 21 451 8.34e-27 114
MS.gene25787.t1 AT3G48300 22.176 478 311 13 24 487 23 453 8.49e-27 114
MS.gene25787.t1 AT5G52400 27.949 390 237 14 108 488 136 490 7.52e-26 111
MS.gene25787.t1 AT5G24900 26.450 431 252 16 81 486 106 496 1.26e-25 110
MS.gene25787.t1 AT3G14680 23.947 451 280 16 85 516 105 511 2.47e-25 109
MS.gene25787.t1 AT5G24900 26.794 418 241 16 94 486 2 379 7.51e-25 107
MS.gene25787.t1 AT3G48280 23.529 510 309 17 1 487 2 453 8.77e-25 107
MS.gene25787.t1 AT3G48270 23.028 469 296 12 39 489 34 455 1.03e-24 107
MS.gene25787.t1 AT3G48310 22.766 470 303 16 35 489 32 456 2.86e-23 103
MS.gene25787.t1 AT5G24910 24.835 455 256 16 81 498 110 515 3.90e-23 103
MS.gene25787.t1 AT3G14690 24.533 428 261 12 109 516 161 546 1.48e-22 101
MS.gene25787.t1 AT3G14690 24.476 429 260 13 109 516 126 511 2.44e-22 100
MS.gene25787.t1 AT3G14660 22.889 450 286 13 85 516 105 511 6.15e-22 99.8
MS.gene25787.t1 AT2G26710 23.556 450 275 13 58 486 83 484 1.70e-21 98.2
MS.gene25787.t1 AT3G14650 23.744 438 275 14 80 499 100 496 1.74e-21 98.2
MS.gene25787.t1 AT4G13310 24.101 473 295 15 40 489 33 464 2.38e-21 97.8
MS.gene25787.t1 AT3G48290 23.326 463 298 12 39 487 36 455 3.20e-21 97.1
MS.gene25787.t1 AT4G13290 23.567 471 304 15 34 489 28 457 6.33e-21 96.3
MS.gene25787.t1 AT3G14620 23.478 460 290 15 59 496 77 496 2.62e-20 94.7
MS.gene25787.t1 AT5G24950 23.729 472 297 17 40 489 33 463 2.95e-20 94.4
MS.gene25787.t1 AT2G30770 23.690 477 302 17 34 489 28 463 6.49e-20 93.2
MS.gene25787.t1 AT3G14630 23.736 455 284 14 81 516 97 507 6.76e-20 93.2
MS.gene25787.t1 AT4G15110 21.460 452 291 16 80 488 118 548 1.22e-19 92.8
MS.gene25787.t1 AT3G14630 23.725 451 281 14 85 516 156 562 1.36e-19 92.4
MS.gene25787.t1 AT5G38450 24.944 445 278 14 58 486 81 485 1.57e-19 92.0
MS.gene25787.t1 AT4G27710 25.115 434 251 15 81 488 103 488 3.44e-19 91.3
MS.gene25787.t1 AT3G14610 24.565 460 277 17 80 516 99 511 3.85e-19 90.9
MS.gene25787.t1 AT5G25120 23.969 509 314 20 1 487 1 458 4.27e-19 90.9
MS.gene25787.t1 AT1G64940 28.358 201 124 4 292 492 301 481 7.18e-19 90.1
MS.gene25787.t1 AT3G03470 22.465 503 337 14 40 517 35 509 1.62e-18 89.0
MS.gene25787.t1 AT3G48290 23.868 486 293 15 39 487 36 481 2.63e-18 88.6
MS.gene25787.t1 AT3G14660 26.736 288 177 8 239 516 102 365 2.69e-18 87.0
MS.gene25787.t1 AT2G46950 25.490 408 254 12 94 488 171 541 2.89e-18 88.6
MS.gene25787.t1 AT3G25180 23.810 378 256 11 128 497 130 483 4.63e-18 87.8
MS.gene25787.t1 AT3G10560 23.431 478 313 18 27 487 38 479 5.87e-18 87.4
MS.gene25787.t1 AT3G61040 27.126 247 148 7 250 487 238 461 1.12e-17 86.3
MS.gene25787.t1 AT4G13770 21.643 499 335 14 6 489 9 466 1.47e-17 85.9
MS.gene25787.t1 AT3G48320 21.600 500 326 12 1 487 8 454 1.81e-17 85.5
MS.gene25787.t1 AT2G24180 22.222 486 319 18 40 505 40 486 2.57e-17 85.1
MS.gene25787.t1 AT5G06905 23.429 525 348 20 5 509 8 498 2.59e-17 85.5
MS.gene25787.t1 AT5G25130 23.228 508 319 17 1 487 1 458 7.30e-17 84.0
MS.gene25787.t1 AT1G11610 24.101 473 289 16 40 487 34 461 8.58e-17 83.6
MS.gene25787.t1 AT1G11610 24.101 473 289 16 40 487 34 461 8.76e-17 83.6
MS.gene25787.t1 AT1G64930 27.363 201 128 4 292 492 299 481 1.21e-16 83.2
MS.gene25787.t1 AT2G12190 26.087 253 154 5 257 492 246 482 6.21e-16 80.9
MS.gene25787.t1 AT1G64950 26.087 253 152 5 257 492 246 480 6.87e-16 80.9
MS.gene25787.t1 AT1G16410 22.081 471 318 14 40 486 49 494 3.73e-15 78.6
MS.gene25787.t1 AT5G09970 22.754 501 337 21 5 487 35 503 7.94e-15 77.8
MS.gene25787.t1 AT1G67110 25.132 378 236 8 118 486 140 479 8.46e-15 77.4
MS.gene25787.t1 AT5G42590 21.921 479 327 14 37 499 30 477 8.55e-15 77.4
MS.gene25787.t1 AT5G05260 23.418 474 317 18 40 491 44 493 8.60e-15 77.4
MS.gene25787.t1 AT4G37430 20.875 503 338 17 2 487 1 460 9.68e-15 77.0
MS.gene25787.t1 AT2G30750 23.045 486 308 17 27 489 21 463 1.51e-14 76.6
MS.gene25787.t1 AT1G33720 21.042 499 342 16 5 487 10 472 1.62e-14 76.6
MS.gene25787.t1 AT5G04330 22.222 468 308 14 40 486 36 468 1.78e-14 76.3
MS.gene25787.t1 AT2G22330 22.892 498 333 16 9 487 36 501 2.94e-14 75.9
MS.gene25787.t1 AT5G57260 20.892 493 341 14 39 517 33 490 2.97e-14 75.9
MS.gene25787.t1 AT2G22330 22.892 498 333 16 9 487 59 524 3.42e-14 75.9
MS.gene25787.t1 AT1G01190 22.152 474 297 19 40 490 77 501 4.65e-14 75.1
MS.gene25787.t1 AT3G61880 22.458 472 319 21 29 487 59 496 4.94e-14 75.1
MS.gene25787.t1 AT5G05260 23.077 468 294 15 40 491 44 461 5.38e-14 74.7
MS.gene25787.t1 AT1G01190 22.152 474 297 19 40 490 82 506 5.66e-14 75.1
MS.gene25787.t1 AT3G61880 22.458 472 319 21 29 487 59 496 6.71e-14 74.7
MS.gene25787.t1 AT1G33720 25.664 226 142 6 265 487 138 340 1.01e-13 73.2
MS.gene25787.t1 AT1G33720 25.664 226 142 6 265 487 138 340 1.01e-13 73.2
MS.gene25787.t1 AT1G33720 25.664 226 142 6 265 487 138 340 1.01e-13 73.2
MS.gene25787.t1 AT4G39950 22.490 498 335 16 8 486 33 498 1.31e-13 73.9
MS.gene25787.t1 AT1G19630 23.881 268 175 6 256 518 233 476 1.49e-13 73.6
MS.gene25787.t1 AT4G39950 22.490 498 335 16 8 486 73 538 1.75e-13 73.6
MS.gene25787.t1 AT1G01280 22.551 439 275 14 79 487 70 473 1.85e-13 73.2
MS.gene25787.t1 AT5G25180 22.270 467 303 15 40 487 33 458 2.02e-13 73.2
MS.gene25787.t1 AT5G24960 21.830 481 309 14 33 489 27 464 3.92e-13 72.0
MS.gene25787.t1 AT1G16400 25.490 255 159 6 244 486 258 493 5.68e-13 71.6
MS.gene25787.t1 AT3G26330 21.645 462 316 15 39 487 34 462 6.03e-13 71.6
MS.gene25787.t1 AT3G26290 21.875 480 315 16 27 487 24 462 8.07e-13 71.2
MS.gene25787.t1 AT3G26290 21.875 480 315 16 27 487 37 475 1.08e-12 70.9
MS.gene25787.t1 AT2G25160 23.396 530 325 21 2 494 3 488 1.09e-12 70.9
MS.gene25787.t1 AT3G53280 22.747 466 306 16 40 487 32 461 1.19e-12 70.5
MS.gene25787.t1 AT4G36220 24.887 221 138 6 266 486 287 479 3.69e-12 69.3
MS.gene25787.t1 AT3G26230 21.373 510 329 17 8 489 1 466 4.27e-12 68.9
MS.gene25787.t1 AT4G22690 22.196 428 278 12 80 487 124 516 1.31e-11 67.4
MS.gene25787.t1 AT4G37410 21.386 505 340 18 2 492 1 462 1.42e-11 67.4
MS.gene25787.t1 AT4G22710 22.038 422 286 11 80 487 93 485 1.57e-11 67.0
MS.gene25787.t1 AT3G44250 23.077 468 303 17 40 487 32 462 2.03e-11 66.6
MS.gene25787.t1 AT4G31970 24.242 297 187 11 244 523 247 522 2.38e-11 66.6
MS.gene25787.t1 AT3G32047 21.973 446 291 16 86 509 87 497 3.14e-11 66.2
MS.gene25787.t1 AT1G19630 24.889 225 140 6 256 475 233 433 3.23e-11 65.9
MS.gene25787.t1 AT5G10600 22.782 496 330 19 3 487 21 474 4.05e-11 65.9
MS.gene25787.t1 AT4G37360 22.908 502 315 17 3 487 10 456 5.05e-11 65.5
MS.gene25787.t1 AT5G25900 26.178 191 116 4 299 487 309 476 5.88e-11 65.5
MS.gene25787.t1 AT5G67310 21.786 459 311 15 40 487 46 467 6.17e-11 65.1
MS.gene25787.t1 AT1G58260 25.882 255 159 9 245 487 251 487 7.86e-11 65.1

Find 132 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAATGACGTGGCTTCTT+TGG 0.190026 3.2:+70716678 MS.gene25787:CDS
TTTAGGGAAGTTGGTGAAAT+TGG 0.235193 3.2:-70716039 None:intergenic
CAAGAGGAATTGATAGTAAA+AGG 0.261237 3.2:+70716722 MS.gene25787:CDS
TTGCTTGAATTAGCTTCTAA+TGG 0.266311 3.2:+70716236 MS.gene25787:CDS
TGGAACGTATGGCCGCAAAA+TGG 0.284925 3.2:+70717300 MS.gene25787:CDS
TTCTGAACCAATTTGAAATT+AGG 0.289436 3.2:+70717185 MS.gene25787:CDS
TGGCTATGATCCTTGTTGTT+TGG 0.310845 3.2:+70716328 MS.gene25787:CDS
AATCAGTGAACGAGATAATA+AGG 0.325511 3.2:+70716513 MS.gene25787:CDS
TGGGGAGGATGGAGGCCCTA+TGG 0.339724 3.2:+70716975 MS.gene25787:CDS
ATTCACCGATTCATTTGATT+TGG 0.345150 3.2:+70716423 MS.gene25787:CDS
ATACAGGCCTAATTTCAAAT+TGG 0.345276 3.2:-70717192 None:intergenic
TGAATATGCCGCAACCTAAA+AGG 0.349199 3.2:-70716091 None:intergenic
TGGTCAAAACAACGTAAAAT+AGG 0.356556 3.2:+70716131 MS.gene25787:CDS
ATGAAGGAGGGGTGTGAGTA+GGG 0.365515 3.2:-70715845 None:intergenic
ATCATTGTTGGCGGCATGCT+TGG 0.372540 3.2:-70716891 None:intergenic
GTCCACAAAAGAGTTCAAAA+TGG 0.376346 3.2:+70717280 MS.gene25787:CDS
GGGTTGTGAAGTGTGAAATA+TGG 0.386977 3.2:-70715824 None:intergenic
ATGTGTTGCCGGACGGAACT+AGG 0.390227 3.2:+70716912 MS.gene25787:CDS
TTTCTTACGGCTTATATGGC+TGG 0.398987 3.2:+70717241 MS.gene25787:CDS
GCCTGTATCTATTGACCAAC+CGG 0.407542 3.2:+70717207 MS.gene25787:CDS
GAGACCTCGTTGTGAATTCA+TGG 0.411300 3.2:-70716157 None:intergenic
ACTATCAATTCCTCTTGGCT+TGG 0.414384 3.2:-70716716 None:intergenic
CCTCCTTCATACCCCATCAT+AGG 0.427095 3.2:+70715858 MS.gene25787:CDS
TGCGGCATATTCAATGTAGA+TGG 0.439908 3.2:+70716101 MS.gene25787:CDS
TGAGATAAGGCAACCTATGA+TGG 0.439954 3.2:-70715871 None:intergenic
GCCATATAAGCCGTAAGAAA+AGG 0.445292 3.2:-70717238 None:intergenic
GGAACGTATGGCCGCAAAAT+GGG 0.445591 3.2:+70717301 MS.gene25787:CDS
CGCCAACAATGATGTGTTGC+CGG 0.445745 3.2:+70716901 MS.gene25787:CDS
GGGGAGGATGGAGGCCCTAT+GGG 0.456336 3.2:+70716976 MS.gene25787:CDS
GTCCGGCAACACATCATTGT+TGG 0.456658 3.2:-70716903 None:intergenic
AGTGAAAGAAATAATGTTAG+TGG 0.459504 3.2:+70716554 MS.gene25787:CDS
GGATTGTTTGAGTTGGAGAT+TGG 0.460295 3.2:-70715944 None:intergenic
TCCTTATGGGATGGGGAGGA+TGG 0.462401 3.2:+70716964 MS.gene25787:CDS
CCCAAGACAGACTCTTGGAC+CGG 0.464123 3.2:-70717119 None:intergenic
TATGAAGGAGGGGTGTGAGT+AGG 0.468082 3.2:-70715846 None:intergenic
GTTGTATCCACCGGTGGCGT+GGG 0.469782 3.2:+70716865 MS.gene25787:CDS
AGAGCGGTGGTTTGATGAAC+CGG 0.474395 3.2:+70717024 MS.gene25787:CDS
ATCTTCCAAATCAAATGAAT+CGG 0.475185 3.2:-70716428 None:intergenic
TGATTTGTTGACAAAGTTGT+TGG 0.479366 3.2:+70716580 MS.gene25787:CDS
AGGCCCTATGGGGTAAAGAT+TGG 0.481535 3.2:+70716987 MS.gene25787:CDS
GAGAGGGTTGGCGGTTATGA+TGG 0.481620 3.2:-70715994 None:intergenic
GATTGTTTGAGTTGGAGATT+GGG 0.483049 3.2:-70715943 None:intergenic
GGTGAGTGTAGAAATCTAGA+AGG 0.485583 3.2:-70715914 None:intergenic
ACCGGTTGGTCAATAGATAC+AGG 0.486135 3.2:-70717208 None:intergenic
GGTTGGCGGTTATGATGGTT+CGG 0.489026 3.2:-70715989 None:intergenic
TCTTTCCCAAGACAGACTCT+TGG 0.491988 3.2:-70717124 None:intergenic
TCCATCCTCCCCATCCCATA+AGG 0.493189 3.2:-70716965 None:intergenic
AATTTCACCAACTTCCCTAA+AGG 0.493898 3.2:+70716041 MS.gene25787:CDS
TAGAAGCTAATTCAAGCAAT+GGG 0.496987 3.2:-70716232 None:intergenic
TTCTCTTGAAGAGAAGGAAG+AGG 0.497147 3.2:-70715776 None:intergenic
TTCGACATTGAGAGGGTTGG+CGG 0.498527 3.2:-70716003 None:intergenic
CCGGTCCAAGAGTCTGTCTT+GGG 0.499909 3.2:+70717119 MS.gene25787:CDS
CATTCCAATCTTTACCCCAT+AGG 0.501351 3.2:-70716991 None:intergenic
TGAAATCATGGTGAGAGATA+TGG 0.509926 3.2:+70716616 MS.gene25787:CDS
GAGTTGGAGATTGGGAGAGA+AGG 0.510263 3.2:-70715935 None:intergenic
GCGCGCCGAGGCGGTTGATG+AGG 0.510855 3.2:-70715965 None:intergenic
GGTTGTATCCACCGGTGGCG+TGG 0.510914 3.2:+70716864 MS.gene25787:CDS
GGTTCATCAAACCACCGCTC+TGG 0.511673 3.2:-70717022 None:intergenic
CTTACGGCTTATATGGCTGG+TGG 0.513738 3.2:+70717244 MS.gene25787:CDS
CAACCTATGATGGGGTATGA+AGG 0.520012 3.2:-70715861 None:intergenic
CGAGCGTATTGCACTTATCT+CGG 0.520238 3.2:-70716399 None:intergenic
GTCAATGAGGTTGTATCCAC+CGG 0.522300 3.2:+70716856 MS.gene25787:CDS
ATCAAGAGGGTGCTTAATGT+AGG 0.522695 3.2:+70716449 MS.gene25787:CDS
ATTCCAATCTTTACCCCATA+GGG 0.522750 3.2:-70716990 None:intergenic
GAGATAAGGCAACCTATGAT+GGG 0.525952 3.2:-70715870 None:intergenic
TTGATGAGGATTGTTTGAGT+TGG 0.526092 3.2:-70715951 None:intergenic
AGAGTTCAAAATGGAACGTA+TGG 0.527586 3.2:+70717289 MS.gene25787:CDS
GCCGGTCCAAGAGTCTGTCT+TGG 0.527649 3.2:+70717118 MS.gene25787:CDS
TGCTTGGAATCCCACGCCAC+CGG 0.531138 3.2:-70716875 None:intergenic
TTACGGCTTATATGGCTGGT+GGG 0.532263 3.2:+70717245 MS.gene25787:CDS
CCTATGATGGGGTATGAAGG+AGG 0.532715 3.2:-70715858 None:intergenic
GACGGAACTAGGGTTGGAAA+AGG 0.534176 3.2:+70716923 MS.gene25787:CDS
GTATTATTCTCTTGAAGAGA+AGG 0.534368 3.2:-70715782 None:intergenic
TGACAAAGTTGTTGGAAGGA+GGG 0.534427 3.2:+70716588 MS.gene25787:CDS
ATTGATAGTAAAAGGAGTGA+GGG 0.534790 3.2:+70716730 MS.gene25787:CDS
AAGGAGGTAATAATAACGAC+GGG 0.535915 3.2:+70717053 MS.gene25787:CDS
TTATTACCTCCTTCTCCGAC+CGG 0.537195 3.2:-70717043 None:intergenic
TTGACAAAGTTGTTGGAAGG+AGG 0.537337 3.2:+70716587 MS.gene25787:CDS
AGGATGTATTCGACATTGAG+AGG 0.544989 3.2:-70716011 None:intergenic
TTAGAAGCTAATTCAAGCAA+TGG 0.545493 3.2:-70716233 None:intergenic
GCCGACAAAAGTGGTGGCAA+AGG 0.545526 3.2:-70716362 None:intergenic
TTATGGGATGGGGAGGATGG+AGG 0.547320 3.2:+70716967 MS.gene25787:CDS
GTGAAAGAAATAATGTTAGT+GGG 0.548453 3.2:+70716555 MS.gene25787:CDS
TCGCTAAGAATTTCAGTGAA+GGG 0.548678 3.2:-70716068 None:intergenic
TTTGATGAACCGGTCGGAGA+AGG 0.548694 3.2:+70717034 MS.gene25787:CDS
CTATGATGGGGTATGAAGGA+GGG 0.550443 3.2:-70715857 None:intergenic
TTTCCAACCCTAGTTCCGTC+CGG 0.551868 3.2:-70716920 None:intergenic
AATTGATAGTAAAAGGAGTG+AGG 0.554403 3.2:+70716729 MS.gene25787:CDS
GGGAGGATGGAGGCCCTATG+GGG 0.554449 3.2:+70716977 MS.gene25787:CDS
TGAAGGAGGGGTGTGAGTAG+GGG 0.558526 3.2:-70715844 None:intergenic
TGGTTCGGCGCGCGCCGAGG+CGG 0.560416 3.2:-70715974 None:intergenic
CGACGTCGGCGGCAATGACG+TGG 0.561968 3.2:+70716669 MS.gene25787:CDS
CATCTTGCATGTCAATAACA+TGG 0.564610 3.2:-70716262 None:intergenic
TATTCAAATGGAATATGTCG+TGG 0.564798 3.2:+70717156 MS.gene25787:CDS
GTATTCGACATTGAGAGGGT+TGG 0.566083 3.2:-70716006 None:intergenic
TGATGGTTCGGCGCGCGCCG+AGG 0.570570 3.2:-70715977 None:intergenic
TCAAGAGGGTGCTTAATGTA+GGG 0.570846 3.2:+70716450 MS.gene25787:CDS
ATTTGATTTGGAAGATCAAG+AGG 0.571670 3.2:+70716435 MS.gene25787:CDS
TGGCCGCAAAATGGGAGCAT+AGG 0.573339 3.2:+70717309 MS.gene25787:CDS
TTGCCGGACGGAACTAGGGT+TGG 0.573574 3.2:+70716917 MS.gene25787:CDS
TTGTCGAACGCCGACAAAAG+TGG 0.574998 3.2:-70716371 None:intergenic
AACAATGATGTGTTGCCGGA+CGG 0.575536 3.2:+70716905 MS.gene25787:CDS
AGGAGGGCATGATGAAATCA+TGG 0.577588 3.2:+70716604 MS.gene25787:CDS
CTTGTTTGTGTGAGTCAATG+AGG 0.578710 3.2:+70716843 MS.gene25787:CDS
CGGCAACACATCATTGTTGG+CGG 0.585858 3.2:-70716900 None:intergenic
GATGAACCGGTCGGAGAAGG+AGG 0.587866 3.2:+70717037 MS.gene25787:CDS
GTCGCTAAGAATTTCAGTGA+AGG 0.589215 3.2:-70716069 None:intergenic
TCAATGTAGATGGAAAGTTA+TGG 0.589687 3.2:+70716111 MS.gene25787:CDS
TGTGTTGCCGGACGGAACTA+GGG 0.594214 3.2:+70716913 MS.gene25787:CDS
GGATGTATTCGACATTGAGA+GGG 0.602263 3.2:-70716010 None:intergenic
TTGTTGACAAAGTTGTTGGA+AGG 0.603881 3.2:+70716584 MS.gene25787:CDS
TATGATGGGGTATGAAGGAG+GGG 0.610983 3.2:-70715856 None:intergenic
ACAATCCTCATCAACCGCCT+CGG 0.621473 3.2:+70715960 MS.gene25787:CDS
TGTAGAAATCTAGAAGGCGG+TGG 0.623230 3.2:-70715908 None:intergenic
AGGGAGAGACACGACGTCGG+CGG 0.628276 3.2:+70716658 MS.gene25787:CDS
TTGGAATCCCACGCCACCGG+TGG 0.637881 3.2:-70716872 None:intergenic
TTTGATTTGGAAGATCAAGA+GGG 0.646922 3.2:+70716436 MS.gene25787:CDS
ATTGTGTGTAAAGTTTCACT+TGG 0.649353 3.2:+70716308 MS.gene25787:CDS
GTCAAAGAATCCAAGCCAAG+AGG 0.650548 3.2:+70716706 MS.gene25787:CDS
AATGAGGTTGTATCCACCGG+TGG 0.662596 3.2:+70716859 MS.gene25787:CDS
ATGAGTTTAAACCAGAGCGG+TGG 0.665689 3.2:+70717011 MS.gene25787:CDS
CGGTGGTTTGATGAACCGGT+CGG 0.673234 3.2:+70717028 MS.gene25787:CDS
AGATAAGGCAACCTATGATG+GGG 0.673442 3.2:-70715869 None:intergenic
GAAGGAGGTAATAATAACGA+CGG 0.673705 3.2:+70717052 MS.gene25787:CDS
TCGAACGCCGACAAAAGTGG+TGG 0.689516 3.2:-70716368 None:intergenic
GAGTGTAGAAATCTAGAAGG+CGG 0.696130 3.2:-70715911 None:intergenic
GGCAGGGAGAGACACGACGT+CGG 0.719660 3.2:+70716655 MS.gene25787:CDS
AGTCTGTCTTGGGAAAGACA+TGG 0.721405 3.2:+70717129 MS.gene25787:CDS
GGAATGAGTTTAAACCAGAG+CGG 0.732383 3.2:+70717008 MS.gene25787:CDS
TTAGATAAATCCAAACAACA+AGG 0.735335 3.2:-70716338 None:intergenic
AGGAGGTAATAATAACGACG+GGG 0.780838 3.2:+70717054 MS.gene25787:CDS
GCAGCCATGAATTCACAACG+AGG 0.846461 3.2:+70716153 MS.gene25787:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGGTTATTAGTTTTATCA+TGG + chr3.2:70716634-70716653 MS.gene25787:CDS 20.0%
! AGTGAAAGAAATAATGTTAG+TGG + chr3.2:70716554-70716573 MS.gene25787:CDS 25.0%
! ATCTTCCAAATCAAATGAAT+CGG - chr3.2:70716431-70716450 None:intergenic 25.0%
! GTGAAAGAAATAATGTTAGT+GGG + chr3.2:70716555-70716574 MS.gene25787:CDS 25.0%
! TTAGATAAATCCAAACAACA+AGG - chr3.2:70716341-70716360 None:intergenic 25.0%
!! AAGTGTGAAATATGGTTTTT+GGG - chr3.2:70715819-70715838 None:intergenic 25.0%
!! TTCTGAACCAATTTGAAATT+AGG + chr3.2:70717185-70717204 MS.gene25787:CDS 25.0%
!!! ATGAGATCTTTTGATTATGA+AGG + chr3.2:70716794-70716813 MS.gene25787:CDS 25.0%
!!! TGTTTTTGTAGAATGAGATA+AGG - chr3.2:70715887-70715906 None:intergenic 25.0%
!!! TTATTAGTTTTATCATGGCA+GGG + chr3.2:70716639-70716658 MS.gene25787:CDS 25.0%
AATCAGTGAACGAGATAATA+AGG + chr3.2:70716513-70716532 MS.gene25787:CDS 30.0%
ATACAGGCCTAATTTCAAAT+TGG - chr3.2:70717195-70717214 None:intergenic 30.0%
ATTGTGTGTAAAGTTTCACT+TGG + chr3.2:70716308-70716327 MS.gene25787:CDS 30.0%
GAAAAACCGAAAACTTGTAA+GGG - chr3.2:70717096-70717115 None:intergenic 30.0%
GTAAGAAAAGGAACAAAAAC+CGG - chr3.2:70717229-70717248 None:intergenic 30.0%
GTATTATTCTCTTGAAGAGA+AGG - chr3.2:70715785-70715804 None:intergenic 30.0%
TAGAAGCTAATTCAAGCAAT+GGG - chr3.2:70716235-70716254 None:intergenic 30.0%
TATTCAAATGGAATATGTCG+TGG + chr3.2:70717156-70717175 MS.gene25787:CDS 30.0%
TCAATGTAGATGGAAAGTTA+TGG + chr3.2:70716111-70716130 MS.gene25787:CDS 30.0%
TGAAAAACCGAAAACTTGTA+AGG - chr3.2:70717097-70717116 None:intergenic 30.0%
TGGTCAAAACAACGTAAAAT+AGG + chr3.2:70716131-70716150 MS.gene25787:CDS 30.0%
TTAGAAGCTAATTCAAGCAA+TGG - chr3.2:70716236-70716255 None:intergenic 30.0%
! AATTGATAGTAAAAGGAGTG+AGG + chr3.2:70716729-70716748 MS.gene25787:CDS 30.0%
! AGACATGGCTTTTATTCAAA+TGG + chr3.2:70717144-70717163 MS.gene25787:CDS 30.0%
! ATTGATAGTAAAAGGAGTGA+GGG + chr3.2:70716730-70716749 MS.gene25787:CDS 30.0%
! CAAGAGGAATTGATAGTAAA+AGG + chr3.2:70716722-70716741 MS.gene25787:CDS 30.0%
! CTTTTACTATCAATTCCTCT+TGG - chr3.2:70716724-70716743 None:intergenic 30.0%
! GAAGTGTGAAATATGGTTTT+TGG - chr3.2:70715820-70715839 None:intergenic 30.0%
! GGTTTTTGTTCCTTTTCTTA+CGG + chr3.2:70717228-70717247 MS.gene25787:CDS 30.0%
! TTCCATTTTGAACTCTTTTG+TGG - chr3.2:70717285-70717304 None:intergenic 30.0%
! TTGCTTGAATTAGCTTCTAA+TGG + chr3.2:70716236-70716255 MS.gene25787:CDS 30.0%
!! ACTTATTTTCCTTATGGGAT+GGG + chr3.2:70716956-70716975 MS.gene25787:CDS 30.0%
!! AGAGTGACTTATTTTCCTTA+TGG + chr3.2:70716950-70716969 MS.gene25787:CDS 30.0%
!! ATTCACCGATTCATTTGATT+TGG + chr3.2:70716423-70716442 MS.gene25787:CDS 30.0%
!! ATTTGATTTGGAAGATCAAG+AGG + chr3.2:70716435-70716454 MS.gene25787:CDS 30.0%
!! GAGTGACTTATTTTCCTTAT+GGG + chr3.2:70716951-70716970 MS.gene25787:CDS 30.0%
!! TGATTTGTTGACAAAGTTGT+TGG + chr3.2:70716580-70716599 MS.gene25787:CDS 30.0%
!! TTTGATTTGGAAGATCAAGA+GGG + chr3.2:70716436-70716455 MS.gene25787:CDS 30.0%
!!! GTTATTAGTTTTATCATGGC+AGG + chr3.2:70716638-70716657 MS.gene25787:CDS 30.0%
AAGGAGGTAATAATAACGAC+GGG + chr3.2:70717053-70717072 MS.gene25787:CDS 35.0%
AATTTCACCAACTTCCCTAA+AGG + chr3.2:70716041-70716060 MS.gene25787:CDS 35.0%
AGAGTTCAAAATGGAACGTA+TGG + chr3.2:70717289-70717308 MS.gene25787:CDS 35.0%
ATTCCAATCTTTACCCCATA+GGG - chr3.2:70716993-70717012 None:intergenic 35.0%
CATCTTGCATGTCAATAACA+TGG - chr3.2:70716265-70716284 None:intergenic 35.0%
GAAGGAGGTAATAATAACGA+CGG + chr3.2:70717052-70717071 MS.gene25787:CDS 35.0%
GTCCACAAAAGAGTTCAAAA+TGG + chr3.2:70717280-70717299 MS.gene25787:CDS 35.0%
TCGCTAAGAATTTCAGTGAA+GGG - chr3.2:70716071-70716090 None:intergenic 35.0%
TGAAATCATGGTGAGAGATA+TGG + chr3.2:70716616-70716635 MS.gene25787:CDS 35.0%
TTGATGAGGATTGTTTGAGT+TGG - chr3.2:70715954-70715973 None:intergenic 35.0%
TTGTTGACAAAGTTGTTGGA+AGG + chr3.2:70716584-70716603 MS.gene25787:CDS 35.0%
! GAAATTCTTAGCGACCTTTT+AGG + chr3.2:70716077-70716096 MS.gene25787:CDS 35.0%
! TCCTTTTCTTACGGCTTATA+TGG + chr3.2:70717237-70717256 MS.gene25787:CDS 35.0%
! TTGACATGCAAGATGTTTTG+AGG + chr3.2:70716270-70716289 MS.gene25787:CDS 35.0%
!! CTTATTTTCCTTATGGGATG+GGG + chr3.2:70716957-70716976 MS.gene25787:CDS 35.0%
!! GACTTATTTTCCTTATGGGA+TGG + chr3.2:70716955-70716974 MS.gene25787:CDS 35.0%
!! GATTGTTTGAGTTGGAGATT+GGG - chr3.2:70715946-70715965 None:intergenic 35.0%
!! TTTAGGGAAGTTGGTGAAAT+TGG - chr3.2:70716042-70716061 None:intergenic 35.0%
!!! AAGTTTTCGGTTTTTCAAGC+CGG + chr3.2:70717100-70717119 MS.gene25787:CDS 35.0%
!!! AGTTGGTGAAATTGGTTTTG+AGG - chr3.2:70716034-70716053 None:intergenic 35.0%
ACTATCAATTCCTCTTGGCT+TGG - chr3.2:70716719-70716738 None:intergenic 40.0%
AGATAAGGCAACCTATGATG+GGG - chr3.2:70715872-70715891 None:intergenic 40.0%
AGGAGGTAATAATAACGACG+GGG + chr3.2:70717054-70717073 MS.gene25787:CDS 40.0%
AGGATGTATTCGACATTGAG+AGG - chr3.2:70716014-70716033 None:intergenic 40.0%
CATTCCAATCTTTACCCCAT+AGG - chr3.2:70716994-70717013 None:intergenic 40.0%
CTTGTTTGTGTGAGTCAATG+AGG + chr3.2:70716843-70716862 MS.gene25787:CDS 40.0%
GAAAAGGAACAAAAACCGGT+TGG - chr3.2:70717225-70717244 None:intergenic 40.0%
GAGATAAGGCAACCTATGAT+GGG - chr3.2:70715873-70715892 None:intergenic 40.0%
GAGTGTAGAAATCTAGAAGG+CGG - chr3.2:70715914-70715933 None:intergenic 40.0%
GCCATATAAGCCGTAAGAAA+AGG - chr3.2:70717241-70717260 None:intergenic 40.0%
GGAATGAGTTTAAACCAGAG+CGG + chr3.2:70717008-70717027 MS.gene25787:CDS 40.0%
GGATGTATTCGACATTGAGA+GGG - chr3.2:70716013-70716032 None:intergenic 40.0%
GGGTTGTGAAGTGTGAAATA+TGG - chr3.2:70715827-70715846 None:intergenic 40.0%
GGTGAGTGTAGAAATCTAGA+AGG - chr3.2:70715917-70715936 None:intergenic 40.0%
GTCGCTAAGAATTTCAGTGA+AGG - chr3.2:70716072-70716091 None:intergenic 40.0%
TGAATATGCCGCAACCTAAA+AGG - chr3.2:70716094-70716113 None:intergenic 40.0%
TGACAAAGTTGTTGGAAGGA+GGG + chr3.2:70716588-70716607 MS.gene25787:CDS 40.0%
TGAGATAAGGCAACCTATGA+TGG - chr3.2:70715874-70715893 None:intergenic 40.0%
TGCGGCATATTCAATGTAGA+TGG + chr3.2:70716101-70716120 MS.gene25787:CDS 40.0%
TTCTCTTGAAGAGAAGGAAG+AGG - chr3.2:70715779-70715798 None:intergenic 40.0%
TTGACAAAGTTGTTGGAAGG+AGG + chr3.2:70716587-70716606 MS.gene25787:CDS 40.0%
TTTCTTACGGCTTATATGGC+TGG + chr3.2:70717241-70717260 MS.gene25787:CDS 40.0%
! AAAGGAGTGAGGGAAGTTTT+TGG + chr3.2:70716740-70716759 MS.gene25787:CDS 40.0%
! CAGTGAAGGGTTTTCCTTTA+GGG - chr3.2:70716058-70716077 None:intergenic 40.0%
! TCAGTGAAGGGTTTTCCTTT+AGG - chr3.2:70716059-70716078 None:intergenic 40.0%
! TGTGAGCCCTTACAAGTTTT+CGG + chr3.2:70717087-70717106 MS.gene25787:CDS 40.0%
!! ATCAAGAGGGTGCTTAATGT+AGG + chr3.2:70716449-70716468 MS.gene25787:CDS 40.0%
!! GGATTGTTTGAGTTGGAGAT+TGG - chr3.2:70715947-70715966 None:intergenic 40.0%
!! TCAAGAGGGTGCTTAATGTA+GGG + chr3.2:70716450-70716469 MS.gene25787:CDS 40.0%
!! TGGCTATGATCCTTGTTGTT+TGG + chr3.2:70716328-70716347 MS.gene25787:CDS 40.0%
AACAATGATGTGTTGCCGGA+CGG + chr3.2:70716905-70716924 MS.gene25787:CDS 45.0%
AGTCTGTCTTGGGAAAGACA+TGG + chr3.2:70717129-70717148 MS.gene25787:CDS 45.0%
ATGAGTTTAAACCAGAGCGG+TGG + chr3.2:70717011-70717030 MS.gene25787:CDS 45.0%
CGAGCGTATTGCACTTATCT+CGG - chr3.2:70716402-70716421 None:intergenic 45.0%
GAGACCTCGTTGTGAATTCA+TGG - chr3.2:70716160-70716179 None:intergenic 45.0%
GCCTGTATCTATTGACCAAC+CGG + chr3.2:70717207-70717226 MS.gene25787:CDS 45.0%
GTATTCGACATTGAGAGGGT+TGG - chr3.2:70716009-70716028 None:intergenic 45.0%
GTCAAAGAATCCAAGCCAAG+AGG + chr3.2:70716706-70716725 MS.gene25787:CDS 45.0%
GTCAATGAGGTTGTATCCAC+CGG + chr3.2:70716856-70716875 MS.gene25787:CDS 45.0%
TCTTTCCCAAGACAGACTCT+TGG - chr3.2:70717127-70717146 None:intergenic 45.0%
TGTAGAAATCTAGAAGGCGG+TGG - chr3.2:70715911-70715930 None:intergenic 45.0%
TTACGGCTTATATGGCTGGT+GGG + chr3.2:70717245-70717264 MS.gene25787:CDS 45.0%
TTATTACCTCCTTCTCCGAC+CGG - chr3.2:70717046-70717065 None:intergenic 45.0%
! ACCGGTTGGTCAATAGATAC+AGG - chr3.2:70717211-70717230 None:intergenic 45.0%
! AGGAGGGCATGATGAAATCA+TGG + chr3.2:70716604-70716623 MS.gene25787:CDS 45.0%
! ATTTTCCTTATGGGATGGGG+AGG + chr3.2:70716960-70716979 MS.gene25787:CDS 45.0%
! CAACCTATGATGGGGTATGA+AGG - chr3.2:70715864-70715883 None:intergenic 45.0%
! CTATGATGGGGTATGAAGGA+GGG - chr3.2:70715860-70715879 None:intergenic 45.0%
! TATGATGGGGTATGAAGGAG+GGG - chr3.2:70715859-70715878 None:intergenic 45.0%
!! ACCTTTGCCACCACTTTTGT+CGG + chr3.2:70716361-70716380 MS.gene25787:CDS 45.0%
!! GGGTTTTCCTTTAGGGAAGT+TGG - chr3.2:70716051-70716070 None:intergenic 45.0%
!!! CTTAGCGACCTTTTAGGTTG+CGG + chr3.2:70716083-70716102 MS.gene25787:CDS 45.0%
AATGAGGTTGTATCCACCGG+TGG + chr3.2:70716859-70716878 MS.gene25787:CDS 50.0%
ACAATCCTCATCAACCGCCT+CGG + chr3.2:70715960-70715979 MS.gene25787:CDS 50.0%
AGAGCGGTGGTTTGATGAAC+CGG + chr3.2:70717024-70717043 MS.gene25787:CDS 50.0%
AGGCCCTATGGGGTAAAGAT+TGG + chr3.2:70716987-70717006 MS.gene25787:CDS 50.0%
ATCATTGTTGGCGGCATGCT+TGG - chr3.2:70716894-70716913 None:intergenic 50.0%
CCTCCTTCATACCCCATCAT+AGG + chr3.2:70715858-70715877 MS.gene25787:CDS 50.0%
CGCCAACAATGATGTGTTGC+CGG + chr3.2:70716901-70716920 MS.gene25787:CDS 50.0%
CGGCAACACATCATTGTTGG+CGG - chr3.2:70716903-70716922 None:intergenic 50.0%
CTTACGGCTTATATGGCTGG+TGG + chr3.2:70717244-70717263 MS.gene25787:CDS 50.0%
GACGGAACTAGGGTTGGAAA+AGG + chr3.2:70716923-70716942 MS.gene25787:CDS 50.0%
GAGTTGGAGATTGGGAGAGA+AGG - chr3.2:70715938-70715957 None:intergenic 50.0%
GCAGCCATGAATTCACAACG+AGG + chr3.2:70716153-70716172 MS.gene25787:CDS 50.0%
GGAACGTATGGCCGCAAAAT+GGG + chr3.2:70717301-70717320 MS.gene25787:CDS 50.0%
GGTTGGCGGTTATGATGGTT+CGG - chr3.2:70715992-70716011 None:intergenic 50.0%
GTCCGGCAACACATCATTGT+TGG - chr3.2:70716906-70716925 None:intergenic 50.0%
TGGAACGTATGGCCGCAAAA+TGG + chr3.2:70717300-70717319 MS.gene25787:CDS 50.0%
TTCGACATTGAGAGGGTTGG+CGG - chr3.2:70716006-70716025 None:intergenic 50.0%
TTGTCGAACGCCGACAAAAG+TGG - chr3.2:70716374-70716393 None:intergenic 50.0%
TTTCCAACCCTAGTTCCGTC+CGG - chr3.2:70716923-70716942 None:intergenic 50.0%
TTTGATGAACCGGTCGGAGA+AGG + chr3.2:70717034-70717053 MS.gene25787:CDS 50.0%
! ATGAAGGAGGGGTGTGAGTA+GGG - chr3.2:70715848-70715867 None:intergenic 50.0%
! CCTATGATGGGGTATGAAGG+AGG - chr3.2:70715861-70715880 None:intergenic 50.0%
! TATGAAGGAGGGGTGTGAGT+AGG - chr3.2:70715849-70715868 None:intergenic 50.0%
!! GGAGTGAGGGAAGTTTTTGG+AGG + chr3.2:70716743-70716762 MS.gene25787:CDS 50.0%
ATGTGTTGCCGGACGGAACT+AGG + chr3.2:70716912-70716931 MS.gene25787:CDS 55.0%
CCCAAGACAGACTCTTGGAC+CGG - chr3.2:70717122-70717141 None:intergenic 55.0%
CCGGTCCAAGAGTCTGTCTT+GGG + chr3.2:70717119-70717138 MS.gene25787:CDS 55.0%
CGGCAATGACGTGGCTTCTT+TGG + chr3.2:70716678-70716697 MS.gene25787:CDS 55.0%
CGGTGGTTTGATGAACCGGT+CGG + chr3.2:70717028-70717047 MS.gene25787:CDS 55.0%
GCCGACAAAAGTGGTGGCAA+AGG - chr3.2:70716365-70716384 None:intergenic 55.0%
GGTTCATCAAACCACCGCTC+TGG - chr3.2:70717025-70717044 None:intergenic 55.0%
TCCATCCTCCCCATCCCATA+AGG - chr3.2:70716968-70716987 None:intergenic 55.0%
TCCTTATGGGATGGGGAGGA+TGG + chr3.2:70716964-70716983 MS.gene25787:CDS 55.0%
TCGAACGCCGACAAAAGTGG+TGG - chr3.2:70716371-70716390 None:intergenic 55.0%
TGTGTTGCCGGACGGAACTA+GGG + chr3.2:70716913-70716932 MS.gene25787:CDS 55.0%
TTATGGGATGGGGAGGATGG+AGG + chr3.2:70716967-70716986 MS.gene25787:CDS 55.0%
! GAGAGGGTTGGCGGTTATGA+TGG - chr3.2:70715997-70716016 None:intergenic 55.0%
! TGAAGGAGGGGTGTGAGTAG+GGG - chr3.2:70715847-70715866 None:intergenic 55.0%
GATGAACCGGTCGGAGAAGG+AGG + chr3.2:70717037-70717056 MS.gene25787:CDS 60.0%
GCCGGTCCAAGAGTCTGTCT+TGG + chr3.2:70717118-70717137 MS.gene25787:CDS 60.0%
GTTGTATCCACCGGTGGCGT+GGG + chr3.2:70716865-70716884 MS.gene25787:CDS 60.0%
TGCTTGGAATCCCACGCCAC+CGG - chr3.2:70716878-70716897 None:intergenic 60.0%
TTGCCGGACGGAACTAGGGT+TGG + chr3.2:70716917-70716936 MS.gene25787:CDS 60.0%
AGGGAGAGACACGACGTCGG+CGG + chr3.2:70716658-70716677 MS.gene25787:CDS 65.0%
GGCAGGGAGAGACACGACGT+CGG + chr3.2:70716655-70716674 MS.gene25787:CDS 65.0%
GGGAGGATGGAGGCCCTATG+GGG + chr3.2:70716977-70716996 MS.gene25787:CDS 65.0%
GGGGAGGATGGAGGCCCTAT+GGG + chr3.2:70716976-70716995 MS.gene25787:CDS 65.0%
GGTTGTATCCACCGGTGGCG+TGG + chr3.2:70716864-70716883 MS.gene25787:CDS 65.0%
TGGGGAGGATGGAGGCCCTA+TGG + chr3.2:70716975-70716994 MS.gene25787:CDS 65.0%
TTGGAATCCCACGCCACCGG+TGG - chr3.2:70716875-70716894 None:intergenic 65.0%
CGACGTCGGCGGCAATGACG+TGG + chr3.2:70716669-70716688 MS.gene25787:CDS 70.0%
! GCGCGCCGAGGCGGTTGATG+AGG - chr3.2:70715968-70715987 None:intergenic 75.0%
! TGATGGTTCGGCGCGCGCCG+AGG - chr3.2:70715980-70715999 None:intergenic 75.0%
!! TGGTTCGGCGCGCGCCGAGG+CGG - chr3.2:70715977-70715996 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 70715741 70717330 70715741 ID=MS.gene25787
chr3.2 mRNA 70715741 70717330 70715741 ID=MS.gene25787.t1;Parent=MS.gene25787
chr3.2 exon 70715741 70717330 70715741 ID=MS.gene25787.t1.exon1;Parent=MS.gene25787.t1
chr3.2 CDS 70715741 70717330 70715741 ID=cds.MS.gene25787.t1;Parent=MS.gene25787.t1
Gene Sequence

>MS.gene25787

ATGTTGTTCTACTACATTTTCTTTGCTATTATCTTCCTCTTCCTTCTCTTCAAGAGAATAATACTAACTCACAATCCCAAAAACCATATTTCACACTTCACAACCCCTACTCACACCCCTCCTTCATACCCCATCATAGGTTGCCTTATCTCATTCTACAAAAACAGCCACCGCCTTCTAGATTTCTACACTCACCTTCTCTCCCAATCTCCAACTCAAACAATCCTCATCAACCGCCTCGGCGCGCGCCGAACCATCATAACCGCCAACCCTCTCAATGTCGAATACATCCTCAAAACCAATTTCACCAACTTCCCTAAAGGAAAACCCTTCACTGAAATTCTTAGCGACCTTTTAGGTTGCGGCATATTCAATGTAGATGGAAAGTTATGGTCAAAACAACGTAAAATAGGCAGCCATGAATTCACAACGAGGTCTCTCAAAGACTTTGTTGCGAAGACACTTGAAGATGAAGTTCAACAAAGACTTATCCCATTGCTTGAATTAGCTTCTAATGGAAACCATGTTATTGACATGCAAGATGTTTTGAGGAGACTCACGTTTGAAATTGTGTGTAAAGTTTCACTTGGCTATGATCCTTGTTGTTTGGATTTATCTAAACCTTTGCCACCACTTTTGTCGGCGTTCGACAAAGCTTCCGAGATAAGTGCAATACGCTCGCATTCACCGATTCATTTGATTTGGAAGATCAAGAGGGTGCTTAATGTAGGGTCTGAGAAATTGCTTAAAGAAGCTGTTAAACTCGTTCATGAATCAGTGAACGAGATAATAAGGAAGAAGAAGAAAGAAATTAGTGAAAGAAATAATGTTAGTGGGAGTGATTTGTTGACAAAGTTGTTGGAAGGAGGGCATGATGAAATCATGGTGAGAGATATGGTTATTAGTTTTATCATGGCAGGGAGAGACACGACGTCGGCGGCAATGACGTGGCTTCTTTGGTTGTTGTCAAAGAATCCAAGCCAAGAGGAATTGATAGTAAAAGGAGTGAGGGAAGTTTTTGGAGGAAAAAATAATGATGATGAGTTTGAGTTGATGAGATCTTTTGATTATGAAGGTTTGAAAGAGATGAAATATTTGAAAGCTTGTTTGTGTGAGTCAATGAGGTTGTATCCACCGGTGGCGTGGGATTCCAAGCATGCCGCCAACAATGATGTGTTGCCGGACGGAACTAGGGTTGGAAAAGGCGATAGAGTGACTTATTTTCCTTATGGGATGGGGAGGATGGAGGCCCTATGGGGTAAAGATTGGAATGAGTTTAAACCAGAGCGGTGGTTTGATGAACCGGTCGGAGAAGGAGGTAATAATAACGACGGGGTTTTGAAATATGTGAGCCCTTACAAGTTTTCGGTTTTTCAAGCCGGTCCAAGAGTCTGTCTTGGGAAAGACATGGCTTTTATTCAAATGGAATATGTCGTGGCTTCGATTCTGAACCAATTTGAAATTAGGCCTGTATCTATTGACCAACCGGTTTTTGTTCCTTTTCTTACGGCTTATATGGCTGGTGGGTTCAACGTGAGAGTCCACAAAAGAGTTCAAAATGGAACGTATGGCCGCAAAATGGGAGCATAG

Protein sequence

>MS.gene25787.t1

MLFYYIFFAIIFLFLLFKRIILTHNPKNHISHFTTPTHTPPSYPIIGCLISFYKNSHRLLDFYTHLLSQSPTQTILINRLGARRTIITANPLNVEYILKTNFTNFPKGKPFTEILSDLLGCGIFNVDGKLWSKQRKIGSHEFTTRSLKDFVAKTLEDEVQQRLIPLLELASNGNHVIDMQDVLRRLTFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAIRSHSPIHLIWKIKRVLNVGSEKLLKEAVKLVHESVNEIIRKKKKEISERNNVSGSDLLTKLLEGGHDEIMVRDMVISFIMAGRDTTSAAMTWLLWLLSKNPSQEELIVKGVREVFGGKNNDDEFELMRSFDYEGLKEMKYLKACLCESMRLYPPVAWDSKHAANNDVLPDGTRVGKGDRVTYFPYGMGRMEALWGKDWNEFKPERWFDEPVGEGGNNNDGVLKYVSPYKFSVFQAGPRVCLGKDMAFIQMEYVVASILNQFEIRPVSIDQPVFVPFLTAYMAGGFNVRVHKRVQNGTYGRKMGA