AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032644


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032644.t1 MTR_6g004630 97.822 505 10 1 3 506 1 505 0.0 1020
MS.gene032644.t1 MTR_6g004610 90.260 462 45 0 42 503 1 462 0.0 880
MS.gene032644.t1 MTR_6g004670 82.016 506 88 3 1 504 1 505 0.0 866
MS.gene032644.t1 MTR_6g004600 63.320 518 177 5 1 506 1 517 0.0 665
MS.gene032644.t1 MTR_6g004590 62.934 518 179 4 1 506 1 517 0.0 657
MS.gene032644.t1 MTR_8g088470 55.622 498 208 5 9 504 5 491 0.0 566
MS.gene032644.t1 MTR_7g033580 53.846 507 222 5 1 506 1 496 0.0 555
MS.gene032644.t1 MTR_7g033570 54.582 502 220 4 6 506 2 496 0.0 553
MS.gene032644.t1 MTR_1g036200 51.351 518 217 10 3 504 1 499 4.91e-177 507
MS.gene032644.t1 MTR_1g035790 50.391 512 236 9 1 504 1 502 4.64e-175 502
MS.gene032644.t1 MTR_1g035750 49.703 505 242 6 10 506 7 507 4.60e-172 495
MS.gene032644.t1 MTR_1g035670 48.996 498 242 6 14 504 10 502 8.62e-172 494
MS.gene032644.t1 MTR_1g036130 47.358 511 257 6 1 504 1 506 3.98e-167 482
MS.gene032644.t1 MTR_1g035580 47.665 514 241 8 1 504 1 496 1.40e-165 478
MS.gene032644.t1 MTR_1g035760 48.283 495 225 6 17 506 13 481 1.70e-165 477
MS.gene032644.t1 MTR_1g050362 48.249 514 246 10 3 504 1 506 8.51e-165 476
MS.gene032644.t1 MTR_1g035800 48.356 517 249 8 1 504 1 512 1.13e-163 474
MS.gene032644.t1 MTR_1g036270 46.435 519 259 9 1 506 1 513 1.73e-162 471
MS.gene032644.t1 MTR_1g036010 47.619 504 249 9 14 506 10 509 1.39e-161 468
MS.gene032644.t1 MTR_1g035830 47.421 504 250 9 14 506 10 509 3.52e-160 464
MS.gene032644.t1 MTR_1g035940 46.394 513 261 8 4 506 1 509 5.15e-160 464
MS.gene032644.t1 MTR_1g035860 47.285 442 223 6 9 446 15 450 7.02e-140 412
MS.gene032644.t1 MTR_1g069715 49.510 408 186 7 88 481 1 402 1.23e-139 418
MS.gene032644.t1 MTR_1g037560 38.258 528 296 9 3 504 20 543 6.62e-125 376
MS.gene032644.t1 MTR_1g037550 37.805 492 285 8 30 504 60 547 1.95e-114 349
MS.gene032644.t1 MTR_4g075110 36.667 510 301 10 9 505 50 550 1.13e-109 337
MS.gene032644.t1 MTR_8g030590 36.398 522 300 11 2 506 6 512 5.11e-108 332
MS.gene032644.t1 MTR_8g098435 34.556 518 310 11 2 506 6 507 1.23e-98 307
MS.gene032644.t1 MTR_5g070010 36.066 488 283 9 37 506 34 510 2.35e-98 306
MS.gene032644.t1 MTR_3g080580 34.433 485 291 8 37 504 43 517 1.06e-92 292
MS.gene032644.t1 MTR_3g463060 34.719 481 288 8 37 506 39 504 7.20e-92 289
MS.gene032644.t1 MTR_4g012320 60.748 214 83 1 294 506 12 225 4.98e-91 277
MS.gene032644.t1 MTR_7g029275 32.809 509 311 10 12 504 15 508 8.46e-88 279
MS.gene032644.t1 MTR_7g096340 33.641 434 261 9 82 504 85 502 2.17e-85 272
MS.gene032644.t1 MTR_1g070365 30.994 513 330 10 1 504 7 504 7.98e-84 268
MS.gene032644.t1 MTR_7g096320 33.102 432 266 8 82 504 86 503 3.14e-82 264
MS.gene032644.t1 MTR_7g088330 32.824 524 303 17 5 504 10 508 3.90e-82 264
MS.gene032644.t1 MTR_4g119660 30.608 526 323 11 10 504 1 515 1.91e-81 262
MS.gene032644.t1 MTR_5g019140 30.550 527 324 11 10 505 16 531 9.00e-81 261
MS.gene032644.t1 MTR_8g035860 32.172 488 300 13 6 480 15 484 7.97e-80 258
MS.gene032644.t1 MTR_1g070345 32.150 479 299 12 37 505 43 505 9.60e-80 258
MS.gene032644.t1 MTR_1g060550 34.332 434 260 9 82 504 93 512 9.95e-79 255
MS.gene032644.t1 MTR_4g054920 31.545 466 285 11 55 504 69 516 3.47e-78 254
MS.gene032644.t1 MTR_1g102220 29.876 482 307 11 37 504 42 506 5.38e-78 253
MS.gene032644.t1 MTR_8g035810 31.837 490 304 13 4 480 13 485 1.36e-77 252
MS.gene032644.t1 MTR_8g035820 32.449 490 300 13 4 480 13 484 1.47e-77 252
MS.gene032644.t1 MTR_2g086040 30.522 498 313 11 12 504 29 498 1.98e-77 251
MS.gene032644.t1 MTR_8g035780 34.136 457 264 13 30 470 40 475 4.96e-77 251
MS.gene032644.t1 MTR_7g406990 37.989 358 202 9 34 379 47 396 5.58e-73 238
MS.gene032644.t1 MTR_8g035680 26.819 481 323 11 37 504 48 512 4.06e-67 225
MS.gene032644.t1 MTR_8g035810 31.360 456 283 13 4 446 13 451 4.24e-66 221
MS.gene032644.t1 MTR_8g035760 27.651 481 320 12 37 505 48 512 5.51e-66 222
MS.gene032644.t1 MTR_8g035680 27.247 356 237 7 161 504 20 365 4.54e-50 176
MS.gene032644.t1 MTR_8g035810 30.052 386 243 11 4 377 13 383 2.09e-46 166
MS.gene032644.t1 MTR_1g102210 29.091 330 205 6 170 496 49 352 7.17e-44 159
MS.gene032644.t1 MTR_1g070370 35.317 252 147 5 173 422 5 242 2.70e-43 154
MS.gene032644.t1 MTR_6g084040 40.116 172 83 3 17 187 13 165 3.61e-35 129
MS.gene032644.t1 MTR_7g079440 24.550 444 299 15 76 504 226 648 1.05e-30 126
MS.gene032644.t1 MTR_6g004570 63.462 104 27 3 243 335 1 104 2.24e-30 119
MS.gene032644.t1 MTR_1g040110 47.321 112 56 1 129 237 56 167 4.90e-27 107
MS.gene032644.t1 MTR_5g009110 24.416 471 303 14 76 504 111 570 3.25e-26 112
MS.gene032644.t1 MTR_1g050590 44.538 119 63 2 250 367 2 118 4.91e-26 102
MS.gene032644.t1 MTR_7g079440 26.722 363 236 12 76 427 226 569 1.53e-24 107
MS.gene032644.t1 MTR_1g062190 23.864 440 300 14 80 504 120 539 1.34e-23 104
MS.gene032644.t1 MTR_5g009110 24.018 433 276 14 114 504 1 422 1.28e-22 100
MS.gene032644.t1 MTR_2g062670 34.320 169 99 3 171 338 66 223 1.91e-22 100
MS.gene032644.t1 MTR_2g010250 27.444 266 186 6 245 504 241 505 3.52e-22 100
MS.gene032644.t1 MTR_1g101050 28.626 262 171 8 233 489 248 498 3.66e-22 100
MS.gene032644.t1 MTR_1g101040 28.788 264 170 7 233 493 252 500 5.13e-22 99.8
MS.gene032644.t1 MTR_6g072490 29.600 250 160 7 245 489 262 500 1.23e-21 98.6
MS.gene032644.t1 MTR_2g010380 28.000 250 172 6 262 504 261 509 2.61e-21 97.4
MS.gene032644.t1 MTR_7g006900 28.514 249 155 9 258 501 237 467 3.49e-21 96.7
MS.gene032644.t1 MTR_6g017325 28.696 230 148 7 258 484 273 489 6.25e-21 96.3
MS.gene032644.t1 MTR_2g010330 24.433 397 265 11 125 504 129 507 9.87e-21 95.5
MS.gene032644.t1 MTR_2g010290 28.244 262 167 9 259 504 276 532 2.11e-20 94.7
MS.gene032644.t1 MTR_2g061200 22.410 415 274 12 114 503 137 528 5.37e-20 93.6
MS.gene032644.t1 MTR_4g094775 23.270 477 332 15 1 470 4 453 8.04e-20 92.8
MS.gene032644.t1 MTR_4g095050 25.926 297 201 8 172 465 173 453 9.22e-20 92.8
MS.gene032644.t1 MTR_5g009110 26.807 332 219 9 76 393 111 432 1.07e-19 92.0
MS.gene032644.t1 MTR_8g098565 27.437 277 167 9 259 504 233 506 1.13e-19 92.4
MS.gene032644.t1 MTR_6g008500 21.937 506 318 16 1 459 10 485 1.23e-19 92.4
MS.gene032644.t1 MTR_5g070920 25.210 238 167 5 234 464 225 458 1.60e-19 92.0
MS.gene032644.t1 MTR_2g010320 28.063 253 168 6 261 504 256 503 1.67e-19 91.7
MS.gene032644.t1 MTR_4g113650 22.791 430 295 11 75 493 101 504 2.80e-19 91.3
MS.gene032644.t1 MTR_6g084900 25.100 251 163 6 243 483 1 236 3.70e-19 87.8
MS.gene032644.t1 MTR_0171s0030 26.459 257 175 8 228 477 139 388 3.81e-19 90.1
MS.gene032644.t1 MTR_5g034900 29.500 200 137 3 308 504 319 517 4.06e-19 90.5
MS.gene032644.t1 MTR_0025s0110 22.222 459 304 13 53 493 88 511 4.95e-19 90.5
MS.gene032644.t1 MTR_8g046580 39.216 102 59 2 379 479 193 292 8.51e-19 87.4
MS.gene032644.t1 MTR_8g046580 26.020 196 123 6 38 232 16 190 1.77e-11 65.5
MS.gene032644.t1 MTR_4g089055 23.753 421 290 12 45 454 60 460 1.01e-18 89.4
MS.gene032644.t1 MTR_4g088195 26.148 283 188 9 218 486 208 483 1.55e-18 89.0
MS.gene032644.t1 MTR_0147s0030 23.829 491 269 21 54 493 92 528 3.12e-18 88.2
MS.gene032644.t1 MTR_6g008530 27.826 230 151 6 238 459 257 479 3.30e-18 87.8
MS.gene032644.t1 MTR_1g015860 29.020 255 160 10 258 504 287 528 3.68e-18 87.8
MS.gene032644.t1 MTR_7g012860 27.200 250 162 8 238 480 235 471 4.00e-18 87.4
MS.gene032644.t1 MTR_0287s0060 27.200 250 162 8 238 480 235 471 4.00e-18 87.4
MS.gene032644.t1 MTR_4g088160 24.066 482 277 19 45 483 40 475 6.84e-18 87.0
MS.gene032644.t1 MTR_8g042060 27.372 274 166 12 248 503 229 487 7.72e-18 86.7
MS.gene032644.t1 MTR_8g042060 27.372 274 166 12 248 503 265 523 7.80e-18 86.7
MS.gene032644.t1 MTR_2g010280 29.703 202 136 4 308 504 303 503 7.84e-18 86.7
MS.gene032644.t1 MTR_2g061750 29.255 188 110 5 79 248 12 194 7.86e-18 82.4
MS.gene032644.t1 MTR_0181s0030 22.200 491 355 15 4 482 1 476 8.79e-18 86.7
MS.gene032644.t1 MTR_2g061740 29.255 188 110 5 79 248 12 194 9.43e-18 82.0
MS.gene032644.t1 MTR_1g036140 44.565 92 49 1 253 344 69 158 1.05e-17 81.3
MS.gene032644.t1 MTR_7g012330 27.523 218 139 7 269 480 266 470 1.09e-17 86.3
MS.gene032644.t1 MTR_3g025260 25.610 246 164 8 233 468 231 467 1.38e-17 85.9
MS.gene032644.t1 MTR_2g055430 22.059 476 313 18 51 506 81 518 1.48e-17 85.9
MS.gene032644.t1 MTR_2g072400 22.851 477 305 19 51 503 78 515 2.55e-17 85.1
MS.gene032644.t1 MTR_8g008530 28.037 214 139 4 295 503 315 518 3.01e-17 84.7
MS.gene032644.t1 MTR_4g018800 23.028 469 316 18 28 473 43 489 3.24e-17 84.7
MS.gene032644.t1 MTR_0171s0020 22.895 380 275 11 98 470 101 469 3.41e-17 84.7
MS.gene032644.t1 MTR_8g104030 24.031 258 173 7 238 483 8 254 4.99e-17 82.0
MS.gene032644.t1 MTR_5g470730 24.878 205 143 4 234 430 225 426 5.97e-17 83.6
MS.gene032644.t1 MTR_3g104560 26.667 240 169 7 267 504 167 401 7.00e-17 83.2
MS.gene032644.t1 MTR_3g093530 26.068 234 157 6 276 503 300 523 7.12e-17 83.6
MS.gene032644.t1 MTR_3g104560 26.667 240 169 7 267 504 302 536 9.14e-17 83.6
MS.gene032644.t1 MTR_8g042000 19.463 447 298 14 75 496 107 516 1.15e-16 83.2
MS.gene032644.t1 MTR_4g088170 25.606 289 182 10 218 485 208 484 1.17e-16 83.2
MS.gene032644.t1 MTR_6g008600 25.514 243 167 6 238 473 256 491 1.27e-16 83.2
MS.gene032644.t1 MTR_5g070830 23.643 258 180 6 234 483 335 583 1.27e-16 83.2
MS.gene032644.t1 MTR_6g008620 26.786 224 156 6 233 452 249 468 1.81e-16 82.4
MS.gene032644.t1 MTR_8g104100 24.348 230 150 7 254 470 4 222 1.84e-16 79.7
MS.gene032644.t1 MTR_4g062510 24.024 333 222 9 185 493 175 500 2.13e-16 82.4
MS.gene032644.t1 MTR_5g016410 25.589 297 201 9 172 465 170 449 2.16e-16 82.0
MS.gene032644.t1 MTR_5g070710 23.950 238 169 5 234 464 224 456 2.20e-16 82.0
MS.gene032644.t1 MTR_4g048580 22.336 488 327 19 3 470 6 461 2.32e-16 82.0
MS.gene032644.t1 MTR_6g008650 21.818 495 345 16 7 473 9 489 3.86e-16 81.6
MS.gene032644.t1 MTR_1g023730 24.464 233 165 5 250 480 259 482 3.95e-16 81.3
MS.gene032644.t1 MTR_4g077210 26.872 227 155 6 233 458 235 451 4.26e-16 81.3
MS.gene032644.t1 MTR_5g009110 26.531 294 192 9 114 393 1 284 4.73e-16 79.3
MS.gene032644.t1 MTR_7g103450 25.610 246 173 5 229 473 245 481 4.79e-16 81.3
MS.gene032644.t1 MTR_6g084770 23.438 256 171 6 238 480 233 476 4.94e-16 81.3
MS.gene032644.t1 MTR_8g063280 25.000 256 178 7 258 504 248 498 4.98e-16 80.9
MS.gene032644.t1 MTR_2g055470 22.004 459 304 18 51 489 81 505 6.00e-16 80.9
MS.gene032644.t1 MTR_1g069200 24.370 238 173 4 245 482 260 490 6.30e-16 80.9
MS.gene032644.t1 MTR_4g109470 23.529 391 254 15 114 483 111 477 7.03e-16 80.5
MS.gene032644.t1 MTR_5g094660 22.173 451 316 17 45 480 40 470 7.09e-16 80.5
MS.gene032644.t1 MTR_4g071710 25.191 262 169 7 241 483 234 487 7.12e-16 80.5
MS.gene032644.t1 MTR_5g070690 24.370 238 168 5 234 463 223 456 7.15e-16 80.5
MS.gene032644.t1 MTR_5g070800 24.370 238 168 5 234 463 223 456 7.15e-16 80.5
MS.gene032644.t1 MTR_7g075610 23.762 505 320 20 9 483 8 477 8.32e-16 80.5
MS.gene032644.t1 MTR_6g008430 25.197 254 173 9 233 480 245 487 8.49e-16 80.5
MS.gene032644.t1 MTR_7g092600 21.189 387 241 9 123 470 112 473 1.98e-15 79.3
MS.gene032644.t1 MTR_1g091003 26.829 205 136 6 271 473 267 459 2.01e-15 79.0
MS.gene032644.t1 MTR_2g062680 30.612 147 70 3 288 430 19 137 2.21e-15 75.1
MS.gene032644.t1 MTR_6g008640 23.810 315 219 10 170 473 183 487 2.32e-15 79.0
MS.gene032644.t1 MTR_3g014880 25.506 247 174 7 233 473 248 490 2.47e-15 79.0
MS.gene032644.t1 MTR_8g042020 23.188 276 197 7 235 503 255 522 2.73e-15 79.0
MS.gene032644.t1 MTR_5g070700 24.793 242 164 7 234 464 225 459 2.84e-15 78.6
MS.gene032644.t1 MTR_2g010300 27.723 202 126 5 308 504 303 489 3.00e-15 78.6
MS.gene032644.t1 MTR_1g103670 25.112 223 149 7 239 458 239 446 3.08e-15 78.6
MS.gene032644.t1 MTR_8g042040 26.515 264 164 10 248 503 265 506 3.51e-15 78.6
MS.gene032644.t1 MTR_0171s0010 23.873 377 241 15 116 470 119 471 3.52e-15 78.6
MS.gene032644.t1 MTR_4g089020 22.931 423 291 14 45 454 38 438 3.96e-15 78.2
MS.gene032644.t1 MTR_3g025230 24.771 327 212 12 171 480 168 477 4.33e-15 78.2
MS.gene032644.t1 MTR_6g042610 22.353 510 319 20 8 475 11 485 5.01e-15 78.2
MS.gene032644.t1 MTR_2g073480 28.780 205 130 7 260 459 170 363 5.70e-15 77.0
MS.gene032644.t1 MTR_4g088400 27.092 251 171 6 233 480 250 491 5.94e-15 77.8
MS.gene032644.t1 MTR_2g073440 28.922 204 129 7 260 458 237 429 6.57e-15 77.4
MS.gene032644.t1 MTR_1g085680 20.915 459 287 16 75 501 99 513 8.60e-15 77.4
MS.gene032644.t1 MTR_2g437840 24.742 291 199 7 172 459 170 443 9.45e-15 77.0
MS.gene032644.t1 MTR_5g007450 26.291 213 146 5 271 483 270 471 9.97e-15 77.0
MS.gene032644.t1 MTR_5g091760 25.338 296 187 10 181 473 183 447 1.35e-14 76.6
MS.gene032644.t1 MTR_7g028020 24.260 507 292 26 9 470 4 463 1.66e-14 76.3
MS.gene032644.t1 MTR_5g094550 23.735 257 177 8 230 480 228 471 1.98e-14 75.9
MS.gene032644.t1 MTR_7g055793 28.837 215 129 7 292 493 263 466 2.37e-14 75.5
MS.gene032644.t1 MTR_5g007460 26.364 220 150 5 254 470 227 437 3.08e-14 75.5
MS.gene032644.t1 MTR_7g055793 28.837 215 129 7 292 493 318 521 3.29e-14 75.5
MS.gene032644.t1 MTR_5g070850 24.372 398 250 16 95 465 87 460 3.71e-14 75.1
MS.gene032644.t1 MTR_7g079440 25.725 276 177 10 76 338 226 486 4.08e-14 75.1
MS.gene032644.t1 MTR_8g027040 26.316 228 149 8 251 473 298 511 4.49e-14 75.1
MS.gene032644.t1 MTR_4g104610 28.571 161 110 3 294 454 291 446 5.00e-14 74.7
MS.gene032644.t1 MTR_3g436390 25.641 234 162 6 234 463 231 456 5.35e-14 74.7
MS.gene032644.t1 MTR_3g024520 24.159 327 214 12 171 480 168 477 6.54e-14 74.3
MS.gene032644.t1 MTR_7g098550 24.034 466 276 18 51 485 70 488 8.96e-14 73.9
MS.gene032644.t1 MTR_7g098550 24.348 460 274 18 51 485 70 480 9.59e-14 73.9
MS.gene032644.t1 MTR_1g031700 19.596 495 343 19 9 483 12 471 1.03e-13 73.9
MS.gene032644.t1 MTR_1g091023 25.490 204 138 6 272 473 268 459 1.17e-13 73.6
MS.gene032644.t1 MTR_1g091010 27.513 189 123 6 272 458 267 443 1.20e-13 73.6
MS.gene032644.t1 MTR_7g027960 26.296 270 173 11 218 470 203 463 1.34e-13 73.6
MS.gene032644.t1 MTR_8g012585 21.846 325 236 10 166 480 107 423 1.58e-13 73.2
MS.gene032644.t1 MTR_8g076290 23.932 234 160 8 233 454 223 450 1.59e-13 73.2
MS.gene032644.t1 MTR_4g078110 24.887 221 158 5 261 480 235 448 2.05e-13 72.8
MS.gene032644.t1 MTR_8g035790 34.694 98 62 2 408 504 1 97 2.32e-13 66.6
MS.gene032644.t1 MTR_4g104540 28.571 161 110 3 294 454 221 376 2.75e-13 72.0
MS.gene032644.t1 MTR_1g037370 28.495 186 122 6 276 459 268 444 2.90e-13 72.4
MS.gene032644.t1 MTR_4g104570 30.000 150 100 3 305 454 1 145 3.28e-13 68.9
MS.gene032644.t1 MTR_4g088420 27.586 203 140 5 305 504 31 229 4.99e-13 69.3
MS.gene032644.t1 MTR_4g026200 23.868 243 175 6 240 482 237 469 5.74e-13 71.6
MS.gene032644.t1 MTR_5g007550 25.123 203 141 5 271 473 270 461 5.88e-13 71.2
MS.gene032644.t1 MTR_1g031710 26.733 202 129 8 258 458 67 250 8.32e-13 69.7
MS.gene032644.t1 MTR_4g089030 23.323 313 212 11 155 454 165 462 1.03e-12 70.9
MS.gene032644.t1 MTR_2g031920 25.419 358 232 16 153 504 159 487 1.33e-12 70.1
MS.gene032644.t1 MTR_8g469360 26.639 244 158 7 265 493 184 421 1.66e-12 69.7
MS.gene032644.t1 MTR_4g133750 23.457 243 169 6 248 483 245 477 2.13e-12 69.7
MS.gene032644.t1 MTR_4g088425 26.295 251 174 6 233 480 233 475 2.22e-12 69.7
MS.gene032644.t1 MTR_4g025980 28.251 223 150 5 263 482 254 469 2.27e-12 69.7
MS.gene032644.t1 MTR_4g026030 24.254 268 186 9 219 482 63 317 4.21e-12 67.8
MS.gene032644.t1 MTR_8g080520 22.543 346 244 11 167 505 198 526 4.50e-12 68.6
MS.gene032644.t1 MTR_8g469300 24.194 248 178 7 238 481 237 478 5.61e-12 68.6
MS.gene032644.t1 MTR_4g088405 29.947 187 126 3 295 480 223 405 6.66e-12 67.8
MS.gene032644.t1 MTR_1750s0010 27.815 151 104 3 304 454 1 146 8.64e-12 63.5
MS.gene032644.t1 MTR_5g018980 25.000 244 162 7 238 470 233 466 1.36e-11 67.0
MS.gene032644.t1 MTR_1g035140 20.594 505 331 19 6 480 7 471 1.52e-11 67.0
MS.gene032644.t1 MTR_0608s0010 20.494 405 259 15 9 395 12 371 1.79e-11 66.2
MS.gene032644.t1 MTR_8g020960 22.851 477 333 15 11 473 15 470 1.94e-11 66.6
MS.gene032644.t1 MTR_7g075540 21.978 455 294 15 57 480 47 471 1.99e-11 66.6
MS.gene032644.t1 MTR_3g057970 24.797 246 162 8 233 470 222 452 2.09e-11 66.6
MS.gene032644.t1 MTR_1g442730 21.010 495 336 17 10 480 8 471 2.66e-11 66.2
MS.gene032644.t1 MTR_5g095290 19.960 496 341 17 8 480 9 471 2.70e-11 66.2
MS.gene032644.t1 MTR_3g058110 23.922 255 182 7 233 480 227 476 3.03e-11 66.2
MS.gene032644.t1 MTR_1g097220 23.237 241 168 8 271 504 298 528 4.26e-11 65.5
MS.gene032644.t1 MTR_3g057900 22.538 528 336 22 4 504 6 487 5.10e-11 65.5
MS.gene032644.t1 MTR_3g057980 23.404 235 155 7 238 463 232 450 5.22e-11 65.5
MS.gene032644.t1 MTR_3g058000 22.179 257 184 6 233 480 227 476 6.30e-11 65.1
MS.gene032644.t1 MTR_6g035115 28.070 171 108 5 298 464 291 450 6.40e-11 65.1
MS.gene032644.t1 MTR_4g026080 25.989 177 124 4 305 480 1 171 6.68e-11 62.4
MS.gene032644.t1 MTR_7g075390 24.066 482 295 19 31 483 39 478 7.20e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032644.t1 AT2G23180 44.574 516 272 6 1 505 1 513 2.30e-155 452
MS.gene032644.t1 AT4G39490 44.914 521 265 6 1 504 1 516 1.87e-151 443
MS.gene032644.t1 AT4G39480 44.186 516 273 6 1 504 1 513 2.48e-148 435
MS.gene032644.t1 AT4G32170 42.323 508 284 5 1 504 1 503 8.85e-148 433
MS.gene032644.t1 AT1G47620 42.436 509 285 4 2 504 9 515 1.99e-146 430
MS.gene032644.t1 AT4G39500 42.495 513 277 8 2 504 12 516 3.25e-146 429
MS.gene032644.t1 AT4G39500 44.492 472 247 6 42 504 1 466 6.61e-144 422
MS.gene032644.t1 AT2G21910 43.487 476 259 5 36 504 34 506 6.68e-142 418
MS.gene032644.t1 AT4G39510 42.970 505 269 7 8 504 12 505 5.08e-141 416
MS.gene032644.t1 AT1G57750 40.668 509 284 6 1 504 1 496 3.01e-136 403
MS.gene032644.t1 AT5G52320 40.336 476 272 4 33 503 33 501 7.47e-136 402
MS.gene032644.t1 AT1G65340 39.959 483 277 4 27 503 27 502 2.76e-134 398
MS.gene032644.t1 AT5G52320 40.127 471 270 4 33 498 33 496 1.99e-133 396
MS.gene032644.t1 AT5G02900 39.922 516 261 9 1 504 1 479 2.90e-123 369
MS.gene032644.t1 AT5G23190 36.204 511 304 9 9 506 41 542 6.06e-114 348
MS.gene032644.t1 AT1G63710 35.590 517 312 8 3 506 1 509 9.48e-109 333
MS.gene032644.t1 AT1G57750 39.130 437 248 6 1 432 1 424 4.67e-107 326
MS.gene032644.t1 AT1G01600 36.653 502 293 10 22 506 22 515 3.90e-106 328
MS.gene032644.t1 AT1G24540 36.667 480 289 6 37 505 46 521 4.14e-106 327
MS.gene032644.t1 AT5G08250 34.578 509 305 10 14 506 46 542 1.67e-105 326
MS.gene032644.t1 AT4G00360 36.416 519 306 11 4 506 3 513 2.85e-105 325
MS.gene032644.t1 AT5G08250 35.391 486 289 9 37 506 4 480 1.18e-104 322
MS.gene032644.t1 AT2G45970 35.659 516 301 11 8 506 11 512 1.36e-104 323
MS.gene032644.t1 AT3G26125 35.451 488 295 5 37 506 49 534 1.02e-102 318
MS.gene032644.t1 AT5G58860 35.616 511 296 10 8 504 17 508 1.12e-98 307
MS.gene032644.t1 AT1G13140 34.893 513 318 6 4 506 20 526 4.82e-98 306
MS.gene032644.t1 AT1G13150 35.417 480 298 5 37 506 42 519 1.25e-96 302
MS.gene032644.t1 AT1G13140 34.127 504 295 8 10 506 27 500 2.41e-94 296
MS.gene032644.t1 AT3G56630 34.454 476 293 11 37 504 34 498 6.00e-88 279
MS.gene032644.t1 AT1G34540 34.034 476 294 10 37 504 34 497 1.43e-87 278
MS.gene032644.t1 AT3G48520 31.933 476 303 6 37 505 39 500 1.44e-86 275
MS.gene032644.t1 AT5G63450 33.194 479 298 7 35 505 39 503 1.02e-85 273
MS.gene032644.t1 AT5G63450 33.194 479 298 7 35 505 97 561 1.01e-84 273
MS.gene032644.t1 AT2G27690 32.096 458 290 7 53 504 52 494 5.40e-84 268
MS.gene032644.t1 AT2G45510 31.138 501 313 13 9 496 18 499 3.47e-80 259
MS.gene032644.t1 AT2G44890 31.445 512 316 15 1 496 7 499 7.33e-77 250
MS.gene032644.t1 AT1G69500 30.916 524 303 12 23 504 17 523 1.15e-76 250
MS.gene032644.t1 AT3G01900 30.390 487 307 10 29 505 27 491 1.49e-74 244
MS.gene032644.t1 AT2G44890 30.333 511 305 15 1 496 7 481 5.04e-71 234
MS.gene032644.t1 AT3G53130 25.000 440 295 14 80 504 120 539 6.22e-29 120
MS.gene032644.t1 AT1G31800 23.928 443 303 13 76 504 147 569 3.95e-28 118
MS.gene032644.t1 AT5G52400 31.674 221 140 5 262 481 286 496 3.48e-23 103
MS.gene032644.t1 AT2G26710 24.724 453 299 17 50 493 81 500 8.55e-23 102
MS.gene032644.t1 AT5G51900 39.098 133 72 2 219 342 1 133 5.86e-22 95.5
MS.gene032644.t1 AT1G66030 32.948 173 94 5 4 164 1 163 3.37e-21 90.9
MS.gene032644.t1 AT3G61040 30.837 227 145 7 258 483 255 470 5.78e-21 96.3
MS.gene032644.t1 AT4G13290 25.055 451 285 19 45 473 35 454 7.49e-21 95.9
MS.gene032644.t1 AT4G15110 23.319 476 303 19 76 504 118 578 1.52e-20 95.5
MS.gene032644.t1 AT3G14680 23.778 450 287 21 51 482 79 490 3.66e-20 94.0
MS.gene032644.t1 AT3G14650 22.857 455 285 20 51 482 79 490 1.33e-19 92.0
MS.gene032644.t1 AT4G37340 25.952 289 193 10 172 458 171 440 1.51e-19 92.0
MS.gene032644.t1 AT5G24900 27.237 257 170 8 251 501 162 407 1.69e-19 91.3
MS.gene032644.t1 AT5G24900 25.882 255 176 6 251 501 279 524 1.89e-19 91.7
MS.gene032644.t1 AT4G13310 24.330 448 300 18 45 473 34 461 1.91e-19 91.7
MS.gene032644.t1 AT3G48300 22.296 453 303 19 44 479 36 456 3.68e-19 90.5
MS.gene032644.t1 AT3G48270 23.721 430 271 18 44 452 38 431 3.68e-19 90.9
MS.gene032644.t1 AT3G48300 22.296 453 303 19 44 479 38 458 3.72e-19 90.5
MS.gene032644.t1 AT3G14660 21.778 450 296 19 51 482 79 490 6.01e-19 90.1
MS.gene032644.t1 AT3G14640 24.348 460 274 24 51 482 79 492 9.31e-19 89.7
MS.gene032644.t1 AT5G06905 25.926 513 283 27 4 465 1 467 1.07e-18 89.4
MS.gene032644.t1 AT4G37370 25.836 329 202 10 149 465 148 446 1.17e-18 89.4
MS.gene032644.t1 AT3G14640 24.348 460 274 24 51 482 101 514 1.18e-18 89.4
MS.gene032644.t1 AT5G57260 26.074 326 208 12 144 452 134 443 2.00e-18 88.6
MS.gene032644.t1 AT1G13080 23.140 363 246 10 127 480 16 354 2.25e-18 87.4
MS.gene032644.t1 AT1G13080 23.256 387 254 11 113 480 110 472 8.16e-18 86.7
MS.gene032644.t1 AT5G07990 24.803 254 182 6 234 483 228 476 1.37e-17 85.9
MS.gene032644.t1 AT2G27000 25.000 376 241 14 123 481 129 480 1.60e-17 85.9
MS.gene032644.t1 AT2G24180 27.542 236 159 5 238 470 238 464 2.13e-17 85.5
MS.gene032644.t1 AT1G64940 27.638 199 139 3 308 504 313 508 2.25e-17 85.5
MS.gene032644.t1 AT2G30770 24.249 466 311 17 45 489 35 479 2.85e-17 85.1
MS.gene032644.t1 AT3G20940 22.101 457 309 14 25 462 37 465 3.81e-17 84.7
MS.gene032644.t1 AT5G38450 30.144 209 130 6 296 501 316 511 4.53e-17 84.3
MS.gene032644.t1 AT2G45580 20.244 410 283 17 91 483 100 482 9.65e-17 83.2
MS.gene032644.t1 AT5G24910 22.749 422 258 19 114 504 148 532 1.46e-16 82.8
MS.gene032644.t1 AT3G20950 22.177 487 339 17 5 472 12 477 1.50e-16 82.8
MS.gene032644.t1 AT3G03470 25.869 259 180 6 255 504 254 509 1.64e-16 82.8
MS.gene032644.t1 AT2G46660 25.177 282 187 9 234 504 260 528 1.81e-16 82.4
MS.gene032644.t1 AT3G14660 26.210 248 157 10 245 482 113 344 2.09e-16 81.3
MS.gene032644.t1 AT3G20140 24.425 348 245 9 126 470 135 467 2.65e-16 82.0
MS.gene032644.t1 AT2G23190 25.490 306 205 9 156 458 199 484 4.55e-16 81.3
MS.gene032644.t1 AT4G13770 26.606 218 148 4 270 483 264 473 4.73e-16 81.3
MS.gene032644.t1 AT2G45580 23.868 243 170 8 245 483 97 328 5.08e-16 80.1
MS.gene032644.t1 AT1G64950 24.800 250 179 5 257 504 265 507 6.92e-16 80.9
MS.gene032644.t1 AT1G66540 27.397 219 143 6 240 458 66 268 8.57e-16 79.0
MS.gene032644.t1 AT1G50520 23.442 337 223 14 146 469 157 471 9.34e-16 80.5
MS.gene032644.t1 AT4G15350 23.743 358 240 14 126 470 128 465 9.50e-16 80.1
MS.gene032644.t1 AT1G66540 27.397 219 143 6 240 458 125 327 1.34e-15 79.0
MS.gene032644.t1 AT2G27010 25.862 232 159 7 243 470 225 447 1.49e-15 79.7
MS.gene032644.t1 AT2G23220 27.434 226 147 5 240 465 254 462 3.20e-15 78.6
MS.gene032644.t1 AT3G14610 27.490 251 151 11 245 482 258 490 3.20e-15 78.6
MS.gene032644.t1 AT3G28740 27.586 232 148 7 240 471 247 458 3.93e-15 78.2
MS.gene032644.t1 AT4G37330 27.397 219 142 6 240 458 236 437 4.35e-15 78.2
MS.gene032644.t1 AT5G47990 23.343 347 236 12 146 481 155 482 4.68e-15 78.2
MS.gene032644.t1 AT1G13110 21.053 361 273 9 114 470 112 464 6.60e-15 77.8
MS.gene032644.t1 AT4G27710 21.111 450 315 14 51 484 74 499 7.09e-15 77.4
MS.gene032644.t1 AT3G26830 24.786 234 168 6 238 470 232 458 7.71e-15 77.4
MS.gene032644.t1 AT4G37400 22.414 348 251 7 149 494 147 477 7.75e-15 77.4
MS.gene032644.t1 AT5G24950 24.762 210 143 5 269 473 261 460 8.35e-15 77.4
MS.gene032644.t1 AT5G35715 23.913 368 253 13 114 470 46 397 9.11e-15 77.0
MS.gene032644.t1 AT3G48280 25.000 308 198 14 155 452 147 431 1.15e-14 76.6
MS.gene032644.t1 AT2G26170 26.210 248 173 8 263 504 195 438 1.47e-14 76.3
MS.gene032644.t1 AT2G26170 26.210 248 173 8 263 504 278 521 1.63e-14 76.3
MS.gene032644.t1 AT3G26270 25.316 237 164 5 238 470 236 463 1.69e-14 76.3
MS.gene032644.t1 AT4G31950 23.904 251 181 6 234 478 231 477 2.31e-14 75.9
MS.gene032644.t1 AT4G15360 23.848 369 247 15 115 470 121 468 2.39e-14 75.9
MS.gene032644.t1 AT1G11610 23.179 453 311 16 45 480 35 467 2.45e-14 75.9
MS.gene032644.t1 AT3G48310 20.444 450 303 17 44 473 39 453 2.76e-14 75.5
MS.gene032644.t1 AT1G11610 23.179 453 311 16 45 480 35 467 3.22e-14 75.5
MS.gene032644.t1 AT2G25160 26.457 223 143 7 240 452 247 458 3.29e-14 75.5
MS.gene032644.t1 AT1G01190 26.126 222 149 6 275 491 310 521 3.44e-14 75.5
MS.gene032644.t1 AT1G01190 26.126 222 149 6 275 491 305 516 3.53e-14 75.5
MS.gene032644.t1 AT3G48290 21.759 432 277 18 44 452 40 433 4.76e-14 74.7
MS.gene032644.t1 AT4G12310 24.906 265 189 5 238 497 246 505 7.04e-14 74.3
MS.gene032644.t1 AT2G12190 24.696 247 175 6 257 499 265 504 9.25e-14 73.9
MS.gene032644.t1 AT4G31940 23.171 246 180 5 238 478 248 489 1.36e-13 73.6
MS.gene032644.t1 AT4G12300 23.043 230 171 3 267 494 271 496 1.83e-13 73.2
MS.gene032644.t1 AT4G39950 24.686 239 170 6 238 473 307 538 1.92e-13 73.2
MS.gene032644.t1 AT4G37410 23.304 339 222 10 141 471 143 451 2.22e-13 72.8
MS.gene032644.t1 AT1G64930 25.123 203 145 4 306 504 309 508 2.35e-13 72.8
MS.gene032644.t1 AT4G39950 24.686 239 170 6 238 473 267 498 2.44e-13 72.8
MS.gene032644.t1 AT5G57220 22.156 334 238 7 169 500 164 477 2.70e-13 72.4
MS.gene032644.t1 AT5G04330 21.739 253 186 6 238 483 231 478 2.86e-13 72.4
MS.gene032644.t1 AT3G61880 23.695 249 168 8 234 473 260 495 3.64e-13 72.4
MS.gene032644.t1 AT4G12320 24.528 265 190 5 238 497 244 503 4.20e-13 72.0
MS.gene032644.t1 AT5G06900 21.654 254 189 5 224 477 222 465 4.44e-13 72.0
MS.gene032644.t1 AT4G31500 21.862 247 187 3 238 483 231 472 5.48e-13 71.6
MS.gene032644.t1 AT3G61880 23.695 249 168 8 234 473 260 495 7.72e-13 71.2
MS.gene032644.t1 AT4G20240 24.716 352 234 14 83 426 85 413 1.15e-12 70.5
MS.gene032644.t1 AT3G20110 20.930 473 326 18 6 460 10 452 1.31e-12 70.5
MS.gene032644.t1 AT4G31970 23.171 246 180 5 238 478 247 488 1.58e-12 70.1
MS.gene032644.t1 AT1G13090 21.096 365 266 13 114 470 108 458 1.67e-12 70.1
MS.gene032644.t1 AT2G46960 21.749 423 271 17 75 473 99 485 1.98e-12 69.7
MS.gene032644.t1 AT5G04630 22.022 277 197 6 239 504 240 508 3.21e-12 69.3
MS.gene032644.t1 AT1G67110 26.020 196 135 4 296 489 310 497 4.24e-12 68.9
MS.gene032644.t1 AT2G46960 26.829 205 132 8 276 473 176 369 4.30e-12 68.6
MS.gene032644.t1 AT3G26180 23.636 220 154 6 266 480 128 338 5.08e-12 67.8
MS.gene032644.t1 AT3G26180 23.636 220 154 6 266 480 262 472 5.23e-12 68.6
MS.gene032644.t1 AT5G42590 23.045 243 180 4 238 480 232 467 6.27e-12 68.2
MS.gene032644.t1 AT2G30750 25.463 216 148 5 262 473 254 460 6.39e-12 68.2
MS.gene032644.t1 AT2G46950 22.654 437 293 16 50 473 135 539 7.42e-12 68.2
MS.gene032644.t1 AT3G26150 21.212 231 170 4 254 480 250 472 8.71e-12 67.8
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 247 463 1.58e-11 67.0
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 247 463 1.58e-11 67.0
MS.gene032644.t1 AT3G20090 25.000 228 151 7 241 460 248 463 1.67e-11 67.0
MS.gene032644.t1 AT3G20090 24.561 228 152 7 241 460 110 325 1.69e-11 66.2
MS.gene032644.t1 AT4G37360 24.127 315 216 10 147 458 146 440 1.98e-11 66.6
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 110 326 2.10e-11 66.2
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 110 326 2.10e-11 66.2
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 110 326 2.10e-11 66.2
MS.gene032644.t1 AT3G20080 24.779 226 155 6 241 460 110 326 2.10e-11 66.2
MS.gene032644.t1 AT5G09970 24.747 198 139 6 267 462 302 491 2.21e-11 66.6
MS.gene032644.t1 AT3G44250 22.788 373 248 12 111 470 113 458 3.21e-11 65.9
MS.gene032644.t1 AT5G36220 24.658 219 148 5 240 458 99 300 3.63e-11 65.1
MS.gene032644.t1 AT5G36220 24.658 219 148 5 240 458 245 446 3.81e-11 65.9
MS.gene032644.t1 AT3G26200 23.032 343 236 12 146 480 147 469 3.87e-11 65.9
MS.gene032644.t1 AT3G26170 22.273 220 157 6 266 480 262 472 4.13e-11 65.9
MS.gene032644.t1 AT3G26310 26.667 195 122 6 266 452 258 439 4.86e-11 65.5
MS.gene032644.t1 AT2G02580 24.556 338 225 12 156 482 152 470 6.49e-11 65.1
MS.gene032644.t1 AT1G13100 19.747 395 299 11 114 503 105 486 8.96e-11 64.7
MS.gene032644.t1 AT1G28430 27.149 221 143 8 257 470 260 469 9.58e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGATTAAAGAAAATTT+TGG 0.148197 6.3:-776790 MS.gene032644:CDS
GAGAGAAAGCAAGCAATTAA+AGG 0.248200 6.3:-776661 MS.gene032644:CDS
ATTAATATTGAAAAGAAGTT+AGG 0.249511 6.3:-776763 MS.gene032644:CDS
ATAAAGTGCCTAAAAGTATT+TGG 0.249799 6.3:-777131 MS.gene032644:CDS
GTTTACCAGCATGAACTATT+TGG 0.255278 6.3:-777571 MS.gene032644:CDS
TTGTATTAGGATTAACAATA+TGG 0.260430 6.3:+776620 None:intergenic
ATTGGATAATCTGTAAGAAT+TGG 0.281071 6.3:+777702 None:intergenic
TGCTGGACCTAGAACTTGTT+TGG 0.303612 6.3:-776458 MS.gene032644:CDS
AACGTCTCCAACGACGAATT+TGG 0.307483 6.3:+777733 None:intergenic
TGGGGAGATTTGAAGAGATA+TGG 0.308634 6.3:-776573 MS.gene032644:CDS
CATGAGATATTTGAAGCCTT+TGG 0.310048 6.3:-777474 MS.gene032644:CDS
TGCTTTCTCTCAAAGGGTAT+TGG 0.318382 6.3:+776673 None:intergenic
AGAATATGCCTTCTTCGATT+TGG 0.319635 6.3:+777160 None:intergenic
TCCTTTCCCAAACAAGTTCT+AGG 0.335209 6.3:+776451 None:intergenic
AAATCAATGGAAAGACAATT+AGG 0.345217 6.3:+777213 None:intergenic
TATTGCTACACACCCTTTAG+TGG 0.359348 6.3:-776827 MS.gene032644:CDS
GAGAAGTTTGATTCCTTTGT+TGG 0.359539 6.3:-777331 MS.gene032644:CDS
TGAAGAATGGTTTGAAGGTT+AGG 0.363580 6.3:-776318 MS.gene032644:CDS
GTGCTATATGTGAAGCTCTA+AGG 0.366133 6.3:-776705 MS.gene032644:CDS
GATATGGGGAAAAGATTGTT+TGG 0.376603 6.3:-776557 MS.gene032644:CDS
CGAGGCAAGTTCCACAATAA+TGG 0.379155 6.3:+777663 None:intergenic
GCTGGACCTAGAACTTGTTT+GGG 0.381694 6.3:-776457 MS.gene032644:CDS
TGCATATACAAATTGATCAT+AGG 0.384677 6.3:+777050 None:intergenic
GGGGAGATTTGAAGAGATAT+GGG 0.397435 6.3:-776572 MS.gene032644:CDS
TTGGATAATCTGTAAGAATT+GGG 0.409571 6.3:+777703 None:intergenic
AATATTTGTTCTGTAGTCCT+TGG 0.413111 6.3:-777243 MS.gene032644:CDS
TAGGAACACATGTGAGTTCA+TGG 0.415085 6.3:-777601 MS.gene032644:CDS
ACAATCGAATGGCTTAATAT+AGG 0.424668 6.3:+776349 None:intergenic
CAGAGACATGGAAATACAAT+AGG 0.424848 6.3:-777428 MS.gene032644:CDS
ATTGTTCTTCTCATGAAGAA+TGG 0.427552 6.3:-776331 MS.gene032644:CDS
GAATCTTAGCTTCCACTAAA+GGG 0.434801 6.3:+776815 None:intergenic
GCATTCAATCTCTTTGTAGC+GGG 0.437335 6.3:-776892 MS.gene032644:CDS
GCCTTCTCACATGCGACATC+AGG 0.439836 6.3:+777189 None:intergenic
AGAATCTTAGCTTCCACTAA+AGG 0.439883 6.3:+776814 None:intergenic
TTAATATTGAAAAGAAGTTA+GGG 0.441140 6.3:-776762 MS.gene032644:CDS
GTATTTCCATGTCTCTGAAT+CGG 0.444231 6.3:+777434 None:intergenic
TCTCATGAAGAATGGTTTGA+AGG 0.452138 6.3:-776323 MS.gene032644:CDS
CTATAACTTCAGCGCTTACA+TGG 0.457857 6.3:-776861 MS.gene032644:CDS
CTTTCAGATATCCATCTCTC+TGG 0.463966 6.3:+776526 None:intergenic
TTTCTCTCAAAGGGTATTGG+AGG 0.464054 6.3:+776676 None:intergenic
GAACATGACCATCCACTACT+TGG 0.470328 6.3:+776371 None:intergenic
ATTGCTTGCTTTCTCTCAAA+GGG 0.475212 6.3:+776667 None:intergenic
ATATTTGAAGCCTTTGGAGA+TGG 0.486237 6.3:-777468 MS.gene032644:CDS
AATTGCTTGCTTTCTCTCAA+AGG 0.492373 6.3:+776666 None:intergenic
AAGTTCATTAGTTATAATGC+TGG 0.493549 6.3:-776475 MS.gene032644:CDS
GCATGATAATACCATTATTG+TGG 0.500820 6.3:-777674 MS.gene032644:CDS
GAAAATCATTCAAAACAAGT+TGG 0.505159 6.3:-777355 MS.gene032644:CDS
CAACCACTGACCCTTGTTGT+CGG 0.506613 6.3:+777301 None:intergenic
CATGTGAGTTCATGGGACCT+TGG 0.507567 6.3:-777593 MS.gene032644:CDS
TGCGACATCAGGAAAATCAA+TGG 0.516368 6.3:+777200 None:intergenic
TAACATGTGATGCAAGTTGA+TGG 0.518161 6.3:+777536 None:intergenic
TCCTGATGTCGCATGTGAGA+AGG 0.528443 6.3:-777190 MS.gene032644:CDS
TGCAAATATTAAGTCAAAGA+GGG 0.529509 6.3:-777031 MS.gene032644:CDS
TATTGATGTGTAACTAAGCA+TGG 0.538439 6.3:+777791 None:intergenic
AGTGGAAGCTAAGATTCTTG+AGG 0.538509 6.3:-776809 MS.gene032644:CDS
TTGGATCATGTCCGACAACA+AGG 0.540828 6.3:-777312 MS.gene032644:CDS
AACTTTGATGAAAGAAGAGA+AGG 0.544814 6.3:-776959 MS.gene032644:CDS
TAACTAATGAACTTGTAAGA+TGG 0.546221 6.3:+776484 None:intergenic
ACCTAGAACTTGTTTGGGAA+AGG 0.559793 6.3:-776452 MS.gene032644:CDS
ATGCAAATATTAAGTCAAAG+AGG 0.567712 6.3:-777032 MS.gene032644:CDS
AACATGTGATGCAAGTTGAT+GGG 0.575489 6.3:+777537 None:intergenic
GTTGAATATTCCATCTCCAA+AGG 0.578090 6.3:+777458 None:intergenic
TGGAGTTCAAGCCAGAGAGA+TGG 0.583586 6.3:-776537 MS.gene032644:CDS
GAATTTGGAAGACGATGCAT+AGG 0.584585 6.3:+777748 None:intergenic
TGCATTCAATCTCTTTGTAG+CGG 0.586147 6.3:-776893 MS.gene032644:CDS
GACAATTAGGATCACATCCA+AGG 0.586200 6.3:+777226 None:intergenic
AGTTATTGAAACAACAACAT+AGG 0.587268 6.3:-777620 MS.gene032644:CDS
CAAATATTGTGTCCAAGTAG+TGG 0.596917 6.3:-776383 MS.gene032644:CDS
TCGTCTTCCAAATTCGTCGT+TGG 0.599135 6.3:-777740 MS.gene032644:CDS
GAGAGATGGATATCTGAAAG+AGG 0.600909 6.3:-776523 MS.gene032644:CDS
TCATGAGAAGAACAATCGAA+TGG 0.603388 6.3:+776338 None:intergenic
GGATTAACAATATGGCCACT+AGG 0.608204 6.3:+776628 None:intergenic
ACTTTGATGAAAGAAGAGAA+GGG 0.611137 6.3:-776958 MS.gene032644:CDS
TATTGTGTCCAAGTAGTGGA+TGG 0.615735 6.3:-776379 MS.gene032644:CDS
AGTGACCAAATAGTTCATGC+TGG 0.619583 6.3:+777566 None:intergenic
AGGAACACATGTGAGTTCAT+GGG 0.625807 6.3:-777600 MS.gene032644:CDS
CATTCAATCTCTTTGTAGCG+GGG 0.631176 6.3:-776891 MS.gene032644:CDS
TGTCCGACAACAAGGGTCAG+TGG 0.632974 6.3:-777304 MS.gene032644:CDS
AGATGGATATCTGAAAGAGG+AGG 0.633030 6.3:-776520 MS.gene032644:CDS
CTTTGATGAAAGAAGAGAAG+GGG 0.635301 6.3:-776957 MS.gene032644:CDS
TCAACACCGATTCAGAGACA+TGG 0.653719 6.3:-777440 MS.gene032644:CDS
GTTATGAAATCATGAACTCG+AGG 0.654252 6.3:+777645 None:intergenic
GGGAGATTTGAAGAGATATG+GGG 0.657198 6.3:-776571 MS.gene032644:CDS
ACATGTGATGCAAGTTGATG+GGG 0.662103 6.3:+777538 None:intergenic
TAGTTCATGCTGGTAAACCA+AGG 0.676905 6.3:+777576 None:intergenic
TGGATCATGTCCGACAACAA+GGG 0.683502 6.3:-777311 MS.gene032644:CDS
AAAGGTGATATACTTCCTAG+TGG 0.702478 6.3:-776643 MS.gene032644:CDS
TGTCGGACATGATCCAACAA+AGG 0.703258 6.3:+777318 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGTATTATTGTATT+AGG + chr6.3:777488-777507 None:intergenic 10.0%
!! ATGTAGAAAAAATAATGAAA+TGG - chr6.3:777097-777116 MS.gene032644:CDS 15.0%
!! ATTAATATTGAAAAGAAGTT+AGG - chr6.3:777329-777348 MS.gene032644:CDS 15.0%
!! TTAATATTGAAAAGAAGTTA+GGG - chr6.3:777330-777349 MS.gene032644:CDS 15.0%
!!! TAACTTCTTTTCAATATTAA+TGG + chr6.3:777330-777349 None:intergenic 15.0%
!! TTGTATTAGGATTAACAATA+TGG + chr6.3:777475-777494 None:intergenic 20.0%
!!! ACTATTTTTCTTGTATTCAA+TGG - chr6.3:777499-777518 MS.gene032644:CDS 20.0%
!!! AGGAGATTAAAGAAAATTTT+GGG - chr6.3:777303-777322 MS.gene032644:CDS 20.0%
!!! CTATTTTTCTTGTATTCAAT+GGG - chr6.3:777500-777519 MS.gene032644:CDS 20.0%
!!! TATTTTTCTTGTATTCAATG+GGG - chr6.3:777501-777520 MS.gene032644:CDS 20.0%
!!! TGTTTTGACAATTATGTTAA+GGG - chr6.3:776585-776604 MS.gene032644:CDS 20.0%
! AAATCAATGGAAAGACAATT+AGG + chr6.3:776882-776901 None:intergenic 25.0%
! AAGTTCATTAGTTATAATGC+TGG - chr6.3:777617-777636 MS.gene032644:CDS 25.0%
! AGTTATTGAAACAACAACAT+AGG - chr6.3:776472-776491 MS.gene032644:CDS 25.0%
! ATGCAAATATTAAGTCAAAG+AGG - chr6.3:777060-777079 MS.gene032644:CDS 25.0%
! ATTGGATAATCTGTAAGAAT+TGG + chr6.3:776393-776412 None:intergenic 25.0%
! GAAAATCATTCAAAACAAGT+TGG - chr6.3:776737-776756 MS.gene032644:CDS 25.0%
! TAACTAATGAACTTGTAAGA+TGG + chr6.3:777611-777630 None:intergenic 25.0%
! TGCAAATATTAAGTCAAAGA+GGG - chr6.3:777061-777080 MS.gene032644:CDS 25.0%
! TGCATATACAAATTGATCAT+AGG + chr6.3:777045-777064 None:intergenic 25.0%
! TTGGATAATCTGTAAGAATT+GGG + chr6.3:776392-776411 None:intergenic 25.0%
!! AAAAAGCTAGTTTATCTTCA+TGG - chr6.3:777365-777384 MS.gene032644:CDS 25.0%
!! CTTACAGATTATCCAATTTT+TGG - chr6.3:776396-776415 MS.gene032644:CDS 25.0%
!! GAGGAGATTAAAGAAAATTT+TGG - chr6.3:777302-777321 MS.gene032644:CDS 25.0%
!!! ATAAAGTGCCTAAAAGTATT+TGG - chr6.3:776961-776980 MS.gene032644:CDS 25.0%
!!! GTGTTTTGACAATTATGTTA+AGG - chr6.3:776584-776603 MS.gene032644:CDS 25.0%
AACTTTGATGAAAGAAGAGA+AGG - chr6.3:777133-777152 MS.gene032644:CDS 30.0%
AATATTTGTTCTGTAGTCCT+TGG - chr6.3:776849-776868 MS.gene032644:CDS 30.0%
ACAATCGAATGGCTTAATAT+AGG + chr6.3:777746-777765 None:intergenic 30.0%
ACTTTGATGAAAGAAGAGAA+GGG - chr6.3:777134-777153 MS.gene032644:CDS 30.0%
ATTGTTCTTCTCATGAAGAA+TGG - chr6.3:777761-777780 MS.gene032644:CDS 30.0%
GCATGATAATACCATTATTG+TGG - chr6.3:776418-776437 MS.gene032644:CDS 30.0%
GGTATTATCATGCCAAAAAT+TGG + chr6.3:776411-776430 None:intergenic 30.0%
GTATTTGGAAGTTGCAAAAA+TGG - chr6.3:776976-776995 MS.gene032644:CDS 30.0%
TATTGATGTGTAACTAAGCA+TGG + chr6.3:776304-776323 None:intergenic 30.0%
TGAAGAGAAAAATATGACCA+AGG - chr6.3:777010-777029 MS.gene032644:CDS 30.0%
TTGCAAAAATGGCTTCAAAT+TGG - chr6.3:776987-777006 MS.gene032644:CDS 30.0%
! GCATGATGATAAGTTTTTGA+GGG - chr6.3:777172-777191 MS.gene032644:CDS 30.0%
! TGCAACTTCCAAATACTTTT+AGG + chr6.3:776972-776991 None:intergenic 30.0%
! TGCATGATGATAAGTTTTTG+AGG - chr6.3:777171-777190 MS.gene032644:CDS 30.0%
AAAGGTGATATACTTCCTAG+TGG - chr6.3:777449-777468 MS.gene032644:CDS 35.0%
AATTGCTTGCTTTCTCTCAA+AGG + chr6.3:777429-777448 None:intergenic 35.0%
AGAATATGCCTTCTTCGATT+TGG + chr6.3:776935-776954 None:intergenic 35.0%
AGAATCTTAGCTTCCACTAA+AGG + chr6.3:777281-777300 None:intergenic 35.0%
ATTGCTTGCTTTCTCTCAAA+GGG + chr6.3:777428-777447 None:intergenic 35.0%
CAAATATTGTGTCCAAGTAG+TGG - chr6.3:777709-777728 MS.gene032644:CDS 35.0%
CAGAGACATGGAAATACAAT+AGG - chr6.3:776664-776683 MS.gene032644:CDS 35.0%
CTTTGATGAAAGAAGAGAAG+GGG - chr6.3:777135-777154 MS.gene032644:CDS 35.0%
GAATCTTAGCTTCCACTAAA+GGG + chr6.3:777280-777299 None:intergenic 35.0%
GAGAAGTTTGATTCCTTTGT+TGG - chr6.3:776761-776780 MS.gene032644:CDS 35.0%
GAGAGAAAGCAAGCAATTAA+AGG - chr6.3:777431-777450 MS.gene032644:CDS 35.0%
GATATGGGGAAAAGATTGTT+TGG - chr6.3:777535-777554 MS.gene032644:CDS 35.0%
GTATTTCCATGTCTCTGAAT+CGG + chr6.3:776661-776680 None:intergenic 35.0%
GTTATGAAATCATGAACTCG+AGG + chr6.3:776450-776469 None:intergenic 35.0%
GTTGAATATTCCATCTCCAA+AGG + chr6.3:776637-776656 None:intergenic 35.0%
GTTTACCAGCATGAACTATT+TGG - chr6.3:776521-776540 MS.gene032644:CDS 35.0%
TCATGAGAAGAACAATCGAA+TGG + chr6.3:777757-777776 None:intergenic 35.0%
TCTCATGAAGAATGGTTTGA+AGG - chr6.3:777769-777788 MS.gene032644:CDS 35.0%
TGAAGAATGGTTTGAAGGTT+AGG - chr6.3:777774-777793 MS.gene032644:CDS 35.0%
TGCATTCAATCTCTTTGTAG+CGG - chr6.3:777199-777218 MS.gene032644:CDS 35.0%
! ATATTTGAAGCCTTTGGAGA+TGG - chr6.3:776624-776643 MS.gene032644:CDS 35.0%
! CATGAGATATTTGAAGCCTT+TGG - chr6.3:776618-776637 MS.gene032644:CDS 35.0%
! GCTTTTAACCAAATCGAAGA+AGG - chr6.3:776924-776943 MS.gene032644:CDS 35.0%
! TAACATGTGATGCAAGTTGA+TGG + chr6.3:776559-776578 None:intergenic 35.0%
!! AACATGTGATGCAAGTTGAT+GGG + chr6.3:776558-776577 None:intergenic 35.0%
AGATGGATATCTGAAAGAGG+AGG - chr6.3:777572-777591 MS.gene032644:CDS 40.0%
AGGAACACATGTGAGTTCAT+GGG - chr6.3:776492-776511 MS.gene032644:CDS 40.0%
AGTGACCAAATAGTTCATGC+TGG + chr6.3:776529-776548 None:intergenic 40.0%
AGTGGAAGCTAAGATTCTTG+AGG - chr6.3:777283-777302 MS.gene032644:CDS 40.0%
CATTCAATCTCTTTGTAGCG+GGG - chr6.3:777201-777220 MS.gene032644:CDS 40.0%
CTATAACTTCAGCGCTTACA+TGG - chr6.3:777231-777250 MS.gene032644:CDS 40.0%
CTTTCAGATATCCATCTCTC+TGG + chr6.3:777569-777588 None:intergenic 40.0%
GAATTTGGAAGACGATGCAT+AGG + chr6.3:776347-776366 None:intergenic 40.0%
GACAATTAGGATCACATCCA+AGG + chr6.3:776869-776888 None:intergenic 40.0%
GAGAGATGGATATCTGAAAG+AGG - chr6.3:777569-777588 MS.gene032644:CDS 40.0%
GCATTCAATCTCTTTGTAGC+GGG - chr6.3:777200-777219 MS.gene032644:CDS 40.0%
GGATTAACAATATGGCCACT+AGG + chr6.3:777467-777486 None:intergenic 40.0%
GGGAGATTTGAAGAGATATG+GGG - chr6.3:777521-777540 MS.gene032644:CDS 40.0%
GGGGAGATTTGAAGAGATAT+GGG - chr6.3:777520-777539 MS.gene032644:CDS 40.0%
GTGCTATATGTGAAGCTCTA+AGG - chr6.3:777387-777406 MS.gene032644:CDS 40.0%
TAGGAACACATGTGAGTTCA+TGG - chr6.3:776491-776510 MS.gene032644:CDS 40.0%
TAGTTCATGCTGGTAAACCA+AGG + chr6.3:776519-776538 None:intergenic 40.0%
TATTGCTACACACCCTTTAG+TGG - chr6.3:777265-777284 MS.gene032644:CDS 40.0%
TCCTTTCCCAAACAAGTTCT+AGG + chr6.3:777644-777663 None:intergenic 40.0%
TGCGACATCAGGAAAATCAA+TGG + chr6.3:776895-776914 None:intergenic 40.0%
TGGGGAGATTTGAAGAGATA+TGG - chr6.3:777519-777538 MS.gene032644:CDS 40.0%
! ACCTAGAACTTGTTTGGGAA+AGG - chr6.3:777640-777659 MS.gene032644:CDS 40.0%
! ATCATAGGTTTTGCATGCCT+TGG + chr6.3:777030-777049 None:intergenic 40.0%
! TATTGTGTCCAAGTAGTGGA+TGG - chr6.3:777713-777732 MS.gene032644:CDS 40.0%
! TGCTTTCTCTCAAAGGGTAT+TGG + chr6.3:777422-777441 None:intergenic 40.0%
!! ACATGTGATGCAAGTTGATG+GGG + chr6.3:776557-776576 None:intergenic 40.0%
!! TTTCTCTCAAAGGGTATTGG+AGG + chr6.3:777419-777438 None:intergenic 40.0%
AACGTCTCCAACGACGAATT+TGG + chr6.3:776362-776381 None:intergenic 45.0%
CGAGGCAAGTTCCACAATAA+TGG + chr6.3:776432-776451 None:intergenic 45.0%
GAACATGACCATCCACTACT+TGG + chr6.3:777724-777743 None:intergenic 45.0%
TCGTCTTCCAAATTCGTCGT+TGG - chr6.3:776352-776371 MS.gene032644:CDS 45.0%
TGGATCATGTCCGACAACAA+GGG - chr6.3:776781-776800 MS.gene032644:CDS 45.0%
TGTCGGACATGATCCAACAA+AGG + chr6.3:776777-776796 None:intergenic 45.0%
TTGGATCATGTCCGACAACA+AGG - chr6.3:776780-776799 MS.gene032644:CDS 45.0%
! GCTGGACCTAGAACTTGTTT+GGG - chr6.3:777635-777654 MS.gene032644:CDS 45.0%
! TGCTGGACCTAGAACTTGTT+TGG - chr6.3:777634-777653 MS.gene032644:CDS 45.0%
!! TCAACACCGATTCAGAGACA+TGG - chr6.3:776652-776671 MS.gene032644:CDS 45.0%
CATGTGAGTTCATGGGACCT+TGG - chr6.3:776499-776518 MS.gene032644:CDS 50.0%
TCCTGATGTCGCATGTGAGA+AGG - chr6.3:776902-776921 MS.gene032644:CDS 50.0%
TGGAGTTCAAGCCAGAGAGA+TGG - chr6.3:777555-777574 MS.gene032644:CDS 50.0%
! CAACCACTGACCCTTGTTGT+CGG + chr6.3:776794-776813 None:intergenic 50.0%
GCCTTCTCACATGCGACATC+AGG + chr6.3:776906-776925 None:intergenic 55.0%
TGTCCGACAACAAGGGTCAG+TGG - chr6.3:776788-776807 MS.gene032644:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 776297 777817 776297 ID=MS.gene032644
chr6.3 mRNA 776297 777817 776297 ID=MS.gene032644.t1;Parent=MS.gene032644
chr6.3 exon 776297 777817 776297 ID=MS.gene032644.t1.exon1;Parent=MS.gene032644.t1
chr6.3 CDS 776297 777817 776297 ID=cds.MS.gene032644.t1;Parent=MS.gene032644.t1
Gene Sequence

>MS.gene032644

ATGGCCATGCTTAGTTACACATCAATAATTTGTGCATTCTTCTTCTTCCTATGCATCGTCTTCCAAATTCGTCGTTGGAGACGTTGCAAATACCCAATTCTTACAGATTATCCAATTTTTGGCATGATAATACCATTATTGTGGAACTTGCCTCGAGTTCATGATTTCATAACTCAGTTATTGAAACAACAACATAGGAACACATGTGAGTTCATGGGACCTTGGTTTACCAGCATGAACTATTTGGTCACTAGTGACCCCATCAACTTGCATCACATGTTAAGCAAGTGTTTTGACAATTATGTTAAGGGTCATGAATATCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACACCGATTCAGAGACATGGAAATACAATAGGTCTCTTTTTCACTCTATTCTCAAACAAAGAGATTTTGAATTCTTTCAAAAGAAAATCATTCAAAACAAGTTGGAGAGAAGTTTGATTCCTTTGTTGGATCATGTCCGACAACAAGGGTCAGTGGTTGATTTACAAGATGTCTTCAATCGTTTCACATTCGACAATATTTGTTCTGTAGTCCTTGGATGTGATCCTAATTGTCTTTCCATTGATTTTCCTGATGTCGCATGTGAGAAGGCTTTTAACCAAATCGAAGAAGGCATATTCTATAGACATAAAGTGCCTAAAAGTATTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAATATGACCAAGGCATGCAAAACCTATGATCAATTTGTATATGCAAATATTAAGTCAAAGAGGGAAGAGCTAAGCAAATGTAGAAAAAATAATGAAATGGTTGATTTGCTAACAACTTTGATGAAAGAAGAGAAGGGGTCACAAGTAGTAATGCATGATGATAAGTTTTTGAGGGATGTTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCGCTTACATGGCTCTTCTATCTTATTGCTACACACCCTTTAGTGGAAGCTAAGATTCTTGAGGAGATTAAAGAAAATTTTGGGACCATTAATATTGAAAAGAAGTTAGGGATTGATGAGTTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTCTAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTAAAGGTGATATACTTCCTAGTGGCCATATTGTTAATCCTAATACAATAATACTATTTTTCTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGAGGAGGCATTGTTCATATACCATCTTACAAGTTCATTAGTTATAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCGTTCATTCAAATTAAGATGACAACAATTGCTATTTTGAGCAAATATTGTGTCCAAGTAGTGGATGGTCATGTTCCTATATTAAGCCATTCGATTGTTCTTCTCATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA

Protein sequence

>MS.gene032644.t1

MAMLSYTSIICAFFFFLCIVFQIRRWRRCKYPILTDYPIFGMIIPLLWNLPRVHDFITQLLKQQHRNTCEFMGPWFTSMNYLVTSDPINLHHMLSKCFDNYVKGHEYHEIFEAFGDGIFNTDSETWKYNRSLFHSILKQRDFEFFQKKIIQNKLERSLIPLLDHVRQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFNQIEEGIFYRHKVPKSIWKLQKWLQIGEEKNMTKACKTYDQFVYANIKSKREELSKCRKNNEMVDLLTTLMKEEKGSQVVMHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGIDELKKLVYLHGAICEALRLFPPIPFERKQAIKGDILPSGHIVNPNTIILFFLYSMGRFEEIWGKDCLEFKPERWISERGGIVHIPSYKFISYNAGPRTCLGKDLSFIQIKMTTIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKREI