AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23967


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23967.t1 MTR_1g069715 96.314 407 15 0 83 489 1 407 0.0 825
MS.gene23967.t1 MTR_1g035670 75.490 510 118 4 1 509 1 504 0.0 798
MS.gene23967.t1 MTR_1g036130 73.725 510 131 3 1 509 1 508 0.0 781
MS.gene23967.t1 MTR_1g036010 70.646 511 146 4 1 509 1 509 0.0 756
MS.gene23967.t1 MTR_1g035760 71.765 510 114 3 1 509 1 481 0.0 744
MS.gene23967.t1 MTR_1g035830 69.863 511 150 4 1 509 1 509 0.0 736
MS.gene23967.t1 MTR_1g035940 69.863 511 150 4 1 509 1 509 0.0 736
MS.gene23967.t1 MTR_1g035750 63.725 510 181 4 1 509 1 507 0.0 687
MS.gene23967.t1 MTR_1g035860 72.789 441 113 4 10 449 16 450 0.0 660
MS.gene23967.t1 MTR_1g035790 61.057 511 190 4 1 509 1 504 0.0 652
MS.gene23967.t1 MTR_1g036200 61.829 503 180 5 10 509 8 501 0.0 639
MS.gene23967.t1 MTR_1g035580 60.861 511 185 5 1 509 1 498 0.0 637
MS.gene23967.t1 MTR_1g050362 60.707 509 195 5 3 508 1 507 0.0 635
MS.gene23967.t1 MTR_1g035800 60.624 513 195 5 1 507 1 512 0.0 634
MS.gene23967.t1 MTR_1g036270 59.029 515 203 7 1 509 1 513 0.0 627
MS.gene23967.t1 MTR_7g033580 52.505 499 222 5 12 509 12 496 0.0 540
MS.gene23967.t1 MTR_7g033570 51.297 501 229 5 10 509 10 496 0.0 535
MS.gene23967.t1 MTR_8g088470 51.703 499 225 7 11 507 7 491 0.0 527
MS.gene23967.t1 MTR_6g004630 48.718 507 243 8 10 509 9 505 8.02e-173 497
MS.gene23967.t1 MTR_6g004600 47.348 509 254 6 10 509 14 517 8.60e-171 492
MS.gene23967.t1 MTR_6g004670 47.732 507 252 6 4 507 9 505 4.90e-168 484
MS.gene23967.t1 MTR_6g004590 48.361 488 236 7 32 509 36 517 1.97e-165 478
MS.gene23967.t1 MTR_6g004610 49.576 472 225 7 38 506 1 462 1.21e-162 470
MS.gene23967.t1 MTR_1g037560 38.523 501 277 12 23 508 60 544 1.16e-120 365
MS.gene23967.t1 MTR_4g075110 36.523 512 310 6 4 507 45 549 7.93e-118 358
MS.gene23967.t1 MTR_1g037550 38.966 503 276 12 23 508 60 548 7.14e-117 355
MS.gene23967.t1 MTR_6g084040 82.609 184 14 1 1 184 1 166 2.49e-102 304
MS.gene23967.t1 MTR_4g012320 59.091 220 90 0 290 509 6 225 6.38e-97 293
MS.gene23967.t1 MTR_8g098435 35.102 490 286 11 33 507 33 505 4.30e-91 288
MS.gene23967.t1 MTR_8g030590 34.560 489 295 10 33 507 33 510 5.10e-91 288
MS.gene23967.t1 MTR_5g070010 32.653 490 300 9 33 507 34 508 1.39e-86 276
MS.gene23967.t1 MTR_3g463060 33.265 487 288 11 34 507 40 502 3.91e-80 259
MS.gene23967.t1 MTR_1g070365 34.483 493 292 11 24 507 34 504 4.71e-79 256
MS.gene23967.t1 MTR_7g096340 32.114 492 296 12 29 508 38 503 4.53e-77 251
MS.gene23967.t1 MTR_7g088330 31.907 514 307 12 13 507 19 508 1.21e-75 247
MS.gene23967.t1 MTR_1g070345 32.591 494 300 11 25 508 35 505 4.15e-75 246
MS.gene23967.t1 MTR_8g035860 31.836 512 314 13 10 507 19 509 6.50e-75 245
MS.gene23967.t1 MTR_7g096320 31.504 492 299 11 29 508 39 504 6.32e-74 243
MS.gene23967.t1 MTR_8g035820 32.444 487 297 11 34 507 42 509 1.21e-73 242
MS.gene23967.t1 MTR_8g035810 31.507 511 318 14 10 507 19 510 2.77e-73 241
MS.gene23967.t1 MTR_3g080580 29.941 511 315 10 18 507 29 517 1.84e-71 237
MS.gene23967.t1 MTR_8g035780 33.676 487 293 15 34 508 43 511 1.11e-70 234
MS.gene23967.t1 MTR_4g054920 34.459 444 256 12 79 507 93 516 6.24e-70 232
MS.gene23967.t1 MTR_8g035680 29.569 487 307 12 34 507 49 512 2.90e-69 231
MS.gene23967.t1 MTR_8g035760 29.652 489 303 11 34 507 49 511 6.22e-69 229
MS.gene23967.t1 MTR_7g029275 30.966 507 320 14 13 507 20 508 1.50e-68 229
MS.gene23967.t1 MTR_4g119660 28.977 528 321 13 13 508 11 516 1.83e-68 228
MS.gene23967.t1 MTR_5g019140 28.868 530 319 15 13 508 26 531 2.65e-67 226
MS.gene23967.t1 MTR_1g060550 34.644 407 245 6 77 480 93 481 5.83e-67 224
MS.gene23967.t1 MTR_1g102220 29.835 486 307 11 34 507 43 506 1.42e-64 218
MS.gene23967.t1 MTR_2g086040 31.724 435 265 10 79 507 90 498 4.61e-62 211
MS.gene23967.t1 MTR_8g035810 30.973 452 281 13 10 449 19 451 1.04e-59 204
MS.gene23967.t1 MTR_7g406990 33.060 366 229 10 23 382 41 396 1.05e-57 198
MS.gene23967.t1 MTR_8g035680 29.333 375 241 8 140 507 8 365 2.47e-52 182
MS.gene23967.t1 MTR_1g040110 71.560 109 31 0 126 234 57 165 1.99e-48 165
MS.gene23967.t1 MTR_1g050590 68.595 121 33 2 250 370 3 118 1.72e-47 160
MS.gene23967.t1 MTR_8g035810 28.982 383 242 12 10 380 19 383 1.96e-39 147
MS.gene23967.t1 MTR_7g079440 25.971 489 324 18 29 507 188 648 1.98e-39 152
MS.gene23967.t1 MTR_1g070370 35.769 260 142 7 169 425 5 242 7.39e-37 136
MS.gene23967.t1 MTR_1g102210 25.916 382 241 6 133 507 15 361 5.46e-36 137
MS.gene23967.t1 MTR_1g036140 68.687 99 26 2 252 350 69 162 2.50e-35 130
MS.gene23967.t1 MTR_1g036140 63.235 68 24 1 1 67 1 68 2.73e-22 94.0
MS.gene23967.t1 MTR_7g079440 26.341 410 266 16 29 430 188 569 8.48e-31 126
MS.gene23967.t1 MTR_1g062190 23.820 466 309 18 57 507 105 539 4.16e-29 120
MS.gene23967.t1 MTR_3g093530 25.240 416 283 11 95 506 132 523 2.49e-27 115
MS.gene23967.t1 MTR_5g009110 23.566 488 315 18 60 508 103 571 8.66e-27 114
MS.gene23967.t1 MTR_1g035660 43.651 126 54 3 161 286 21 129 1.47e-23 97.1
MS.gene23967.t1 MTR_0181s0030 23.581 458 316 15 31 480 39 470 3.47e-23 103
MS.gene23967.t1 MTR_8g098565 24.869 382 260 11 134 507 144 506 3.89e-22 99.8
MS.gene23967.t1 MTR_5g009110 23.341 437 283 15 110 508 1 423 8.27e-22 98.2
MS.gene23967.t1 MTR_0025s0110 22.601 469 317 16 47 504 90 523 4.78e-21 96.7
MS.gene23967.t1 MTR_6g072490 23.516 455 318 14 52 504 84 510 5.06e-21 96.7
MS.gene23967.t1 MTR_0147s0030 21.957 460 310 13 59 506 108 530 5.48e-21 96.7
MS.gene23967.t1 MTR_2g010320 25.556 360 246 10 157 507 157 503 7.01e-21 95.9
MS.gene23967.t1 MTR_7g079440 25.392 319 211 11 29 340 188 486 8.76e-21 95.5
MS.gene23967.t1 MTR_8g035790 45.455 99 52 2 411 508 1 98 9.25e-21 87.4
MS.gene23967.t1 MTR_7g006900 22.388 402 269 12 109 502 101 467 9.35e-21 95.5
MS.gene23967.t1 MTR_1g101050 22.075 453 315 13 58 504 88 508 1.25e-20 95.5
MS.gene23967.t1 MTR_2g010290 29.741 232 151 6 286 507 303 532 2.51e-20 94.4
MS.gene23967.t1 MTR_7g087520 24.681 470 297 20 31 476 42 478 3.37e-20 94.0
MS.gene23967.t1 MTR_6g017325 24.632 272 187 6 232 502 248 502 4.73e-20 93.6
MS.gene23967.t1 MTR_8g046580 44.330 97 53 1 386 482 197 292 5.15e-20 91.3
MS.gene23967.t1 MTR_8g046580 29.448 163 102 4 34 192 16 169 5.76e-11 63.9
MS.gene23967.t1 MTR_2g010250 31.193 218 143 5 295 507 290 505 6.71e-20 93.2
MS.gene23967.t1 MTR_1g101040 23.308 399 274 12 110 504 142 512 1.20e-19 92.4
MS.gene23967.t1 MTR_6g008640 24.934 381 244 10 119 486 146 497 2.08e-19 91.7
MS.gene23967.t1 MTR_2g010380 25.668 374 247 14 149 507 152 509 2.10e-19 91.7
MS.gene23967.t1 MTR_5g009110 24.713 348 231 14 60 395 103 431 3.38e-19 90.5
MS.gene23967.t1 MTR_4g088420 31.282 195 128 4 293 486 17 206 6.97e-19 86.3
MS.gene23967.t1 MTR_2g010330 24.796 367 246 11 154 507 158 507 1.01e-18 89.4
MS.gene23967.t1 MTR_6g008650 23.964 338 215 11 168 486 185 499 2.01e-18 88.6
MS.gene23967.t1 MTR_8g008530 22.542 417 265 13 109 506 141 518 2.03e-18 88.6
MS.gene23967.t1 MTR_0171s0020 27.652 264 167 8 227 480 227 476 2.69e-18 88.2
MS.gene23967.t1 MTR_0022s0290 25.269 372 241 13 120 476 131 480 3.48e-18 87.8
MS.gene23967.t1 MTR_1g015860 31.200 250 147 10 272 508 292 529 8.50e-18 86.7
MS.gene23967.t1 MTR_2g072270 23.061 490 294 23 41 502 84 518 9.62e-18 86.7
MS.gene23967.t1 MTR_2g010300 24.581 358 240 10 157 508 157 490 9.72e-18 86.3
MS.gene23967.t1 MTR_2g010280 24.370 357 254 9 157 507 157 503 1.03e-17 86.3
MS.gene23967.t1 MTR_6g008500 25.882 255 170 7 232 478 258 501 1.12e-17 86.3
MS.gene23967.t1 MTR_5g070920 26.259 278 177 8 235 502 231 490 1.42e-17 85.9
MS.gene23967.t1 MTR_4g071710 27.820 266 170 9 233 483 226 484 1.72e-17 85.5
MS.gene23967.t1 MTR_8g104030 28.571 252 153 9 237 476 8 244 1.88e-17 83.2
MS.gene23967.t1 MTR_4g113650 22.934 484 331 15 25 502 67 514 3.19e-17 84.7
MS.gene23967.t1 MTR_0171s0030 24.734 376 244 13 138 500 61 410 3.45e-17 84.3
MS.gene23967.t1 MTR_3g014880 25.283 265 176 8 232 486 248 500 3.60e-17 84.7
MS.gene23967.t1 MTR_2g023680 21.780 427 268 15 105 506 132 517 5.77e-17 84.0
MS.gene23967.t1 MTR_7g098550 23.246 456 292 16 60 502 90 500 7.12e-17 83.6
MS.gene23967.t1 MTR_4g104610 21.298 493 343 17 3 477 1 466 9.33e-17 83.2
MS.gene23967.t1 MTR_8g104100 32.240 183 102 7 304 476 59 229 9.45e-17 80.9
MS.gene23967.t1 MTR_8g012585 25.231 325 227 8 167 486 113 426 1.05e-16 82.8
MS.gene23967.t1 MTR_8g042000 24.000 450 282 19 70 499 107 516 1.47e-16 82.8
MS.gene23967.t1 MTR_2g065360 25.134 374 233 13 122 480 99 440 1.52e-16 82.4
MS.gene23967.t1 MTR_6g042540 23.308 266 191 6 232 492 241 498 1.87e-16 82.4
MS.gene23967.t1 MTR_0171s0010 25.000 372 237 13 138 490 149 497 1.98e-16 82.4
MS.gene23967.t1 MTR_8g042020 22.673 419 264 15 109 506 143 522 2.42e-16 82.0
MS.gene23967.t1 MTR_1g085680 24.370 238 157 7 276 502 286 511 2.53e-16 82.0
MS.gene23967.t1 MTR_8g042060 21.711 456 299 17 70 506 107 523 2.92e-16 82.0
MS.gene23967.t1 MTR_5g070690 30.645 186 118 4 305 488 300 476 2.96e-16 81.6
MS.gene23967.t1 MTR_5g070800 30.645 186 118 4 305 488 300 476 2.96e-16 81.6
MS.gene23967.t1 MTR_3g104560 31.513 238 139 9 284 508 176 402 4.00e-16 80.9
MS.gene23967.t1 MTR_7g055793 21.133 459 317 12 58 506 45 468 4.27e-16 81.3
MS.gene23967.t1 MTR_7g055793 21.133 459 317 12 58 506 100 523 5.06e-16 81.3
MS.gene23967.t1 MTR_6g008530 24.111 253 167 6 237 478 257 495 5.07e-16 81.3
MS.gene23967.t1 MTR_7g098550 22.272 449 297 13 60 502 90 492 5.24e-16 80.9
MS.gene23967.t1 MTR_4g094775 23.158 475 336 12 6 476 8 457 6.46e-16 80.9
MS.gene23967.t1 MTR_7g103450 26.210 248 148 6 246 476 252 481 8.58e-16 80.5
MS.gene23967.t1 MTR_2g062670 29.121 182 95 4 168 340 67 223 8.71e-16 80.1
MS.gene23967.t1 MTR_8g042060 22.807 285 195 8 233 506 217 487 9.76e-16 80.1
MS.gene23967.t1 MTR_8g469360 22.069 435 299 13 81 506 20 423 1.00e-15 79.7
MS.gene23967.t1 MTR_3g104560 31.513 238 139 9 284 508 311 537 1.10e-15 80.1
MS.gene23967.t1 MTR_5g016410 24.235 392 234 13 133 503 147 496 1.24e-15 79.7
MS.gene23967.t1 MTR_4g088425 27.473 273 175 9 221 486 222 478 1.25e-15 79.7
MS.gene23967.t1 MTR_4g095050 26.923 312 202 8 168 476 173 461 1.30e-15 79.7
MS.gene23967.t1 MTR_1g069200 20.957 439 317 12 70 504 97 509 1.61e-15 79.3
MS.gene23967.t1 MTR_1g022040 25.871 201 139 4 302 502 308 498 1.89e-15 79.3
MS.gene23967.t1 MTR_8g469300 23.592 284 205 7 196 477 199 472 1.90e-15 79.3
MS.gene23967.t1 MTR_6g042610 24.060 266 190 7 232 492 241 499 2.02e-15 79.3
MS.gene23967.t1 MTR_6g084090 82.500 40 7 0 287 326 11 50 2.69e-15 70.5
MS.gene23967.t1 MTR_3g025260 23.708 329 218 10 168 483 169 477 3.22e-15 78.6
MS.gene23967.t1 MTR_2g072340 20.713 449 313 14 70 506 98 515 3.50e-15 78.6
MS.gene23967.t1 MTR_4g088400 26.493 268 183 8 221 486 239 494 3.87e-15 78.2
MS.gene23967.t1 MTR_4g089030 22.764 369 258 12 122 483 140 488 3.93e-15 78.2
MS.gene23967.t1 MTR_7g012860 25.392 319 215 11 169 483 172 471 3.96e-15 78.2
MS.gene23967.t1 MTR_0287s0060 25.392 319 215 11 169 483 172 471 3.96e-15 78.2
MS.gene23967.t1 MTR_5g073020 28.796 191 126 5 295 483 291 473 1.25e-14 76.6
MS.gene23967.t1 MTR_5g070700 24.727 275 186 8 235 502 231 491 1.72e-14 76.3
MS.gene23967.t1 MTR_5g070710 26.267 217 148 6 288 502 282 488 2.08e-14 75.9
MS.gene23967.t1 MTR_2g061750 28.804 184 114 4 77 247 15 194 2.14e-14 72.4
MS.gene23967.t1 MTR_5g070840 33.577 137 80 3 347 477 9 140 2.25e-14 71.6
MS.gene23967.t1 MTR_4g104540 23.577 369 239 16 122 477 58 396 2.50e-14 75.5
MS.gene23967.t1 MTR_2g061740 28.804 184 114 4 77 247 15 194 2.52e-14 72.4
MS.gene23967.t1 MTR_6g004570 36.538 104 58 3 250 345 9 112 2.92e-14 73.2
MS.gene23967.t1 MTR_3g436540 23.774 265 187 6 221 483 229 480 3.07e-14 75.5
MS.gene23967.t1 MTR_7g075610 28.804 184 115 6 305 483 302 474 3.12e-14 75.5
MS.gene23967.t1 MTR_5g070830 26.702 191 131 4 288 476 395 578 3.41e-14 75.5
MS.gene23967.t1 MTR_6g008430 27.273 187 130 4 301 486 311 492 4.34e-14 75.1
MS.gene23967.t1 MTR_7g056103 22.727 330 236 9 160 483 163 479 4.98e-14 74.7
MS.gene23967.t1 MTR_2g072400 22.075 453 302 17 70 506 98 515 5.39e-14 74.7
MS.gene23967.t1 MTR_6g008620 23.511 319 220 13 168 478 189 491 6.68e-14 74.3
MS.gene23967.t1 MTR_8g468780 21.891 402 280 13 112 500 48 428 7.20e-14 73.9
MS.gene23967.t1 MTR_4g088405 31.250 192 126 4 296 486 222 408 9.81e-14 73.6
MS.gene23967.t1 MTR_6g084900 28.090 178 111 5 305 476 65 231 1.20e-13 71.6
MS.gene23967.t1 MTR_8g076290 25.101 247 162 7 221 457 217 450 1.50e-13 73.2
MS.gene23967.t1 MTR_5g034900 25.616 203 146 4 308 507 317 517 1.53e-13 73.2
MS.gene23967.t1 MTR_6g084060 75.676 37 9 0 56 92 17 53 1.82e-13 65.5
MS.gene23967.t1 MTR_4g104570 26.857 175 114 5 307 477 1 165 2.32e-13 69.3
MS.gene23967.t1 MTR_6g084770 24.806 258 171 7 230 477 226 470 2.45e-13 72.8
MS.gene23967.t1 MTR_7g075580 27.404 208 130 6 307 504 303 499 2.62e-13 72.4
MS.gene23967.t1 MTR_5g018500 27.381 168 105 5 318 478 3 160 2.63e-13 69.3
MS.gene23967.t1 MTR_8g036185 28.571 189 116 6 305 482 308 488 2.79e-13 72.4
MS.gene23967.t1 MTR_5g007460 26.590 173 117 4 306 476 276 440 3.01e-13 72.4
MS.gene23967.t1 MTR_5g021390 25.101 247 169 7 245 483 246 484 4.57e-13 72.0
MS.gene23967.t1 MTR_4g077210 31.250 160 99 5 304 461 301 451 4.63e-13 71.6
MS.gene23967.t1 MTR_1g107295 25.926 189 130 5 299 483 303 485 5.50e-13 71.6
MS.gene23967.t1 MTR_1g107300 24.444 180 130 4 305 484 1 174 5.89e-13 68.6
MS.gene23967.t1 MTR_0638s0020 23.636 330 224 10 157 480 90 397 8.59e-13 70.5
MS.gene23967.t1 MTR_5g070850 23.577 246 178 4 235 477 231 469 9.51e-13 70.9
MS.gene23967.t1 MTR_2g055430 20.444 450 312 13 70 506 101 517 1.06e-12 70.9
MS.gene23967.t1 MTR_5g095230 25.126 199 138 4 310 506 324 513 1.36e-12 70.5
MS.gene23967.t1 MTR_1g492820 21.281 484 334 20 11 477 29 482 1.71e-12 70.1
MS.gene23967.t1 MTR_1g023730 22.319 345 232 12 157 483 156 482 2.52e-12 69.3
MS.gene23967.t1 MTR_2g061200 26.190 210 141 6 302 506 328 528 3.99e-12 68.9
MS.gene23967.t1 MTR_3g057910 23.810 273 196 6 234 500 230 496 5.03e-12 68.6
MS.gene23967.t1 MTR_2g055470 20.667 450 311 13 70 506 101 517 6.08e-12 68.2
MS.gene23967.t1 MTR_3g076550 24.382 283 177 9 221 500 224 472 7.47e-12 67.8
MS.gene23967.t1 MTR_5g073250 21.961 255 188 6 229 483 228 471 8.49e-12 67.8
MS.gene23967.t1 MTR_5g470730 27.027 148 100 2 288 433 285 426 8.88e-12 67.4
MS.gene23967.t1 MTR_5g026520 24.514 257 178 8 262 507 257 508 9.25e-12 67.8
MS.gene23967.t1 MTR_2g437840 26.984 189 127 5 288 476 280 457 1.07e-11 67.4
MS.gene23967.t1 MTR_3g058220 21.941 474 313 20 30 483 36 472 1.21e-11 67.4
MS.gene23967.t1 MTR_5g007450 24.757 206 144 5 280 483 272 468 1.27e-11 67.4
MS.gene23967.t1 MTR_0059s0170 25.912 274 167 10 224 483 222 473 1.32e-11 67.4
MS.gene23967.t1 MTR_6g035115 21.106 398 252 12 103 476 102 461 1.40e-11 67.0
MS.gene23967.t1 MTR_2g072380 25.381 197 140 3 310 506 161 350 1.75e-11 66.2
MS.gene23967.t1 MTR_5g007550 24.623 199 139 5 280 476 272 461 2.02e-11 66.6
MS.gene23967.t1 MTR_2g072380 25.381 197 140 3 310 506 301 490 2.61e-11 66.2
MS.gene23967.t1 MTR_5g070973 27.083 144 100 3 347 488 9 149 3.51e-11 62.8
MS.gene23967.t1 MTR_5g073230 23.413 252 174 6 237 483 223 460 3.90e-11 65.9
MS.gene23967.t1 MTR_5g094540 26.471 204 132 6 281 476 271 464 4.09e-11 65.5
MS.gene23967.t1 MTR_2g073420 24.444 225 141 8 262 476 271 476 4.57e-11 65.5
MS.gene23967.t1 MTR_8g073960 24.510 306 200 11 201 490 222 512 4.75e-11 65.5
MS.gene23967.t1 MTR_5g075450 23.396 265 181 7 219 478 224 471 4.83e-11 65.5
MS.gene23967.t1 MTR_4g031820 20.655 397 292 8 106 499 144 520 5.02e-11 65.5
MS.gene23967.t1 MTR_2g072310 23.858 197 143 3 310 506 161 350 5.11e-11 64.7
MS.gene23967.t1 MTR_2g450040 27.869 122 86 2 358 478 362 482 6.32e-11 65.1
MS.gene23967.t1 MTR_3g020780 23.841 302 206 10 194 482 191 481 6.55e-11 65.1
MS.gene23967.t1 MTR_3g076560 22.835 254 178 7 227 476 240 479 7.17e-11 65.1
MS.gene23967.t1 MTR_3g467220 25.641 195 134 5 286 476 300 487 9.28e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23967.t1 AT4G39500 41.386 505 281 5 11 508 21 517 1.51e-138 410
MS.gene23967.t1 AT4G32170 41.910 513 284 7 1 508 1 504 8.51e-138 407
MS.gene23967.t1 AT2G23180 39.961 518 294 7 1 507 1 512 1.38e-137 407
MS.gene23967.t1 AT4G39500 42.316 475 262 4 38 508 1 467 4.23e-134 397
MS.gene23967.t1 AT4G39490 39.845 517 284 9 12 509 10 518 5.71e-134 398
MS.gene23967.t1 AT1G57750 38.552 511 294 6 4 508 1 497 8.12e-134 397
MS.gene23967.t1 AT4G39510 41.283 499 281 5 14 508 16 506 2.34e-129 386
MS.gene23967.t1 AT1G47620 40.748 481 274 5 32 508 43 516 1.67e-128 384
MS.gene23967.t1 AT2G21910 41.393 488 272 8 28 509 29 508 1.84e-128 384
MS.gene23967.t1 AT4G39480 40.272 514 287 7 7 509 11 515 3.70e-127 380
MS.gene23967.t1 AT5G52320 40.084 479 270 6 32 506 36 501 7.98e-123 369
MS.gene23967.t1 AT5G52320 39.662 474 269 6 32 501 36 496 3.13e-120 362
MS.gene23967.t1 AT1G65340 38.446 489 283 6 23 506 27 502 6.20e-120 362
MS.gene23967.t1 AT5G02900 38.953 516 271 11 1 508 1 480 2.67e-114 346
MS.gene23967.t1 AT5G08250 36.100 518 307 8 4 509 37 542 3.44e-110 338
MS.gene23967.t1 AT5G23190 34.951 515 318 7 4 509 36 542 1.29e-109 337
MS.gene23967.t1 AT5G08250 37.195 492 285 9 30 509 1 480 7.54e-108 330
MS.gene23967.t1 AT1G24540 35.556 495 291 9 26 507 41 520 3.50e-102 317
MS.gene23967.t1 AT3G26125 34.413 494 301 5 32 509 48 534 2.47e-100 312
MS.gene23967.t1 AT1G57750 35.616 438 262 6 4 435 1 424 4.11e-99 306
MS.gene23967.t1 AT1G13140 33.884 484 307 4 33 509 49 526 3.69e-95 299
MS.gene23967.t1 AT1G63710 34.165 521 306 12 8 507 3 507 9.73e-95 297
MS.gene23967.t1 AT2G45970 34.082 490 296 10 33 507 33 510 2.41e-94 297
MS.gene23967.t1 AT1G13150 33.737 495 293 9 33 509 42 519 9.33e-94 295
MS.gene23967.t1 AT4G00360 34.765 489 295 10 33 507 33 511 1.38e-93 295
MS.gene23967.t1 AT1G13140 33.264 484 284 6 33 509 49 500 5.74e-93 292
MS.gene23967.t1 AT1G01600 33.714 525 312 14 1 507 7 513 1.28e-90 288
MS.gene23967.t1 AT5G58860 31.650 515 321 9 6 507 12 508 2.08e-85 273
MS.gene23967.t1 AT3G56630 33.669 496 298 12 23 507 23 498 1.56e-78 254
MS.gene23967.t1 AT1G34540 32.851 484 298 9 32 507 33 497 1.14e-77 252
MS.gene23967.t1 AT2G45510 33.676 487 290 13 34 507 42 508 2.50e-76 249
MS.gene23967.t1 AT2G44890 33.676 487 292 12 34 508 42 509 1.15e-74 244
MS.gene23967.t1 AT2G27690 31.944 432 266 8 77 504 76 483 3.47e-70 233
MS.gene23967.t1 AT2G44890 32.854 487 278 13 34 508 42 491 1.18e-69 231
MS.gene23967.t1 AT3G48520 30.801 487 303 9 31 507 37 499 1.67e-69 231
MS.gene23967.t1 AT5G63450 32.353 442 265 10 77 507 84 502 9.01e-67 224
MS.gene23967.t1 AT5G63450 32.353 442 265 10 77 507 142 560 3.24e-66 224
MS.gene23967.t1 AT3G01900 30.219 503 301 12 19 507 24 490 3.34e-66 222
MS.gene23967.t1 AT1G69500 29.104 536 336 12 3 507 1 523 4.74e-66 222
MS.gene23967.t1 AT1G31800 26.347 501 330 19 18 508 99 570 1.18e-39 152
MS.gene23967.t1 AT3G53130 25.652 460 308 17 57 507 105 539 9.57e-34 134
MS.gene23967.t1 AT5G51900 29.195 298 146 8 218 508 1 240 2.54e-28 113
MS.gene23967.t1 AT5G24900 24.362 431 298 11 82 505 116 525 5.06e-28 117
MS.gene23967.t1 AT5G24900 24.356 427 295 11 85 504 2 407 5.67e-28 116
MS.gene23967.t1 AT4G15110 23.625 491 310 19 60 507 110 578 1.15e-25 111
MS.gene23967.t1 AT2G26710 24.431 483 316 15 35 502 62 510 3.53e-24 106
MS.gene23967.t1 AT1G66030 33.529 170 95 4 1 160 1 162 2.70e-21 91.3
MS.gene23967.t1 AT3G14680 23.729 472 299 15 52 506 84 511 5.96e-21 96.3
MS.gene23967.t1 AT1G01280 22.803 421 286 15 73 477 73 470 2.06e-20 94.7
MS.gene23967.t1 AT4G13310 25.460 326 205 8 162 477 165 462 1.21e-19 92.4
MS.gene23967.t1 AT4G13770 21.448 373 271 7 115 483 116 470 3.25e-19 90.9
MS.gene23967.t1 AT3G14640 22.817 504 329 16 21 499 38 506 3.97e-19 90.9
MS.gene23967.t1 AT5G52400 23.077 455 313 12 52 502 93 514 4.31e-19 90.9
MS.gene23967.t1 AT3G14640 22.817 504 329 16 21 499 60 528 4.94e-19 90.5
MS.gene23967.t1 AT1G64940 27.273 253 170 7 263 507 262 508 6.73e-19 90.1
MS.gene23967.t1 AT2G45580 25.926 378 235 15 125 484 134 484 7.74e-19 89.7
MS.gene23967.t1 AT2G45580 26.479 355 217 14 148 484 2 330 2.05e-18 87.4
MS.gene23967.t1 AT5G24910 22.402 433 309 12 82 507 120 532 2.60e-18 88.2
MS.gene23967.t1 AT5G57260 24.800 375 244 16 122 483 122 471 5.69e-18 87.0
MS.gene23967.t1 AT1G64950 26.877 253 171 6 263 507 261 507 7.52e-18 86.7
MS.gene23967.t1 AT3G14660 22.290 489 310 19 21 480 38 485 8.90e-18 86.7
MS.gene23967.t1 AT1G13100 23.140 363 253 11 122 476 117 461 1.42e-17 85.9
MS.gene23967.t1 AT1G33720 23.992 471 305 17 31 483 43 478 2.29e-17 85.5
MS.gene23967.t1 AT1G33730 26.822 343 223 12 148 483 21 342 2.97e-17 84.0
MS.gene23967.t1 AT1G33730 26.822 343 223 12 148 483 21 342 2.97e-17 84.0
MS.gene23967.t1 AT4G31950 26.953 256 176 6 235 486 234 482 3.05e-17 85.1
MS.gene23967.t1 AT2G30770 29.050 179 123 3 305 483 293 467 4.22e-17 84.3
MS.gene23967.t1 AT4G31500 20.833 504 343 16 1 483 1 469 4.86e-17 84.3
MS.gene23967.t1 AT3G25180 29.167 192 130 5 295 486 298 483 8.73e-17 83.6
MS.gene23967.t1 AT3G61040 32.447 188 111 6 297 476 281 460 1.49e-16 82.8
MS.gene23967.t1 AT3G20140 25.341 367 228 14 150 501 163 498 2.35e-16 82.0
MS.gene23967.t1 AT4G37400 24.528 371 254 11 142 509 144 491 2.41e-16 82.0
MS.gene23967.t1 AT2G45560 25.594 379 248 12 119 483 120 478 2.61e-16 82.0
MS.gene23967.t1 AT4G31940 27.344 256 175 6 235 486 246 494 2.63e-16 82.0
MS.gene23967.t1 AT3G26280 24.518 363 247 9 122 476 141 484 2.98e-16 82.0
MS.gene23967.t1 AT2G45570 26.031 388 246 15 115 483 114 479 3.23e-16 81.6
MS.gene23967.t1 AT3G26280 24.518 363 247 9 122 476 124 467 3.30e-16 81.6
MS.gene23967.t1 AT2G27000 24.908 273 180 11 252 509 246 508 3.95e-16 81.6
MS.gene23967.t1 AT4G37370 23.955 359 236 12 142 490 145 476 4.06e-16 81.3
MS.gene23967.t1 AT3G14610 22.321 448 314 14 56 499 87 504 4.95e-16 81.3
MS.gene23967.t1 AT4G12310 24.382 283 186 9 230 500 239 505 5.24e-16 81.3
MS.gene23967.t1 AT4G37340 23.932 351 211 11 142 476 145 455 5.41e-16 80.9
MS.gene23967.t1 AT1G33720 26.984 252 170 7 235 483 106 346 1.09e-15 79.3
MS.gene23967.t1 AT1G33720 26.984 252 170 7 235 483 106 346 1.09e-15 79.3
MS.gene23967.t1 AT1G33720 26.984 252 170 7 235 483 106 346 1.09e-15 79.3
MS.gene23967.t1 AT5G38450 22.770 426 292 12 85 502 115 511 1.43e-15 79.7
MS.gene23967.t1 AT5G67310 25.767 326 208 10 186 497 190 495 1.53e-15 79.7
MS.gene23967.t1 AT4G31970 25.773 291 186 10 233 502 242 523 1.62e-15 79.7
MS.gene23967.t1 AT4G13290 24.793 363 234 15 122 477 125 455 1.65e-15 79.3
MS.gene23967.t1 AT3G26830 23.810 357 233 11 131 476 133 461 1.87e-15 79.3
MS.gene23967.t1 AT3G48300 21.647 425 266 13 87 502 111 477 1.89e-15 79.3
MS.gene23967.t1 AT3G48300 21.647 425 266 13 87 502 113 479 1.90e-15 79.3
MS.gene23967.t1 AT4G12320 24.211 285 186 9 229 500 236 503 1.92e-15 79.3
MS.gene23967.t1 AT2G24180 22.687 335 241 9 168 500 173 491 1.93e-15 79.3
MS.gene23967.t1 AT2G46950 24.123 228 160 5 280 502 346 565 3.12e-15 79.0
MS.gene23967.t1 AT3G26310 22.857 385 235 14 122 483 122 467 3.37e-15 78.6
MS.gene23967.t1 AT3G03470 26.201 229 159 4 287 507 283 509 3.64e-15 78.6
MS.gene23967.t1 AT2G46960 26.383 235 165 5 269 502 285 512 4.59e-15 78.2
MS.gene23967.t1 AT2G46960 26.383 235 165 5 269 502 169 396 5.31e-15 77.4
MS.gene23967.t1 AT4G39950 24.000 325 226 11 159 476 188 498 6.14e-15 77.8
MS.gene23967.t1 AT2G12190 26.275 255 172 7 263 507 261 509 7.21e-15 77.4
MS.gene23967.t1 AT4G39950 23.795 332 232 11 159 483 228 545 8.43e-15 77.4
MS.gene23967.t1 AT3G26270 24.937 397 251 15 98 476 99 466 9.46e-15 77.0
MS.gene23967.t1 AT1G01190 27.948 229 152 8 273 496 296 516 1.07e-14 77.0
MS.gene23967.t1 AT1G01190 27.948 229 152 8 273 496 301 521 1.17e-14 77.0
MS.gene23967.t1 AT5G06900 25.815 368 236 16 122 480 126 465 2.27e-14 75.9
MS.gene23967.t1 AT4G27710 25.103 243 165 6 265 502 282 512 2.53e-14 75.9
MS.gene23967.t1 AT3G26300 23.467 375 251 13 122 486 123 471 2.61e-14 75.9
MS.gene23967.t1 AT1G67110 30.405 148 96 3 356 502 364 505 2.87e-14 75.5
MS.gene23967.t1 AT5G35715 25.000 264 176 9 219 476 153 400 4.56e-14 74.7
MS.gene23967.t1 AT5G07990 22.840 324 217 11 173 488 178 476 6.04e-14 74.7
MS.gene23967.t1 AT2G22330 26.562 192 135 5 286 476 314 500 6.28e-14 74.7
MS.gene23967.t1 AT5G25120 22.162 370 260 11 122 486 121 467 7.16e-14 74.3
MS.gene23967.t1 AT2G22330 26.562 192 135 5 286 476 337 523 7.23e-14 74.7
MS.gene23967.t1 AT3G48310 20.719 473 304 19 31 482 37 459 8.71e-14 73.9
MS.gene23967.t1 AT1G64930 27.184 206 138 6 308 507 309 508 1.19e-13 73.6
MS.gene23967.t1 AT4G37410 24.110 365 241 13 142 495 144 483 1.24e-13 73.6
MS.gene23967.t1 AT3G28740 26.587 252 158 8 234 482 242 469 1.54e-13 73.2
MS.gene23967.t1 AT1G13080 24.907 269 183 8 219 483 101 354 2.29e-13 72.0
MS.gene23967.t1 AT5G24950 26.554 177 118 3 305 477 293 461 2.30e-13 72.8
MS.gene23967.t1 AT4G37430 21.497 521 324 21 13 497 9 480 3.36e-13 72.4
MS.gene23967.t1 AT1G13080 22.849 372 255 12 122 483 123 472 3.56e-13 72.0
MS.gene23967.t1 AT2G27010 26.293 232 149 9 291 509 264 486 3.59e-13 72.0
MS.gene23967.t1 AT4G37330 27.500 240 149 7 239 476 236 452 3.73e-13 72.0
MS.gene23967.t1 AT1G66540 24.198 343 221 13 166 496 56 371 4.42e-13 71.2
MS.gene23967.t1 AT2G30750 29.070 172 118 3 305 476 293 460 4.51e-13 72.0
MS.gene23967.t1 AT3G26160 23.894 226 153 7 237 457 235 446 4.56e-13 72.0
MS.gene23967.t1 AT3G48270 23.864 176 121 3 305 476 286 452 4.79e-13 71.6
MS.gene23967.t1 AT1G66540 25.556 270 166 10 239 496 66 312 5.55e-13 70.5
MS.gene23967.t1 AT2G23220 22.287 341 238 8 142 481 161 475 8.94e-13 70.9
MS.gene23967.t1 AT1G64900 25.794 252 176 6 264 508 258 505 1.11e-12 70.5
MS.gene23967.t1 AT1G50520 23.077 377 245 16 147 507 163 510 1.63e-12 70.1
MS.gene23967.t1 AT4G15360 22.687 454 291 17 31 463 45 459 1.68e-12 70.1
MS.gene23967.t1 AT3G20940 23.574 263 183 7 253 508 259 510 2.10e-12 69.7
MS.gene23967.t1 AT3G26180 25.385 260 172 10 230 483 229 472 2.15e-12 69.7
MS.gene23967.t1 AT1G50560 23.034 356 234 13 160 501 176 505 2.66e-12 69.3
MS.gene23967.t1 AT3G26180 25.571 219 147 7 271 483 130 338 2.81e-12 68.6
MS.gene23967.t1 AT5G47990 25.417 240 147 10 285 507 283 507 2.94e-12 69.3
MS.gene23967.t1 AT1G16400 22.432 477 313 20 31 477 49 498 5.61e-12 68.6
MS.gene23967.t1 AT2G02580 22.727 374 249 13 122 483 123 468 5.70e-12 68.6
MS.gene23967.t1 AT1G16410 22.059 476 316 18 31 477 50 499 6.70e-12 68.2
MS.gene23967.t1 AT3G61880 24.528 212 146 7 272 477 293 496 7.07e-12 68.2
MS.gene23967.t1 AT3G61880 24.645 211 145 7 272 476 293 495 7.07e-12 68.2
MS.gene23967.t1 AT3G26170 24.164 269 183 10 221 483 219 472 7.52e-12 68.2
MS.gene23967.t1 AT4G37310 23.659 317 217 10 152 461 154 452 1.42e-11 67.0
MS.gene23967.t1 AT5G04330 22.472 267 194 7 221 483 218 475 1.48e-11 67.0
MS.gene23967.t1 AT1G13110 21.429 364 257 14 122 476 124 467 1.57e-11 67.0
MS.gene23967.t1 AT2G42850 24.664 223 158 5 243 465 230 442 1.61e-11 67.0
MS.gene23967.t1 AT3G26200 24.000 350 226 14 122 457 120 443 2.43e-11 66.2
MS.gene23967.t1 AT1G11610 26.168 214 151 4 273 483 258 467 2.47e-11 66.2
MS.gene23967.t1 AT5G36220 23.704 270 173 7 239 506 245 483 2.58e-11 66.2
MS.gene23967.t1 AT3G26190 24.286 350 225 14 122 457 120 443 2.95e-11 66.2
MS.gene23967.t1 AT1G11610 26.168 214 151 4 273 483 258 467 3.59e-11 65.9
MS.gene23967.t1 AT5G36220 23.704 270 173 7 239 506 99 337 3.63e-11 65.1
MS.gene23967.t1 AT1G74110 21.729 451 315 15 73 507 108 536 5.07e-11 65.5
MS.gene23967.t1 AT5G25130 21.818 385 274 11 119 500 118 478 5.42e-11 65.5
MS.gene23967.t1 AT2G25160 33.146 178 104 7 305 477 310 477 5.99e-11 65.1
MS.gene23967.t1 AT3G20100 21.028 428 292 16 98 507 109 508 6.97e-11 65.1

Find 97 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATCTGCATTATTGTATT+TGG 0.098646 1.3:+49230544 MS.gene23967:CDS
CTAAGATCACTAATCTTATT+TGG 0.151101 1.3:-49230586 None:intergenic
GAGTAAATTAACTTGGTATT+TGG 0.194985 1.3:-49231201 None:intergenic
ACTTCATTCCTAGTTGTTTA+TGG 0.198813 1.3:+49230665 MS.gene23967:CDS
TATTTGGATTTGATCCTAAT+TGG 0.230599 1.3:+49230560 MS.gene23967:CDS
ATCTTATTTGGAAGCCAATT+AGG 0.275411 1.3:-49230574 None:intergenic
CACATCGCAAGCAAGAATTT+TGG 0.283007 1.3:+49230262 MS.gene23967:CDS
TCTTTACCCATACAACTTCT+AGG 0.297524 1.3:-49231357 None:intergenic
TGGGAAGGATGGAAGAAATA+TGG 0.301721 1.3:+49231235 MS.gene23967:CDS
TCAGATACATCATTAATAAA+TGG 0.345893 1.3:-49230469 None:intergenic
ACAGAAGCCCTAGGGGTTAC+AGG 0.354307 1.3:-49231456 None:intergenic
AATTTACTCTTTGTATGCTA+TGG 0.370405 1.3:+49231215 MS.gene23967:CDS
GCGATGTGGTTAACGTTCAT+TGG 0.373589 1.3:-49230247 None:intergenic
CTGCAGAAATGGTTTCTTGT+TGG 0.391077 1.3:+49230691 MS.gene23967:CDS
TACAGGACCTAGAAGTTGTA+TGG 0.412532 1.3:+49231350 MS.gene23967:CDS
AAGTTCATAGCTTTCAATAC+AGG 0.418468 1.3:+49231333 MS.gene23967:CDS
TGGTTGCAGCTGCCTTGTTA+TGG 0.421111 1.3:+49231403 MS.gene23967:CDS
GTTTATGGAAGCTGCAGAAA+TGG 0.422474 1.3:+49230680 MS.gene23967:CDS
TCCATGACGTTTCAAAACTA+AGG 0.425545 1.3:-49230164 None:intergenic
GTGCAGCAGCAGTGAAGAAA+TGG 0.426826 1.3:+49230804 MS.gene23967:CDS
AAAATCTCTTATTGTGATAG+AGG 0.429045 1.3:+49230624 MS.gene23967:CDS
GGGAAGGATGGAAGAAATAT+GGG 0.431334 1.3:+49231236 MS.gene23967:CDS
GGAGGAACGTTTCGATTTGA+AGG 0.431858 1.3:+49230184 MS.gene23967:CDS
GTGTATCACAACATGAGAAT+TGG 0.433383 1.3:+49231034 MS.gene23967:CDS
GTTATGGAAGTTTCACATAC+AGG 0.433937 1.3:+49231419 MS.gene23967:CDS
GCAGTGAGATTATGCCGAAT+TGG 0.434027 1.3:+49230080 MS.gene23967:CDS
GTTTCAAAACTAAGGTGAAA+TGG 0.439823 1.3:-49230156 None:intergenic
CATCATTAATAAATGGTAGT+AGG 0.441729 1.3:-49230462 None:intergenic
ATTAATGATGTATCTGAAGC+AGG 0.449572 1.3:+49230475 MS.gene23967:CDS
TGTTTCATTCAATTCTCAAA+AGG 0.451412 1.3:+49230386 MS.gene23967:CDS
GACAGTAGCATACCGACTAT+TGG 0.451726 1.3:-49230103 None:intergenic
ATACCGACTATTGGCCAATT+CGG 0.452549 1.3:-49230094 None:intergenic
TTACACTTTCATACAAGAAT+CGG 0.453389 1.3:-49230753 None:intergenic
GCACTGATGAAGGAAGGTTC+TGG 0.460855 1.3:+49230853 MS.gene23967:CDS
ATTGCATTGATAAGCTCAAA+AGG 0.463041 1.3:-49231141 None:intergenic
TCGAATGAAACATGGCTTGA+AGG 0.466524 1.3:+49231485 MS.gene23967:CDS
ACTTGCAAGATATCTTGAAT+AGG 0.468493 1.3:+49230509 MS.gene23967:CDS
CTCTCTGATACCCATCTCTC+AGG 0.476597 1.3:-49231282 None:intergenic
CACTTAGTTCAAGTCTCAGT+TGG 0.476913 1.3:+49230944 MS.gene23967:CDS
AAAGCTTGTGTTTGTGAACC+AGG 0.479518 1.3:-49230209 None:intergenic
TCCTCTTCTCTTTCCATACG+TGG 0.481641 1.3:-49230360 None:intergenic
TAGTTTCATTCAAATGAAGA+TGG 0.482291 1.3:+49231383 MS.gene23967:CDS
ATTTACTCTTTGTATGCTAT+GGG 0.482323 1.3:+49231216 MS.gene23967:CDS
TCAATTCTGATTCCCACGTA+TGG 0.508498 1.3:+49230347 MS.gene23967:CDS
TCAAGCCATGTTTCATTCGA+AGG 0.511506 1.3:-49231482 None:intergenic
TAGAGGAAGTGCTATTCTAT+AGG 0.514642 1.3:+49230641 MS.gene23967:CDS
ATGTGTATGATTCAATGTAT+TGG 0.516666 1.3:+49230004 MS.gene23967:CDS
GGAATTTAAGCCTGAGAGAT+GGG 0.521678 1.3:+49231272 MS.gene23967:CDS
TGAGAATTGGATAACTTCAA+TGG 0.526252 1.3:+49231047 MS.gene23967:CDS
CTTTGTAAAAGCACTGATGA+AGG 0.527955 1.3:+49230843 MS.gene23967:CDS
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.3:+49230978 MS.gene23967:CDS
GAAGTTTCACATACAGGTGG+TGG 0.531835 1.3:+49231425 MS.gene23967:CDS
TTTGTATGCTATGGGAAGGA+TGG 0.542942 1.3:+49231224 MS.gene23967:CDS
CCTCTTCTCTTTCCATACGT+GGG 0.544456 1.3:-49230359 None:intergenic
CAGAAGCCCTAGGGGTTACA+GGG 0.544544 1.3:-49231455 None:intergenic
TGGAATTTAAGCCTGAGAGA+TGG 0.546234 1.3:+49231271 MS.gene23967:CDS
AAGGTCACCCTGTAACCCCT+AGG 0.554777 1.3:+49231448 MS.gene23967:CDS
GAAGGAAGGTTCTGGAAATG+AGG 0.556159 1.3:+49230861 MS.gene23967:CDS
AAAGCTATGAACTTGTAAGA+TGG 0.556387 1.3:-49231324 None:intergenic
CGAAGGACAACAGAAGCCCT+AGG 0.558935 1.3:-49231465 None:intergenic
CGTTTCGATTTGAAGGACCC+TGG 0.559229 1.3:+49230191 MS.gene23967:CDS
ATAAGCTCAAAAGGTACAGT+AGG 0.563619 1.3:-49231132 None:intergenic
GTAAAAGCACTGATGAAGGA+AGG 0.563972 1.3:+49230847 MS.gene23967:CDS
GGAGGTAGACTAGCTTATCA+AGG 0.564942 1.3:-49231077 None:intergenic
TGCAGCTTCCATAAACAACT+AGG 0.568802 1.3:-49230673 None:intergenic
AATATGGGGAGAAGATTGCA+TGG 0.569835 1.3:+49231251 MS.gene23967:CDS
ATACAAAGAGTAAATTAACT+TGG 0.571875 1.3:-49231208 None:intergenic
TGTATGATTCAATGTATTGG+AGG 0.574728 1.3:+49230007 MS.gene23967:CDS
ACTCTTTGTATGCTATGGGA+AGG 0.574932 1.3:+49231220 MS.gene23967:CDS
GTTGTCCTTCGAATGAAACA+TGG 0.578856 1.3:+49231477 MS.gene23967:CDS
GAAGGACAACAGAAGCCCTA+GGG 0.583414 1.3:-49231464 None:intergenic
TACAGTAGGATACAGCCTCA+TGG 0.584638 1.3:-49231118 None:intergenic
GATAAGCTAGTCTACCTCCA+TGG 0.593821 1.3:+49231081 MS.gene23967:CDS
ACAGGACCTAGAAGTTGTAT+GGG 0.597811 1.3:+49231351 MS.gene23967:CDS
TGGATTCACATATAGCTCCA+TGG 0.609113 1.3:-49231098 None:intergenic
CCCACGTATGGAAAGAGAAG+AGG 0.609263 1.3:+49230359 MS.gene23967:CDS
GAAACATGGCTTGAAGGTCA+AGG 0.612274 1.3:+49231491 MS.gene23967:CDS
GAGAGATGGGTATCAGAGAG+AGG 0.617792 1.3:+49231285 MS.gene23967:CDS
AGGTCACCCTGTAACCCCTA+GGG 0.618514 1.3:+49231449 MS.gene23967:CDS
AATAGTCGGTATGCTACTGT+CGG 0.626608 1.3:+49230105 MS.gene23967:CDS
TGGTCAAGAAAAGAAGTACA+AGG 0.628979 1.3:+49230711 MS.gene23967:CDS
AAATCTGATATACTACCTAG+TGG 0.629278 1.3:+49231165 MS.gene23967:CDS
ATCTGAAGCAGGTTCTGAGG+TGG 0.632283 1.3:+49230486 MS.gene23967:CDS
ATGCCGAATTGGCCAATAGT+CGG 0.633076 1.3:+49230091 MS.gene23967:CDS
GAATTGGATAACTTCAATGG+TGG 0.638480 1.3:+49231050 MS.gene23967:CDS
TTTCACATACAGGTGGTGGA+AGG 0.639771 1.3:+49231429 MS.gene23967:CDS
CAAAATTCTTGCTTGCGATG+TGG 0.640167 1.3:-49230261 None:intergenic
AAGCTTGTGTTTGTGAACCA+GGG 0.641414 1.3:-49230208 None:intergenic
GGACTAACATTCTCTCCACT+AGG 0.648789 1.3:-49231180 None:intergenic
ATGGAAGTTTCACATACAGG+TGG 0.670752 1.3:+49231422 MS.gene23967:CDS
GGAAGGATGGAAGAAATATG+GGG 0.674772 1.3:+49231237 MS.gene23967:CDS
TATGTGAAACTTCCATAACA+AGG 0.681788 1.3:-49231415 None:intergenic
TGTATCTGAAGCAGGTTCTG+AGG 0.694599 1.3:+49230483 MS.gene23967:CDS
ATCTACTATTGGCGACACAG+TGG 0.712323 1.3:+49230058 MS.gene23967:CDS
AAGGACAACAGAAGCCCTAG+GGG 0.719502 1.3:-49231463 None:intergenic
GAGCTATATGTGAATCCATG+AGG 0.761271 1.3:+49231103 MS.gene23967:CDS
ATTCACATATAGCTCCATGG+AGG 0.774024 1.3:-49231095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATTCAAAAATTTCT+TGG - chr1.3:49230315-49230334 None:intergenic 15.0%
!!! CAAGAAATTTTTGAATTTTT+TGG + chr1.3:49230313-49230332 MS.gene23967:CDS 15.0%
!! ATACAAAGAGTAAATTAACT+TGG - chr1.3:49231211-49231230 None:intergenic 20.0%
!! TCAGATACATCATTAATAAA+TGG - chr1.3:49230472-49230491 None:intergenic 20.0%
!!! GAAATTTTTGAATTTTTTGG+AGG + chr1.3:49230316-49230335 MS.gene23967:CDS 20.0%
!!! TTTTCATTTACATCTACTAT+TGG + chr1.3:49230047-49230066 MS.gene23967:CDS 20.0%
! AAAATCTCTTATTGTGATAG+AGG + chr1.3:49230624-49230643 MS.gene23967:CDS 25.0%
! AATTTACTCTTTGTATGCTA+TGG + chr1.3:49231215-49231234 MS.gene23967:CDS 25.0%
! AGTAGATGTAAATGAAAAAG+AGG - chr1.3:49230045-49230064 None:intergenic 25.0%
! ATGTGTATGATTCAATGTAT+TGG + chr1.3:49230004-49230023 MS.gene23967:CDS 25.0%
! ATTTACTCTTTGTATGCTAT+GGG + chr1.3:49231216-49231235 MS.gene23967:CDS 25.0%
! CATCATTAATAAATGGTAGT+AGG - chr1.3:49230465-49230484 None:intergenic 25.0%
! CTAAGATCACTAATCTTATT+TGG - chr1.3:49230589-49230608 None:intergenic 25.0%
! TAGTTTCATTCAAATGAAGA+TGG + chr1.3:49231383-49231402 MS.gene23967:CDS 25.0%
! TATTTGGATTTGATCCTAAT+TGG + chr1.3:49230560-49230579 MS.gene23967:CDS 25.0%
! TGTTTCATTCAATTCTCAAA+AGG + chr1.3:49230386-49230405 MS.gene23967:CDS 25.0%
! TTACACTTTCATACAAGAAT+CGG - chr1.3:49230756-49230775 None:intergenic 25.0%
!! ATAATTTTTGCTTCCACAAT+AGG - chr1.3:49230994-49231013 None:intergenic 25.0%
!! GAGTAAATTAACTTGGTATT+TGG - chr1.3:49231204-49231223 None:intergenic 25.0%
!!! ATTTTTGAATTTTTTGGAGG+TGG + chr1.3:49230319-49230338 MS.gene23967:CDS 25.0%
AAAGCTATGAACTTGTAAGA+TGG - chr1.3:49231327-49231346 None:intergenic 30.0%
AAATCTGATATACTACCTAG+TGG + chr1.3:49231165-49231184 MS.gene23967:CDS 30.0%
AAGTTCATAGCTTTCAATAC+AGG + chr1.3:49231333-49231352 MS.gene23967:CDS 30.0%
ACAAACTAGTCAAAAAAAGC+TGG + chr1.3:49230432-49230451 MS.gene23967:CDS 30.0%
ACTTCATTCCTAGTTGTTTA+TGG + chr1.3:49230665-49230684 MS.gene23967:CDS 30.0%
ACTTGCAAGATATCTTGAAT+AGG + chr1.3:49230509-49230528 MS.gene23967:CDS 30.0%
AGCATCTGCATTATTGTATT+TGG + chr1.3:49230544-49230563 MS.gene23967:CDS 30.0%
GTTTCAAAACTAAGGTGAAA+TGG - chr1.3:49230159-49230178 None:intergenic 30.0%
TATGTGAAACTTCCATAACA+AGG - chr1.3:49231418-49231437 None:intergenic 30.0%
TGAGAATTGGATAACTTCAA+TGG + chr1.3:49231047-49231066 MS.gene23967:CDS 30.0%
TGTATGATTCAATGTATTGG+AGG + chr1.3:49230007-49230026 MS.gene23967:CDS 30.0%
! ATCTTATTTGGAAGCCAATT+AGG - chr1.3:49230577-49230596 None:intergenic 30.0%
! ATTAATGATGTATCTGAAGC+AGG + chr1.3:49230475-49230494 MS.gene23967:CDS 30.0%
! ATTGCATTGATAAGCTCAAA+AGG - chr1.3:49231144-49231163 None:intergenic 30.0%
!!! GCTTTTTTTGACTAGTTTGT+TGG - chr1.3:49230432-49230451 None:intergenic 30.0%
GAATTGGATAACTTCAATGG+TGG + chr1.3:49231050-49231069 MS.gene23967:CDS 35.0%
GTGTATCACAACATGAGAAT+TGG + chr1.3:49231034-49231053 MS.gene23967:CDS 35.0%
GTTATGGAAGTTTCACATAC+AGG + chr1.3:49231419-49231438 MS.gene23967:CDS 35.0%
TCCATGACGTTTCAAAACTA+AGG - chr1.3:49230167-49230186 None:intergenic 35.0%
TCTTTACCCATACAACTTCT+AGG - chr1.3:49231360-49231379 None:intergenic 35.0%
TGTTTCAACTCATCCTATTG+TGG + chr1.3:49230978-49230997 MS.gene23967:CDS 35.0%
! ATAAGCTCAAAAGGTACAGT+AGG - chr1.3:49231135-49231154 None:intergenic 35.0%
! TCTCTTTTGTTAGCAGGTAA+TGG + chr1.3:49230919-49230938 MS.gene23967:CDS 35.0%
! TGGTCAAGAAAAGAAGTACA+AGG + chr1.3:49230711-49230730 MS.gene23967:CDS 35.0%
!! AGCAAGAATTTTGGCAACTA+TGG + chr1.3:49230271-49230290 MS.gene23967:CDS 35.0%
!! CTTTGTAAAAGCACTGATGA+AGG + chr1.3:49230843-49230862 MS.gene23967:CDS 35.0%
!! GCAAGAATTTTGGCAACTAT+GGG + chr1.3:49230272-49230291 MS.gene23967:CDS 35.0%
!! TAGAGGAAGTGCTATTCTAT+AGG + chr1.3:49230641-49230660 MS.gene23967:CDS 35.0%
!!! ACCTTAGTTTTGAAACGTCA+TGG + chr1.3:49230163-49230182 MS.gene23967:CDS 35.0%
!!! TTAGTTTTGAAACGTCATGG+AGG + chr1.3:49230166-49230185 MS.gene23967:CDS 35.0%
AAAGCTTGTGTTTGTGAACC+AGG - chr1.3:49230212-49230231 None:intergenic 40.0%
AAGCTTGTGTTTGTGAACCA+GGG - chr1.3:49230211-49230230 None:intergenic 40.0%
AATAGTCGGTATGCTACTGT+CGG + chr1.3:49230105-49230124 MS.gene23967:CDS 40.0%
AATATGGGGAGAAGATTGCA+TGG + chr1.3:49231251-49231270 MS.gene23967:CDS 40.0%
ACAGGACCTAGAAGTTGTAT+GGG + chr1.3:49231351-49231370 MS.gene23967:CDS 40.0%
ACTCTTTGTATGCTATGGGA+AGG + chr1.3:49231220-49231239 MS.gene23967:CDS 40.0%
ATGGAAGTTTCACATACAGG+TGG + chr1.3:49231422-49231441 MS.gene23967:CDS 40.0%
ATTCACATATAGCTCCATGG+AGG - chr1.3:49231098-49231117 None:intergenic 40.0%
CAAAATTCTTGCTTGCGATG+TGG - chr1.3:49230264-49230283 None:intergenic 40.0%
CACTTAGTTCAAGTCTCAGT+TGG + chr1.3:49230944-49230963 MS.gene23967:CDS 40.0%
CTGCAGAAATGGTTTCTTGT+TGG + chr1.3:49230691-49230710 MS.gene23967:CDS 40.0%
GAGCTATATGTGAATCCATG+AGG + chr1.3:49231103-49231122 MS.gene23967:CDS 40.0%
GGAAGGATGGAAGAAATATG+GGG + chr1.3:49231237-49231256 MS.gene23967:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG + chr1.3:49231272-49231291 MS.gene23967:CDS 40.0%
GGGAAGGATGGAAGAAATAT+GGG + chr1.3:49231236-49231255 MS.gene23967:CDS 40.0%
GTTGTCCTTCGAATGAAACA+TGG + chr1.3:49231477-49231496 MS.gene23967:CDS 40.0%
GTTTATGGAAGCTGCAGAAA+TGG + chr1.3:49230680-49230699 MS.gene23967:CDS 40.0%
TACAGGACCTAGAAGTTGTA+TGG + chr1.3:49231350-49231369 MS.gene23967:CDS 40.0%
TCAAGCCATGTTTCATTCGA+AGG - chr1.3:49231485-49231504 None:intergenic 40.0%
TCAATTCTGATTCCCACGTA+TGG + chr1.3:49230347-49230366 MS.gene23967:CDS 40.0%
TCGAATGAAACATGGCTTGA+AGG + chr1.3:49231485-49231504 MS.gene23967:CDS 40.0%
TGCAGCTTCCATAAACAACT+AGG - chr1.3:49230676-49230695 None:intergenic 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.3:49231271-49231290 MS.gene23967:CDS 40.0%
TGGATTCACATATAGCTCCA+TGG - chr1.3:49231101-49231120 None:intergenic 40.0%
TGGGAAGGATGGAAGAAATA+TGG + chr1.3:49231235-49231254 MS.gene23967:CDS 40.0%
TTTGTATGCTATGGGAAGGA+TGG + chr1.3:49231224-49231243 MS.gene23967:CDS 40.0%
! ATACCGACTATTGGCCAATT+CGG - chr1.3:49230097-49230116 None:intergenic 40.0%
! CACATCGCAAGCAAGAATTT+TGG + chr1.3:49230262-49230281 MS.gene23967:CDS 40.0%
!! AATTTTGGCAACTATGGGAG+GGG + chr1.3:49230277-49230296 MS.gene23967:CDS 40.0%
!! AGAATTTTGGCAACTATGGG+AGG + chr1.3:49230275-49230294 MS.gene23967:CDS 40.0%
!! GAATTTTGGCAACTATGGGA+GGG + chr1.3:49230276-49230295 MS.gene23967:CDS 40.0%
!! GTAAAAGCACTGATGAAGGA+AGG + chr1.3:49230847-49230866 MS.gene23967:CDS 40.0%
!!! CAAGTCTCAGTTGGTTTTTC+TGG + chr1.3:49230953-49230972 MS.gene23967:CDS 40.0%
ATCTACTATTGGCGACACAG+TGG + chr1.3:49230058-49230077 MS.gene23967:CDS 45.0%
ATGCCGAATTGGCCAATAGT+CGG + chr1.3:49230091-49230110 MS.gene23967:CDS 45.0%
CCTCTTCTCTTTCCATACGT+GGG - chr1.3:49230362-49230381 None:intergenic 45.0%
GAAACATGGCTTGAAGGTCA+AGG + chr1.3:49231491-49231510 MS.gene23967:CDS 45.0%
GAAGTTTCACATACAGGTGG+TGG + chr1.3:49231425-49231444 MS.gene23967:CDS 45.0%
GCAGTGAGATTATGCCGAAT+TGG + chr1.3:49230080-49230099 MS.gene23967:CDS 45.0%
GCGATGTGGTTAACGTTCAT+TGG - chr1.3:49230250-49230269 None:intergenic 45.0%
GGACTAACATTCTCTCCACT+AGG - chr1.3:49231183-49231202 None:intergenic 45.0%
TACAGTAGGATACAGCCTCA+TGG - chr1.3:49231121-49231140 None:intergenic 45.0%
TCCTCTTCTCTTTCCATACG+TGG - chr1.3:49230363-49230382 None:intergenic 45.0%
! GACAGTAGCATACCGACTAT+TGG - chr1.3:49230106-49230125 None:intergenic 45.0%
! GATAAGCTAGTCTACCTCCA+TGG + chr1.3:49231081-49231100 MS.gene23967:CDS 45.0%
! GCACTCTCTCTTTTGTTAGC+AGG + chr1.3:49230913-49230932 MS.gene23967:CDS 45.0%
! GGAGGAACGTTTCGATTTGA+AGG + chr1.3:49230184-49230203 MS.gene23967:CDS 45.0%
! TGTATCTGAAGCAGGTTCTG+AGG + chr1.3:49230483-49230502 MS.gene23967:CDS 45.0%
!! ATTTTGGCAACTATGGGAGG+GGG + chr1.3:49230278-49230297 MS.gene23967:CDS 45.0%
!! CTTGCTTTTCTCTTCGCGTT+TGG - chr1.3:49230785-49230804 None:intergenic 45.0%
!! GAAGGAAGGTTCTGGAAATG+AGG + chr1.3:49230861-49230880 MS.gene23967:CDS 45.0%
!! GGAGGTAGACTAGCTTATCA+AGG - chr1.3:49231080-49231099 None:intergenic 45.0%
!! TTTCACATACAGGTGGTGGA+AGG + chr1.3:49231429-49231448 MS.gene23967:CDS 45.0%
AAGGACAACAGAAGCCCTAG+GGG - chr1.3:49231466-49231485 None:intergenic 50.0%
CCCACGTATGGAAAGAGAAG+AGG + chr1.3:49230359-49230378 MS.gene23967:CDS 50.0%
CTCTCTGATACCCATCTCTC+AGG - chr1.3:49231285-49231304 None:intergenic 50.0%
GAAGGACAACAGAAGCCCTA+GGG - chr1.3:49231467-49231486 None:intergenic 50.0%
GAGAGATGGGTATCAGAGAG+AGG + chr1.3:49231285-49231304 MS.gene23967:CDS 50.0%
GTGCAGCAGCAGTGAAGAAA+TGG + chr1.3:49230804-49230823 MS.gene23967:CDS 50.0%
! CGTTTCGATTTGAAGGACCC+TGG + chr1.3:49230191-49230210 MS.gene23967:CDS 50.0%
! GCACTGATGAAGGAAGGTTC+TGG + chr1.3:49230853-49230872 MS.gene23967:CDS 50.0%
! TGGTTGCAGCTGCCTTGTTA+TGG + chr1.3:49231403-49231422 MS.gene23967:CDS 50.0%
!! ATCTGAAGCAGGTTCTGAGG+TGG + chr1.3:49230486-49230505 MS.gene23967:CDS 50.0%
AAGGTCACCCTGTAACCCCT+AGG + chr1.3:49231448-49231467 MS.gene23967:CDS 55.0%
ACAGAAGCCCTAGGGGTTAC+AGG - chr1.3:49231459-49231478 None:intergenic 55.0%
AGGTCACCCTGTAACCCCTA+GGG + chr1.3:49231449-49231468 MS.gene23967:CDS 55.0%
CAGAAGCCCTAGGGGTTACA+GGG - chr1.3:49231458-49231477 None:intergenic 55.0%
CGAAGGACAACAGAAGCCCT+AGG - chr1.3:49231468-49231487 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 49230004 49231533 49230004 ID=MS.gene23967
chr1.3 mRNA 49230004 49231533 49230004 ID=MS.gene23967.t1;Parent=MS.gene23967
chr1.3 exon 49230004 49231533 49230004 ID=MS.gene23967.t1.exon1;Parent=MS.gene23967.t1
chr1.3 CDS 49230004 49231533 49230004 ID=cds.MS.gene23967.t1;Parent=MS.gene23967.t1
Gene Sequence

>MS.gene23967

ATGTGTATGATTCAATGTATTGGAGGATTTGCAGCTATCCTCTTTTTCATTTACATCTACTATTGGCGACACAGTGGCAGTGAGATTATGCCGAATTGGCCAATAGTCGGTATGCTACTGTCGGTGTTGCGTCATCTGTCAAGTTTCAATGACCATTTCACCTTAGTTTTGAAACGTCATGGAGGAACGTTTCGATTTGAAGGACCCTGGTTCACAAACACAAGCTTTATCGCTACTGCTGATCCAATGAACGTTAACCACATCGCAAGCAAGAATTTTGGCAACTATGGGAGGGGGTCTAATAACTTCCAAGAAATTTTTGAATTTTTTGGAGGTGGTATTGTCAATTCTGATTCCCACGTATGGAAAGAGAAGAGGACAATGTTTCATTCAATTCTCAAAAGGAAAAGCTTCAAGAGCTTGTTCCAACAAACTAGTCAAAAAAAGCTGGAGAAATTCCTACTACCATTTATTAATGATGTATCTGAAGCAGGTTCTGAGGTGGACTTGCAAGATATCTTGAATAGGTTCACTTTTGACAGCATCTGCATTATTGTATTTGGATTTGATCCTAATTGGCTTCCAAATAAGATTAGTGATCTTAGAGAAATTTCATATCAAAAATCTCTTATTGTGATAGAGGAAGTGCTATTCTATAGGAACTTCATTCCTAGTTGTTTATGGAAGCTGCAGAAATGGTTTCTTGTTGGTCAAGAAAAGAAGTACAAGGTAGCTCAAGAAAATCTTGACCGATTCTTGTATGAAAGTGTAACATTTGCCAAACGCGAAGAGAAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATGAATGTTCTTTCAACTTTGTAAAAGCACTGATGAAGGAAGGTTCTGGAAATGAGGCAGTGAGTGAGAAGTATCTTAGAGACAATGCACTCTCTCTTTTGTTAGCAGGTAATGGCACACTTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCAAAAATTATTCAAGAGATCAAAGATAATTGTGTATCACAACATGAGAATTGGATAACTTCAATGGTGGAAAGCCTTGATAAGCTAGTCTACCTCCATGGAGCTATATGTGAATCCATGAGGCTGTATCCTACTGTACCTTTTGAGCTTATCAATGCAATCAAATCTGATATACTACCTAGTGGAGAGAATGTTAGTCCAAATACCAAGTTAATTTACTCTTTGTATGCTATGGGAAGGATGGAAGAAATATGGGGAGAAGATTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGAGAGGACACATTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGACCTAGAAGTTGTATGGGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTTGCAGCTGCCTTGTTATGGAAGTTTCACATACAGGTGGTGGAAGGTCACCCTGTAACCCCTAGGGCTTCTGTTGTCCTTCGAATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGATGCATTTGA

Protein sequence

>MS.gene23967.t1

MCMIQCIGGFAAILFFIYIYYWRHSGSEIMPNWPIVGMLLSVLRHLSSFNDHFTLVLKRHGGTFRFEGPWFTNTSFIATADPMNVNHIASKNFGNYGRGSNNFQEIFEFFGGGIVNSDSHVWKEKRTMFHSILKRKSFKSLFQQTSQKKLEKFLLPFINDVSEAGSEVDLQDILNRFTFDSICIIVFGFDPNWLPNKISDLREISYQKSLIVIEEVLFYRNFIPSCLWKLQKWFLVGQEKKYKVAQENLDRFLYESVTFAKREEKSKCSSSEEMDECSFNFVKALMKEGSGNEAVSEKYLRDNALSLLLAGNGTLSSSLSWFFWLVSTHPIVEAKIIQEIKDNCVSQHENWITSMVESLDKLVYLHGAICESMRLYPTVPFELINAIKSDILPSGENVSPNTKLIYSLYAMGRMEEIWGEDCMEFKPERWVSERGHIIHVPSYKFIAFNTGPRSCMGKDLSFIQMKMVAAALLWKFHIQVVEGHPVTPRASVVLRMKHGLKVKVTKRCI