AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000494

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000494.t1 MTR_7g033570 94.960 496 25 0 1 496 1 496 0.0 978
MS.gene000494.t1 MTR_7g033580 85.081 496 74 0 1 496 1 496 0.0 890
MS.gene000494.t1 MTR_8g088470 79.381 485 99 1 12 495 8 492 0.0 814
MS.gene000494.t1 MTR_1g035670 53.320 497 220 5 10 496 10 504 0.0 562
MS.gene000494.t1 MTR_6g004670 55.668 494 210 4 9 494 13 505 0.0 553
MS.gene000494.t1 MTR_1g036130 51.406 498 228 5 12 496 12 508 0.0 544
MS.gene000494.t1 MTR_6g004630 54.049 494 219 4 10 496 13 505 0.0 543
MS.gene000494.t1 MTR_1g035790 51.881 505 233 5 1 496 1 504 0.0 541
MS.gene000494.t1 MTR_6g004590 52.789 502 218 5 13 496 17 517 0.0 537
MS.gene000494.t1 MTR_1g036200 52.590 502 229 6 3 496 1 501 0.0 537
MS.gene000494.t1 MTR_1g035750 51.081 509 234 3 1 496 1 507 0.0 537
MS.gene000494.t1 MTR_6g004600 52.277 505 222 4 10 496 14 517 0.0 536
MS.gene000494.t1 MTR_1g035760 51.724 493 207 7 12 496 12 481 0.0 533
MS.gene000494.t1 MTR_1g035800 51.758 512 229 6 1 494 1 512 0.0 526
MS.gene000494.t1 MTR_1g035830 50.598 502 231 6 10 496 10 509 0.0 526
MS.gene000494.t1 MTR_1g036010 50.398 502 232 6 10 496 10 509 0.0 525
MS.gene000494.t1 MTR_6g004610 55.076 463 200 4 38 493 1 462 0.0 520
MS.gene000494.t1 MTR_1g050362 51.690 503 223 8 9 494 7 506 0.0 518
MS.gene000494.t1 MTR_1g035580 51.195 502 218 6 10 496 9 498 0.0 517
MS.gene000494.t1 MTR_1g036270 50.195 514 237 6 1 496 1 513 2.78e-178 510
MS.gene000494.t1 MTR_1g035940 48.303 501 244 5 10 496 10 509 3.82e-174 499
MS.gene000494.t1 MTR_1g035860 46.575 438 222 5 9 436 15 450 1.26e-145 427
MS.gene000494.t1 MTR_1g069715 51.106 407 182 6 84 475 2 406 1.57e-145 432
MS.gene000494.t1 MTR_1g037560 41.684 487 269 5 23 494 57 543 4.88e-135 402
MS.gene000494.t1 MTR_1g037550 40.081 494 277 5 20 494 54 547 9.09e-135 401
MS.gene000494.t1 MTR_4g075110 39.286 504 290 6 6 494 47 549 2.31e-132 395
MS.gene000494.t1 MTR_4g012320 79.556 225 46 0 272 496 1 225 1.61e-131 380
MS.gene000494.t1 MTR_8g030590 40.000 485 265 10 33 496 33 512 3.63e-116 353
MS.gene000494.t1 MTR_5g070010 38.958 480 274 7 33 496 34 510 5.49e-115 348
MS.gene000494.t1 MTR_8g098435 39.375 480 270 9 33 496 33 507 2.94e-112 342
MS.gene000494.t1 MTR_3g463060 37.029 478 275 7 33 496 39 504 5.29e-104 320
MS.gene000494.t1 MTR_1g060550 39.599 399 223 9 77 467 93 481 3.45e-87 277
MS.gene000494.t1 MTR_4g119660 33.588 524 305 13 5 495 3 516 3.47e-86 275
MS.gene000494.t1 MTR_5g019140 33.588 524 305 12 5 495 18 531 3.70e-86 275
MS.gene000494.t1 MTR_3g080580 33.534 498 299 11 19 494 30 517 4.29e-85 272
MS.gene000494.t1 MTR_7g096340 32.489 474 295 11 33 494 42 502 1.35e-82 265
MS.gene000494.t1 MTR_7g029275 32.742 507 305 10 9 494 17 508 2.65e-82 264
MS.gene000494.t1 MTR_2g086040 34.906 424 257 8 74 491 85 495 2.94e-82 264
MS.gene000494.t1 MTR_1g070365 33.058 484 301 11 23 494 32 504 5.29e-82 263
MS.gene000494.t1 MTR_1g070345 33.128 486 292 13 27 495 36 505 6.83e-82 263
MS.gene000494.t1 MTR_7g088330 34.325 504 295 15 13 494 19 508 8.78e-82 263
MS.gene000494.t1 MTR_8g035860 34.100 478 290 13 34 495 42 510 6.56e-80 258
MS.gene000494.t1 MTR_7g096320 32.347 473 297 10 33 494 43 503 7.36e-80 258
MS.gene000494.t1 MTR_4g054920 35.172 435 254 10 79 495 93 517 1.21e-79 258
MS.gene000494.t1 MTR_8g035780 33.617 470 287 11 34 487 43 503 3.58e-78 253
MS.gene000494.t1 MTR_8g035820 34.396 439 267 11 73 495 77 510 2.22e-77 251
MS.gene000494.t1 MTR_7g406990 38.746 351 203 6 30 369 47 396 4.87e-76 246
MS.gene000494.t1 MTR_8g035810 32.339 436 268 10 79 495 84 511 7.87e-75 244
MS.gene000494.t1 MTR_1g102220 31.120 482 295 12 34 495 43 507 2.13e-73 241
MS.gene000494.t1 MTR_8g035680 28.721 477 301 12 34 489 49 507 9.10e-68 226
MS.gene000494.t1 MTR_8g035760 28.330 473 307 13 34 489 49 506 1.34e-65 220
MS.gene000494.t1 MTR_8g035810 32.181 376 229 9 79 436 84 451 1.03e-61 209
MS.gene000494.t1 MTR_8g035680 28.286 350 224 7 157 489 21 360 3.49e-51 178
MS.gene000494.t1 MTR_6g084040 44.253 174 78 2 10 182 10 165 3.26e-44 154
MS.gene000494.t1 MTR_1g102210 29.630 351 199 10 155 490 40 357 5.82e-42 153
MS.gene000494.t1 MTR_1g070370 33.865 251 147 6 168 412 5 242 5.67e-39 142
MS.gene000494.t1 MTR_8g035810 29.739 306 192 7 79 367 84 383 3.96e-38 144
MS.gene000494.t1 MTR_7g079440 27.133 457 283 20 61 494 219 648 2.19e-34 137
MS.gene000494.t1 MTR_5g009110 25.319 470 285 17 77 495 117 571 2.03e-30 125
MS.gene000494.t1 MTR_1g062190 25.115 434 297 13 75 494 120 539 1.86e-29 122
MS.gene000494.t1 MTR_5g009110 24.714 437 265 15 109 495 1 423 9.33e-28 115
MS.gene000494.t1 MTR_7g079440 27.926 376 227 16 61 417 219 569 6.33e-27 114
MS.gene000494.t1 MTR_2g062670 35.602 191 116 4 148 337 49 233 2.34e-25 109
MS.gene000494.t1 MTR_2g062670 30.526 190 88 5 148 337 265 410 1.54e-17 85.5
MS.gene000494.t1 MTR_2g072270 24.190 463 267 20 63 489 104 518 3.68e-25 108
MS.gene000494.t1 MTR_1g050590 43.590 117 60 2 246 357 3 118 5.14e-25 100
MS.gene000494.t1 MTR_8g046580 48.039 102 50 2 369 469 193 292 6.46e-25 105
MS.gene000494.t1 MTR_1g101040 29.434 265 172 7 229 487 253 508 8.36e-24 104
MS.gene000494.t1 MTR_4g113650 23.061 490 305 13 39 496 72 521 1.27e-23 104
MS.gene000494.t1 MTR_3g093530 22.844 429 296 12 79 493 116 523 1.90e-23 103
MS.gene000494.t1 MTR_6g072490 28.409 264 176 7 229 487 251 506 9.74e-23 101
MS.gene000494.t1 MTR_1g101050 28.030 264 177 7 229 487 249 504 1.73e-22 100
MS.gene000494.t1 MTR_1g040110 37.795 127 76 1 109 232 41 167 2.70e-22 94.0
MS.gene000494.t1 MTR_7g006900 26.840 231 150 5 266 492 255 470 4.59e-22 99.4
MS.gene000494.t1 MTR_6g017325 23.980 392 267 13 109 492 137 505 2.93e-21 97.1
MS.gene000494.t1 MTR_1g085680 22.907 454 296 15 61 492 93 514 7.89e-21 95.9
MS.gene000494.t1 MTR_2g072400 23.356 441 298 14 70 493 98 515 8.33e-21 95.9
MS.gene000494.t1 MTR_0147s0030 22.857 455 299 13 59 493 108 530 1.61e-20 95.1
MS.gene000494.t1 MTR_8g042000 22.976 457 299 15 58 493 99 523 1.94e-20 94.7
MS.gene000494.t1 MTR_0025s0110 23.368 475 304 17 38 487 80 519 2.61e-20 94.4
MS.gene000494.t1 MTR_7g098550 23.356 441 299 11 61 495 91 498 3.61e-20 93.6
MS.gene000494.t1 MTR_3g014880 22.263 539 334 21 10 494 16 523 3.97e-20 94.0
MS.gene000494.t1 MTR_7g098550 22.902 441 309 10 61 495 91 506 1.15e-19 92.4
MS.gene000494.t1 MTR_6g008500 24.847 326 212 9 160 465 189 501 1.19e-19 92.4
MS.gene000494.t1 MTR_6g008620 25.000 460 274 19 25 442 38 468 1.21e-19 92.4
MS.gene000494.t1 MTR_2g072340 22.581 465 317 16 46 493 77 515 2.66e-19 91.3
MS.gene000494.t1 MTR_7g079440 27.972 286 169 13 61 327 219 486 3.40e-19 90.5
MS.gene000494.t1 MTR_5g095230 22.947 475 307 19 38 493 79 513 3.62e-19 90.9
MS.gene000494.t1 MTR_7g055793 23.144 458 296 14 58 493 45 468 3.99e-19 90.5
MS.gene000494.t1 MTR_5g009110 26.866 335 208 13 77 388 117 437 4.01e-19 90.1
MS.gene000494.t1 MTR_7g055793 23.144 458 296 14 58 493 100 523 4.15e-19 90.5
MS.gene000494.t1 MTR_2g055430 21.973 446 297 15 70 493 101 517 4.86e-19 90.5
MS.gene000494.t1 MTR_8g042020 22.678 463 292 14 58 493 99 522 5.92e-19 90.1
MS.gene000494.t1 MTR_8g008530 22.271 458 302 15 58 493 93 518 7.18e-19 89.7
MS.gene000494.t1 MTR_6g022450 24.781 343 227 10 163 493 175 498 1.41e-18 89.0
MS.gene000494.t1 MTR_2g023680 24.337 415 260 15 104 493 132 517 1.52e-18 89.0
MS.gene000494.t1 MTR_2g010250 27.174 276 177 8 236 494 237 505 1.64e-18 88.6
MS.gene000494.t1 MTR_6g008650 23.031 508 323 22 10 473 16 499 1.95e-18 88.6
MS.gene000494.t1 MTR_6g008600 27.003 337 197 13 134 449 167 475 2.28e-18 88.2
MS.gene000494.t1 MTR_1g069200 21.475 461 321 15 42 487 71 505 2.33e-18 88.2
MS.gene000494.t1 MTR_6g008530 27.350 234 152 7 242 465 270 495 4.91e-18 87.4
MS.gene000494.t1 MTR_2g055470 20.899 445 303 15 70 493 101 517 6.08e-18 87.0
MS.gene000494.t1 MTR_1g015860 21.495 535 343 18 6 495 27 529 8.78e-18 86.7
MS.gene000494.t1 MTR_1g036140 42.000 100 52 2 247 341 68 166 1.97e-17 80.1
MS.gene000494.t1 MTR_1g036140 37.113 97 53 4 10 99 10 105 2.02e-12 65.9
MS.gene000494.t1 MTR_2g072250 22.727 440 301 14 70 493 97 513 2.36e-17 85.1
MS.gene000494.t1 MTR_8g104030 23.750 240 165 5 233 460 8 241 2.46e-17 82.8
MS.gene000494.t1 MTR_8g042060 22.272 449 302 14 63 493 104 523 3.05e-17 84.7
MS.gene000494.t1 MTR_7g012860 26.496 234 154 7 235 462 241 462 3.19e-17 84.7
MS.gene000494.t1 MTR_0287s0060 26.496 234 154 7 235 462 241 462 3.19e-17 84.7
MS.gene000494.t1 MTR_8g098565 29.213 178 122 3 295 469 302 478 4.14e-17 84.3
MS.gene000494.t1 MTR_6g042540 21.923 520 319 17 5 473 9 492 4.94e-17 84.3
MS.gene000494.t1 MTR_8g036185 24.848 330 218 9 163 470 168 489 5.35e-17 84.0
MS.gene000494.t1 MTR_6g042610 22.699 489 294 16 33 473 41 493 1.17e-16 83.2
MS.gene000494.t1 MTR_8g042060 26.733 202 131 4 297 493 298 487 1.24e-16 82.8
MS.gene000494.t1 MTR_5g070920 26.293 232 157 5 233 455 233 459 1.51e-16 82.8
MS.gene000494.t1 MTR_5g034900 27.315 216 152 4 282 494 304 517 1.52e-16 82.8
MS.gene000494.t1 MTR_3g104560 27.969 261 164 9 245 495 156 402 1.80e-16 81.6
MS.gene000494.t1 MTR_8g035790 40.404 99 55 3 398 494 1 97 1.92e-16 75.5
MS.gene000494.t1 MTR_4g104610 22.703 370 240 10 144 487 142 491 2.17e-16 82.0
MS.gene000494.t1 MTR_3g104560 27.969 261 164 9 245 495 291 537 2.26e-16 82.0
MS.gene000494.t1 MTR_8g076290 26.852 216 138 7 242 444 242 450 2.55e-16 82.0
MS.gene000494.t1 MTR_2g010290 25.283 265 180 7 236 494 280 532 2.72e-16 82.0
MS.gene000494.t1 MTR_5g009110 26.159 302 188 11 109 388 1 289 2.81e-16 80.1
MS.gene000494.t1 MTR_7g103450 29.961 257 158 12 242 493 267 506 2.92e-16 81.6
MS.gene000494.t1 MTR_6g008640 22.133 497 304 18 25 473 36 497 3.48e-16 81.6
MS.gene000494.t1 MTR_8g012585 21.519 395 278 10 121 494 66 449 3.84e-16 81.3
MS.gene000494.t1 MTR_1g022040 22.274 431 305 12 70 493 95 502 4.97e-16 80.9
MS.gene000494.t1 MTR_8g469360 22.844 429 282 14 85 493 24 423 6.47e-16 80.1
MS.gene000494.t1 MTR_8g104100 23.558 208 146 4 260 460 21 222 6.59e-16 78.2
MS.gene000494.t1 MTR_2g062680 32.353 136 61 2 286 420 32 137 6.98e-16 76.3
MS.gene000494.t1 MTR_2g072310 27.136 199 134 4 297 493 161 350 9.39e-16 79.0
MS.gene000494.t1 MTR_2g072380 27.638 199 133 4 297 493 161 350 9.56e-16 79.0
MS.gene000494.t1 MTR_0181s0030 24.219 256 180 6 223 470 224 473 9.77e-16 80.1
MS.gene000494.t1 MTR_8g042040 22.440 459 282 15 58 493 99 506 9.97e-16 80.1
MS.gene000494.t1 MTR_2g061750 30.055 183 103 8 74 237 12 188 1.01e-15 76.3
MS.gene000494.t1 MTR_2g061740 30.055 183 103 8 74 237 12 188 1.14e-15 76.3
MS.gene000494.t1 MTR_2g072380 27.638 199 133 4 297 493 301 490 1.42e-15 79.3
MS.gene000494.t1 MTR_6g004570 43.519 108 39 4 243 332 6 109 1.66e-15 76.6
MS.gene000494.t1 MTR_2g010320 24.104 307 209 10 203 494 206 503 2.00e-15 79.0
MS.gene000494.t1 MTR_2g010330 28.249 177 124 3 295 469 305 480 3.29e-15 78.6
MS.gene000494.t1 MTR_0171s0030 26.357 258 171 7 222 467 138 388 3.79e-15 77.8
MS.gene000494.t1 MTR_5g070690 25.101 247 168 5 240 476 238 477 4.47e-15 78.2
MS.gene000494.t1 MTR_5g070800 25.101 247 168 5 240 476 238 477 4.47e-15 78.2
MS.gene000494.t1 MTR_6g008430 29.940 167 109 4 284 449 307 466 7.41e-15 77.4
MS.gene000494.t1 MTR_7g012330 24.786 234 157 7 242 469 249 469 8.10e-15 77.0
MS.gene000494.t1 MTR_2g010280 25.820 244 169 5 236 469 235 476 8.64e-15 77.0
MS.gene000494.t1 MTR_5g091760 21.569 357 244 11 111 463 123 447 1.29e-14 76.6
MS.gene000494.t1 MTR_6g084770 25.726 241 159 7 233 460 233 466 1.40e-14 76.6
MS.gene000494.t1 MTR_2g010380 22.951 244 176 5 236 469 241 482 2.57e-14 75.5
MS.gene000494.t1 MTR_4g104540 29.448 163 109 3 282 444 220 376 3.47e-14 74.7
MS.gene000494.t1 MTR_5g070830 25.126 199 140 3 266 460 382 575 3.82e-14 75.5
MS.gene000494.t1 MTR_1g091003 24.771 218 156 5 245 462 248 457 3.91e-14 75.1
MS.gene000494.t1 MTR_4g094775 23.932 234 162 6 240 473 250 467 4.27e-14 75.1
MS.gene000494.t1 MTR_4g104570 30.464 151 99 3 294 444 1 145 5.62e-14 71.2
MS.gene000494.t1 MTR_1g091023 24.545 220 154 6 245 462 248 457 6.32e-14 74.3
MS.gene000494.t1 MTR_5g070710 24.000 325 215 10 145 455 151 457 6.52e-14 74.3
MS.gene000494.t1 MTR_4g088420 26.519 181 127 3 294 473 31 206 7.87e-14 71.6
MS.gene000494.t1 MTR_0171s0010 27.354 223 142 8 254 469 266 475 9.20e-14 73.9
MS.gene000494.t1 MTR_4g088195 21.925 374 246 14 121 471 128 478 9.35e-14 73.9
MS.gene000494.t1 MTR_2g072260 21.065 432 298 14 80 493 104 510 1.03e-13 73.9
MS.gene000494.t1 MTR_1g091010 24.312 218 157 5 245 462 247 456 1.08e-13 73.6
MS.gene000494.t1 MTR_8g063280 26.131 199 139 4 267 463 272 464 1.62e-13 73.2
MS.gene000494.t1 MTR_4g031820 21.789 436 288 14 70 493 111 505 2.26e-13 72.8
MS.gene000494.t1 MTR_6g084900 22.944 231 163 5 240 460 3 228 2.82e-13 70.5
MS.gene000494.t1 MTR_7g075610 28.155 206 128 6 266 463 274 467 3.20e-13 72.0
MS.gene000494.t1 MTR_2g072420 30.070 143 94 3 356 496 5 143 3.49e-13 67.4
MS.gene000494.t1 MTR_5g026520 27.429 175 118 5 277 448 292 460 3.77e-13 72.0
MS.gene000494.t1 MTR_2g061200 21.075 465 291 14 64 493 105 528 3.87e-13 72.0
MS.gene000494.t1 MTR_4g031820 22.646 446 294 16 70 493 111 527 4.06e-13 72.0
MS.gene000494.t1 MTR_3g436390 26.522 230 154 8 232 455 238 458 4.54e-13 71.6
MS.gene000494.t1 MTR_4g077210 25.229 218 154 4 233 448 241 451 6.39e-13 71.2
MS.gene000494.t1 MTR_5g010750 20.432 509 351 18 1 494 1 470 6.74e-13 71.2
MS.gene000494.t1 MTR_5g007460 22.822 241 157 4 230 470 236 447 6.91e-13 71.2
MS.gene000494.t1 MTR_5g470730 25.758 198 133 3 233 420 233 426 7.05e-13 70.9
MS.gene000494.t1 MTR_4g078110 27.513 189 130 4 257 444 240 422 7.82e-13 70.9
MS.gene000494.t1 MTR_0022s0290 24.255 235 159 8 233 455 245 472 9.86e-13 70.9
MS.gene000494.t1 MTR_2g010300 25.490 204 133 5 295 494 301 489 1.01e-12 70.5
MS.gene000494.t1 MTR_8g089800 26.337 243 162 7 239 473 237 470 1.12e-12 70.5
MS.gene000494.t1 MTR_5g070700 22.692 260 183 6 240 489 240 491 1.14e-12 70.5
MS.gene000494.t1 MTR_8g012970 25.778 225 157 4 257 480 258 473 1.29e-12 70.1
MS.gene000494.t1 MTR_1g107295 21.538 325 220 8 157 460 165 475 1.38e-12 70.1
MS.gene000494.t1 MTR_5g056720 25.781 256 154 8 244 489 191 420 1.43e-12 69.7
MS.gene000494.t1 MTR_4g088400 25.610 246 171 6 233 473 256 494 1.72e-12 70.1
MS.gene000494.t1 MTR_4g104550 22.082 317 212 11 143 444 141 437 2.15e-12 69.7
MS.gene000494.t1 MTR_5g010750 20.877 479 327 17 1 464 1 442 2.36e-12 69.3
MS.gene000494.t1 MTR_4g026200 22.511 231 170 7 235 463 237 460 2.65e-12 69.3
MS.gene000494.t1 MTR_3g076530 24.138 232 153 8 240 463 251 467 2.86e-12 69.3
MS.gene000494.t1 MTR_1g031700 25.616 203 131 7 266 462 271 459 3.14e-12 68.9
MS.gene000494.t1 MTR_1750s0010 25.658 152 107 3 293 444 1 146 3.25e-12 65.1
MS.gene000494.t1 MTR_5g018500 24.074 162 116 4 306 465 4 160 3.31e-12 65.9
MS.gene000494.t1 MTR_4g088170 22.074 376 245 15 121 471 128 480 4.19e-12 68.9
MS.gene000494.t1 MTR_4g088160 20.755 371 246 14 121 467 128 474 4.77e-12 68.6
MS.gene000494.t1 MTR_1g107300 23.000 200 130 5 300 494 9 189 5.40e-12 65.9
MS.gene000494.t1 MTR_3g025260 22.957 257 179 8 220 466 228 475 1.20e-11 67.4
MS.gene000494.t1 MTR_5g019010 22.876 459 296 18 32 464 40 466 1.40e-11 67.0
MS.gene000494.t1 MTR_7g056103 21.162 482 325 19 6 460 16 469 1.54e-11 67.0
MS.gene000494.t1 MTR_4g088425 27.755 245 161 8 233 470 239 474 1.60e-11 67.0
MS.gene000494.t1 MTR_5g007450 23.109 238 144 6 230 463 259 461 1.98e-11 66.6
MS.gene000494.t1 MTR_1g031710 26.590 173 112 5 253 420 67 229 2.16e-11 65.5
MS.gene000494.t1 MTR_7g075540 27.053 207 128 8 266 463 272 464 2.26e-11 66.2
MS.gene000494.t1 MTR_4g062500 21.370 365 244 12 121 460 127 473 2.34e-11 66.2
MS.gene000494.t1 MTR_5g070850 21.333 225 162 5 240 454 240 459 2.36e-11 66.2
MS.gene000494.t1 MTR_4g088405 28.125 192 130 4 284 473 223 408 2.46e-11 66.2
MS.gene000494.t1 MTR_1g023730 22.788 373 250 11 114 463 118 475 2.85e-11 66.2
MS.gene000494.t1 MTR_5g070840 26.619 139 97 2 324 460 1 136 3.24e-11 62.4
MS.gene000494.t1 MTR_1g103670 25.405 185 119 6 266 444 271 442 3.73e-11 65.9
MS.gene000494.t1 MTR_4g109470 22.594 239 170 5 233 463 236 467 3.78e-11 65.9
MS.gene000494.t1 MTR_2g450040 26.016 246 162 10 228 462 242 478 4.70e-11 65.5
MS.gene000494.t1 MTR_3g076550 24.274 379 241 15 121 487 128 472 5.39e-11 65.1
MS.gene000494.t1 MTR_8g469300 22.650 234 163 7 222 444 226 452 5.99e-11 65.1
MS.gene000494.t1 MTR_5g007550 22.449 245 151 6 230 470 259 468 8.85e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000494.t1 AT2G23180 44.747 514 264 4 1 495 1 513 1.23e-159 463
MS.gene000494.t1 AT4G39490 43.822 518 269 4 1 496 1 518 9.02e-159 461
MS.gene000494.t1 AT2G21910 46.771 511 254 7 1 496 1 508 1.47e-153 447
MS.gene000494.t1 AT4G39500 44.246 504 251 6 12 494 22 516 4.92e-149 436
MS.gene000494.t1 AT4G39480 44.773 507 264 3 6 496 9 515 1.91e-148 434
MS.gene000494.t1 AT1G57750 42.262 504 271 4 1 494 3 496 3.96e-147 431
MS.gene000494.t1 AT1G65340 43.478 506 264 4 3 493 4 502 7.51e-145 425
MS.gene000494.t1 AT4G39510 42.886 499 258 4 14 494 16 505 5.91e-144 423
MS.gene000494.t1 AT1G47620 44.050 479 244 4 33 494 44 515 7.32e-144 423
MS.gene000494.t1 AT5G52320 44.239 486 250 5 22 493 23 501 1.03e-143 422
MS.gene000494.t1 AT4G39500 44.894 470 242 4 38 494 1 466 1.23e-143 421
MS.gene000494.t1 AT4G32170 43.366 505 251 7 12 494 12 503 7.49e-143 420
MS.gene000494.t1 AT5G52320 44.283 481 247 5 22 488 23 496 2.76e-142 418
MS.gene000494.t1 AT5G08250 39.293 509 286 8 6 496 39 542 8.57e-129 385
MS.gene000494.t1 AT5G23190 38.142 506 297 5 6 496 38 542 1.31e-128 385
MS.gene000494.t1 AT5G02900 41.865 504 236 9 12 494 12 479 7.78e-127 378
MS.gene000494.t1 AT5G08250 39.627 482 268 8 33 496 4 480 3.58e-124 372
MS.gene000494.t1 AT3G26125 38.911 496 276 8 25 496 42 534 7.44e-117 355
MS.gene000494.t1 AT1G57750 40.278 432 238 4 1 422 3 424 1.42e-113 342
MS.gene000494.t1 AT1G63710 38.589 482 273 9 33 496 33 509 3.15e-113 345
MS.gene000494.t1 AT1G01600 38.160 511 286 11 13 496 8 515 1.87e-112 343
MS.gene000494.t1 AT1G13150 38.966 503 278 13 15 496 25 519 2.97e-112 342
MS.gene000494.t1 AT2G45970 38.763 485 271 9 33 496 33 512 4.67e-112 342
MS.gene000494.t1 AT1G13140 38.398 487 272 11 31 496 47 526 7.73e-112 341
MS.gene000494.t1 AT1G24540 37.605 476 282 5 33 494 46 520 1.20e-111 340
MS.gene000494.t1 AT5G58860 38.353 498 289 8 12 494 14 508 2.39e-110 337
MS.gene000494.t1 AT4G00360 37.917 509 288 10 13 496 8 513 4.78e-110 337
MS.gene000494.t1 AT1G13140 37.448 478 263 10 31 496 47 500 1.29e-108 332
MS.gene000494.t1 AT3G56630 35.967 481 275 15 33 495 34 499 8.36e-87 276
MS.gene000494.t1 AT2G27690 36.806 432 254 8 74 495 73 495 4.42e-85 271
MS.gene000494.t1 AT1G34540 34.937 478 283 14 33 495 34 498 5.00e-85 271
MS.gene000494.t1 AT1G69500 31.931 523 307 12 13 495 11 524 7.44e-84 269
MS.gene000494.t1 AT2G45510 34.115 469 285 12 34 487 42 501 1.07e-79 258
MS.gene000494.t1 AT3G48520 34.240 441 262 9 69 495 74 500 3.57e-79 256
MS.gene000494.t1 AT2G44890 33.053 475 282 16 34 487 42 501 1.30e-76 249
MS.gene000494.t1 AT5G63450 33.949 433 257 11 77 494 84 502 1.63e-74 244
MS.gene000494.t1 AT5G63450 33.949 433 257 11 77 494 142 560 1.12e-73 243
MS.gene000494.t1 AT2G44890 31.915 470 276 14 34 487 42 483 9.00e-73 239
MS.gene000494.t1 AT3G01900 31.315 479 303 11 26 494 28 490 3.91e-71 234
MS.gene000494.t1 AT1G31800 26.711 453 292 18 61 495 140 570 4.68e-34 135
MS.gene000494.t1 AT3G53130 26.376 436 289 16 75 494 120 539 6.41e-31 126
MS.gene000494.t1 AT2G26710 24.276 449 294 13 61 493 96 514 3.72e-26 112
MS.gene000494.t1 AT2G46950 23.333 450 300 14 59 492 148 568 1.90e-24 107
MS.gene000494.t1 AT2G46960 22.926 458 300 15 57 492 89 515 4.00e-22 99.8
MS.gene000494.t1 AT5G52400 24.099 444 303 14 58 492 99 517 4.75e-22 99.8
MS.gene000494.t1 AT4G27710 25.109 458 286 20 57 491 91 514 3.72e-21 97.1
MS.gene000494.t1 AT1G66030 30.588 170 100 3 1 159 1 163 2.09e-20 88.6
MS.gene000494.t1 AT5G51900 38.806 134 67 2 216 334 3 136 2.86e-20 90.5
MS.gene000494.t1 AT5G24900 23.077 429 291 15 82 491 116 524 6.19e-20 93.2
MS.gene000494.t1 AT4G13310 26.302 384 235 15 75 444 93 442 1.16e-19 92.0
MS.gene000494.t1 AT2G27000 24.936 389 267 12 121 496 132 508 1.28e-19 92.0
MS.gene000494.t1 AT3G14660 22.907 454 302 17 57 493 89 511 1.38e-19 92.0
MS.gene000494.t1 AT5G24900 23.005 426 289 15 85 491 2 407 1.75e-19 90.9
MS.gene000494.t1 AT5G24910 21.639 476 316 17 46 494 87 532 1.80e-19 91.7
MS.gene000494.t1 AT3G14630 24.086 465 305 17 46 493 74 507 2.48e-19 91.3
MS.gene000494.t1 AT3G14650 22.609 460 296 17 57 493 89 511 2.78e-19 91.3
MS.gene000494.t1 AT3G14640 22.489 458 301 16 57 493 111 535 3.92e-19 90.9
MS.gene000494.t1 AT3G14640 22.489 458 301 16 57 493 89 513 4.47e-19 90.5
MS.gene000494.t1 AT3G14680 23.348 454 300 17 57 493 89 511 4.48e-19 90.5
MS.gene000494.t1 AT3G48300 26.829 328 221 11 167 489 164 477 4.72e-19 90.1
MS.gene000494.t1 AT3G48300 26.829 328 221 11 167 489 166 479 4.76e-19 90.1
MS.gene000494.t1 AT3G14630 24.086 465 305 17 46 493 129 562 4.79e-19 90.5
MS.gene000494.t1 AT4G13290 28.772 285 175 8 167 444 172 435 1.15e-18 89.0
MS.gene000494.t1 AT3G61040 28.302 212 145 5 253 463 255 460 1.33e-18 89.0
MS.gene000494.t1 AT3G25180 21.583 417 292 9 75 473 84 483 2.68e-18 88.2
MS.gene000494.t1 AT3G14620 23.673 452 288 16 56 486 92 507 8.28e-18 86.7
MS.gene000494.t1 AT4G15350 24.112 394 264 15 121 496 128 504 2.04e-17 85.5
MS.gene000494.t1 AT1G64940 22.878 271 197 4 227 489 237 503 6.00e-17 84.0
MS.gene000494.t1 AT2G46960 22.646 393 255 13 121 492 35 399 6.20e-17 83.2
MS.gene000494.t1 AT3G14690 21.769 441 300 15 70 493 99 511 7.32e-17 83.6
MS.gene000494.t1 AT3G14690 21.769 441 300 15 70 493 134 546 8.72e-17 83.6
MS.gene000494.t1 AT3G20140 25.316 316 211 11 152 459 166 464 1.25e-16 82.8
MS.gene000494.t1 AT3G14660 26.493 268 172 9 236 493 113 365 1.46e-16 81.6
MS.gene000494.t1 AT4G37340 24.251 334 229 11 121 448 125 440 1.49e-16 82.8
MS.gene000494.t1 AT3G20940 25.287 348 233 11 121 455 135 468 7.25e-16 80.5
MS.gene000494.t1 AT3G20110 25.373 335 231 9 121 450 132 452 8.28e-16 80.5
MS.gene000494.t1 AT1G64950 24.771 218 158 3 274 489 289 502 1.76e-15 79.3
MS.gene000494.t1 AT3G48270 26.950 282 184 12 167 442 166 431 2.13e-15 79.0
MS.gene000494.t1 AT5G38450 22.469 405 263 11 109 492 140 514 5.81e-15 77.8
MS.gene000494.t1 AT2G45580 26.050 238 152 8 235 463 96 318 5.91e-15 76.6
MS.gene000494.t1 AT3G20935 29.480 173 111 5 294 462 134 299 7.95e-15 76.3
MS.gene000494.t1 AT4G15360 24.198 343 231 13 121 450 133 459 9.50e-15 77.0
MS.gene000494.t1 AT2G45580 26.050 238 152 8 235 463 250 472 1.06e-14 77.0
MS.gene000494.t1 AT5G06900 25.108 231 158 7 240 467 247 465 1.81e-14 76.3
MS.gene000494.t1 AT5G35715 23.571 420 246 16 71 460 23 397 1.12e-13 73.6
MS.gene000494.t1 AT3G48310 24.290 317 214 11 163 471 163 461 1.22e-13 73.6
MS.gene000494.t1 AT4G13770 22.944 231 173 4 238 467 241 467 1.63e-13 73.2
MS.gene000494.t1 AT1G01190 26.699 206 135 7 298 494 338 536 1.87e-13 73.2
MS.gene000494.t1 AT1G01190 26.699 206 135 7 298 494 333 531 2.07e-13 72.8
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 170 511 3.23e-13 72.4
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 170 511 3.23e-13 72.4
MS.gene000494.t1 AT2G12190 23.636 220 160 4 274 489 289 504 3.42e-13 72.0
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 33 374 3.48e-13 71.6
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 33 374 3.48e-13 71.6
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 33 374 3.48e-13 71.6
MS.gene000494.t1 AT3G20080 24.722 360 234 12 156 496 33 374 3.48e-13 71.6
MS.gene000494.t1 AT3G48280 23.944 284 189 8 168 442 166 431 4.62e-13 71.6
MS.gene000494.t1 AT1G66540 24.080 299 197 10 159 448 50 327 5.97e-13 70.9
MS.gene000494.t1 AT5G47990 22.368 304 216 9 155 449 169 461 6.61e-13 71.2
MS.gene000494.t1 AT1G67110 24.889 225 150 4 273 492 298 508 9.34e-13 70.9
MS.gene000494.t1 AT4G37410 23.197 319 225 9 145 459 147 449 1.16e-12 70.5
MS.gene000494.t1 AT3G26270 24.691 243 161 7 233 465 240 470 1.44e-12 70.1
MS.gene000494.t1 AT1G64930 25.110 227 161 6 274 495 288 510 1.76e-12 70.1
MS.gene000494.t1 AT2G46660 22.054 331 237 11 138 462 178 493 2.05e-12 69.7
MS.gene000494.t1 AT3G03470 23.256 258 174 5 244 494 269 509 2.06e-12 69.7
MS.gene000494.t1 AT2G45560 22.489 458 297 17 71 495 77 509 2.26e-12 69.7
MS.gene000494.t1 AT4G20240 23.902 410 260 15 29 416 34 413 2.29e-12 69.3
MS.gene000494.t1 AT1G50520 23.032 343 236 14 121 450 138 465 2.73e-12 69.3
MS.gene000494.t1 AT1G33720 25.238 210 145 5 293 496 200 403 3.48e-12 68.6
MS.gene000494.t1 AT5G10610 23.361 488 293 23 9 459 7 450 4.41e-12 68.6
MS.gene000494.t1 AT2G24180 23.237 241 165 6 256 487 262 491 5.30e-12 68.6
MS.gene000494.t1 AT3G20100 24.104 307 208 12 156 450 169 462 7.10e-12 68.2
MS.gene000494.t1 AT4G37400 24.415 299 206 9 166 459 166 449 9.43e-12 67.8
MS.gene000494.t1 AT1G66540 23.875 289 190 10 169 448 1 268 9.54e-12 66.6
MS.gene000494.t1 AT2G26170 24.409 254 173 7 251 494 277 521 1.13e-11 67.4
MS.gene000494.t1 AT2G26170 24.409 254 173 7 251 494 194 438 1.24e-11 67.0
MS.gene000494.t1 AT3G20130 26.728 217 145 8 241 450 253 462 1.31e-11 67.4
MS.gene000494.t1 AT3G20130 26.728 217 145 8 241 450 225 434 1.58e-11 67.0
MS.gene000494.t1 AT2G30770 27.072 181 127 3 292 472 293 468 1.75e-11 66.6
MS.gene000494.t1 AT2G45570 21.340 403 270 11 118 494 128 509 1.75e-11 67.0
MS.gene000494.t1 AT2G45550 24.464 233 162 6 270 496 286 510 2.49e-11 66.2
MS.gene000494.t1 AT5G05260 25.962 208 145 5 241 447 273 472 3.95e-11 65.9
MS.gene000494.t1 AT2G23220 23.780 328 229 10 121 444 141 451 4.25e-11 65.5
MS.gene000494.t1 AT3G26200 22.590 363 247 13 121 465 120 466 8.27e-11 64.7

Find 100 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATTGGAGAAATATTT+TGG 0.134143 7.1:+64180938 MS.gene000494:CDS
GCTCTCTCACATGGAATTTC+AGG 0.159034 7.1:-64181519 None:intergenic
TTCTGAGAAATCCACCTTTC+TGG 0.163522 7.1:-64182167 None:intergenic
TACCATCAAGTGAACATAAT+TGG 0.197349 7.1:+64181919 MS.gene000494:CDS
TCTTGTGGAAGCTGCAAAAT+TGG 0.201502 7.1:+64181592 MS.gene000494:CDS
TTAGGTCTGATTCACATATT+TGG 0.218713 7.1:+64181268 MS.gene000494:CDS
TCGGAAGGGTGGAGGAAATA+TGG 0.227134 7.1:+64182120 MS.gene000494:CDS
GAACATAATTGGAAAGATTT+AGG 0.232318 7.1:+64181930 MS.gene000494:CDS
TTGTCCTTGCATTTCTCTTT+TGG 0.233225 7.1:-64181691 None:intergenic
TGTGATGTGTTGCACGTTCT+TGG 0.254034 7.1:-64181172 None:intergenic
AACAGAAAGACTTGGGATTA+TGG 0.258538 7.1:-64182342 None:intergenic
AACATATGTTCTGTGGTATT+AGG 0.264357 7.1:+64181465 MS.gene000494:CDS
TTCCAATTATGTTCACTTGA+TGG 0.285884 7.1:-64181921 None:intergenic
ACGGGAAAGGAAACGATTTC+AGG 0.291841 7.1:+64181214 MS.gene000494:CDS
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.1:+64182268 MS.gene000494:CDS
TGCAGCTTCCACAAGAGTTT+TGG 0.307166 7.1:-64181585 None:intergenic
TTCTGTTGAGCCTCCAATAA+TGG 0.310818 7.1:-64180984 None:intergenic
GACATAACTTTAAAACAAAA+TGG 0.310827 7.1:+64181087 MS.gene000494:CDS
TTAACCATGGTCCTTCAAAA+AGG 0.318367 7.1:-64181119 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7.1:+64182235 MS.gene000494:CDS
AGATCAATAGAAAGACATTT+AGG 0.370231 7.1:-64181495 None:intergenic
TGGAAAGATTTAGGAGCAAA+AGG 0.375361 7.1:+64181939 MS.gene000494:CDS
GAAACACACCAATCACAAAA+TGG 0.375398 7.1:+64181004 MS.gene000494:CDS
ACAGAAAGACTTGGGATTAT+GGG 0.382050 7.1:-64182341 None:intergenic
AAATTCATTGCTTTCAATGC+TGG 0.386232 7.1:+64182218 MS.gene000494:CDS
CGGAAGGGTGGAGGAAATAT+GGG 0.397563 7.1:+64182121 MS.gene000494:CDS
CTATTAGCTCGGGCCTTACT+TGG 0.399113 7.1:+64181829 MS.gene000494:CDS
GAAAGCAATGAATTTGTAAG+AGG 0.414835 7.1:-64182210 None:intergenic
TGTGCAGATTTATGCTCAAA+AGG 0.438259 7.1:-64182026 None:intergenic
GTGATGTGTTGCACGTTCTT+GGG 0.444348 7.1:-64181171 None:intergenic
CGGAGGACACATTGTTCATA+AGG 0.457115 7.1:+64181553 MS.gene000494:CDS
AGCAAGTTAGTTTACCTACA+TGG 0.459663 7.1:+64181966 MS.gene000494:CDS
ACACATGAAACATGGCTTGA+AGG 0.461488 7.1:+64182370 MS.gene000494:CDS
ATCACAAAATGGCCTGTGCT+TGG 0.463931 7.1:+64181015 MS.gene000494:CDS
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7.1:+64182236 MS.gene000494:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.474975 7.1:+64181940 MS.gene000494:CDS
CCTGTGCTTGGAATGCTACC+TGG 0.476136 7.1:+64181027 MS.gene000494:CDS
CTGCAAAATTGGTTTCAAGT+TGG 0.480614 7.1:+64181603 MS.gene000494:CDS
ATAATGTATGTGTTTGGCAT+TGG 0.480634 7.1:+64180925 None:intergenic
ATGTGCTTCCTAGTGGACAT+AGG 0.486334 7.1:+64182057 MS.gene000494:CDS
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7.1:+64182241 MS.gene000494:CDS
AGAATCTTAGCTTCAATCAA+AGG 0.493189 7.1:-64181876 None:intergenic
TTGCACGTTCTTGGGATCAC+TGG 0.495887 7.1:-64181163 None:intergenic
CTCTCTCACATGGAATTTCA+GGG 0.496357 7.1:-64181518 None:intergenic
GCTTGGAATTTAAACCAGAA+AGG 0.498570 7.1:+64182153 MS.gene000494:CDS
TCAATTAATCTACTTGCAGC+TGG 0.503336 7.1:+64181798 MS.gene000494:CDS
TGTCCACTAGGAAGCACATC+AGG 0.504227 7.1:-64182053 None:intergenic
ACATTGATAATGTATGTGTT+TGG 0.505869 7.1:+64180919 None:intergenic
AATATCATTATGAATGAAGT+AGG 0.506125 7.1:+64181732 MS.gene000494:CDS
CGGGAAAGGAAACGATTTCA+GGG 0.506225 7.1:+64181215 MS.gene000494:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.1:+64182136 MS.gene000494:CDS
TGTGTCCTCCGCTAGTGTAA+AGG 0.525215 7.1:-64181541 None:intergenic
TGGAAGAGATACTATTAGCT+CGG 0.527180 7.1:+64181818 MS.gene000494:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7.1:-64182242 None:intergenic
AGCACAAAATTCGAAAACTA+CGG 0.529788 7.1:+64181195 MS.gene000494:CDS
ATTATGAATGAAGTAGGAGA+TGG 0.541098 7.1:+64181738 MS.gene000494:CDS
TGTGCTTCCTAGTGGACATA+GGG 0.549066 7.1:+64182058 MS.gene000494:CDS
TCGTTGCAATCCATTATTGG+AGG 0.556704 7.1:+64180974 MS.gene000494:CDS
GAAAGGTGGATTTCTCAGAA+AGG 0.556835 7.1:+64182170 MS.gene000494:CDS
ATACTCCGTCGGAAGGGTGG+AGG 0.557016 7.1:+64182112 MS.gene000494:CDS
TGGAATTTAAACCAGAAAGG+TGG 0.560001 7.1:+64182156 MS.gene000494:CDS
GGAAGAGATACTATTAGCTC+GGG 0.561271 7.1:+64181819 MS.gene000494:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.1:+64182105 MS.gene000494:CDS
TGTAAGACAACAGAAAGACT+TGG 0.564398 7.1:-64182350 None:intergenic
AGTGTAAAGGCTCTCTCACA+TGG 0.565394 7.1:-64181528 None:intergenic
CCAGGTAGCATTCCAAGCAC+AGG 0.567414 7.1:-64181027 None:intergenic
CACAACGTATCCAACATTCA+CGG 0.568204 7.1:+64181057 MS.gene000494:CDS
TCTATACTCCGTCGGAAGGG+TGG 0.569109 7.1:+64182109 MS.gene000494:CDS
GCACAAAATTCGAAAACTAC+GGG 0.571099 7.1:+64181196 MS.gene000494:CDS
TATTTCCTCCACCCTTCCGA+CGG 0.573423 7.1:-64182117 None:intergenic
CTTTGACAACATATGTTCTG+TGG 0.575024 7.1:+64181458 MS.gene000494:CDS
GTCTACATAACCGTGAATGT+TGG 0.575206 7.1:-64181067 None:intergenic
ATCTTAAGCCAAAACTCTTG+TGG 0.576068 7.1:+64181577 MS.gene000494:CDS
TTCTCTATACTCCGTCGGAA+GGG 0.579589 7.1:+64182106 MS.gene000494:CDS
AAAGCAATGAATTTGTAAGA+GGG 0.580193 7.1:-64182209 None:intergenic
ATGTTCATATTTGTTAACCA+TGG 0.582823 7.1:-64181132 None:intergenic
CACAGAACATATGTTGTCAA+AGG 0.582988 7.1:-64181457 None:intergenic
GATTTATGCTCAAAAGGTAT+CGG 0.588173 7.1:-64182020 None:intergenic
GGTGGATTTCTCAGAAAGGA+GGG 0.598377 7.1:+64182174 MS.gene000494:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.1:+64181988 MS.gene000494:CDS
AAACCTGATGTGCTTCCTAG+TGG 0.606972 7.1:+64182050 MS.gene000494:CDS
GAATTATCACATTCAAGTGG+TGG 0.608088 7.1:+64182310 MS.gene000494:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7.1:+64182307 MS.gene000494:CDS
AGGTGGATTTCTCAGAAAGG+AGG 0.609698 7.1:+64182173 MS.gene000494:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.1:+64182101 MS.gene000494:CDS
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.1:+64182225 MS.gene000494:CDS
AAATTCGAAAACTACGGGAA+AGG 0.623669 7.1:+64181201 MS.gene000494:CDS
GTTGTCTTACACATGAAACA+TGG 0.631184 7.1:+64182362 MS.gene000494:CDS
GACTCAACCCTATGTCCACT+AGG 0.632364 7.1:-64182065 None:intergenic
GTAAGACAACAGAAAGACTT+GGG 0.634736 7.1:-64182349 None:intergenic
CTTCACATAAAGCTCCATGT+AGG 0.635547 7.1:-64181980 None:intergenic
ATGGTTAACAAATATGAACA+TGG 0.638409 7.1:+64181134 MS.gene000494:CDS
GGAAGGGTGGAGGAAATATG+GGG 0.642362 7.1:+64182122 MS.gene000494:CDS
AAAACCAAAAGAGAAATGCA+AGG 0.650772 7.1:+64181687 MS.gene000494:CDS
TTATGCTCAAAAGGTATCGG+CGG 0.659417 7.1:-64182017 None:intergenic
GATACGTTGTGTAAGAGACC+AGG 0.668163 7.1:-64181045 None:intergenic
TGAGAGAGCCTTTACACTAG+CGG 0.678400 7.1:+64181533 MS.gene000494:CDS
TATCGGCGGATAAAGCCTCA+AGG 0.679760 7.1:-64182003 None:intergenic
ATAACTTTAAAACAAAATGG+AGG 0.687896 7.1:+64181090 MS.gene000494:CDS
GAGAGCCTTTACACTAGCGG+AGG 0.710609 7.1:+64181536 MS.gene000494:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCATTATGAATGAAGT+AGG + chr7.1:64181732-64181751 MS.gene000494:CDS 20.0%
!!! ATAACTTTAAAACAAAATGG+AGG + chr7.1:64181090-64181109 MS.gene000494:CDS 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG + chr7.1:64181430-64181449 MS.gene000494:CDS 20.0%
!!! GACATAACTTTAAAACAAAA+TGG + chr7.1:64181087-64181106 MS.gene000494:CDS 20.0%
!!! GTTACAAATTTTTTTCTCTA+CGG - chr7.1:64181361-64181380 None:intergenic 20.0%
! AAAGCAATGAATTTGTAAGA+GGG - chr7.1:64182212-64182231 None:intergenic 25.0%
! AGATCAATAGAAAGACATTT+AGG - chr7.1:64181498-64181517 None:intergenic 25.0%
! ATGGTTAACAAATATGAACA+TGG + chr7.1:64181134-64181153 MS.gene000494:CDS 25.0%
! GAACATAATTGGAAAGATTT+AGG + chr7.1:64181930-64181949 MS.gene000494:CDS 25.0%
!! ATGTTCATATTTGTTAACCA+TGG - chr7.1:64181135-64181154 None:intergenic 25.0%
AAAACCAAAAGAGAAATGCA+AGG + chr7.1:64181687-64181706 MS.gene000494:CDS 30.0%
AAATTCATTGCTTTCAATGC+TGG + chr7.1:64182218-64182237 MS.gene000494:CDS 30.0%
AACATATGTTCTGTGGTATT+AGG + chr7.1:64181465-64181484 MS.gene000494:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG + chr7.1:64182268-64182287 MS.gene000494:CDS 30.0%
AGAATCTTAGCTTCAATCAA+AGG - chr7.1:64181879-64181898 None:intergenic 30.0%
AGCACAAAATTCGAAAACTA+CGG + chr7.1:64181195-64181214 MS.gene000494:CDS 30.0%
ATTATGAATGAAGTAGGAGA+TGG + chr7.1:64181738-64181757 MS.gene000494:CDS 30.0%
GAAAGCAATGAATTTGTAAG+AGG - chr7.1:64182213-64182232 None:intergenic 30.0%
GTTGAATTATCACATTCAAG+TGG + chr7.1:64182307-64182326 MS.gene000494:CDS 30.0%
TACCATCAAGTGAACATAAT+TGG + chr7.1:64181919-64181938 MS.gene000494:CDS 30.0%
TTAGGTCTGATTCACATATT+TGG + chr7.1:64181268-64181287 MS.gene000494:CDS 30.0%
TTCCAATTATGTTCACTTGA+TGG - chr7.1:64181924-64181943 None:intergenic 30.0%
! GATTTATGCTCAAAAGGTAT+CGG - chr7.1:64182023-64182042 None:intergenic 30.0%
! TTCTTGGAGAAGGAATTTTT+AGG + chr7.1:64181250-64181269 MS.gene000494:CDS 30.0%
! TTTCAAGCAGGAAAATTTTC+AGG + chr7.1:64181320-64181339 MS.gene000494:CDS 30.0%
! TTTTCGTTGCAATCCATTAT+TGG + chr7.1:64180971-64180990 MS.gene000494:CDS 30.0%
!! TGGCATTGGAGAAATATTTT+GGG + chr7.1:64180939-64180958 MS.gene000494:CDS 30.0%
!! TTGGCATTGGAGAAATATTT+TGG + chr7.1:64180938-64180957 MS.gene000494:CDS 30.0%
!!! ATTTTTGAAGTTCTTGGAGA+AGG + chr7.1:64181240-64181259 MS.gene000494:CDS 30.0%
AAATTCGAAAACTACGGGAA+AGG + chr7.1:64181201-64181220 MS.gene000494:CDS 35.0%
AACAGAAAGACTTGGGATTA+TGG - chr7.1:64182345-64182364 None:intergenic 35.0%
ACAGAAAGACTTGGGATTAT+GGG - chr7.1:64182344-64182363 None:intergenic 35.0%
ATCTTAAGCCAAAACTCTTG+TGG + chr7.1:64181577-64181596 MS.gene000494:CDS 35.0%
CACAGAACATATGTTGTCAA+AGG - chr7.1:64181460-64181479 None:intergenic 35.0%
CTTTGACAACATATGTTCTG+TGG + chr7.1:64181458-64181477 MS.gene000494:CDS 35.0%
GAAACACACCAATCACAAAA+TGG + chr7.1:64181004-64181023 MS.gene000494:CDS 35.0%
GAATTATCACATTCAAGTGG+TGG + chr7.1:64182310-64182329 MS.gene000494:CDS 35.0%
GCACAAAATTCGAAAACTAC+GGG + chr7.1:64181196-64181215 MS.gene000494:CDS 35.0%
GCTTGGAATTTAAACCAGAA+AGG + chr7.1:64182153-64182172 MS.gene000494:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG + chr7.1:64181940-64181959 MS.gene000494:CDS 35.0%
GTAAGACAACAGAAAGACTT+GGG - chr7.1:64182352-64182371 None:intergenic 35.0%
GTTGTCTTACACATGAAACA+TGG + chr7.1:64182362-64182381 MS.gene000494:CDS 35.0%
TCAATTAATCTACTTGCAGC+TGG + chr7.1:64181798-64181817 MS.gene000494:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG + chr7.1:64181939-64181958 MS.gene000494:CDS 35.0%
TGGAAGAGATACTATTAGCT+CGG + chr7.1:64181818-64181837 MS.gene000494:CDS 35.0%
TGGAATTTAAACCAGAAAGG+TGG + chr7.1:64182156-64182175 MS.gene000494:CDS 35.0%
TGTAAGACAACAGAAAGACT+TGG - chr7.1:64182353-64182372 None:intergenic 35.0%
TGTGCAGATTTATGCTCAAA+AGG - chr7.1:64182029-64182048 None:intergenic 35.0%
TTAACCATGGTCCTTCAAAA+AGG - chr7.1:64181122-64181141 None:intergenic 35.0%
! AGCAAGTTAGTTTACCTACA+TGG + chr7.1:64181966-64181985 MS.gene000494:CDS 35.0%
! CTGCAAAATTGGTTTCAAGT+TGG + chr7.1:64181603-64181622 MS.gene000494:CDS 35.0%
! TTGTCCTTGCATTTCTCTTT+TGG - chr7.1:64181694-64181713 None:intergenic 35.0%
!! ACTTCACTCAATTTTCAAGC+AGG + chr7.1:64181308-64181327 MS.gene000494:CDS 35.0%
!!! AGGGAGATTTTTGAAGTTCT+TGG + chr7.1:64181234-64181253 MS.gene000494:CDS 35.0%
AATATGGGGAGAAGATTGCT+TGG + chr7.1:64182136-64182155 MS.gene000494:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG + chr7.1:64182370-64182389 MS.gene000494:CDS 40.0%
CACAACGTATCCAACATTCA+CGG + chr7.1:64181057-64181076 MS.gene000494:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG - chr7.1:64181845-64181864 None:intergenic 40.0%
CTCTCTCACATGGAATTTCA+GGG - chr7.1:64181521-64181540 None:intergenic 40.0%
CTTCACATAAAGCTCCATGT+AGG - chr7.1:64181983-64182002 None:intergenic 40.0%
GGAAGAGATACTATTAGCTC+GGG + chr7.1:64181819-64181838 MS.gene000494:CDS 40.0%
GTCTACATAACCGTGAATGT+TGG - chr7.1:64181070-64181089 None:intergenic 40.0%
GTGTATTCTCTATACTCCGT+CGG + chr7.1:64182101-64182120 MS.gene000494:CDS 40.0%
TCGTTGCAATCCATTATTGG+AGG + chr7.1:64180974-64180993 MS.gene000494:CDS 40.0%
TCTTGTGGAAGCTGCAAAAT+TGG + chr7.1:64181592-64181611 MS.gene000494:CDS 40.0%
TGACCATGCTTCCAAAAATG+AGG + chr7.1:64181398-64181417 MS.gene000494:CDS 40.0%
TTCCAAAAATGAGGTGCAAG+TGG + chr7.1:64181407-64181426 MS.gene000494:CDS 40.0%
TTCTGTTGAGCCTCCAATAA+TGG - chr7.1:64180987-64181006 None:intergenic 40.0%
! ATCCACTTGCACCTCATTTT+TGG - chr7.1:64181412-64181431 None:intergenic 40.0%
! GAAAGGTGGATTTCTCAGAA+AGG + chr7.1:64182170-64182189 MS.gene000494:CDS 40.0%
! GGAGGAACATTCCTTTTTGA+AGG + chr7.1:64181108-64181127 MS.gene000494:CDS 40.0%
! TTCTGAGAAATCCACCTTTC+TGG - chr7.1:64182170-64182189 None:intergenic 40.0%
!! CATTCCTTTTTGAAGGACCA+TGG + chr7.1:64181115-64181134 MS.gene000494:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG + chr7.1:64181842-64181861 MS.gene000494:CDS 40.0%
!! TTATGCTCAAAAGGTATCGG+CGG - chr7.1:64182020-64182039 None:intergenic 40.0%
AAACCTGATGTGCTTCCTAG+TGG + chr7.1:64182050-64182069 MS.gene000494:CDS 45.0%
ACCAAGGAGTTGTTTGGGTA+AGG + chr7.1:64182241-64182260 MS.gene000494:CDS 45.0%
ACGGGAAAGGAAACGATTTC+AGG + chr7.1:64181214-64181233 MS.gene000494:CDS 45.0%
AGTGTAAAGGCTCTCTCACA+TGG - chr7.1:64181531-64181550 None:intergenic 45.0%
ATCACAAAATGGCCTGTGCT+TGG + chr7.1:64181015-64181034 MS.gene000494:CDS 45.0%
ATTCTCTATACTCCGTCGGA+AGG + chr7.1:64182105-64182124 MS.gene000494:CDS 45.0%
CGGAGGACACATTGTTCATA+AGG + chr7.1:64181553-64181572 MS.gene000494:CDS 45.0%
CGGGAAAGGAAACGATTTCA+GGG + chr7.1:64181215-64181234 MS.gene000494:CDS 45.0%
GATACGTTGTGTAAGAGACC+AGG - chr7.1:64181048-64181067 None:intergenic 45.0%
GCTCTCTCACATGGAATTTC+AGG - chr7.1:64181522-64181541 None:intergenic 45.0%
GTGATGTGTTGCACGTTCTT+GGG - chr7.1:64181174-64181193 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG - chr7.1:64182245-64182264 None:intergenic 45.0%
TGAGAGAGCCTTTACACTAG+CGG + chr7.1:64181533-64181552 MS.gene000494:CDS 45.0%
TGTGATGTGTTGCACGTTCT+TGG - chr7.1:64181175-64181194 None:intergenic 45.0%
TTCTCTATACTCCGTCGGAA+GGG + chr7.1:64182106-64182125 MS.gene000494:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG + chr7.1:64182225-64182244 MS.gene000494:CDS 45.0%
! AGGTGGATTTCTCAGAAAGG+AGG + chr7.1:64182173-64182192 MS.gene000494:CDS 45.0%
! ATGTGCTTCCTAGTGGACAT+AGG + chr7.1:64182057-64182076 MS.gene000494:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG + chr7.1:64181988-64182007 MS.gene000494:CDS 45.0%
! GGTGGATTTCTCAGAAAGGA+GGG + chr7.1:64182174-64182193 MS.gene000494:CDS 45.0%
! TGCAGCTTCCACAAGAGTTT+TGG - chr7.1:64181588-64181607 None:intergenic 45.0%
! TGTGCTTCCTAGTGGACATA+GGG + chr7.1:64182058-64182077 MS.gene000494:CDS 45.0%
!! AGCACAGGCCATTTTGTGAT+TGG - chr7.1:64181015-64181034 None:intergenic 45.0%
!! GCACCTCATTTTTGGAAGCA+TGG - chr7.1:64181404-64181423 None:intergenic 45.0%
CGGAAGGGTGGAGGAAATAT+GGG + chr7.1:64182121-64182140 MS.gene000494:CDS 50.0%
CTATTAGCTCGGGCCTTACT+TGG + chr7.1:64181829-64181848 MS.gene000494:CDS 50.0%
GACTCAACCCTATGTCCACT+AGG - chr7.1:64182068-64182087 None:intergenic 50.0%
GCTGGACCAAGGAGTTGTTT+GGG + chr7.1:64182236-64182255 MS.gene000494:CDS 50.0%
GGAAGGGTGGAGGAAATATG+GGG + chr7.1:64182122-64182141 MS.gene000494:CDS 50.0%
TATCGGCGGATAAAGCCTCA+AGG - chr7.1:64182006-64182025 None:intergenic 50.0%
TATTTCCTCCACCCTTCCGA+CGG - chr7.1:64182120-64182139 None:intergenic 50.0%
TCGGAAGGGTGGAGGAAATA+TGG + chr7.1:64182120-64182139 MS.gene000494:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG + chr7.1:64182235-64182254 MS.gene000494:CDS 50.0%
TGTGTCCTCCGCTAGTGTAA+AGG - chr7.1:64181544-64181563 None:intergenic 50.0%
TTGCACGTTCTTGGGATCAC+TGG - chr7.1:64181166-64181185 None:intergenic 50.0%
! TGTCCACTAGGAAGCACATC+AGG - chr7.1:64182056-64182075 None:intergenic 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG + chr7.1:64181838-64181857 MS.gene000494:CDS 50.0%
CCAGGTAGCATTCCAAGCAC+AGG - chr7.1:64181030-64181049 None:intergenic 55.0%
CCTGTGCTTGGAATGCTACC+TGG + chr7.1:64181027-64181046 MS.gene000494:CDS 55.0%
GAGAGCCTTTACACTAGCGG+AGG + chr7.1:64181536-64181555 MS.gene000494:CDS 55.0%
TCTATACTCCGTCGGAAGGG+TGG + chr7.1:64182109-64182128 MS.gene000494:CDS 55.0%
ATACTCCGTCGGAAGGGTGG+AGG + chr7.1:64182112-64182131 MS.gene000494:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 64180928 64182418 64180928 ID=MS.gene000494
chr7.1 mRNA 64180928 64182418 64180928 ID=MS.gene000494.t1;Parent=MS.gene000494
chr7.1 exon 64180928 64182418 64180928 ID=MS.gene000494.t1.exon1;Parent=MS.gene000494.t1
chr7.1 CDS 64180928 64182418 64180928 ID=cds.MS.gene000494.t1;Parent=MS.gene000494.t1
Gene Sequence

>MS.gene000494

ATGTATGTGTTTGGCATTGGAGAAATATTTTGGGCAGTTCTTGTTTTCGTTGCAATCCATTATTGGAGGCTCAACAGAAACACACCAATCACAAAATGGCCTGTGCTTGGAATGCTACCTGGTCTCTTACACAACGTATCCAACATTCACGGTTATGTAGACATAACTTTAAAACAAAATGGAGGAACATTCCTTTTTGAAGGACCATGGTTAACAAATATGAACATGGTTTGCACCAGTGATCCCAAGAACGTGCAACACATCACAAGCACAAAATTCGAAAACTACGGGAAAGGAAACGATTTCAGGGAGATTTTTGAAGTTCTTGGAGAAGGAATTTTTAGGTCTGATTCACATATTTGGAAGTACAACAGAAAGCTACTTCACTCAATTTTCAAGCAGGAAAATTTTCAGGTATTTATTCAAAAAACCGTAGAGAAAAAAATTTGTAACTATCTTCTTGTATTTCTTGACCATGCTTCCAAAAATGAGGTGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAACATATGTTCTGTGGTATTAGGATTTGATCCTAAATGTCTTTCTATTGATCTCCCTGAAATTCCATGTGAGAGAGCCTTTACACTAGCGGAGGACACATTGTTCATAAGGCATCTTAAGCCAAAACTCTTGTGGAAGCTGCAAAATTGGTTTCAAGTTGGTGAAGAGAAACAATTTATAAAGAATAATAAATTTATTGATGAAATGTTGTATTCAGAAATCAAAACCAAAAGAGAAATGCAAGGACAACAAAAATTTGACTTGCTAAATATCATTATGAATGAAGTAGGAGATGGAGAAAATCTAATAGATGACAAGTTTTTGAGAGATACATCAATTAATCTACTTGCAGCTGGAAGAGATACTATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTTGCGACGCATCCTTTGATTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGTGAACATAATTGGAAAGATTTAGGAGCAAAAGGGTTTAGCAAGTTAGTTTACCTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCGCCGATACCTTTTGAGCATAAATCTGCACAGAAACCTGATGTGCTTCCTAGTGGACATAGGGTTGAGTCAAATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTCTCAGAAAGGAGGGATAGTTCATGTTCCCTCTTACAAATTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTCTTTCTGTTGTCTTACACATGAAACATGGCTTGAAGGTTAATCTCAAAAAAAGAAGCATTTAA
Protein sequence

>MS.gene000494.t1

MYVFGIGEIFWAVLVFVAIHYWRLNRNTPITKWPVLGMLPGLLHNVSNIHGYVDITLKQNGGTFLFEGPWLTNMNMVCTSDPKNVQHITSTKFENYGKGNDFREIFEVLGEGIFRSDSHIWKYNRKLLHSIFKQENFQVFIQKTVEKKICNYLLVFLDHASKNEVQVDLQDIFQRLTFDNICSVVLGFDPKCLSIDLPEIPCERAFTLAEDTLFIRHLKPKLLWKLQNWFQVGEEKQFIKNNKFIDEMLYSEIKTKREMQGQQKFDLLNIIMNEVGDGENLIDDKFLRDTSINLLAAGRDTISSGLTWFFWLVATHPLIEAKILEEIKENLPSSEHNWKDLGAKGFSKLVYLHGALCEALRLYPPIPFEHKSAQKPDVLPSGHRVESNTMIVYSLYSVGRVEEIWGEDCLEFKPERWISQKGGIVHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSLSVVLHMKHGLKVNLKKRSI