AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44556

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44556.t1 MTR_1g035670 90.278 504 49 0 1 504 1 504 0.0 961
MS.gene44556.t1 MTR_1g036130 84.055 508 77 1 1 504 1 508 0.0 884
MS.gene44556.t1 MTR_1g035760 83.532 504 60 1 1 504 1 481 0.0 858
MS.gene44556.t1 MTR_1g035860 86.897 435 57 0 10 444 16 450 0.0 790
MS.gene44556.t1 MTR_1g036010 72.941 510 131 4 1 504 1 509 0.0 783
MS.gene44556.t1 MTR_1g035830 72.299 509 136 3 1 504 1 509 0.0 764
MS.gene44556.t1 MTR_1g035940 70.784 510 142 4 1 504 1 509 0.0 753
MS.gene44556.t1 MTR_1g035750 65.551 508 170 3 1 504 1 507 0.0 699
MS.gene44556.t1 MTR_1g035580 63.209 511 168 6 1 504 1 498 0.0 659
MS.gene44556.t1 MTR_1g035790 60.474 506 196 4 1 504 1 504 0.0 649
MS.gene44556.t1 MTR_1g036200 62.749 502 172 6 10 504 8 501 0.0 648
MS.gene44556.t1 MTR_1g069715 75.676 407 93 3 84 484 1 407 0.0 642
MS.gene44556.t1 MTR_1g036270 60.583 515 190 7 1 504 1 513 0.0 642
MS.gene44556.t1 MTR_1g050362 60.792 505 188 6 7 503 5 507 0.0 634
MS.gene44556.t1 MTR_1g035800 60.624 513 190 6 1 502 1 512 0.0 621
MS.gene44556.t1 MTR_7g033580 53.924 497 217 5 10 504 10 496 0.0 561
MS.gene44556.t1 MTR_8g088470 54.141 495 214 6 11 502 7 491 0.0 560
MS.gene44556.t1 MTR_7g033570 52.716 497 223 6 10 504 10 496 0.0 548
MS.gene44556.t1 MTR_6g004630 49.012 506 249 6 2 504 6 505 4.82e-175 502
MS.gene44556.t1 MTR_6g004670 48.387 496 249 4 10 502 14 505 2.98e-172 495
MS.gene44556.t1 MTR_6g004590 45.753 518 263 5 1 504 4 517 4.37e-166 480
MS.gene44556.t1 MTR_6g004600 46.640 506 252 5 13 504 16 517 6.54e-166 479
MS.gene44556.t1 MTR_6g004610 49.893 467 225 5 39 501 1 462 2.31e-165 476
MS.gene44556.t1 MTR_1g037560 40.900 489 261 11 33 503 66 544 2.00e-126 380
MS.gene44556.t1 MTR_4g075110 38.431 510 298 9 4 502 45 549 5.71e-126 379
MS.gene44556.t1 MTR_1g037550 39.754 488 272 8 33 503 66 548 8.04e-125 376
MS.gene44556.t1 MTR_8g030590 36.253 491 284 10 31 502 30 510 6.94e-96 301
MS.gene44556.t1 MTR_4g012320 59.817 219 88 0 286 504 7 225 1.24e-95 289
MS.gene44556.t1 MTR_5g070010 34.381 509 294 9 16 502 18 508 2.17e-95 298
MS.gene44556.t1 MTR_8g098435 36.961 487 281 9 31 502 30 505 2.45e-95 298
MS.gene44556.t1 MTR_3g463060 35.464 485 282 10 31 502 36 502 3.10e-91 288
MS.gene44556.t1 MTR_1g070365 35.124 484 285 12 30 502 39 504 3.24e-83 267
MS.gene44556.t1 MTR_7g096340 34.426 488 284 18 30 503 38 503 5.67e-83 266
MS.gene44556.t1 MTR_3g080580 32.406 503 288 12 30 503 39 518 7.12e-82 264
MS.gene44556.t1 MTR_8g035860 34.369 483 295 11 31 502 38 509 4.06e-81 261
MS.gene44556.t1 MTR_7g088330 33.069 505 308 11 13 502 19 508 4.67e-81 261
MS.gene44556.t1 MTR_1g070345 33.196 485 295 13 30 503 39 505 5.00e-81 261
MS.gene44556.t1 MTR_8g035810 34.232 482 298 10 31 502 38 510 1.36e-80 260
MS.gene44556.t1 MTR_8g035820 35.073 479 289 11 35 502 42 509 1.96e-80 259
MS.gene44556.t1 MTR_7g029275 33.058 484 297 13 31 502 40 508 2.73e-80 259
MS.gene44556.t1 MTR_7g096320 35.160 438 259 13 75 503 83 504 7.21e-80 258
MS.gene44556.t1 MTR_6g084040 64.130 184 46 3 1 183 1 165 2.01e-76 238
MS.gene44556.t1 MTR_8g035780 34.091 484 289 13 35 503 43 511 4.20e-76 248
MS.gene44556.t1 MTR_5g019140 31.015 532 316 16 7 503 16 531 4.21e-75 246
MS.gene44556.t1 MTR_4g119660 30.639 532 318 15 7 503 1 516 4.60e-75 246
MS.gene44556.t1 MTR_4g054920 33.259 448 252 10 79 502 92 516 2.33e-74 244
MS.gene44556.t1 MTR_8g035760 31.723 476 304 10 35 502 49 511 1.31e-73 242
MS.gene44556.t1 MTR_8g035680 31.237 477 306 10 35 502 49 512 3.39e-73 241
MS.gene44556.t1 MTR_7g406990 36.544 353 211 8 33 377 49 396 1.69e-71 234
MS.gene44556.t1 MTR_1g060550 32.847 411 241 7 78 475 93 481 2.58e-69 231
MS.gene44556.t1 MTR_1g102220 31.042 480 303 12 35 502 43 506 1.63e-68 228
MS.gene44556.t1 MTR_2g086040 32.238 487 278 15 32 502 48 498 1.20e-67 226
MS.gene44556.t1 MTR_1g050590 88.793 116 13 0 250 365 3 118 1.30e-67 213
MS.gene44556.t1 MTR_8g035810 33.255 424 265 9 31 445 38 452 2.91e-65 218
MS.gene44556.t1 MTR_1g040110 76.577 111 26 0 126 236 57 167 4.22e-57 187
MS.gene44556.t1 MTR_8g035680 32.249 369 234 6 142 502 5 365 5.44e-57 194
MS.gene44556.t1 MTR_1g036140 87.234 94 12 0 252 345 69 162 2.80e-49 167
MS.gene44556.t1 MTR_1g036140 80.882 68 13 0 1 68 1 68 1.62e-33 125
MS.gene44556.t1 MTR_8g035810 31.638 354 225 8 31 375 38 383 2.60e-45 164
MS.gene44556.t1 MTR_1g070370 37.255 255 140 6 169 420 5 242 7.10e-42 150
MS.gene44556.t1 MTR_1g102210 31.503 346 191 10 168 502 51 361 1.34e-39 147
MS.gene44556.t1 MTR_7g079440 25.738 474 288 20 53 502 215 648 3.16e-30 125
MS.gene44556.t1 MTR_1g035660 51.327 113 39 3 161 273 21 117 2.34e-27 107
MS.gene44556.t1 MTR_5g009110 22.763 514 334 17 37 503 74 571 1.28e-26 114
MS.gene44556.t1 MTR_3g093530 25.243 412 282 11 96 501 132 523 1.60e-26 113
MS.gene44556.t1 MTR_1g062190 22.174 460 320 13 57 502 104 539 6.18e-24 105
MS.gene44556.t1 MTR_0025s0110 22.678 463 318 15 48 499 90 523 2.42e-23 103
MS.gene44556.t1 MTR_7g079440 26.410 390 235 17 53 425 215 569 3.18e-23 103
MS.gene44556.t1 MTR_1g101040 22.658 459 321 14 48 499 81 512 6.28e-23 102
MS.gene44556.t1 MTR_6g072490 23.707 464 310 16 48 499 79 510 1.23e-22 101
MS.gene44556.t1 MTR_6g017325 23.858 394 268 11 109 497 136 502 1.55e-22 100
MS.gene44556.t1 MTR_7g006900 22.864 398 267 12 109 497 101 467 6.76e-22 99.0
MS.gene44556.t1 MTR_1g101050 22.658 459 321 14 48 499 77 508 3.83e-21 97.1
MS.gene44556.t1 MTR_0147s0030 22.198 464 323 15 51 501 92 530 6.52e-21 96.3
MS.gene44556.t1 MTR_1g085680 23.111 450 286 15 71 497 99 511 2.36e-20 94.4
MS.gene44556.t1 MTR_8g035790 45.455 99 52 2 406 503 1 98 2.67e-20 86.3
MS.gene44556.t1 MTR_2g062670 28.516 256 136 7 101 347 18 235 4.05e-20 93.6
MS.gene44556.t1 MTR_2g062670 31.111 180 74 4 168 347 283 412 4.36e-16 81.3
MS.gene44556.t1 MTR_5g009110 22.477 436 283 15 110 503 1 423 4.26e-20 93.2
MS.gene44556.t1 MTR_2g072270 23.011 465 293 17 56 497 96 518 1.41e-19 92.0
MS.gene44556.t1 MTR_0181s0030 23.935 493 334 15 1 475 1 470 1.87e-19 91.7
MS.gene44556.t1 MTR_8g042000 23.840 474 300 18 48 501 91 523 5.13e-19 90.5
MS.gene44556.t1 MTR_2g023680 22.149 456 291 13 71 501 101 517 6.56e-19 90.1
MS.gene44556.t1 MTR_6g008500 23.188 483 311 21 30 473 40 501 7.61e-19 90.1
MS.gene44556.t1 MTR_8g046580 43.299 97 54 1 381 477 197 292 1.36e-18 87.0
MS.gene44556.t1 MTR_8g012585 26.693 251 164 6 239 481 188 426 1.55e-18 88.6
MS.gene44556.t1 MTR_2g061200 24.528 424 285 12 96 501 122 528 1.78e-18 88.6
MS.gene44556.t1 MTR_8g008530 22.222 477 310 15 47 501 81 518 3.49e-18 87.8
MS.gene44556.t1 MTR_6g008650 23.274 507 333 18 15 489 25 507 1.39e-17 85.9
MS.gene44556.t1 MTR_6g008430 24.658 292 206 8 198 481 207 492 2.00e-17 85.5
MS.gene44556.t1 MTR_1g022040 21.659 434 305 13 70 497 94 498 2.12e-17 85.1
MS.gene44556.t1 MTR_2g010250 32.381 210 136 5 298 502 297 505 2.15e-17 85.1
MS.gene44556.t1 MTR_2g061750 29.500 200 105 7 70 247 9 194 2.88e-17 80.9
MS.gene44556.t1 MTR_8g098565 29.902 204 136 4 305 502 304 506 3.22e-17 84.7
MS.gene44556.t1 MTR_4g018800 22.881 472 306 18 34 473 46 491 4.34e-17 84.3
MS.gene44556.t1 MTR_2g061740 29.688 192 101 6 78 247 15 194 4.48e-17 80.1
MS.gene44556.t1 MTR_6g008530 25.000 244 171 5 237 473 257 495 7.65e-17 83.6
MS.gene44556.t1 MTR_2g010320 24.650 357 248 11 157 502 157 503 9.05e-17 83.2
MS.gene44556.t1 MTR_8g042020 25.000 288 176 10 234 501 255 522 1.37e-16 82.8
MS.gene44556.t1 MTR_4g104610 21.399 486 343 17 3 472 4 466 2.51e-16 82.0
MS.gene44556.t1 MTR_7g079440 25.763 295 184 12 53 335 215 486 4.18e-16 81.3
MS.gene44556.t1 MTR_2g010290 29.150 247 159 7 271 502 287 532 4.92e-16 81.3
MS.gene44556.t1 MTR_2g010330 30.631 222 137 7 293 502 291 507 7.90e-16 80.5
MS.gene44556.t1 MTR_4g071710 27.820 266 165 8 233 478 226 484 8.13e-16 80.5
MS.gene44556.t1 MTR_8g042060 21.508 451 300 15 71 501 107 523 1.43e-15 79.7
MS.gene44556.t1 MTR_6g042540 20.388 515 340 15 6 481 9 492 1.45e-15 79.7
MS.gene44556.t1 MTR_0171s0030 26.271 354 234 13 154 495 72 410 1.63e-15 79.0
MS.gene44556.t1 MTR_4g089055 24.548 387 258 13 104 478 122 486 1.65e-15 79.3
MS.gene44556.t1 MTR_1g015860 21.533 548 346 20 3 503 19 529 2.10e-15 79.3
MS.gene44556.t1 MTR_1g091003 24.510 408 251 16 80 471 93 459 2.38e-15 79.0
MS.gene44556.t1 MTR_2g010380 29.208 202 138 4 305 502 309 509 4.22e-15 78.2
MS.gene44556.t1 MTR_3g104560 26.838 272 177 9 241 503 144 402 6.32e-15 77.0
MS.gene44556.t1 MTR_2g072400 20.886 474 321 16 45 501 79 515 6.36e-15 77.8
MS.gene44556.t1 MTR_8g012590 22.887 284 202 7 222 501 217 487 8.12e-15 77.4
MS.gene44556.t1 MTR_8g042060 24.221 289 188 9 227 501 216 487 8.58e-15 77.0
MS.gene44556.t1 MTR_5g070920 24.900 249 173 5 233 472 225 468 9.62e-15 77.0
MS.gene44556.t1 MTR_3g104560 26.838 272 177 9 241 503 279 537 1.16e-14 77.0
MS.gene44556.t1 MTR_2g072340 21.053 456 317 15 59 501 90 515 1.17e-14 76.6
MS.gene44556.t1 MTR_0171s0020 25.000 256 179 6 227 475 227 476 1.20e-14 76.6
MS.gene44556.t1 MTR_2g010280 30.952 210 139 5 298 502 295 503 1.25e-14 76.6
MS.gene44556.t1 MTR_5g070690 27.530 247 158 5 237 472 231 467 1.41e-14 76.6
MS.gene44556.t1 MTR_5g070800 27.530 247 158 5 237 472 231 467 1.41e-14 76.6
MS.gene44556.t1 MTR_4g113650 21.702 470 318 15 43 497 80 514 1.57e-14 76.3
MS.gene44556.t1 MTR_4g088400 25.794 252 178 6 232 481 250 494 1.81e-14 76.3
MS.gene44556.t1 MTR_0171s0010 26.331 338 212 12 155 475 161 478 1.89e-14 76.3
MS.gene44556.t1 MTR_6g042610 23.735 257 185 6 232 481 241 493 2.64e-14 75.9
MS.gene44556.t1 MTR_0022s0290 23.901 364 251 12 120 471 131 480 2.84e-14 75.5
MS.gene44556.t1 MTR_4g088420 30.102 196 130 5 288 481 16 206 3.05e-14 72.8
MS.gene44556.t1 MTR_4g104660 22.669 472 302 18 31 477 50 483 3.20e-14 75.5
MS.gene44556.t1 MTR_4g088425 27.381 252 175 6 232 481 233 478 3.26e-14 75.5
MS.gene44556.t1 MTR_7g087520 23.922 464 296 20 31 467 41 474 7.83e-14 74.3
MS.gene44556.t1 MTR_7g103450 26.378 254 168 5 224 471 241 481 7.93e-14 74.3
MS.gene44556.t1 MTR_7g098550 22.467 454 284 14 61 497 90 492 8.94e-14 73.9
MS.gene44556.t1 MTR_8g104030 27.459 244 155 8 237 468 8 241 1.24e-13 71.6
MS.gene44556.t1 MTR_6g084770 25.200 250 161 8 237 472 233 470 1.73e-13 73.2
MS.gene44556.t1 MTR_5g095230 20.601 466 319 17 53 501 82 513 2.01e-13 72.8
MS.gene44556.t1 MTR_7g098550 22.991 448 297 13 61 497 90 500 2.17e-13 72.8
MS.gene44556.t1 MTR_5g034900 25.373 201 145 4 305 502 319 517 2.77e-13 72.4
MS.gene44556.t1 MTR_8g027040 27.184 206 141 5 302 502 344 545 3.53e-13 72.4
MS.gene44556.t1 MTR_7g075610 23.218 491 323 19 11 478 15 474 4.48e-13 71.6
MS.gene44556.t1 MTR_4g094775 22.678 463 315 17 31 481 36 467 5.76e-13 71.2
MS.gene44556.t1 MTR_5g095260 23.656 372 236 16 122 478 134 472 6.77e-13 71.2
MS.gene44556.t1 MTR_5g021390 25.984 254 169 8 237 478 238 484 7.26e-13 71.2
MS.gene44556.t1 MTR_7g056103 23.237 482 296 21 31 478 38 479 7.64e-13 71.2
MS.gene44556.t1 MTR_8g076290 23.768 345 228 14 122 452 127 450 7.91e-13 70.9
MS.gene44556.t1 MTR_6g004570 38.095 105 52 4 242 333 1 105 9.21e-13 68.6
MS.gene44556.t1 MTR_7g092600 21.472 326 213 8 172 481 188 486 9.67e-13 70.9
MS.gene44556.t1 MTR_8g469300 23.235 340 213 13 155 472 159 472 1.00e-12 70.9
MS.gene44556.t1 MTR_2g072380 22.767 347 233 11 167 501 27 350 1.07e-12 69.7
MS.gene44556.t1 MTR_2g065360 22.973 370 241 14 122 475 99 440 1.09e-12 70.5
MS.gene44556.t1 MTR_2g072380 22.767 347 233 11 167 501 167 490 1.37e-12 70.1
MS.gene44556.t1 MTR_1g103670 22.039 363 249 12 119 471 123 461 1.56e-12 70.1
MS.gene44556.t1 MTR_2g450040 20.463 518 348 20 6 489 11 498 1.66e-12 70.1
MS.gene44556.t1 MTR_6g084090 67.500 40 13 0 282 321 11 50 2.06e-12 62.4
MS.gene44556.t1 MTR_8g036185 26.147 218 146 5 269 477 277 488 2.22e-12 69.7
MS.gene44556.t1 MTR_4g089020 23.929 397 259 13 122 501 122 492 2.36e-12 69.3
MS.gene44556.t1 MTR_5g070830 23.922 255 167 7 233 471 335 578 2.36e-12 69.7
MS.gene44556.t1 MTR_1g492820 21.298 493 341 17 31 502 49 515 2.43e-12 69.7
MS.gene44556.t1 MTR_7g012330 21.814 463 317 16 31 478 38 470 3.46e-12 68.9
MS.gene44556.t1 MTR_3g076530 23.151 311 214 10 168 471 175 467 3.92e-12 68.9
MS.gene44556.t1 MTR_6g084060 71.429 35 10 0 59 93 19 53 3.94e-12 61.6
MS.gene44556.t1 MTR_1g069200 23.697 211 154 3 290 500 307 510 3.98e-12 68.9
MS.gene44556.t1 MTR_3g025260 23.488 281 196 10 205 478 209 477 4.02e-12 68.9
MS.gene44556.t1 MTR_5g026520 25.517 290 191 9 230 502 227 508 4.04e-12 68.9
MS.gene44556.t1 MTR_1g031700 20.833 360 257 10 119 471 123 461 5.56e-12 68.2
MS.gene44556.t1 MTR_1g107295 24.766 214 142 6 273 478 283 485 6.26e-12 68.2
MS.gene44556.t1 MTR_5g073320 20.614 456 329 13 31 478 42 472 6.40e-12 68.2
MS.gene44556.t1 MTR_3g024520 23.765 324 219 13 168 478 169 477 6.93e-12 68.2
MS.gene44556.t1 MTR_2g010300 28.372 215 126 7 298 503 295 490 7.29e-12 67.8
MS.gene44556.t1 MTR_5g070840 28.671 143 97 2 332 472 1 140 7.45e-12 64.3
MS.gene44556.t1 MTR_4g077210 25.551 227 157 8 232 456 235 451 1.02e-11 67.4
MS.gene44556.t1 MTR_2g072310 22.420 281 196 7 232 501 81 350 1.04e-11 66.6
MS.gene44556.t1 MTR_5g095290 23.514 370 238 17 122 478 134 471 1.06e-11 67.4
MS.gene44556.t1 MTR_5g070700 23.827 277 189 8 233 497 225 491 1.10e-11 67.4
MS.gene44556.t1 MTR_4g088405 31.282 195 128 4 288 481 219 408 1.48e-11 66.6
MS.gene44556.t1 MTR_6g084900 23.529 238 161 6 242 468 1 228 1.78e-11 65.1
MS.gene44556.t1 MTR_5g007460 22.897 214 157 4 262 475 239 444 1.83e-11 66.6
MS.gene44556.t1 MTR_5g018500 25.926 162 113 4 314 473 4 160 2.16e-11 63.5
MS.gene44556.t1 MTR_2g072250 20.382 471 314 16 53 501 82 513 2.63e-11 66.2
MS.gene44556.t1 MTR_2g072260 19.958 476 329 18 46 501 67 510 3.47e-11 65.9
MS.gene44556.t1 MTR_3g025230 22.727 374 252 16 122 478 124 477 4.12e-11 65.5
MS.gene44556.t1 MTR_3g076560 22.368 304 215 8 168 468 191 476 4.19e-11 65.5
MS.gene44556.t1 MTR_3g436390 24.911 281 192 11 233 504 231 501 4.61e-11 65.5
MS.gene44556.t1 MTR_5g007450 23.902 205 149 4 274 478 271 468 5.02e-11 65.5
MS.gene44556.t1 MTR_0059s0170 24.895 474 289 23 31 478 41 473 5.37e-11 65.1
MS.gene44556.t1 MTR_4g088160 21.123 374 248 13 122 475 128 474 8.55e-11 64.7
MS.gene44556.t1 MTR_4g088195 20.370 378 254 11 122 479 128 478 9.25e-11 64.7
MS.gene44556.t1 MTR_4g109470 26.953 256 145 11 232 467 230 463 9.55e-11 64.3
MS.gene44556.t1 MTR_2g073480 24.786 234 158 6 249 478 165 384 9.75e-11 63.9
MS.gene44556.t1 MTR_1g037370 23.548 310 222 8 119 427 120 415 9.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44556.t1 AT4G32170 43.640 511 273 6 1 503 1 504 1.08e-150 440
MS.gene44556.t1 AT4G39500 42.495 513 277 5 2 503 12 517 2.88e-148 434
MS.gene44556.t1 AT4G39490 40.900 511 282 5 11 504 11 518 3.70e-143 421
MS.gene44556.t1 AT2G23180 40.310 516 290 6 1 502 1 512 7.09e-142 418
MS.gene44556.t1 AT4G39500 43.038 474 254 4 39 503 1 467 9.73e-141 414
MS.gene44556.t1 AT2G21910 41.020 490 274 5 24 504 25 508 3.56e-137 406
MS.gene44556.t1 AT4G39480 40.698 516 290 5 1 504 4 515 5.30e-133 395
MS.gene44556.t1 AT1G57750 38.431 510 294 5 1 503 1 497 1.06e-132 394
MS.gene44556.t1 AT1G47620 38.506 522 296 6 1 503 1 516 2.60e-131 391
MS.gene44556.t1 AT4G39510 39.494 514 292 7 1 503 1 506 2.23e-129 386
MS.gene44556.t1 AT5G08250 37.282 515 300 10 4 504 37 542 1.05e-120 365
MS.gene44556.t1 AT5G52320 38.703 478 274 6 32 501 35 501 1.64e-120 363
MS.gene44556.t1 AT5G02900 39.382 518 261 12 1 503 1 480 2.78e-120 362
MS.gene44556.t1 AT5G23190 36.257 513 309 8 4 504 36 542 4.47e-119 361
MS.gene44556.t1 AT1G65340 37.526 477 280 5 33 501 36 502 7.92e-119 358
MS.gene44556.t1 AT5G52320 38.478 473 272 6 32 496 35 496 2.46e-118 357
MS.gene44556.t1 AT5G08250 37.938 485 279 9 34 504 4 480 8.61e-116 350
MS.gene44556.t1 AT1G24540 37.137 482 289 5 31 502 43 520 3.63e-113 345
MS.gene44556.t1 AT1G63710 37.132 509 299 10 8 502 6 507 1.39e-104 323
MS.gene44556.t1 AT4G00360 36.328 512 298 10 10 502 9 511 8.99e-102 316
MS.gene44556.t1 AT1G57750 36.156 437 259 5 1 430 1 424 2.24e-101 311
MS.gene44556.t1 AT3G26125 34.280 493 301 7 31 504 46 534 2.65e-101 315
MS.gene44556.t1 AT2G45970 36.511 493 280 10 31 502 30 510 2.69e-101 315
MS.gene44556.t1 AT1G01600 35.283 513 304 10 10 502 9 513 4.85e-98 306
MS.gene44556.t1 AT1G13140 31.907 514 329 8 6 504 19 526 9.11e-94 295
MS.gene44556.t1 AT1G13150 33.470 487 305 7 31 504 39 519 2.28e-92 291
MS.gene44556.t1 AT5G58860 34.118 510 310 8 8 502 10 508 5.28e-91 287
MS.gene44556.t1 AT1G13140 31.238 509 313 9 6 504 19 500 2.31e-88 280
MS.gene44556.t1 AT1G34540 33.268 514 304 14 11 502 1 497 1.41e-85 273
MS.gene44556.t1 AT2G45510 33.849 517 304 13 1 495 1 501 1.05e-83 268
MS.gene44556.t1 AT3G56630 33.878 490 300 12 23 502 23 498 1.48e-83 267
MS.gene44556.t1 AT2G44890 33.792 509 309 12 1 495 7 501 9.36e-82 263
MS.gene44556.t1 AT5G63450 31.683 505 320 10 7 502 14 502 4.90e-79 256
MS.gene44556.t1 AT5G63450 31.683 505 320 10 7 502 72 560 2.61e-78 256
MS.gene44556.t1 AT3G48520 31.890 508 312 12 10 503 13 500 4.81e-78 253
MS.gene44556.t1 AT2G27690 34.038 426 261 9 78 500 76 484 8.93e-78 252
MS.gene44556.t1 AT2G44890 32.677 508 298 12 1 495 7 483 6.84e-76 247
MS.gene44556.t1 AT3G01900 32.311 489 286 17 30 502 31 490 3.11e-72 238
MS.gene44556.t1 AT1G69500 29.740 538 329 11 1 503 1 524 7.03e-72 238
MS.gene44556.t1 AT1G31800 25.364 481 305 18 44 503 123 570 1.51e-30 125
MS.gene44556.t1 AT3G53130 23.261 460 315 14 57 502 104 539 1.15e-27 116
MS.gene44556.t1 AT5G24900 22.532 466 323 13 51 499 80 524 1.68e-22 101
MS.gene44556.t1 AT1G66030 29.586 169 103 3 1 160 1 162 7.86e-22 92.8
MS.gene44556.t1 AT5G24900 22.717 427 296 12 86 499 2 407 1.05e-21 97.8
MS.gene44556.t1 AT2G26710 24.565 460 312 16 43 497 81 510 4.27e-21 96.7
MS.gene44556.t1 AT4G15110 22.222 486 321 15 60 503 109 579 1.13e-20 95.9
MS.gene44556.t1 AT5G52400 23.256 430 300 12 71 495 108 512 3.72e-20 94.0
MS.gene44556.t1 AT3G14680 22.538 457 309 15 57 501 88 511 4.69e-20 93.6
MS.gene44556.t1 AT5G24910 22.803 478 313 20 48 502 88 532 2.74e-19 91.3
MS.gene44556.t1 AT3G14640 22.246 463 305 16 57 501 88 513 3.55e-19 90.9
MS.gene44556.t1 AT3G14640 22.246 463 305 16 57 501 110 535 4.42e-19 90.9
MS.gene44556.t1 AT3G14650 22.717 449 312 16 53 494 84 504 7.11e-19 90.1
MS.gene44556.t1 AT5G51900 36.306 157 78 6 218 356 1 153 4.31e-18 84.3
MS.gene44556.t1 AT2G24180 26.126 333 227 11 168 495 173 491 6.08e-18 87.0
MS.gene44556.t1 AT4G27710 23.179 453 306 13 57 497 90 512 7.86e-18 86.7
MS.gene44556.t1 AT3G25180 25.172 290 185 7 201 481 217 483 8.36e-18 86.7
MS.gene44556.t1 AT4G13310 22.865 363 244 13 122 472 124 462 1.06e-17 86.3
MS.gene44556.t1 AT2G45580 26.957 345 226 12 144 478 151 479 1.28e-17 86.3
MS.gene44556.t1 AT2G45580 27.566 341 220 13 148 478 2 325 1.57e-17 84.7
MS.gene44556.t1 AT3G14660 23.226 465 304 18 53 501 84 511 1.59e-17 85.9
MS.gene44556.t1 AT5G38450 21.598 463 320 13 51 497 76 511 4.94e-17 84.3
MS.gene44556.t1 AT4G13290 23.901 364 231 13 122 472 125 455 1.23e-16 82.8
MS.gene44556.t1 AT4G13770 21.150 487 355 12 2 478 3 470 1.41e-16 82.8
MS.gene44556.t1 AT3G14690 22.101 457 307 17 59 501 125 546 1.42e-16 82.8
MS.gene44556.t1 AT3G14690 22.101 457 307 17 59 501 90 511 1.67e-16 82.4
MS.gene44556.t1 AT3G48270 21.795 390 247 11 89 471 114 452 1.91e-16 82.4
MS.gene44556.t1 AT5G35715 24.251 334 227 9 139 462 74 391 9.20e-16 80.1
MS.gene44556.t1 AT3G26830 24.458 323 225 8 152 468 149 458 1.07e-15 80.1
MS.gene44556.t1 AT3G14630 22.056 467 307 16 53 501 80 507 1.22e-15 79.7
MS.gene44556.t1 AT4G31950 24.514 257 181 6 233 481 231 482 1.34e-15 79.7
MS.gene44556.t1 AT3G48300 20.723 415 276 10 88 497 111 477 1.55e-15 79.3
MS.gene44556.t1 AT3G48300 20.723 415 276 10 88 497 113 479 1.56e-15 79.3
MS.gene44556.t1 AT5G24950 21.489 470 309 16 26 472 29 461 1.72e-15 79.3
MS.gene44556.t1 AT1G64940 26.400 250 170 7 263 502 263 508 1.98e-15 79.3
MS.gene44556.t1 AT1G01280 24.163 418 278 20 74 472 73 470 2.27e-15 79.0
MS.gene44556.t1 AT2G42250 23.708 329 229 9 162 481 172 487 2.32e-15 79.0
MS.gene44556.t1 AT1G64950 25.926 270 176 6 236 502 259 507 3.21e-15 78.6
MS.gene44556.t1 AT3G14630 22.174 460 301 16 53 494 135 555 3.47e-15 78.6
MS.gene44556.t1 AT4G31940 21.600 500 350 13 10 481 9 494 4.08e-15 78.2
MS.gene44556.t1 AT3G03470 27.948 229 155 5 282 502 283 509 2.11e-14 75.9
MS.gene44556.t1 AT5G06900 22.868 258 180 5 223 475 222 465 3.13e-14 75.5
MS.gene44556.t1 AT5G07990 23.366 505 321 25 10 484 9 477 3.86e-14 75.1
MS.gene44556.t1 AT2G46950 21.019 471 315 13 49 497 130 565 5.73e-14 74.7
MS.gene44556.t1 AT3G14660 25.092 271 179 9 240 501 110 365 9.06e-14 73.2
MS.gene44556.t1 AT1G33720 25.937 347 219 13 146 478 24 346 1.07e-13 73.2
MS.gene44556.t1 AT1G33720 25.937 347 219 13 146 478 24 346 1.07e-13 73.2
MS.gene44556.t1 AT1G33720 25.937 347 219 13 146 478 24 346 1.07e-13 73.2
MS.gene44556.t1 AT1G33720 25.937 347 219 13 146 478 156 478 1.07e-13 73.9
MS.gene44556.t1 AT3G32047 23.153 406 248 14 61 458 110 459 1.98e-13 72.8
MS.gene44556.t1 AT1G67110 24.010 404 264 14 104 497 135 505 2.12e-13 72.8
MS.gene44556.t1 AT5G05260 22.366 465 317 16 31 471 44 488 2.40e-13 72.8
MS.gene44556.t1 AT3G26320 24.119 369 245 16 122 478 123 468 4.29e-13 72.0
MS.gene44556.t1 AT2G12190 25.000 268 175 7 235 497 258 504 7.17e-13 71.2
MS.gene44556.t1 AT2G30770 23.767 223 163 3 259 478 249 467 7.30e-13 71.2
MS.gene44556.t1 AT1G01190 27.848 237 154 9 275 502 308 536 9.20e-13 70.9
MS.gene44556.t1 AT1G01190 28.571 238 151 10 275 502 303 531 1.05e-12 70.9
MS.gene44556.t1 AT2G27000 22.846 267 182 8 250 504 254 508 1.31e-12 70.5
MS.gene44556.t1 AT1G64900 25.794 252 172 6 263 503 258 505 1.41e-12 70.5
MS.gene44556.t1 AT3G48280 21.000 400 259 12 85 477 109 458 1.44e-12 70.1
MS.gene44556.t1 AT2G45550 24.269 342 231 9 146 478 156 478 2.15e-12 69.7
MS.gene44556.t1 AT5G47990 22.319 345 229 11 168 496 180 501 3.03e-12 69.3
MS.gene44556.t1 AT3G48310 20.663 392 275 12 94 477 96 459 3.14e-12 69.3
MS.gene44556.t1 AT4G12310 21.887 265 196 5 237 495 246 505 3.88e-12 68.9
MS.gene44556.t1 AT3G14620 21.348 445 312 14 58 494 93 507 3.91e-12 68.9
MS.gene44556.t1 AT1G74110 21.670 503 330 20 31 502 67 536 4.30e-12 68.9
MS.gene44556.t1 AT3G20100 27.074 229 132 8 239 458 260 462 5.69e-12 68.6
MS.gene44556.t1 AT3G20120 26.364 220 140 7 250 458 253 461 5.96e-12 68.2
MS.gene44556.t1 AT3G20120 26.364 220 140 7 250 458 117 325 5.99e-12 67.8
MS.gene44556.t1 AT3G20120 26.364 220 140 7 250 458 117 325 5.99e-12 67.8
MS.gene44556.t1 AT3G20120 26.364 220 140 7 250 458 117 325 5.99e-12 67.8
MS.gene44556.t1 AT3G61880 23.413 252 166 8 233 472 260 496 6.29e-12 68.2
MS.gene44556.t1 AT1G13110 20.506 356 259 10 122 468 124 464 6.60e-12 68.2
MS.gene44556.t1 AT3G26310 24.107 336 220 12 157 478 153 467 7.47e-12 68.2
MS.gene44556.t1 AT4G12300 20.085 473 345 14 31 492 46 496 8.50e-12 67.8
MS.gene44556.t1 AT3G61880 23.413 252 166 8 233 472 260 496 8.63e-12 67.8
MS.gene44556.t1 AT1G16410 21.186 472 323 17 31 475 49 498 1.02e-11 67.8
MS.gene44556.t1 AT5G04330 24.314 255 170 6 237 478 231 475 1.26e-11 67.4
MS.gene44556.t1 AT3G26300 26.100 341 213 15 157 481 154 471 1.85e-11 66.6
MS.gene44556.t1 AT5G25180 21.311 427 286 15 72 478 68 464 3.28e-11 65.9
MS.gene44556.t1 AT1G79370 20.000 475 342 13 23 471 36 498 4.27e-11 65.9
MS.gene44556.t1 AT2G46660 25.604 207 143 6 302 502 327 528 4.54e-11 65.5
MS.gene44556.t1 AT4G37340 26.860 242 152 8 236 472 235 456 4.61e-11 65.5
MS.gene44556.t1 AT4G15380 24.051 237 158 7 272 497 274 499 5.15e-11 65.5
MS.gene44556.t1 AT3G20950 20.783 332 220 9 138 460 171 468 5.33e-11 65.5
MS.gene44556.t1 AT4G37370 26.522 230 153 7 239 468 238 451 5.92e-11 65.1
MS.gene44556.t1 AT3G20130 24.903 257 169 9 253 497 231 475 5.95e-11 65.1
MS.gene44556.t1 AT3G20130 24.903 257 169 9 253 497 259 503 6.51e-11 65.1
MS.gene44556.t1 AT2G45560 25.664 226 144 6 263 478 267 478 7.45e-11 64.7
MS.gene44556.t1 AT1G50520 23.349 424 259 17 90 496 130 504 8.80e-11 64.7
MS.gene44556.t1 AT4G37400 22.515 342 247 8 163 503 162 486 9.42e-11 64.7

Find 114 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTCTTGAATGATTT+TGG 0.145864 1.4:+20726374 None:intergenic
TCCATGATGTTTCATGAAAA+AGG 0.177494 1.4:+20727196 None:intergenic
CACATTGCAAGCAAGAATTT+TGG 0.184244 1.4:-20727098 MS.gene44556:CDS
CCAATTATTGGCCAATTAAT+TGG 0.193507 1.4:+20727269 None:intergenic
TCACATGAAACATGGTTTAA+AGG 0.200981 1.4:-20725893 MS.gene44556:CDS
ATGAATTTGTACCAATTAAT+TGG 0.203126 1.4:-20727280 MS.gene44556:CDS
CCAATTAATTGGCCAATAAT+TGG 0.220322 1.4:-20727269 MS.gene44556:CDS
GAGTATAATAACCTTGTATT+TGG 0.237092 1.4:+20726177 None:intergenic
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.4:-20726143 MS.gene44556:CDS
GGTTACATAATCATGGAAAT+TGG 0.258555 1.4:+20727217 None:intergenic
AAAGAAAGCTTCGGGGTTAC+AGG 0.270723 1.4:+20725922 None:intergenic
TTCAAGAAATCAAAGATAAC+TGG 0.280108 1.4:-20726365 MS.gene44556:CDS
CTTAGCTCATTAAACTTGTT+TGG 0.294588 1.4:+20726777 None:intergenic
ACCACCTTTATGTGAAATTT+CGG 0.304852 1.4:+20725955 None:intergenic
TAGCTTCATTCAAATGAAAA+TGG 0.313468 1.4:-20725995 MS.gene44556:CDS
GCCGGTAGCATACCAATTAT+TGG 0.316662 1.4:+20727257 None:intergenic
AACTTGTTTGGAAGGCAATT+AGG 0.324390 1.4:+20726789 None:intergenic
AGCATCTGCACTATTACATT+TGG 0.331822 1.4:-20726819 MS.gene44556:CDS
GTTACCGAAATTTCACATAA+AGG 0.334159 1.4:-20725959 MS.gene44556:CDS
GCACTTGCTTTGCTCTTGCT+TGG 0.351078 1.4:+20726581 None:intergenic
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.4:-20726698 MS.gene44556:CDS
GCAATGTGATCAACATTCAT+TGG 0.373065 1.4:+20727113 None:intergenic
AAGTTCATTGCTTTCAATAC+AGG 0.381728 1.4:-20726045 MS.gene44556:CDS
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.4:-20726142 MS.gene44556:CDS
CTCTATTGCGTCTCCAATAG+TGG 0.386849 1.4:+20727303 None:intergenic
TCTTCCTATACATCCACTAT+TGG 0.389329 1.4:-20727316 MS.gene44556:CDS
GGAAATGGCCCGGTTACTTC+AGG 0.390271 1.4:-20726444 MS.gene44556:CDS
GTGCAGCAGCAGTGAAGATA+TGG 0.395612 1.4:-20726562 MS.gene44556:CDS
ATTATCACCTCATCTATAAC+AGG 0.399453 1.4:+20726729 None:intergenic
ATTATACTCTTTGTACGCTA+TGG 0.402063 1.4:-20726163 MS.gene44556:CDS
TCCTTACCCATACAACTTCC+AGG 0.412185 1.4:+20726021 None:intergenic
TGTTTCATTCATTTCTCAAA+AGG 0.413955 1.4:-20726977 MS.gene44556:CDS
GAAGAACAAAAGAAAGCTTC+GGG 0.416262 1.4:+20725914 None:intergenic
TTGTTTCCATACGTGCGAAT+TGG 0.418938 1.4:+20727010 None:intergenic
TACAGGACCTGGAAGTTGTA+TGG 0.420343 1.4:-20726028 MS.gene44556:CDS
GGAGGAACGTTTCGATTTGA+AGG 0.423047 1.4:-20727176 MS.gene44556:CDS
TAGATGAGGTGATAATTTAC+CGG 0.429693 1.4:-20726722 MS.gene44556:CDS
CTCTCCACTAGGTAGTATAT+CGG 0.434770 1.4:+20726209 None:intergenic
AGTGGATGTATAGGAAGATT+AGG 0.434953 1.4:+20727321 None:intergenic
TGAAGAACAAAAGAAAGCTT+CGG 0.442959 1.4:+20725913 None:intergenic
CAACTGAGACCTGAAGTAAC+CGG 0.449990 1.4:+20726435 None:intergenic
ATGTCAATAATTCAGTGTAT+AGG 0.451360 1.4:-20727359 MS.gene44556:CDS
ATTGCACATATATGCTCAAA+AGG 0.452980 1.4:+20726237 None:intergenic
CATCATTAAGAAATGGTAGT+AGG 0.456196 1.4:+20726901 None:intergenic
CGGTTACTTCAGGTCTCAGT+TGG 0.460067 1.4:-20726434 MS.gene44556:CDS
TAAATTCCAATTCGCACGTA+TGG 0.464729 1.4:-20727016 MS.gene44556:CDS
GCTCATTAAACTTGTTTGGA+AGG 0.466990 1.4:+20726781 None:intergenic
CTTAATGATGTATGTGAAGT+AGG 0.468376 1.4:-20726888 MS.gene44556:CDS
AACAAATATGGGGAGAAGAC+TGG 0.470442 1.4:-20726131 MS.gene44556:CDS
GCACTAATGAAGGAAGGATC+TGG 0.472945 1.4:-20726525 MS.gene44556:CDS
TCACATACATCATTAAGAAA+TGG 0.474421 1.4:+20726894 None:intergenic
ATGAAGGAAGGATCTGGAAA+GGG 0.476745 1.4:-20726519 MS.gene44556:CDS
CGTTTCGATTTGAAGGAGCT+TGG 0.477973 1.4:-20727169 MS.gene44556:CDS
ATCAACATTCATTGGATCAC+TGG 0.484285 1.4:+20727121 None:intergenic
GGCTCAACGTTGGTCAAGAA+AGG 0.490371 1.4:-20726662 MS.gene44556:CDS
AGTAGGTGCTCAGGTGGACC+TGG 0.498248 1.4:-20726871 MS.gene44556:CDS
GCCAATAATTGGTATGCTAC+CGG 0.499291 1.4:-20727258 MS.gene44556:CDS
TTATACTCTTTGTACGCTAT+GGG 0.500848 1.4:-20726162 MS.gene44556:CDS
ACCTGGAAGTTGTATGGGTA+AGG 0.503180 1.4:-20726022 MS.gene44556:CDS
TTGTTGGAAGAAGTTCTTGA+AGG 0.506172 1.4:+20726950 None:intergenic
GTCTCCAATAGTGGATGTAT+AGG 0.515307 1.4:+20727312 None:intergenic
GGAATTTAAGCCTGAGAGAT+GGG 0.521133 1.4:-20726106 MS.gene44556:CDS
CTTCCTAAAAGCACTAATGA+AGG 0.524091 1.4:-20726535 MS.gene44556:CDS
CTTTCCGATACCCATCTCTC+AGG 0.530509 1.4:+20726096 None:intergenic
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.4:-20726400 MS.gene44556:CDS
CATATATGCTCAAAAGGTAC+AGG 0.535622 1.4:+20726243 None:intergenic
GAAATTTCACATAAAGGTGG+TGG 0.536525 1.4:-20725953 MS.gene44556:CDS
TGGAATTTAAGCCTGAGAGA+TGG 0.543751 1.4:-20726107 MS.gene44556:CDS
TCAATAATTCAGTGTATAGG+AGG 0.548247 1.4:-20727356 MS.gene44556:CDS
TTGGTCAAGAAAGGAAGCTA+AGG 0.548302 1.4:-20726653 MS.gene44556:CDS
ATTGCTTTCAATACAGGACC+TGG 0.550740 1.4:-20726039 MS.gene44556:CDS
ACCTACTCAAGGCATCCTCC+AGG 0.551378 1.4:+20726853 None:intergenic
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.4:+20726703 None:intergenic
AAAGCAATGAACTTGTAAGA+TGG 0.552050 1.4:+20726054 None:intergenic
GAGAGATGGGTATCGGAAAG+AGG 0.557232 1.4:-20726093 MS.gene44556:CDS
AAGAAAGCTTCGGGGTTACA+GGG 0.558470 1.4:+20725923 None:intergenic
ACAGGACCTGGAAGTTGTAT+GGG 0.558602 1.4:-20726027 MS.gene44556:CDS
TAAGCCTGAGAGATGGGTAT+CGG 0.564864 1.4:-20726100 MS.gene44556:CDS
CTAAAAGCACTAATGAAGGA+AGG 0.565136 1.4:-20726531 MS.gene44556:CDS
ATCTCTTCCTGTTATAGATG+AGG 0.572397 1.4:-20726736 MS.gene44556:CDS
GATAGATTACGCAAAAGCGC+CGG 0.572908 1.4:+20727239 None:intergenic
AATATGGGGAGAAGACTGGC+TGG 0.578615 1.4:-20726127 MS.gene44556:CDS
GATGTATAGGAAGATTAGGA+TGG 0.580348 1.4:+20727325 None:intergenic
GAAGGAAGGATCTGGAAAGG+GGG 0.586577 1.4:-20726517 MS.gene44556:CDS
TTTGTACGCTATGGGAAGGA+TGG 0.588075 1.4:-20726154 MS.gene44556:CDS
AGTCAGATTCTCCTCTTGTG+TGG 0.592007 1.4:+20726341 None:intergenic
TGAAGGAAGGATCTGGAAAG+GGG 0.592827 1.4:-20726518 MS.gene44556:CDS
AACTGAGACCTGAAGTAACC+GGG 0.593695 1.4:+20726436 None:intergenic
AGATAACTGGGCCACACAAG+AGG 0.598238 1.4:-20726352 MS.gene44556:CDS
GGACTAACACGCTCTCCACT+AGG 0.603467 1.4:+20726198 None:intergenic
TTTCACATAAAGGTGGTGGA+AGG 0.605673 1.4:-20725949 MS.gene44556:CDS
TTTGTTCTTCACATGAAACA+TGG 0.607012 1.4:-20725901 MS.gene44556:CDS
ATCAAAAGTGAACCTACTCA+AGG 0.610670 1.4:+20726842 None:intergenic
TGTATGTGAAGTAGGTGCTC+AGG 0.611163 1.4:-20726880 MS.gene44556:CDS
TCAAGAAATCAAAGATAACT+GGG 0.612824 1.4:-20726364 MS.gene44556:CDS
ACTCTTTGTACGCTATGGGA+AGG 0.618250 1.4:-20726158 MS.gene44556:CDS
AATGAAGGAAGGATCTGGAA+AGG 0.624386 1.4:-20726520 MS.gene44556:CDS
ACCTGGAGGATGCCTTGAGT+AGG 0.627785 1.4:-20726854 MS.gene44556:CDS
TGGTCAAGAAAGGAAGCTAA+GGG 0.632333 1.4:-20726652 MS.gene44556:CDS
ACCGAAATTTCACATAAAGG+TGG 0.633013 1.4:-20725956 MS.gene44556:CDS
TCAAGATACTCATCTCTCGA+AGG 0.633356 1.4:+20726318 None:intergenic
TACAGGAGGATAAAGTCTCA+AGG 0.637791 1.4:+20726260 None:intergenic
GGAAGGATGGAACAAATATG+GGG 0.639334 1.4:-20726141 MS.gene44556:CDS
ATGTGAAGTAGGTGCTCAGG+TGG 0.640187 1.4:-20726877 MS.gene44556:CDS
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.4:+20726246 None:intergenic
AGCGTGTTAGTCCAAATACA+AGG 0.645393 1.4:-20726188 MS.gene44556:CDS
AGGTGCTCAGGTGGACCTGG+AGG 0.655414 1.4:-20726868 MS.gene44556:CDS
AAATCCGATATACTACCTAG+TGG 0.664104 1.4:-20726213 MS.gene44556:CDS
AGGCTTCACATAGAGCTCCG+TGG 0.685645 1.4:+20726280 None:intergenic
GATAAGCTAGTGTACCTCCA+CGG 0.695924 1.4:-20726297 MS.gene44556:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.4:+20726690 None:intergenic
CGCACGTATGGAAACAACAG+CGG 0.731056 1.4:-20727004 MS.gene44556:CDS
CTTCACATAGAGCTCCGTGG+AGG 0.750978 1.4:+20726283 None:intergenic
AAGAACAAAAGAAAGCTTCG+GGG 0.756350 1.4:+20725915 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAATCAAAAATATCT+TGG + chr1.4:20726178-20726197 None:intergenic 15.0%
!!! CAAGATATTTTTGATTTTTT+TGG - chr1.4:20726176-20726195 MS.gene44556:CDS 15.0%
!! ATGAATTTGTACCAATTAAT+TGG - chr1.4:20725946-20725965 MS.gene44556:CDS 20.0%
!!! GATATTTTTGATTTTTTTGG+AGG - chr1.4:20726179-20726198 MS.gene44556:CDS 20.0%
!!! TTTGATTTCTTGAATGATTT+TGG + chr1.4:20726855-20726874 None:intergenic 20.0%
! ACAAACTATGAAGAAAAAGT+TGG - chr1.4:20726295-20726314 MS.gene44556:CDS 25.0%
! ATGTCAATAATTCAGTGTAT+AGG - chr1.4:20725867-20725886 MS.gene44556:CDS 25.0%
! GAGTATAATAACCTTGTATT+TGG + chr1.4:20727052-20727071 None:intergenic 25.0%
! TAGCTTCATTCAAATGAAAA+TGG - chr1.4:20727231-20727250 MS.gene44556:CDS 25.0%
! TCAAGAAATCAAAGATAACT+GGG - chr1.4:20726862-20726881 MS.gene44556:CDS 25.0%
! TCACATACATCATTAAGAAA+TGG + chr1.4:20726335-20726354 None:intergenic 25.0%
! TGAAAAAGGTTACATAATCA+TGG + chr1.4:20726019-20726038 None:intergenic 25.0%
! TGTTTCATTCATTTCTCAAA+AGG - chr1.4:20726249-20726268 MS.gene44556:CDS 25.0%
! TTCAAGAAATCAAAGATAAC+TGG - chr1.4:20726861-20726880 MS.gene44556:CDS 25.0%
!!! ACTTTTTCTTCATAGTTTGT+TGG + chr1.4:20726295-20726314 None:intergenic 25.0%
!!! ATTTTTGATTTTTTTGGAGG+TGG - chr1.4:20726182-20726201 MS.gene44556:CDS 25.0%
AAAGCAATGAACTTGTAAGA+TGG + chr1.4:20727175-20727194 None:intergenic 30.0%
AAGTTCATTGCTTTCAATAC+AGG - chr1.4:20727181-20727200 MS.gene44556:CDS 30.0%
ACCACCTTTATGTGAAATTT+CGG + chr1.4:20727274-20727293 None:intergenic 30.0%
ATTATACTCTTTGTACGCTA+TGG - chr1.4:20727063-20727082 MS.gene44556:CDS 30.0%
ATTATCACCTCATCTATAAC+AGG + chr1.4:20726500-20726519 None:intergenic 30.0%
ATTGCACATATATGCTCAAA+AGG + chr1.4:20726992-20727011 None:intergenic 30.0%
CATCATTAAGAAATGGTAGT+AGG + chr1.4:20726328-20726347 None:intergenic 30.0%
CCAATTAATTGGCCAATAAT+TGG - chr1.4:20725957-20725976 MS.gene44556:CDS 30.0%
CCAATTATTGGCCAATTAAT+TGG + chr1.4:20725960-20725979 None:intergenic 30.0%
CTTAATGATGTATGTGAAGT+AGG - chr1.4:20726338-20726357 MS.gene44556:CDS 30.0%
GGTTACATAATCATGGAAAT+TGG + chr1.4:20726012-20726031 None:intergenic 30.0%
GTTACCGAAATTTCACATAA+AGG - chr1.4:20727267-20727286 MS.gene44556:CDS 30.0%
TAGATGAGGTGATAATTTAC+CGG - chr1.4:20726504-20726523 MS.gene44556:CDS 30.0%
TCAATAATTCAGTGTATAGG+AGG - chr1.4:20725870-20725889 MS.gene44556:CDS 30.0%
TCACATGAAACATGGTTTAA+AGG - chr1.4:20727333-20727352 MS.gene44556:CDS 30.0%
TCCATGATGTTTCATGAAAA+AGG + chr1.4:20726033-20726052 None:intergenic 30.0%
TGAAGAACAAAAGAAAGCTT+CGG + chr1.4:20727316-20727335 None:intergenic 30.0%
TTATACTCTTTGTACGCTAT+GGG - chr1.4:20727064-20727083 MS.gene44556:CDS 30.0%
TTTGTTCTTCACATGAAACA+TGG - chr1.4:20727325-20727344 MS.gene44556:CDS 30.0%
! CTTAGCTCATTAAACTTGTT+TGG + chr1.4:20726452-20726471 None:intergenic 30.0%
! GAAACTGTCAAGATTTTCTT+CGG + chr1.4:20726603-20726622 None:intergenic 30.0%
! TTTTTCATGAAACATCATGG+AGG - chr1.4:20726032-20726051 MS.gene44556:CDS 30.0%
!! ACCTTTTTCATGAAACATCA+TGG - chr1.4:20726029-20726048 MS.gene44556:CDS 30.0%
AAATCCGATATACTACCTAG+TGG - chr1.4:20727013-20727032 MS.gene44556:CDS 35.0%
AAGAACAAAAGAAAGCTTCG+GGG + chr1.4:20727314-20727333 None:intergenic 35.0%
ACCGAAATTTCACATAAAGG+TGG - chr1.4:20727270-20727289 MS.gene44556:CDS 35.0%
AGCATCTGCACTATTACATT+TGG - chr1.4:20726407-20726426 MS.gene44556:CDS 35.0%
AGTGGATGTATAGGAAGATT+AGG + chr1.4:20725908-20725927 None:intergenic 35.0%
ATCAAAAGTGAACCTACTCA+AGG + chr1.4:20726387-20726406 None:intergenic 35.0%
ATCAACATTCATTGGATCAC+TGG + chr1.4:20726108-20726127 None:intergenic 35.0%
ATCTCTTCCTGTTATAGATG+AGG - chr1.4:20726490-20726509 MS.gene44556:CDS 35.0%
GAAATTTCACATAAAGGTGG+TGG - chr1.4:20727273-20727292 MS.gene44556:CDS 35.0%
GAAGAACAAAAGAAAGCTTC+GGG + chr1.4:20727315-20727334 None:intergenic 35.0%
GATGTATAGGAAGATTAGGA+TGG + chr1.4:20725904-20725923 None:intergenic 35.0%
GCAATGTGATCAACATTCAT+TGG + chr1.4:20726116-20726135 None:intergenic 35.0%
TAAATTCCAATTCGCACGTA+TGG - chr1.4:20726210-20726229 MS.gene44556:CDS 35.0%
TCTTCCTATACATCCACTAT+TGG - chr1.4:20725910-20725929 MS.gene44556:CDS 35.0%
TGTTTCAACTCATCCTATTG+TGG - chr1.4:20726826-20726845 MS.gene44556:CDS 35.0%
TTGTTGGAAGAAGTTCTTGA+AGG + chr1.4:20726279-20726298 None:intergenic 35.0%
! AACTTGTTTGGAAGGCAATT+AGG + chr1.4:20726440-20726459 None:intergenic 35.0%
! CACATTGCAAGCAAGAATTT+TGG - chr1.4:20726128-20726147 MS.gene44556:CDS 35.0%
! CATATATGCTCAAAAGGTAC+AGG + chr1.4:20726986-20727005 None:intergenic 35.0%
! CTTCCTTCATTAGTGCTTTT+AGG + chr1.4:20726697-20726716 None:intergenic 35.0%
! GCTCATTAAACTTGTTTGGA+AGG + chr1.4:20726448-20726467 None:intergenic 35.0%
!! AGCAAGAATTTTGGCAACTA+CGG - chr1.4:20726137-20726156 MS.gene44556:CDS 35.0%
!! CTAAAAGCACTAATGAAGGA+AGG - chr1.4:20726695-20726714 MS.gene44556:CDS 35.0%
!! CTTCCTAAAAGCACTAATGA+AGG - chr1.4:20726691-20726710 MS.gene44556:CDS 35.0%
!! TCTCTCTTTTTAGCAGGAAA+TGG - chr1.4:20726767-20726786 MS.gene44556:CDS 35.0%
!!! ATGATTTTGGCTTCCACAAT+AGG + chr1.4:20726842-20726861 None:intergenic 35.0%
AACAAATATGGGGAGAAGAC+TGG - chr1.4:20727095-20727114 MS.gene44556:CDS 40.0%
AATGAAGGAAGGATCTGGAA+AGG - chr1.4:20726706-20726725 MS.gene44556:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG - chr1.4:20726528-20726547 MS.gene44556:CDS 40.0%
AGCGTGTTAGTCCAAATACA+AGG - chr1.4:20727038-20727057 MS.gene44556:CDS 40.0%
ATGAAGGAAGGATCTGGAAA+GGG - chr1.4:20726707-20726726 MS.gene44556:CDS 40.0%
ATTGCTTTCAATACAGGACC+TGG - chr1.4:20727187-20727206 MS.gene44556:CDS 40.0%
CTCTCCACTAGGTAGTATAT+CGG + chr1.4:20727020-20727039 None:intergenic 40.0%
GCCAATAATTGGTATGCTAC+CGG - chr1.4:20725968-20725987 MS.gene44556:CDS 40.0%
GGAAGGATGGAACAAATATG+GGG - chr1.4:20727085-20727104 MS.gene44556:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG - chr1.4:20727120-20727139 MS.gene44556:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG - chr1.4:20727084-20727103 MS.gene44556:CDS 40.0%
GTCTATGGAAGCTGCAAAAA+TGG - chr1.4:20726543-20726562 MS.gene44556:CDS 40.0%
TACAGGAGGATAAAGTCTCA+AGG + chr1.4:20726969-20726988 None:intergenic 40.0%
TCAAGATACTCATCTCTCGA+AGG + chr1.4:20726911-20726930 None:intergenic 40.0%
TGGAATTTAAGCCTGAGAGA+TGG - chr1.4:20727119-20727138 MS.gene44556:CDS 40.0%
TGGGAAGGATGGAACAAATA+TGG - chr1.4:20727083-20727102 MS.gene44556:CDS 40.0%
TGGTCAAGAAAGGAAGCTAA+GGG - chr1.4:20726574-20726593 MS.gene44556:CDS 40.0%
TTGGTCAAGAAAGGAAGCTA+AGG - chr1.4:20726573-20726592 MS.gene44556:CDS 40.0%
TTGTTTCCATACGTGCGAAT+TGG + chr1.4:20726219-20726238 None:intergenic 40.0%
! ATATGCTCAAAAGGTACAGG+AGG + chr1.4:20726983-20727002 None:intergenic 40.0%
!! AATTTTGGCAACTACGGAAG+GGG - chr1.4:20726143-20726162 MS.gene44556:CDS 40.0%
!! AGAATTTTGGCAACTACGGA+AGG - chr1.4:20726141-20726160 MS.gene44556:CDS 40.0%
!! GAATTTTGGCAACTACGGAA+GGG - chr1.4:20726142-20726161 MS.gene44556:CDS 40.0%
!! GCACTTTCTCTCTTTTTAGC+AGG - chr1.4:20726761-20726780 MS.gene44556:CDS 40.0%
!! GTCTCCAATAGTGGATGTAT+AGG + chr1.4:20725917-20725936 None:intergenic 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG - chr1.4:20727277-20727296 MS.gene44556:CDS 40.0%
AAAGAAAGCTTCGGGGTTAC+AGG + chr1.4:20727307-20727326 None:intergenic 45.0%
AACTGAGACCTGAAGTAACC+GGG + chr1.4:20726793-20726812 None:intergenic 45.0%
AAGAAAGCTTCGGGGTTACA+GGG + chr1.4:20727306-20727325 None:intergenic 45.0%
ACAGGACCTGGAAGTTGTAT+GGG - chr1.4:20727199-20727218 MS.gene44556:CDS 45.0%
ACCTGGAAGTTGTATGGGTA+AGG - chr1.4:20727204-20727223 MS.gene44556:CDS 45.0%
ACTCTTTGTACGCTATGGGA+AGG - chr1.4:20727068-20727087 MS.gene44556:CDS 45.0%
AGTCAGATTCTCCTCTTGTG+TGG + chr1.4:20726888-20726907 None:intergenic 45.0%
CAACTGAGACCTGAAGTAAC+CGG + chr1.4:20726794-20726813 None:intergenic 45.0%
CTCTATTGCGTCTCCAATAG+TGG + chr1.4:20725926-20725945 None:intergenic 45.0%
CTGCAAAAATGGCTCAACGT+TGG - chr1.4:20726554-20726573 MS.gene44556:CDS 45.0%
GATAAGCTAGTGTACCTCCA+CGG - chr1.4:20726929-20726948 MS.gene44556:CDS 45.0%
GCACTAATGAAGGAAGGATC+TGG - chr1.4:20726701-20726720 MS.gene44556:CDS 45.0%
GCCGGTAGCATACCAATTAT+TGG + chr1.4:20725972-20725991 None:intergenic 45.0%
TAAGCCTGAGAGATGGGTAT+CGG - chr1.4:20727126-20727145 MS.gene44556:CDS 45.0%
TACAGGACCTGGAAGTTGTA+TGG - chr1.4:20727198-20727217 MS.gene44556:CDS 45.0%
TCCTTACCCATACAACTTCC+AGG + chr1.4:20727208-20727227 None:intergenic 45.0%
TGAAGGAAGGATCTGGAAAG+GGG - chr1.4:20726708-20726727 MS.gene44556:CDS 45.0%
TGTATGTGAAGTAGGTGCTC+AGG - chr1.4:20726346-20726365 MS.gene44556:CDS 45.0%
TTTGTACGCTATGGGAAGGA+TGG - chr1.4:20727072-20727091 MS.gene44556:CDS 45.0%
! CGTTTCGATTTGAAGGAGCT+TGG - chr1.4:20726057-20726076 MS.gene44556:CDS 45.0%
! GATAGATTACGCAAAAGCGC+CGG + chr1.4:20725990-20726009 None:intergenic 45.0%
! GGAGGAACGTTTCGATTTGA+AGG - chr1.4:20726050-20726069 MS.gene44556:CDS 45.0%
!! ATTTTGGCAACTACGGAAGG+GGG - chr1.4:20726144-20726163 MS.gene44556:CDS 45.0%
!! CTTTTTAGCAGGAAATGGCC+CGG - chr1.4:20726772-20726791 MS.gene44556:CDS 45.0%
!!! CAGGTCTCAGTTGGTTTTTC+TGG - chr1.4:20726801-20726820 MS.gene44556:CDS 45.0%
AATATGGGGAGAAGACTGGC+TGG - chr1.4:20727099-20727118 MS.gene44556:CDS 50.0%
AGATAACTGGGCCACACAAG+AGG - chr1.4:20726874-20726893 MS.gene44556:CDS 50.0%
AGGATCTGGAAAGGGGGAAA+TGG - chr1.4:20726715-20726734 MS.gene44556:CDS 50.0%
ATGTGAAGTAGGTGCTCAGG+TGG - chr1.4:20726349-20726368 MS.gene44556:CDS 50.0%
CGCACGTATGGAAACAACAG+CGG - chr1.4:20726222-20726241 MS.gene44556:CDS 50.0%
CGGTTACTTCAGGTCTCAGT+TGG - chr1.4:20726792-20726811 MS.gene44556:CDS 50.0%
CTTTCCGATACCCATCTCTC+AGG + chr1.4:20727133-20727152 None:intergenic 50.0%
GAAGGAAGGATCTGGAAAGG+GGG - chr1.4:20726709-20726728 MS.gene44556:CDS 50.0%
GACAACGTGGTATGAAGTGC+CGG + chr1.4:20726526-20726545 None:intergenic 50.0%
GCACTTGCTTTGCTCTTGCT+TGG + chr1.4:20726648-20726667 None:intergenic 50.0%
GGCTCAACGTTGGTCAAGAA+AGG - chr1.4:20726564-20726583 MS.gene44556:CDS 50.0%
GTGCAGCAGCAGTGAAGATA+TGG - chr1.4:20726664-20726683 MS.gene44556:CDS 50.0%
TGCAGCTTCCATAGACAACG+TGG + chr1.4:20726539-20726558 None:intergenic 50.0%
!! GAGAGATGGGTATCGGAAAG+AGG - chr1.4:20727133-20727152 MS.gene44556:CDS 50.0%
ACCTGGAGGATGCCTTGAGT+AGG - chr1.4:20726372-20726391 MS.gene44556:CDS 55.0%
AGGCTTCACATAGAGCTCCG+TGG + chr1.4:20726949-20726968 None:intergenic 55.0%
CTTCACATAGAGCTCCGTGG+AGG + chr1.4:20726946-20726965 None:intergenic 55.0%
GGAAATGGCCCGGTTACTTC+AGG - chr1.4:20726782-20726801 MS.gene44556:CDS 55.0%
GGACTAACACGCTCTCCACT+AGG + chr1.4:20727031-20727050 None:intergenic 55.0%
! ACCTACTCAAGGCATCCTCC+AGG + chr1.4:20726376-20726395 None:intergenic 55.0%
AGTAGGTGCTCAGGTGGACC+TGG - chr1.4:20726355-20726374 MS.gene44556:CDS 60.0%
AGGTGCTCAGGTGGACCTGG+AGG - chr1.4:20726358-20726377 MS.gene44556:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 20725867 20727381 20725867 ID=MS.gene44556
chr1.4 mRNA 20725867 20727381 20725867 ID=MS.gene44556.t1;Parent=MS.gene44556
chr1.4 exon 20725867 20727381 20725867 ID=MS.gene44556.t1.exon1;Parent=MS.gene44556.t1
chr1.4 CDS 20725867 20727381 20725867 ID=cds.MS.gene44556.t1;Parent=MS.gene44556.t1
Gene Sequence

>MS.gene44556

ATGTCAATAATTCAGTGTATAGGAGGATTTGTAGCCATCCTAATCTTCCTATACATCCACTATTGGAGACGCAATAGAGATGAATTTGTACCAATTAATTGGCCAATAATTGGTATGCTACCGGCGCTTTTGCGTAATCTATCCAATTTCCATGATTATGTAACCTTTTTCATGAAACATCATGGAGGAACGTTTCGATTTGAAGGAGCTTGGTTCACAAACACTAGTTTTATCGTTACCAGTGATCCAATGAATGTTGATCACATTGCAAGCAAGAATTTTGGCAACTACGGAAGGGGGTCGAACTTCCAAGATATTTTTGATTTTTTTGGAGGTGGTATTTTAAATTCCAATTCGCACGTATGGAAACAACAGCGGACAATGTTTCATTCATTTCTCAAAAGGAAAACCTTCAAGAACTTCTTCCAACAAACTATGAAGAAAAAGTTGGAGAACTGCCTACTACCATTTCTTAATGATGTATGTGAAGTAGGTGCTCAGGTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTACATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCAACGTTGGTCAAGAAAGGAAGCTAAGGGAAGCCGAAGAAAATCTTGACAGTTTCTTGTATGAAAGTATTACATTTTCCAAGCAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGATATGGATGACTTCCTAAAAGCACTAATGAAGGAAGGATCTGGAAAGGGGGAAATGGATGAGAAGTATCTTAGAGACAATGCACTTTCTCTCTTTTTAGCAGGAAATGGCCCGGTTACTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATCATTCAAGAAATCAAAGATAACTGGGCCACACAAGAGGAGAATCTGACTCCTTCGAGAGATGAGTATCTTGATAAGCTAGTGTACCTCCACGGAGCTCTATGTGAAGCCTTGAGACTTTATCCTCCTGTACCTTTTGAGCATATATGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTATTATACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGGCTGGAATTTAAGCCTGAGAGATGGGTATCGGAAAGAGGACAGATTATACATGTACCATCTTACAAGTTCATTGCTTTCAATACAGGACCTGGAAGTTGTATGGGTAAGGATATTAGCTTCATTCAAATGAAAATGGTCGCAGCTGCTTTGTTACCGAAATTTCACATAAAGGTGGTGGAAGGTCACCCTGTAACCCCGAAGCTTTCTTTTGTTCTTCACATGAAACATGGTTTAAAGGTTAAAGTCAGTAAAAGATGCATTTGA
Protein sequence

>MS.gene44556.t1

MSIIQCIGGFVAILIFLYIHYWRRNRDEFVPINWPIIGMLPALLRNLSNFHDYVTFFMKHHGGTFRFEGAWFTNTSFIVTSDPMNVDHIASKNFGNYGRGSNFQDIFDFFGGGILNSNSHVWKQQRTMFHSFLKRKTFKNFFQQTMKKKLENCLLPFLNDVCEVGAQVDLEDALSRFTFDSICTITFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFIPRCLWKLQKWLNVGQERKLREAEENLDSFLYESITFSKQEQSKCSSSEDMDDFLKALMKEGSGKGEMDEKYLRDNALSLFLAGNGPVTSGLSWFFWLVSTHPIVEAKIIQEIKDNWATQEENLTPSRDEYLDKLVYLHGALCEALRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDWLEFKPERWVSERGQIIHVPSYKFIAFNTGPGSCMGKDISFIQMKMVAAALLPKFHIKVVEGHPVTPKLSFVLHMKHGLKVKVSKRCI