Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036057.t1 | RHN80009.1 | 90.5 | 412 | 17 | 1 | 83 | 472 | 1 | 412 | 2.90E-214 | 754.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036057.t1 | Q9FVS9 | 37.8 | 510 | 278 | 7 | 1 | 485 | 1 | 496 | 3.0e-103 | 377.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036057.t1 | A0A396JP04 | 90.5 | 412 | 17 | 1 | 83 | 472 | 1 | 412 | 2.1e-214 | 754.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036057.t1 | MTR_1g069715 | 89.926 | 407 | 19 | 1 | 83 | 467 | 1 | 407 | 0.0 | 764 |
MS.gene036057.t1 | MTR_1g035670 | 72.941 | 510 | 109 | 5 | 1 | 487 | 1 | 504 | 0.0 | 756 |
MS.gene036057.t1 | MTR_1g036130 | 71.176 | 510 | 122 | 4 | 1 | 487 | 1 | 508 | 0.0 | 743 |
MS.gene036057.t1 | MTR_1g036010 | 68.297 | 511 | 136 | 5 | 1 | 487 | 1 | 509 | 0.0 | 716 |
MS.gene036057.t1 | MTR_1g035760 | 71.516 | 488 | 131 | 4 | 1 | 487 | 1 | 481 | 0.0 | 714 |
MS.gene036057.t1 | MTR_1g035830 | 67.906 | 511 | 138 | 5 | 1 | 487 | 1 | 509 | 0.0 | 698 |
MS.gene036057.t1 | MTR_1g035940 | 67.710 | 511 | 139 | 5 | 1 | 487 | 1 | 509 | 0.0 | 698 |
MS.gene036057.t1 | MTR_1g035750 | 60.904 | 509 | 175 | 4 | 1 | 487 | 1 | 507 | 0.0 | 648 |
MS.gene036057.t1 | MTR_1g035860 | 70.522 | 441 | 101 | 5 | 10 | 427 | 16 | 450 | 0.0 | 626 |
MS.gene036057.t1 | MTR_1g035790 | 59.802 | 505 | 184 | 5 | 1 | 487 | 1 | 504 | 0.0 | 620 |
MS.gene036057.t1 | MTR_1g036200 | 59.443 | 503 | 170 | 5 | 10 | 487 | 8 | 501 | 0.0 | 606 |
MS.gene036057.t1 | MTR_1g035580 | 59.295 | 511 | 171 | 6 | 1 | 487 | 1 | 498 | 0.0 | 606 |
MS.gene036057.t1 | MTR_1g035800 | 58.285 | 513 | 185 | 5 | 1 | 485 | 1 | 512 | 0.0 | 599 |
MS.gene036057.t1 | MTR_1g050362 | 58.153 | 509 | 186 | 6 | 3 | 486 | 1 | 507 | 0.0 | 599 |
MS.gene036057.t1 | MTR_1g036270 | 56.505 | 515 | 194 | 7 | 1 | 487 | 1 | 513 | 0.0 | 589 |
MS.gene036057.t1 | MTR_7g033580 | 50.699 | 501 | 228 | 5 | 1 | 487 | 1 | 496 | 0.0 | 520 |
MS.gene036057.t1 | MTR_7g033570 | 50.202 | 494 | 227 | 5 | 8 | 487 | 8 | 496 | 1.00e-178 | 511 |
MS.gene036057.t1 | MTR_8g088470 | 50.816 | 490 | 221 | 6 | 11 | 485 | 7 | 491 | 5.40e-177 | 506 |
MS.gene036057.t1 | MTR_6g004630 | 46.918 | 503 | 230 | 8 | 10 | 487 | 15 | 505 | 2.22e-160 | 464 |
MS.gene036057.t1 | MTR_6g004600 | 44.401 | 509 | 247 | 6 | 10 | 487 | 14 | 517 | 6.64e-157 | 456 |
MS.gene036057.t1 | MTR_6g004670 | 44.970 | 507 | 244 | 6 | 4 | 485 | 9 | 505 | 7.02e-155 | 450 |
MS.gene036057.t1 | MTR_6g004590 | 44.272 | 515 | 240 | 8 | 11 | 487 | 12 | 517 | 3.53e-153 | 446 |
MS.gene036057.t1 | MTR_6g004610 | 46.610 | 472 | 217 | 7 | 38 | 484 | 1 | 462 | 2.42e-149 | 435 |
MS.gene036057.t1 | MTR_1g037560 | 37.325 | 501 | 261 | 12 | 23 | 486 | 60 | 544 | 1.63e-112 | 343 |
MS.gene036057.t1 | MTR_4g075110 | 35.421 | 511 | 295 | 6 | 4 | 485 | 45 | 549 | 3.31e-111 | 340 |
MS.gene036057.t1 | MTR_1g037550 | 36.255 | 502 | 269 | 11 | 23 | 486 | 60 | 548 | 2.30e-106 | 328 |
MS.gene036057.t1 | MTR_6g084040 | 83.696 | 184 | 12 | 1 | 1 | 184 | 1 | 166 | 3.37e-103 | 306 |
MS.gene036057.t1 | MTR_4g012320 | 59.606 | 203 | 82 | 0 | 285 | 487 | 23 | 225 | 5.46e-89 | 271 |
MS.gene036057.t1 | MTR_8g098435 | 34.025 | 482 | 280 | 10 | 33 | 485 | 33 | 505 | 3.61e-85 | 271 |
MS.gene036057.t1 | MTR_8g030590 | 33.060 | 487 | 283 | 11 | 33 | 485 | 33 | 510 | 1.31e-84 | 271 |
MS.gene036057.t1 | MTR_5g070010 | 32.158 | 482 | 291 | 8 | 33 | 485 | 34 | 508 | 7.74e-84 | 268 |
MS.gene036057.t1 | MTR_3g463060 | 32.704 | 477 | 282 | 9 | 34 | 485 | 40 | 502 | 1.44e-77 | 251 |
MS.gene036057.t1 | MTR_1g070365 | 33.951 | 486 | 282 | 11 | 24 | 485 | 34 | 504 | 2.12e-76 | 248 |
MS.gene036057.t1 | MTR_7g096340 | 31.818 | 484 | 294 | 11 | 25 | 486 | 34 | 503 | 3.82e-74 | 242 |
MS.gene036057.t1 | MTR_7g096320 | 31.884 | 483 | 293 | 12 | 25 | 485 | 35 | 503 | 5.64e-72 | 237 |
MS.gene036057.t1 | MTR_1g070345 | 32.158 | 482 | 296 | 10 | 25 | 486 | 35 | 505 | 5.19e-71 | 234 |
MS.gene036057.t1 | MTR_7g088330 | 31.014 | 503 | 304 | 13 | 13 | 485 | 19 | 508 | 1.88e-69 | 230 |
MS.gene036057.t1 | MTR_8g035780 | 32.582 | 488 | 282 | 15 | 31 | 486 | 39 | 511 | 2.27e-66 | 222 |
MS.gene036057.t1 | MTR_3g080580 | 29.158 | 487 | 303 | 9 | 31 | 485 | 41 | 517 | 3.24e-66 | 222 |
MS.gene036057.t1 | MTR_7g029275 | 30.120 | 498 | 314 | 12 | 13 | 485 | 20 | 508 | 1.05e-64 | 218 |
MS.gene036057.t1 | MTR_8g035860 | 30.255 | 509 | 304 | 14 | 10 | 485 | 19 | 509 | 2.89e-64 | 216 |
MS.gene036057.t1 | MTR_4g054920 | 33.180 | 434 | 253 | 11 | 79 | 485 | 93 | 516 | 3.24e-64 | 217 |
MS.gene036057.t1 | MTR_8g035760 | 29.278 | 485 | 288 | 12 | 34 | 485 | 49 | 511 | 7.91e-64 | 216 |
MS.gene036057.t1 | MTR_8g035680 | 28.986 | 483 | 293 | 13 | 34 | 485 | 49 | 512 | 1.55e-63 | 215 |
MS.gene036057.t1 | MTR_8g035810 | 30.255 | 509 | 305 | 16 | 10 | 485 | 19 | 510 | 1.09e-62 | 213 |
MS.gene036057.t1 | MTR_8g035820 | 30.228 | 483 | 291 | 11 | 34 | 485 | 42 | 509 | 3.07e-62 | 211 |
MS.gene036057.t1 | MTR_4g119660 | 28.166 | 529 | 302 | 14 | 13 | 486 | 11 | 516 | 9.04e-62 | 210 |
MS.gene036057.t1 | MTR_5g019140 | 28.060 | 531 | 300 | 16 | 13 | 486 | 26 | 531 | 9.39e-61 | 208 |
MS.gene036057.t1 | MTR_1g060550 | 33.503 | 394 | 245 | 7 | 77 | 458 | 93 | 481 | 1.86e-60 | 207 |
MS.gene036057.t1 | MTR_1g102220 | 28.452 | 478 | 302 | 11 | 34 | 485 | 43 | 506 | 1.49e-59 | 204 |
MS.gene036057.t1 | MTR_2g086040 | 29.867 | 452 | 287 | 12 | 48 | 485 | 63 | 498 | 4.56e-57 | 197 |
MS.gene036057.t1 | MTR_7g406990 | 31.148 | 366 | 214 | 9 | 23 | 360 | 41 | 396 | 1.05e-51 | 181 |
MS.gene036057.t1 | MTR_8g035810 | 29.953 | 424 | 253 | 12 | 34 | 427 | 42 | 451 | 2.91e-50 | 178 |
MS.gene036057.t1 | MTR_1g040110 | 72.477 | 109 | 30 | 0 | 126 | 234 | 57 | 165 | 6.43e-49 | 166 |
MS.gene036057.t1 | MTR_8g035680 | 29.178 | 353 | 217 | 8 | 158 | 485 | 21 | 365 | 3.89e-46 | 164 |
MS.gene036057.t1 | MTR_1g102210 | 28.358 | 335 | 216 | 7 | 161 | 485 | 41 | 361 | 1.68e-35 | 135 |
MS.gene036057.t1 | MTR_1g070370 | 36.694 | 248 | 134 | 6 | 169 | 403 | 5 | 242 | 8.75e-34 | 128 |
MS.gene036057.t1 | MTR_1g050590 | 56.198 | 121 | 26 | 3 | 250 | 348 | 3 | 118 | 7.09e-33 | 121 |
MS.gene036057.t1 | MTR_8g035810 | 27.559 | 381 | 228 | 14 | 10 | 358 | 19 | 383 | 3.03e-30 | 122 |
MS.gene036057.t1 | MTR_7g079440 | 24.074 | 486 | 315 | 17 | 29 | 485 | 188 | 648 | 4.64e-30 | 124 |
MS.gene036057.t1 | MTR_1g035660 | 43.651 | 126 | 54 | 3 | 161 | 286 | 21 | 129 | 2.16e-23 | 96.3 |
MS.gene036057.t1 | MTR_1g036140 | 64.706 | 68 | 23 | 1 | 1 | 67 | 1 | 68 | 7.80e-23 | 95.5 |
MS.gene036057.t1 | MTR_1g036140 | 54.545 | 99 | 18 | 3 | 252 | 328 | 69 | 162 | 2.27e-21 | 91.3 |
MS.gene036057.t1 | MTR_7g079440 | 24.324 | 407 | 256 | 15 | 29 | 408 | 188 | 569 | 1.22e-22 | 101 |
MS.gene036057.t1 | MTR_2g010250 | 30.837 | 227 | 147 | 5 | 263 | 485 | 285 | 505 | 5.18e-22 | 99.4 |
MS.gene036057.t1 | MTR_2g010290 | 29.956 | 227 | 149 | 5 | 263 | 485 | 312 | 532 | 1.09e-21 | 98.6 |
MS.gene036057.t1 | MTR_8g098565 | 27.559 | 254 | 172 | 5 | 238 | 485 | 259 | 506 | 2.12e-21 | 97.4 |
MS.gene036057.t1 | MTR_5g009110 | 23.251 | 486 | 297 | 18 | 60 | 486 | 103 | 571 | 4.61e-21 | 96.7 |
MS.gene036057.t1 | MTR_2g010320 | 25.070 | 355 | 232 | 10 | 157 | 485 | 157 | 503 | 8.98e-21 | 95.5 |
MS.gene036057.t1 | MTR_3g093530 | 24.634 | 410 | 271 | 12 | 95 | 484 | 132 | 523 | 1.59e-20 | 94.7 |
MS.gene036057.t1 | MTR_8g035790 | 44.444 | 99 | 53 | 2 | 389 | 486 | 1 | 98 | 6.92e-20 | 85.1 |
MS.gene036057.t1 | MTR_2g010380 | 29.075 | 227 | 151 | 5 | 263 | 485 | 289 | 509 | 9.89e-20 | 92.4 |
MS.gene036057.t1 | MTR_2g010330 | 24.862 | 362 | 230 | 10 | 154 | 485 | 158 | 507 | 1.78e-19 | 91.7 |
MS.gene036057.t1 | MTR_0181s0030 | 23.465 | 456 | 297 | 15 | 31 | 458 | 39 | 470 | 2.10e-19 | 91.3 |
MS.gene036057.t1 | MTR_8g046580 | 43.299 | 97 | 54 | 1 | 364 | 460 | 197 | 292 | 2.98e-19 | 88.6 |
MS.gene036057.t1 | MTR_2g010280 | 29.333 | 225 | 149 | 5 | 265 | 485 | 285 | 503 | 3.01e-19 | 90.9 |
MS.gene036057.t1 | MTR_0147s0030 | 23.325 | 403 | 283 | 12 | 95 | 484 | 141 | 530 | 3.54e-18 | 87.8 |
MS.gene036057.t1 | MTR_6g072490 | 28.452 | 239 | 156 | 8 | 245 | 482 | 286 | 510 | 3.71e-18 | 87.4 |
MS.gene036057.t1 | MTR_7g006900 | 27.404 | 208 | 133 | 6 | 274 | 480 | 277 | 467 | 1.01e-17 | 85.9 |
MS.gene036057.t1 | MTR_8g008530 | 21.717 | 396 | 272 | 11 | 109 | 484 | 141 | 518 | 2.83e-17 | 84.7 |
MS.gene036057.t1 | MTR_1g101050 | 21.957 | 460 | 307 | 14 | 47 | 482 | 77 | 508 | 4.21e-17 | 84.3 |
MS.gene036057.t1 | MTR_2g010300 | 25.627 | 359 | 213 | 13 | 157 | 486 | 157 | 490 | 5.91e-17 | 83.6 |
MS.gene036057.t1 | MTR_6g017325 | 27.885 | 208 | 132 | 6 | 274 | 480 | 312 | 502 | 5.97e-17 | 84.0 |
MS.gene036057.t1 | MTR_4g088420 | 28.804 | 184 | 125 | 3 | 282 | 464 | 28 | 206 | 5.98e-17 | 80.5 |
MS.gene036057.t1 | MTR_2g072270 | 23.581 | 458 | 267 | 20 | 63 | 480 | 104 | 518 | 1.02e-16 | 83.2 |
MS.gene036057.t1 | MTR_1g101040 | 27.907 | 215 | 141 | 6 | 269 | 482 | 311 | 512 | 1.22e-16 | 82.8 |
MS.gene036057.t1 | MTR_1g015860 | 31.276 | 243 | 139 | 11 | 256 | 486 | 303 | 529 | 1.98e-16 | 82.4 |
MS.gene036057.t1 | MTR_1g085680 | 26.027 | 219 | 140 | 6 | 267 | 480 | 310 | 511 | 3.81e-16 | 81.3 |
MS.gene036057.t1 | MTR_1g022040 | 22.611 | 429 | 289 | 14 | 70 | 480 | 95 | 498 | 6.35e-16 | 80.5 |
MS.gene036057.t1 | MTR_7g087520 | 23.011 | 465 | 289 | 20 | 31 | 454 | 42 | 478 | 8.72e-16 | 80.1 |
MS.gene036057.t1 | MTR_5g009110 | 22.759 | 435 | 266 | 15 | 110 | 486 | 1 | 423 | 1.76e-15 | 79.0 |
MS.gene036057.t1 | MTR_4g113650 | 22.129 | 479 | 315 | 14 | 27 | 480 | 69 | 514 | 2.02e-15 | 79.0 |
MS.gene036057.t1 | MTR_8g042020 | 25.110 | 227 | 136 | 7 | 269 | 484 | 319 | 522 | 4.11e-15 | 78.2 |
MS.gene036057.t1 | MTR_2g061750 | 29.348 | 184 | 113 | 4 | 77 | 247 | 15 | 194 | 7.52e-15 | 73.6 |
MS.gene036057.t1 | MTR_7g098550 | 24.429 | 438 | 279 | 17 | 60 | 480 | 90 | 492 | 8.91e-15 | 77.0 |
MS.gene036057.t1 | MTR_2g061740 | 29.348 | 184 | 113 | 4 | 77 | 247 | 15 | 194 | 1.00e-14 | 73.6 |
MS.gene036057.t1 | MTR_2g065360 | 24.518 | 363 | 227 | 12 | 122 | 458 | 99 | 440 | 1.18e-14 | 76.6 |
MS.gene036057.t1 | MTR_0171s0020 | 25.391 | 256 | 161 | 7 | 227 | 458 | 227 | 476 | 2.34e-14 | 75.9 |
MS.gene036057.t1 | MTR_7g055793 | 22.321 | 448 | 303 | 12 | 58 | 484 | 100 | 523 | 2.43e-14 | 75.9 |
MS.gene036057.t1 | MTR_7g055793 | 22.321 | 448 | 303 | 12 | 58 | 484 | 45 | 468 | 3.04e-14 | 75.1 |
MS.gene036057.t1 | MTR_0025s0110 | 21.645 | 462 | 308 | 17 | 47 | 482 | 90 | 523 | 3.15e-14 | 75.5 |
MS.gene036057.t1 | MTR_5g070920 | 26.984 | 189 | 130 | 4 | 292 | 480 | 310 | 490 | 3.50e-14 | 75.1 |
MS.gene036057.t1 | MTR_5g009110 | 24.128 | 344 | 216 | 12 | 60 | 373 | 103 | 431 | 3.66e-14 | 75.1 |
MS.gene036057.t1 | MTR_1g069200 | 24.766 | 214 | 149 | 5 | 269 | 482 | 308 | 509 | 5.83e-14 | 74.3 |
MS.gene036057.t1 | MTR_6g008640 | 23.138 | 376 | 235 | 9 | 119 | 464 | 146 | 497 | 5.84e-14 | 74.7 |
MS.gene036057.t1 | MTR_8g042060 | 23.077 | 221 | 148 | 5 | 269 | 484 | 284 | 487 | 6.73e-14 | 74.3 |
MS.gene036057.t1 | MTR_8g042060 | 23.077 | 221 | 148 | 5 | 269 | 484 | 320 | 523 | 8.45e-14 | 73.9 |
MS.gene036057.t1 | MTR_6g008500 | 26.437 | 174 | 112 | 4 | 289 | 456 | 338 | 501 | 8.59e-14 | 73.9 |
MS.gene036057.t1 | MTR_5g070690 | 28.333 | 180 | 118 | 4 | 289 | 466 | 306 | 476 | 1.13e-13 | 73.6 |
MS.gene036057.t1 | MTR_5g070800 | 28.333 | 180 | 118 | 4 | 289 | 466 | 306 | 476 | 1.13e-13 | 73.6 |
MS.gene036057.t1 | MTR_5g070840 | 28.966 | 145 | 94 | 2 | 315 | 455 | 1 | 140 | 1.34e-13 | 69.3 |
MS.gene036057.t1 | MTR_8g104030 | 28.061 | 196 | 123 | 6 | 263 | 454 | 63 | 244 | 1.78e-13 | 71.2 |
MS.gene036057.t1 | MTR_5g016440 | 27.442 | 215 | 145 | 6 | 275 | 487 | 284 | 489 | 1.85e-13 | 72.8 |
MS.gene036057.t1 | MTR_7g098550 | 26.351 | 148 | 103 | 2 | 333 | 480 | 359 | 500 | 2.10e-13 | 72.8 |
MS.gene036057.t1 | MTR_8g104100 | 27.536 | 207 | 124 | 8 | 258 | 454 | 39 | 229 | 2.27e-13 | 70.5 |
MS.gene036057.t1 | MTR_3g024520 | 23.647 | 351 | 220 | 14 | 142 | 461 | 144 | 477 | 2.51e-13 | 72.4 |
MS.gene036057.t1 | MTR_6g084060 | 78.378 | 37 | 8 | 0 | 56 | 92 | 17 | 53 | 2.56e-13 | 64.7 |
MS.gene036057.t1 | MTR_7g079440 | 23.101 | 316 | 200 | 11 | 29 | 318 | 188 | 486 | 3.28e-13 | 72.0 |
MS.gene036057.t1 | MTR_6g042540 | 24.468 | 188 | 137 | 3 | 284 | 470 | 315 | 498 | 5.81e-13 | 71.2 |
MS.gene036057.t1 | MTR_4g018800 | 21.831 | 426 | 261 | 15 | 71 | 456 | 98 | 491 | 6.84e-13 | 71.2 |
MS.gene036057.t1 | MTR_4g104610 | 20.445 | 494 | 324 | 18 | 3 | 455 | 1 | 466 | 6.93e-13 | 71.2 |
MS.gene036057.t1 | MTR_2g072340 | 20.776 | 438 | 304 | 13 | 70 | 484 | 98 | 515 | 8.01e-13 | 70.9 |
MS.gene036057.t1 | MTR_0171s0030 | 25.000 | 376 | 221 | 14 | 138 | 478 | 61 | 410 | 8.13e-13 | 70.5 |
MS.gene036057.t1 | MTR_6g008650 | 22.523 | 333 | 204 | 10 | 168 | 464 | 185 | 499 | 1.18e-12 | 70.5 |
MS.gene036057.t1 | MTR_5g018500 | 26.829 | 164 | 111 | 5 | 296 | 456 | 3 | 160 | 1.33e-12 | 67.0 |
MS.gene036057.t1 | MTR_7g075580 | 26.423 | 246 | 159 | 8 | 243 | 482 | 270 | 499 | 1.54e-12 | 70.1 |
MS.gene036057.t1 | MTR_6g084900 | 28.070 | 171 | 107 | 4 | 291 | 454 | 70 | 231 | 1.62e-12 | 68.2 |
MS.gene036057.t1 | MTR_6g035115 | 21.579 | 380 | 250 | 12 | 103 | 454 | 102 | 461 | 2.65e-12 | 69.3 |
MS.gene036057.t1 | MTR_6g008430 | 26.923 | 182 | 127 | 4 | 284 | 464 | 316 | 492 | 3.76e-12 | 68.9 |
MS.gene036057.t1 | MTR_4g071710 | 26.570 | 207 | 138 | 5 | 263 | 461 | 284 | 484 | 3.85e-12 | 68.9 |
MS.gene036057.t1 | MTR_3g025230 | 24.308 | 325 | 199 | 13 | 168 | 461 | 169 | 477 | 3.90e-12 | 68.9 |
MS.gene036057.t1 | MTR_1g107300 | 24.022 | 179 | 130 | 4 | 284 | 462 | 2 | 174 | 3.92e-12 | 66.2 |
MS.gene036057.t1 | MTR_7g075610 | 26.966 | 178 | 114 | 6 | 289 | 461 | 308 | 474 | 3.94e-12 | 68.6 |
MS.gene036057.t1 | MTR_4g089055 | 23.650 | 389 | 242 | 16 | 104 | 461 | 122 | 486 | 4.38e-12 | 68.6 |
MS.gene036057.t1 | MTR_2g061200 | 22.525 | 404 | 274 | 12 | 109 | 484 | 136 | 528 | 4.82e-12 | 68.6 |
MS.gene036057.t1 | MTR_4g062510 | 25.126 | 199 | 132 | 6 | 273 | 460 | 294 | 486 | 6.01e-12 | 68.2 |
MS.gene036057.t1 | MTR_5g070710 | 23.415 | 205 | 145 | 5 | 280 | 480 | 292 | 488 | 8.49e-12 | 67.8 |
MS.gene036057.t1 | MTR_6g022450 | 25.490 | 204 | 138 | 5 | 282 | 484 | 308 | 498 | 9.17e-12 | 67.8 |
MS.gene036057.t1 | MTR_5g070830 | 23.926 | 163 | 119 | 2 | 292 | 454 | 421 | 578 | 9.45e-12 | 67.8 |
MS.gene036057.t1 | MTR_6g084770 | 26.190 | 168 | 111 | 3 | 292 | 455 | 312 | 470 | 1.07e-11 | 67.4 |
MS.gene036057.t1 | MTR_4g094775 | 20.682 | 469 | 333 | 10 | 6 | 454 | 8 | 457 | 1.82e-11 | 66.6 |
MS.gene036057.t1 | MTR_5g095230 | 23.737 | 198 | 140 | 4 | 289 | 484 | 325 | 513 | 1.87e-11 | 66.6 |
MS.gene036057.t1 | MTR_5g070700 | 24.352 | 193 | 130 | 5 | 292 | 480 | 311 | 491 | 2.15e-11 | 66.2 |
MS.gene036057.t1 | MTR_8g469300 | 23.944 | 284 | 182 | 9 | 196 | 455 | 199 | 472 | 2.48e-11 | 66.2 |
MS.gene036057.t1 | MTR_6g008630 | 25.134 | 187 | 124 | 4 | 284 | 464 | 233 | 409 | 2.53e-11 | 65.9 |
MS.gene036057.t1 | MTR_2g072400 | 20.045 | 444 | 300 | 14 | 70 | 484 | 98 | 515 | 2.58e-11 | 66.2 |
MS.gene036057.t1 | MTR_3g014880 | 23.396 | 265 | 159 | 8 | 232 | 464 | 248 | 500 | 2.59e-11 | 66.2 |
MS.gene036057.t1 | MTR_1g107295 | 23.834 | 193 | 133 | 5 | 277 | 461 | 299 | 485 | 2.60e-11 | 66.2 |
MS.gene036057.t1 | MTR_7g012860 | 25.000 | 316 | 198 | 13 | 169 | 461 | 172 | 471 | 2.90e-11 | 65.9 |
MS.gene036057.t1 | MTR_0287s0060 | 25.000 | 316 | 198 | 13 | 169 | 461 | 172 | 471 | 2.90e-11 | 65.9 |
MS.gene036057.t1 | MTR_6g042610 | 24.468 | 188 | 137 | 3 | 284 | 470 | 316 | 499 | 2.97e-11 | 65.9 |
MS.gene036057.t1 | MTR_1g492820 | 21.008 | 476 | 322 | 18 | 12 | 455 | 29 | 482 | 4.50e-11 | 65.5 |
MS.gene036057.t1 | MTR_6g008600 | 25.287 | 174 | 114 | 4 | 289 | 456 | 330 | 493 | 4.51e-11 | 65.5 |
MS.gene036057.t1 | MTR_5g026520 | 23.828 | 256 | 182 | 6 | 238 | 485 | 258 | 508 | 6.12e-11 | 65.1 |
MS.gene036057.t1 | MTR_3g025260 | 24.308 | 325 | 199 | 13 | 168 | 461 | 169 | 477 | 6.24e-11 | 65.1 |
MS.gene036057.t1 | MTR_0638s0020 | 22.910 | 323 | 213 | 9 | 157 | 458 | 90 | 397 | 9.52e-11 | 64.3 |
MS.gene036057.t1 | MTR_3g436540 | 22.568 | 257 | 178 | 6 | 221 | 461 | 229 | 480 | 9.74e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036057.t1 | AT4G39500 | 40.351 | 513 | 267 | 7 | 4 | 486 | 14 | 517 | 4.88e-133 | 395 |
MS.gene036057.t1 | AT2G23180 | 38.491 | 517 | 281 | 6 | 1 | 485 | 1 | 512 | 5.95e-133 | 395 |
MS.gene036057.t1 | AT4G32170 | 40.430 | 512 | 271 | 7 | 1 | 486 | 1 | 504 | 2.83e-130 | 387 |
MS.gene036057.t1 | AT1G57750 | 37.769 | 511 | 279 | 7 | 1 | 486 | 1 | 497 | 9.18e-128 | 380 |
MS.gene036057.t1 | AT4G39500 | 40.842 | 475 | 247 | 5 | 38 | 486 | 1 | 467 | 6.26e-127 | 377 |
MS.gene036057.t1 | AT2G21910 | 40.116 | 516 | 272 | 9 | 1 | 487 | 1 | 508 | 1.18e-126 | 378 |
MS.gene036057.t1 | AT4G39490 | 38.372 | 516 | 273 | 9 | 11 | 487 | 9 | 518 | 1.23e-126 | 379 |
MS.gene036057.t1 | AT1G47620 | 38.050 | 523 | 280 | 7 | 1 | 486 | 1 | 516 | 6.93e-124 | 372 |
MS.gene036057.t1 | AT4G39510 | 39.845 | 517 | 269 | 9 | 1 | 486 | 1 | 506 | 4.80e-122 | 366 |
MS.gene036057.t1 | AT4G39480 | 38.314 | 522 | 280 | 8 | 1 | 487 | 1 | 515 | 1.62e-120 | 363 |
MS.gene036057.t1 | AT5G52320 | 38.494 | 478 | 257 | 6 | 32 | 484 | 36 | 501 | 7.76e-116 | 350 |
MS.gene036057.t1 | AT1G65340 | 37.967 | 482 | 261 | 7 | 29 | 484 | 33 | 502 | 1.66e-113 | 344 |
MS.gene036057.t1 | AT5G52320 | 38.055 | 473 | 256 | 6 | 32 | 479 | 36 | 496 | 1.97e-113 | 344 |
MS.gene036057.t1 | AT5G02900 | 38.372 | 516 | 252 | 12 | 1 | 486 | 1 | 480 | 4.33e-109 | 332 |
MS.gene036057.t1 | AT5G08250 | 35.521 | 518 | 288 | 8 | 4 | 487 | 37 | 542 | 1.04e-105 | 326 |
MS.gene036057.t1 | AT5G23190 | 34.175 | 515 | 300 | 7 | 4 | 487 | 36 | 542 | 4.66e-105 | 324 |
MS.gene036057.t1 | AT5G08250 | 35.976 | 492 | 269 | 8 | 30 | 487 | 1 | 480 | 7.10e-102 | 314 |
MS.gene036057.t1 | AT1G24540 | 34.879 | 496 | 273 | 10 | 25 | 485 | 40 | 520 | 1.37e-94 | 296 |
MS.gene036057.t1 | AT1G57750 | 34.932 | 438 | 246 | 7 | 1 | 413 | 1 | 424 | 5.18e-94 | 292 |
MS.gene036057.t1 | AT3G26125 | 33.605 | 491 | 287 | 7 | 32 | 487 | 48 | 534 | 5.79e-94 | 295 |
MS.gene036057.t1 | AT1G13140 | 32.851 | 484 | 290 | 7 | 33 | 487 | 49 | 526 | 1.71e-91 | 288 |
MS.gene036057.t1 | AT1G13140 | 33.262 | 466 | 286 | 6 | 33 | 487 | 49 | 500 | 4.30e-91 | 286 |
MS.gene036057.t1 | AT1G13150 | 33.265 | 487 | 284 | 9 | 33 | 487 | 42 | 519 | 1.38e-90 | 286 |
MS.gene036057.t1 | AT2G45970 | 33.265 | 490 | 278 | 11 | 33 | 485 | 33 | 510 | 7.75e-88 | 279 |
MS.gene036057.t1 | AT1G63710 | 33.608 | 485 | 280 | 10 | 33 | 485 | 33 | 507 | 2.01e-86 | 275 |
MS.gene036057.t1 | AT4G00360 | 33.060 | 487 | 284 | 10 | 33 | 485 | 33 | 511 | 2.73e-85 | 273 |
MS.gene036057.t1 | AT1G01600 | 32.314 | 523 | 300 | 13 | 1 | 485 | 7 | 513 | 1.90e-84 | 271 |
MS.gene036057.t1 | AT5G58860 | 31.526 | 498 | 304 | 9 | 15 | 485 | 21 | 508 | 3.30e-81 | 261 |
MS.gene036057.t1 | AT3G56630 | 33.122 | 474 | 289 | 12 | 32 | 485 | 33 | 498 | 2.23e-73 | 240 |
MS.gene036057.t1 | AT1G34540 | 32.272 | 471 | 296 | 8 | 32 | 485 | 33 | 497 | 2.81e-72 | 237 |
MS.gene036057.t1 | AT2G45510 | 31.569 | 510 | 298 | 15 | 10 | 485 | 16 | 508 | 3.41e-67 | 224 |
MS.gene036057.t1 | AT2G27690 | 31.742 | 419 | 262 | 8 | 77 | 482 | 76 | 483 | 7.01e-66 | 221 |
MS.gene036057.t1 | AT2G44890 | 32.645 | 484 | 279 | 14 | 34 | 486 | 42 | 509 | 1.92e-65 | 220 |
MS.gene036057.t1 | AT3G48520 | 28.600 | 507 | 317 | 8 | 10 | 485 | 7 | 499 | 3.52e-64 | 216 |
MS.gene036057.t1 | AT3G01900 | 30.085 | 472 | 297 | 9 | 32 | 485 | 34 | 490 | 9.18e-63 | 212 |
MS.gene036057.t1 | AT1G69500 | 28.492 | 537 | 318 | 11 | 3 | 486 | 1 | 524 | 2.08e-62 | 212 |
MS.gene036057.t1 | AT2G44890 | 31.875 | 480 | 270 | 14 | 34 | 486 | 42 | 491 | 1.39e-61 | 209 |
MS.gene036057.t1 | AT5G63450 | 31.481 | 432 | 260 | 9 | 77 | 485 | 84 | 502 | 2.25e-60 | 206 |
MS.gene036057.t1 | AT5G63450 | 31.481 | 432 | 260 | 9 | 77 | 485 | 142 | 560 | 7.08e-60 | 206 |
MS.gene036057.t1 | AT1G31800 | 24.297 | 498 | 322 | 19 | 18 | 486 | 99 | 570 | 2.91e-29 | 121 |
MS.gene036057.t1 | AT3G53130 | 22.601 | 469 | 289 | 18 | 57 | 485 | 105 | 539 | 1.40e-25 | 110 |
MS.gene036057.t1 | AT1G66030 | 34.118 | 170 | 94 | 4 | 1 | 160 | 1 | 162 | 5.77e-23 | 95.9 |
MS.gene036057.t1 | AT5G24900 | 23.256 | 430 | 282 | 11 | 82 | 483 | 116 | 525 | 4.47e-22 | 99.8 |
MS.gene036057.t1 | AT5G24900 | 23.239 | 426 | 279 | 11 | 85 | 482 | 2 | 407 | 6.91e-22 | 98.2 |
MS.gene036057.t1 | AT2G26710 | 23.899 | 477 | 304 | 15 | 35 | 480 | 62 | 510 | 3.61e-21 | 97.1 |
MS.gene036057.t1 | AT5G52400 | 22.449 | 441 | 311 | 11 | 52 | 480 | 93 | 514 | 1.56e-19 | 92.0 |
MS.gene036057.t1 | AT4G13770 | 21.739 | 368 | 254 | 8 | 115 | 461 | 116 | 470 | 8.59e-18 | 86.3 |
MS.gene036057.t1 | AT4G13310 | 26.421 | 299 | 170 | 9 | 162 | 433 | 165 | 440 | 1.64e-17 | 85.5 |
MS.gene036057.t1 | AT1G64940 | 26.222 | 225 | 155 | 5 | 263 | 485 | 293 | 508 | 7.32e-17 | 83.6 |
MS.gene036057.t1 | AT1G64950 | 25.333 | 225 | 157 | 4 | 263 | 485 | 292 | 507 | 1.74e-16 | 82.4 |
MS.gene036057.t1 | AT1G01280 | 21.739 | 414 | 277 | 15 | 73 | 455 | 73 | 470 | 4.71e-16 | 81.3 |
MS.gene036057.t1 | AT2G46950 | 25.229 | 218 | 152 | 4 | 263 | 480 | 359 | 565 | 4.76e-16 | 81.3 |
MS.gene036057.t1 | AT5G57260 | 25.137 | 366 | 232 | 14 | 122 | 461 | 122 | 471 | 4.86e-16 | 80.9 |
MS.gene036057.t1 | AT3G14660 | 22.887 | 485 | 290 | 19 | 21 | 458 | 38 | 485 | 5.51e-16 | 80.9 |
MS.gene036057.t1 | AT4G27710 | 27.586 | 232 | 156 | 6 | 250 | 480 | 292 | 512 | 6.69e-16 | 80.5 |
MS.gene036057.t1 | AT4G31500 | 21.844 | 499 | 322 | 18 | 1 | 461 | 1 | 469 | 1.33e-15 | 79.7 |
MS.gene036057.t1 | AT2G30770 | 29.480 | 173 | 118 | 3 | 289 | 461 | 299 | 467 | 2.03e-15 | 79.0 |
MS.gene036057.t1 | AT5G24910 | 22.145 | 429 | 293 | 13 | 82 | 485 | 120 | 532 | 3.31e-15 | 78.6 |
MS.gene036057.t1 | AT4G13290 | 24.267 | 375 | 239 | 17 | 75 | 433 | 88 | 433 | 8.47e-15 | 77.0 |
MS.gene036057.t1 | AT4G37320 | 23.967 | 363 | 222 | 13 | 142 | 474 | 146 | 484 | 1.13e-14 | 76.6 |
MS.gene036057.t1 | AT3G48300 | 21.981 | 414 | 256 | 14 | 87 | 480 | 111 | 477 | 1.49e-14 | 76.3 |
MS.gene036057.t1 | AT3G03470 | 26.957 | 230 | 153 | 6 | 264 | 485 | 287 | 509 | 1.50e-14 | 76.3 |
MS.gene036057.t1 | AT3G48300 | 21.981 | 414 | 256 | 14 | 87 | 480 | 113 | 479 | 1.50e-14 | 76.3 |
MS.gene036057.t1 | AT3G25180 | 28.415 | 183 | 125 | 5 | 282 | 464 | 307 | 483 | 1.58e-14 | 76.3 |
MS.gene036057.t1 | AT2G46960 | 27.064 | 218 | 147 | 5 | 264 | 480 | 306 | 512 | 1.91e-14 | 76.3 |
MS.gene036057.t1 | AT2G46960 | 27.461 | 193 | 133 | 4 | 289 | 480 | 210 | 396 | 2.08e-14 | 75.5 |
MS.gene036057.t1 | AT3G26830 | 24.138 | 348 | 221 | 12 | 131 | 454 | 133 | 461 | 3.81e-14 | 75.1 |
MS.gene036057.t1 | AT2G12190 | 23.643 | 258 | 178 | 6 | 238 | 485 | 261 | 509 | 4.10e-14 | 75.1 |
MS.gene036057.t1 | AT3G26280 | 23.967 | 363 | 227 | 10 | 122 | 454 | 141 | 484 | 4.61e-14 | 74.7 |
MS.gene036057.t1 | AT3G26280 | 23.967 | 363 | 227 | 10 | 122 | 454 | 124 | 467 | 5.20e-14 | 74.7 |
MS.gene036057.t1 | AT4G37340 | 22.687 | 335 | 217 | 10 | 140 | 454 | 143 | 455 | 5.67e-14 | 74.7 |
MS.gene036057.t1 | AT3G61040 | 30.108 | 186 | 115 | 6 | 276 | 454 | 283 | 460 | 5.95e-14 | 74.3 |
MS.gene036057.t1 | AT3G26330 | 22.727 | 374 | 227 | 12 | 122 | 461 | 123 | 468 | 1.02e-13 | 73.9 |
MS.gene036057.t1 | AT4G37370 | 24.501 | 351 | 226 | 13 | 140 | 468 | 143 | 476 | 1.09e-13 | 73.6 |
MS.gene036057.t1 | AT5G38450 | 28.365 | 208 | 133 | 6 | 274 | 480 | 319 | 511 | 1.76e-13 | 73.2 |
MS.gene036057.t1 | AT1G67110 | 27.885 | 208 | 134 | 6 | 274 | 480 | 313 | 505 | 1.91e-13 | 72.8 |
MS.gene036057.t1 | AT3G48270 | 25.294 | 170 | 114 | 3 | 289 | 454 | 292 | 452 | 2.03e-13 | 72.8 |
MS.gene036057.t1 | AT3G20140 | 24.793 | 363 | 213 | 14 | 150 | 479 | 163 | 498 | 2.48e-13 | 72.4 |
MS.gene036057.t1 | AT1G13100 | 22.324 | 327 | 217 | 10 | 153 | 454 | 147 | 461 | 3.06e-13 | 72.4 |
MS.gene036057.t1 | AT3G48310 | 21.351 | 459 | 284 | 20 | 31 | 454 | 37 | 453 | 4.24e-13 | 71.6 |
MS.gene036057.t1 | AT5G35715 | 24.924 | 329 | 204 | 14 | 153 | 454 | 88 | 400 | 1.81e-12 | 69.7 |
MS.gene036057.t1 | AT5G24950 | 25.339 | 221 | 148 | 5 | 243 | 455 | 250 | 461 | 2.00e-12 | 69.7 |
MS.gene036057.t1 | AT3G26270 | 24.485 | 388 | 242 | 16 | 98 | 454 | 99 | 466 | 2.04e-12 | 69.7 |
MS.gene036057.t1 | AT1G33720 | 22.930 | 471 | 288 | 17 | 31 | 461 | 43 | 478 | 2.51e-12 | 69.3 |
MS.gene036057.t1 | AT3G26210 | 21.644 | 365 | 237 | 13 | 153 | 485 | 153 | 500 | 2.76e-12 | 69.3 |
MS.gene036057.t1 | AT2G22330 | 27.586 | 174 | 120 | 5 | 282 | 454 | 332 | 500 | 3.50e-12 | 68.9 |
MS.gene036057.t1 | AT1G64900 | 25.591 | 254 | 171 | 7 | 238 | 486 | 265 | 505 | 3.87e-12 | 68.9 |
MS.gene036057.t1 | AT1G33730 | 27.933 | 179 | 111 | 5 | 289 | 461 | 176 | 342 | 3.89e-12 | 68.2 |
MS.gene036057.t1 | AT1G33730 | 27.933 | 179 | 111 | 5 | 289 | 461 | 176 | 342 | 3.89e-12 | 68.2 |
MS.gene036057.t1 | AT2G22330 | 27.586 | 174 | 120 | 5 | 282 | 454 | 355 | 523 | 3.93e-12 | 68.9 |
MS.gene036057.t1 | AT1G01190 | 28.125 | 192 | 126 | 7 | 288 | 474 | 337 | 521 | 4.58e-12 | 68.6 |
MS.gene036057.t1 | AT1G01190 | 28.125 | 192 | 126 | 7 | 288 | 474 | 332 | 516 | 5.51e-12 | 68.6 |
MS.gene036057.t1 | AT3G14660 | 26.471 | 204 | 126 | 6 | 269 | 466 | 162 | 347 | 8.34e-12 | 67.0 |
MS.gene036057.t1 | AT4G39950 | 26.437 | 174 | 122 | 4 | 282 | 454 | 330 | 498 | 1.40e-11 | 67.0 |
MS.gene036057.t1 | AT4G31940 | 26.522 | 230 | 158 | 6 | 238 | 464 | 273 | 494 | 1.43e-11 | 67.0 |
MS.gene036057.t1 | AT1G13080 | 24.242 | 264 | 169 | 9 | 219 | 461 | 101 | 354 | 1.44e-11 | 66.6 |
MS.gene036057.t1 | AT2G30750 | 27.315 | 216 | 147 | 6 | 243 | 454 | 251 | 460 | 1.45e-11 | 67.0 |
MS.gene036057.t1 | AT4G39950 | 26.437 | 174 | 122 | 4 | 282 | 454 | 370 | 538 | 1.52e-11 | 67.0 |
MS.gene036057.t1 | AT3G26160 | 27.439 | 164 | 102 | 6 | 278 | 433 | 290 | 444 | 1.66e-11 | 67.0 |
MS.gene036057.t1 | AT2G45570 | 24.093 | 386 | 234 | 14 | 115 | 461 | 114 | 479 | 1.91e-11 | 66.6 |
MS.gene036057.t1 | AT5G05260 | 22.946 | 353 | 234 | 12 | 115 | 454 | 129 | 456 | 2.01e-11 | 66.6 |
MS.gene036057.t1 | AT3G14630 | 21.795 | 390 | 234 | 13 | 113 | 466 | 135 | 489 | 2.05e-11 | 66.6 |
MS.gene036057.t1 | AT5G25120 | 20.613 | 359 | 257 | 9 | 122 | 464 | 121 | 467 | 2.66e-11 | 66.2 |
MS.gene036057.t1 | AT5G10610 | 25.389 | 193 | 136 | 4 | 275 | 467 | 286 | 470 | 2.70e-11 | 66.2 |
MS.gene036057.t1 | AT3G14630 | 21.795 | 390 | 234 | 13 | 113 | 466 | 190 | 544 | 3.30e-11 | 65.9 |
MS.gene036057.t1 | AT1G13080 | 24.242 | 264 | 169 | 9 | 219 | 461 | 219 | 472 | 3.35e-11 | 65.9 |
MS.gene036057.t1 | AT3G28740 | 25.620 | 242 | 151 | 8 | 234 | 460 | 242 | 469 | 4.96e-11 | 65.5 |
MS.gene036057.t1 | AT3G26300 | 23.014 | 365 | 243 | 11 | 122 | 464 | 123 | 471 | 5.05e-11 | 65.5 |
MS.gene036057.t1 | AT3G26310 | 24.046 | 262 | 166 | 8 | 221 | 461 | 218 | 467 | 5.37e-11 | 65.1 |
MS.gene036057.t1 | AT4G37430 | 21.169 | 496 | 322 | 17 | 16 | 475 | 18 | 480 | 6.23e-11 | 65.1 |
MS.gene036057.t1 | AT1G50560 | 26.106 | 226 | 142 | 8 | 268 | 479 | 291 | 505 | 6.34e-11 | 65.1 |
MS.gene036057.t1 | AT1G33720 | 25.434 | 173 | 123 | 4 | 289 | 461 | 180 | 346 | 6.46e-11 | 64.3 |
MS.gene036057.t1 | AT1G33720 | 25.434 | 173 | 123 | 4 | 289 | 461 | 180 | 346 | 6.46e-11 | 64.3 |
MS.gene036057.t1 | AT1G33720 | 25.434 | 173 | 123 | 4 | 289 | 461 | 180 | 346 | 6.46e-11 | 64.3 |
MS.gene036057.t1 | AT4G15380 | 24.031 | 258 | 179 | 7 | 229 | 480 | 253 | 499 | 6.66e-11 | 65.1 |
MS.gene036057.t1 | AT4G15350 | 26.699 | 206 | 137 | 7 | 289 | 487 | 306 | 504 | 7.97e-11 | 64.7 |
MS.gene036057.t1 | AT2G23220 | 21.856 | 334 | 230 | 8 | 140 | 459 | 159 | 475 | 8.41e-11 | 64.7 |
MS.gene036057.t1 | AT4G37310 | 22.903 | 310 | 206 | 9 | 152 | 439 | 154 | 452 | 8.60e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCATCTGCATTATTGTATT+TGG | 0.098646 | 1.4:+56557203 | MS.gene036057:CDS |
TCTGATCTCTTGAATAATTT+TGG | 0.120978 | 1.4:-56557664 | None:intergenic |
CTAAGATCACTAATCTTATT+TGG | 0.151101 | 1.4:-56557245 | None:intergenic |
GAGTAAATTAACTTGGTATT+TGG | 0.194985 | 1.4:-56557861 | None:intergenic |
ACTTCATTCCTAGTTGTTTA+TGG | 0.198813 | 1.4:+56557324 | MS.gene036057:CDS |
TATTTGGATTTGATCCTAAT+TGG | 0.230599 | 1.4:+56557219 | MS.gene036057:CDS |
GCGATGTGGTTAACGTTTAT+TGG | 0.238352 | 1.4:-56556906 | None:intergenic |
TGGGAAGGATGGAACAAATA+TGG | 0.242158 | 1.4:+56557895 | MS.gene036057:CDS |
ATCTTATTTGGAAGCCAATT+AGG | 0.275411 | 1.4:-56557233 | None:intergenic |
CACATCGCAAGCAAGAATTT+TGG | 0.283007 | 1.4:+56556921 | MS.gene036057:CDS |
TCTTTACTCATACAACTTCT+AGG | 0.304477 | 1.4:-56558017 | None:intergenic |
TCTTCATTTACATCTACTAT+TGG | 0.341938 | 1.4:+56556706 | MS.gene036057:CDS |
TCAGATACATCATTAATAAA+TGG | 0.345893 | 1.4:-56557128 | None:intergenic |
ACAGAAGCCCTAGGGGTTAC+AGG | 0.354307 | 1.4:-56558116 | None:intergenic |
TCCTCTTCTCTTTCCATACA+TGG | 0.366109 | 1.4:-56557019 | None:intergenic |
AATTTACTCTTTGTATGCTA+TGG | 0.370405 | 1.4:+56557875 | MS.gene036057:CDS |
CTCCATGACGTTTCAAAACT+AGG | 0.378664 | 1.4:-56556824 | None:intergenic |
GGGAAGGATGGAACAAATAT+GGG | 0.382754 | 1.4:+56557896 | MS.gene036057:CDS |
CTGCAGAAATGGTTTCTTGT+TGG | 0.391077 | 1.4:+56557350 | MS.gene036057:CDS |
TCAATTCTGATTCCCATGTA+TGG | 0.406666 | 1.4:+56557006 | MS.gene036057:CDS |
GTGCATCACAACATGAGAAT+TGG | 0.410239 | 1.4:+56557694 | MS.gene036057:CDS |
AAGTTCATAGCTTTCAATAC+AGG | 0.418468 | 1.4:+56557993 | MS.gene036057:CDS |
CTCTCCACTAGGTAGTATAT+CGG | 0.419404 | 1.4:-56557829 | None:intergenic |
TGGTTGCAGCTGCCTTGTTA+TGG | 0.421111 | 1.4:+56558063 | MS.gene036057:CDS |
GTTTATGGAAGCTGCAGAAA+TGG | 0.422474 | 1.4:+56557339 | MS.gene036057:CDS |
GTGCAGCAGCAGTGAAGAAA+TGG | 0.426826 | 1.4:+56557463 | MS.gene036057:CDS |
AAAATCTCTTATTGTGATAG+AGG | 0.429045 | 1.4:+56557283 | MS.gene036057:CDS |
GGAGGAACGTTTCGATTTGA+AGG | 0.431858 | 1.4:+56556843 | MS.gene036057:CDS |
GTTATGGAAGTTTCACATAC+AGG | 0.433937 | 1.4:+56558079 | MS.gene036057:CDS |
CATCATTAATAAATGGTAGT+AGG | 0.441729 | 1.4:-56557121 | None:intergenic |
GCAGTGAGATTATGCCGAAT+TGG | 0.443620 | 1.4:+56556739 | MS.gene036057:CDS |
TGTTTCATTCAATTCTCAAA+AGG | 0.451412 | 1.4:+56557045 | MS.gene036057:CDS |
TTACACTTTCATACAAGAAT+CGG | 0.453389 | 1.4:-56557412 | None:intergenic |
GTTTCAAAACTAGGGTGAAA+TGG | 0.457269 | 1.4:-56556815 | None:intergenic |
TCGAATGAAACATGGCTTGA+AGG | 0.466524 | 1.4:+56558145 | MS.gene036057:CDS |
ACTTGCAAGATATCTTGAAT+AGG | 0.468493 | 1.4:+56557168 | MS.gene036057:CDS |
CACTTAGTTCAAGTCTCAGT+TGG | 0.468578 | 1.4:+56557604 | MS.gene036057:CDS |
ATACCAACTATCGGCCAATT+CGG | 0.470840 | 1.4:-56556753 | None:intergenic |
CTCTCTGATACCCATCTCTC+AGG | 0.476597 | 1.4:-56557942 | None:intergenic |
ATTAATGATGTATCTGAAGC+AGG | 0.478589 | 1.4:+56557134 | MS.gene036057:CDS |
AAAGCTTGTGTTTGTGAACC+AGG | 0.479518 | 1.4:-56556868 | None:intergenic |
ATGCCGAATTGGCCGATAGT+TGG | 0.480925 | 1.4:+56556750 | MS.gene036057:CDS |
TAGTTTCATTCAAATGAAGA+TGG | 0.482291 | 1.4:+56558043 | MS.gene036057:CDS |
ATTTACTCTTTGTATGCTAT+GGG | 0.482323 | 1.4:+56557876 | MS.gene036057:CDS |
TGCATGATTCAATGTATTGA+AGG | 0.487169 | 1.4:+56556666 | MS.gene036057:CDS |
CCTCTTCTCTTTCCATACAT+GGG | 0.487601 | 1.4:-56557018 | None:intergenic |
AGTAGATGTAAATGAAGAAG+AGG | 0.496608 | 1.4:-56556701 | None:intergenic |
TCAAGCCATGTTTCATTCGA+AGG | 0.511506 | 1.4:-56558142 | None:intergenic |
TAGAGGAAGTGCTATTCTAC+AGG | 0.520423 | 1.4:+56557300 | MS.gene036057:CDS |
TGAGAATTGGATAACTTCAA+TGG | 0.520544 | 1.4:+56557707 | MS.gene036057:CDS |
TCCATGACGTTTCAAAACTA+GGG | 0.521163 | 1.4:-56556823 | None:intergenic |
GGAATTTAAGCCTGAGAGAT+GGG | 0.521678 | 1.4:+56557932 | MS.gene036057:CDS |
CTTTGTAAAAGCACTGATGA+AGG | 0.527955 | 1.4:+56557502 | MS.gene036057:CDS |
TGTTTCAACTCATCCTATTG+TGG | 0.531424 | 1.4:+56557638 | MS.gene036057:CDS |
GAAGTTTCACATACAGGTGG+TGG | 0.531835 | 1.4:+56558085 | MS.gene036057:CDS |
ATTGCATTGATAAGCTCAAA+CGG | 0.540179 | 1.4:-56557801 | None:intergenic |
CAGAAGCCCTAGGGGTTACA+GGG | 0.544544 | 1.4:-56558115 | None:intergenic |
CCCATGTATGGAAAGAGAAG+AGG | 0.545701 | 1.4:+56557018 | MS.gene036057:CDS |
TGGAATTTAAGCCTGAGAGA+TGG | 0.546234 | 1.4:+56557931 | MS.gene036057:CDS |
TTTGTATGCTATGGGAAGGA+TGG | 0.548102 | 1.4:+56557884 | MS.gene036057:CDS |
AAGGTCACCCTGTAACCCCT+AGG | 0.554777 | 1.4:+56558108 | MS.gene036057:CDS |
AAAGCTATGAACTTGTAAGA+TGG | 0.556387 | 1.4:-56557984 | None:intergenic |
CGAAGGACAACAGAAGCCCT+AGG | 0.558935 | 1.4:-56558125 | None:intergenic |
CGTTTCGATTTGAAGGACCC+TGG | 0.559229 | 1.4:+56556850 | MS.gene036057:CDS |
GTAAAAGCACTGATGAAGGA+AGG | 0.563972 | 1.4:+56557506 | MS.gene036057:CDS |
GGAGGTAGACTAGCTTATCA+AGG | 0.564942 | 1.4:-56557737 | None:intergenic |
TGCAGCTTCCATAAACAACT+AGG | 0.568802 | 1.4:-56557332 | None:intergenic |
ATACAAAGAGTAAATTAACT+TGG | 0.571875 | 1.4:-56557868 | None:intergenic |
ACTCTTTGTATGCTATGGGA+AGG | 0.574932 | 1.4:+56557880 | MS.gene036057:CDS |
GTTGTCCTTCGAATGAAACA+TGG | 0.578856 | 1.4:+56558137 | MS.gene036057:CDS |
ATAAGCTCAAACGGTACAGT+AGG | 0.578870 | 1.4:-56557792 | None:intergenic |
GAAGGACAACAGAAGCCCTA+GGG | 0.583414 | 1.4:-56558124 | None:intergenic |
GACAGTAGCATACCAACTAT+CGG | 0.590717 | 1.4:-56556762 | None:intergenic |
GATAAGCTAGTCTACCTCCA+TGG | 0.593821 | 1.4:+56557741 | MS.gene036057:CDS |
TACAGTAGGATACAGCCTCA+TGG | 0.605392 | 1.4:-56557778 | None:intergenic |
TGGATTCACATATAGCTCCA+TGG | 0.609113 | 1.4:-56557758 | None:intergenic |
GAAACATGGCTTGAAGGTCA+AGG | 0.612274 | 1.4:+56558151 | MS.gene036057:CDS |
GATAGTTGGTATGCTACTGT+CGG | 0.614295 | 1.4:+56556764 | MS.gene036057:CDS |
GAGAGATGGGTATCAGAGAG+AGG | 0.617792 | 1.4:+56557945 | MS.gene036057:CDS |
AGGTCACCCTGTAACCCCTA+GGG | 0.618514 | 1.4:+56558109 | MS.gene036057:CDS |
ATCTACTATTGGCGACACAA+TGG | 0.620970 | 1.4:+56556717 | MS.gene036057:CDS |
TGGTCAAGAAAAGAAGTACA+AGG | 0.628979 | 1.4:+56557370 | MS.gene036057:CDS |
AATATGGGGAGAAGACTGCA+TGG | 0.631048 | 1.4:+56557911 | MS.gene036057:CDS |
GGAAGGATGGAACAAATATG+GGG | 0.639334 | 1.4:+56557897 | MS.gene036057:CDS |
TTTCACATACAGGTGGTGGA+AGG | 0.639771 | 1.4:+56558089 | MS.gene036057:CDS |
CAAAATTCTTGCTTGCGATG+TGG | 0.640167 | 1.4:-56556920 | None:intergenic |
AAGCTTGTGTTTGTGAACCA+GGG | 0.641414 | 1.4:-56556867 | None:intergenic |
GGACTAACATTCTCTCCACT+AGG | 0.648789 | 1.4:-56557840 | None:intergenic |
ATCTGAAGCAGGTACTGAGG+TGG | 0.648911 | 1.4:+56557145 | MS.gene036057:CDS |
AAATCCGATATACTACCTAG+TGG | 0.664104 | 1.4:+56557825 | MS.gene036057:CDS |
ATGGAAGTTTCACATACAGG+TGG | 0.670752 | 1.4:+56558082 | MS.gene036057:CDS |
TATGTGAAACTTCCATAACA+AGG | 0.681788 | 1.4:-56558075 | None:intergenic |
GAATTGGATAACTTCAATGG+CGG | 0.705429 | 1.4:+56557710 | MS.gene036057:CDS |
AAGGACAACAGAAGCCCTAG+GGG | 0.719502 | 1.4:-56558123 | None:intergenic |
TGTATCTGAAGCAGGTACTG+AGG | 0.743513 | 1.4:+56557142 | MS.gene036057:CDS |
GAGCTATATGTGAATCCATG+AGG | 0.761271 | 1.4:+56557763 | MS.gene036057:CDS |
ATTCACATATAGCTCCATGG+AGG | 0.774024 | 1.4:-56557755 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAAAATTCAAAAATTTCT+TGG | - | chr1.4:56556974-56556993 | None:intergenic | 15.0% |
!!! | CAAGAAATTTTTGAATTTTT+TGG | + | chr1.4:56556972-56556991 | MS.gene036057:CDS | 15.0% |
!! | ATACAAAGAGTAAATTAACT+TGG | - | chr1.4:56557871-56557890 | None:intergenic | 20.0% |
!! | TCAGATACATCATTAATAAA+TGG | - | chr1.4:56557131-56557150 | None:intergenic | 20.0% |
!!! | GAAATTTTTGAATTTTTTGG+AGG | + | chr1.4:56556975-56556994 | MS.gene036057:CDS | 20.0% |
! | AAAATCTCTTATTGTGATAG+AGG | + | chr1.4:56557283-56557302 | MS.gene036057:CDS | 25.0% |
! | AATTTACTCTTTGTATGCTA+TGG | + | chr1.4:56557875-56557894 | MS.gene036057:CDS | 25.0% |
! | ATTTACTCTTTGTATGCTAT+GGG | + | chr1.4:56557876-56557895 | MS.gene036057:CDS | 25.0% |
! | CATCATTAATAAATGGTAGT+AGG | - | chr1.4:56557124-56557143 | None:intergenic | 25.0% |
! | CTAAGATCACTAATCTTATT+TGG | - | chr1.4:56557248-56557267 | None:intergenic | 25.0% |
! | TAGTTTCATTCAAATGAAGA+TGG | + | chr1.4:56558043-56558062 | MS.gene036057:CDS | 25.0% |
! | TATTTGGATTTGATCCTAAT+TGG | + | chr1.4:56557219-56557238 | MS.gene036057:CDS | 25.0% |
! | TCTTCATTTACATCTACTAT+TGG | + | chr1.4:56556706-56556725 | MS.gene036057:CDS | 25.0% |
! | TGTTTCATTCAATTCTCAAA+AGG | + | chr1.4:56557045-56557064 | MS.gene036057:CDS | 25.0% |
! | TTACACTTTCATACAAGAAT+CGG | - | chr1.4:56557415-56557434 | None:intergenic | 25.0% |
!! | GAGTAAATTAACTTGGTATT+TGG | - | chr1.4:56557864-56557883 | None:intergenic | 25.0% |
!! | TCTGATCTCTTGAATAATTT+TGG | - | chr1.4:56557667-56557686 | None:intergenic | 25.0% |
!!! | ATTTTTGAATTTTTTGGAGG+TGG | + | chr1.4:56556978-56556997 | MS.gene036057:CDS | 25.0% |
AAAGCTATGAACTTGTAAGA+TGG | - | chr1.4:56557987-56558006 | None:intergenic | 30.0% | |
AAGTTCATAGCTTTCAATAC+AGG | + | chr1.4:56557993-56558012 | MS.gene036057:CDS | 30.0% | |
ACTTCATTCCTAGTTGTTTA+TGG | + | chr1.4:56557324-56557343 | MS.gene036057:CDS | 30.0% | |
ACTTGCAAGATATCTTGAAT+AGG | + | chr1.4:56557168-56557187 | MS.gene036057:CDS | 30.0% | |
AGCATCTGCATTATTGTATT+TGG | + | chr1.4:56557203-56557222 | MS.gene036057:CDS | 30.0% | |
AGTAGATGTAAATGAAGAAG+AGG | - | chr1.4:56556704-56556723 | None:intergenic | 30.0% | |
TATGTGAAACTTCCATAACA+AGG | - | chr1.4:56558078-56558097 | None:intergenic | 30.0% | |
TCTTTACTCATACAACTTCT+AGG | - | chr1.4:56558020-56558039 | None:intergenic | 30.0% | |
TGAGAATTGGATAACTTCAA+TGG | + | chr1.4:56557707-56557726 | MS.gene036057:CDS | 30.0% | |
TGCATGATTCAATGTATTGA+AGG | + | chr1.4:56556666-56556685 | MS.gene036057:CDS | 30.0% | |
! | ATCTTATTTGGAAGCCAATT+AGG | - | chr1.4:56557236-56557255 | None:intergenic | 30.0% |
! | ATTAATGATGTATCTGAAGC+AGG | + | chr1.4:56557134-56557153 | MS.gene036057:CDS | 30.0% |
! | ATTGCATTGATAAGCTCAAA+CGG | - | chr1.4:56557804-56557823 | None:intergenic | 30.0% |
!!! | ATAATTTTGGCTTCCACAAT+AGG | - | chr1.4:56557654-56557673 | None:intergenic | 30.0% |
!!! | GCTTTTTTTGACTAGTTTGT+TGG | - | chr1.4:56557091-56557110 | None:intergenic | 30.0% |
AAATCCGATATACTACCTAG+TGG | + | chr1.4:56557825-56557844 | MS.gene036057:CDS | 35.0% | |
GAATTGGATAACTTCAATGG+CGG | + | chr1.4:56557710-56557729 | MS.gene036057:CDS | 35.0% | |
GTTATGGAAGTTTCACATAC+AGG | + | chr1.4:56558079-56558098 | MS.gene036057:CDS | 35.0% | |
GTTTCAAAACTAGGGTGAAA+TGG | - | chr1.4:56556818-56556837 | None:intergenic | 35.0% | |
TCAATTCTGATTCCCATGTA+TGG | + | chr1.4:56557006-56557025 | MS.gene036057:CDS | 35.0% | |
TCCATGACGTTTCAAAACTA+GGG | - | chr1.4:56556826-56556845 | None:intergenic | 35.0% | |
TGTTTCAACTCATCCTATTG+TGG | + | chr1.4:56557638-56557657 | MS.gene036057:CDS | 35.0% | |
! | TCTCTTTTGTTAGCAGGTAA+TGG | + | chr1.4:56557579-56557598 | MS.gene036057:intron | 35.0% |
! | TGGTCAAGAAAAGAAGTACA+AGG | + | chr1.4:56557370-56557389 | MS.gene036057:CDS | 35.0% |
!! | AGCAAGAATTTTGGCAACTA+CGG | + | chr1.4:56556930-56556949 | MS.gene036057:CDS | 35.0% |
!! | CTTTGTAAAAGCACTGATGA+AGG | + | chr1.4:56557502-56557521 | MS.gene036057:CDS | 35.0% |
AAAGCTTGTGTTTGTGAACC+AGG | - | chr1.4:56556871-56556890 | None:intergenic | 40.0% | |
AAGCTTGTGTTTGTGAACCA+GGG | - | chr1.4:56556870-56556889 | None:intergenic | 40.0% | |
ACTCTTTGTATGCTATGGGA+AGG | + | chr1.4:56557880-56557899 | MS.gene036057:CDS | 40.0% | |
ATAAGCTCAAACGGTACAGT+AGG | - | chr1.4:56557795-56557814 | None:intergenic | 40.0% | |
ATACCAACTATCGGCCAATT+CGG | - | chr1.4:56556756-56556775 | None:intergenic | 40.0% | |
ATCTACTATTGGCGACACAA+TGG | + | chr1.4:56556717-56556736 | MS.gene036057:CDS | 40.0% | |
ATGGAAGTTTCACATACAGG+TGG | + | chr1.4:56558082-56558101 | MS.gene036057:CDS | 40.0% | |
ATTCACATATAGCTCCATGG+AGG | - | chr1.4:56557758-56557777 | None:intergenic | 40.0% | |
CAAAATTCTTGCTTGCGATG+TGG | - | chr1.4:56556923-56556942 | None:intergenic | 40.0% | |
CACTTAGTTCAAGTCTCAGT+TGG | + | chr1.4:56557604-56557623 | MS.gene036057:CDS | 40.0% | |
CCTCTTCTCTTTCCATACAT+GGG | - | chr1.4:56557021-56557040 | None:intergenic | 40.0% | |
CTCCATGACGTTTCAAAACT+AGG | - | chr1.4:56556827-56556846 | None:intergenic | 40.0% | |
CTCTCCACTAGGTAGTATAT+CGG | - | chr1.4:56557832-56557851 | None:intergenic | 40.0% | |
CTGCAGAAATGGTTTCTTGT+TGG | + | chr1.4:56557350-56557369 | MS.gene036057:CDS | 40.0% | |
GACAGTAGCATACCAACTAT+CGG | - | chr1.4:56556765-56556784 | None:intergenic | 40.0% | |
GAGCTATATGTGAATCCATG+AGG | + | chr1.4:56557763-56557782 | MS.gene036057:CDS | 40.0% | |
GCGATGTGGTTAACGTTTAT+TGG | - | chr1.4:56556909-56556928 | None:intergenic | 40.0% | |
GGAAGGATGGAACAAATATG+GGG | + | chr1.4:56557897-56557916 | MS.gene036057:CDS | 40.0% | |
GGAATTTAAGCCTGAGAGAT+GGG | + | chr1.4:56557932-56557951 | MS.gene036057:CDS | 40.0% | |
GGGAAGGATGGAACAAATAT+GGG | + | chr1.4:56557896-56557915 | MS.gene036057:CDS | 40.0% | |
GTGCATCACAACATGAGAAT+TGG | + | chr1.4:56557694-56557713 | MS.gene036057:CDS | 40.0% | |
GTTGTCCTTCGAATGAAACA+TGG | + | chr1.4:56558137-56558156 | MS.gene036057:CDS | 40.0% | |
GTTTATGGAAGCTGCAGAAA+TGG | + | chr1.4:56557339-56557358 | MS.gene036057:CDS | 40.0% | |
TCAAGCCATGTTTCATTCGA+AGG | - | chr1.4:56558145-56558164 | None:intergenic | 40.0% | |
TCCTCTTCTCTTTCCATACA+TGG | - | chr1.4:56557022-56557041 | None:intergenic | 40.0% | |
TCGAATGAAACATGGCTTGA+AGG | + | chr1.4:56558145-56558164 | MS.gene036057:CDS | 40.0% | |
TGCAGCTTCCATAAACAACT+AGG | - | chr1.4:56557335-56557354 | None:intergenic | 40.0% | |
TGGAATTTAAGCCTGAGAGA+TGG | + | chr1.4:56557931-56557950 | MS.gene036057:CDS | 40.0% | |
TGGATTCACATATAGCTCCA+TGG | - | chr1.4:56557761-56557780 | None:intergenic | 40.0% | |
TGGGAAGGATGGAACAAATA+TGG | + | chr1.4:56557895-56557914 | MS.gene036057:CDS | 40.0% | |
TTTGTATGCTATGGGAAGGA+TGG | + | chr1.4:56557884-56557903 | MS.gene036057:CDS | 40.0% | |
! | CACATCGCAAGCAAGAATTT+TGG | + | chr1.4:56556921-56556940 | MS.gene036057:CDS | 40.0% |
! | GATAGTTGGTATGCTACTGT+CGG | + | chr1.4:56556764-56556783 | MS.gene036057:CDS | 40.0% |
!! | GCAAGAATTTTGGCAACTAC+GGG | + | chr1.4:56556931-56556950 | MS.gene036057:CDS | 40.0% |
!! | GTAAAAGCACTGATGAAGGA+AGG | + | chr1.4:56557506-56557525 | MS.gene036057:CDS | 40.0% |
!! | TAGAGGAAGTGCTATTCTAC+AGG | + | chr1.4:56557300-56557319 | MS.gene036057:CDS | 40.0% |
!!! | ACCCTAGTTTTGAAACGTCA+TGG | + | chr1.4:56556822-56556841 | MS.gene036057:CDS | 40.0% |
!!! | CAAGTCTCAGTTGGTTTTTC+TGG | + | chr1.4:56557613-56557632 | MS.gene036057:CDS | 40.0% |
!!! | CTAGTTTTGAAACGTCATGG+AGG | + | chr1.4:56556825-56556844 | MS.gene036057:CDS | 40.0% |
AATATGGGGAGAAGACTGCA+TGG | + | chr1.4:56557911-56557930 | MS.gene036057:CDS | 45.0% | |
CCCATGTATGGAAAGAGAAG+AGG | + | chr1.4:56557018-56557037 | MS.gene036057:CDS | 45.0% | |
GAAACATGGCTTGAAGGTCA+AGG | + | chr1.4:56558151-56558170 | MS.gene036057:CDS | 45.0% | |
GAAGTTTCACATACAGGTGG+TGG | + | chr1.4:56558085-56558104 | MS.gene036057:CDS | 45.0% | |
GCAGTGAGATTATGCCGAAT+TGG | + | chr1.4:56556739-56556758 | MS.gene036057:CDS | 45.0% | |
GGACTAACATTCTCTCCACT+AGG | - | chr1.4:56557843-56557862 | None:intergenic | 45.0% | |
TACAGTAGGATACAGCCTCA+TGG | - | chr1.4:56557781-56557800 | None:intergenic | 45.0% | |
! | GATAAGCTAGTCTACCTCCA+TGG | + | chr1.4:56557741-56557760 | MS.gene036057:CDS | 45.0% |
! | GCACTCTCTCTTTTGTTAGC+AGG | + | chr1.4:56557573-56557592 | MS.gene036057:intron | 45.0% |
! | GGAGGAACGTTTCGATTTGA+AGG | + | chr1.4:56556843-56556862 | MS.gene036057:CDS | 45.0% |
! | TGTATCTGAAGCAGGTACTG+AGG | + | chr1.4:56557142-56557161 | MS.gene036057:CDS | 45.0% |
!! | AATTTTGGCAACTACGGGAG+GGG | + | chr1.4:56556936-56556955 | MS.gene036057:CDS | 45.0% |
!! | AGAATTTTGGCAACTACGGG+AGG | + | chr1.4:56556934-56556953 | MS.gene036057:CDS | 45.0% |
!! | CTTGCTTTTCTCTTCGCGTT+TGG | - | chr1.4:56557444-56557463 | None:intergenic | 45.0% |
!! | GAAGGAAGGTTCTGGAAATG+AGG | + | chr1.4:56557520-56557539 | MS.gene036057:intron | 45.0% |
!! | GAATTTTGGCAACTACGGGA+GGG | + | chr1.4:56556935-56556954 | MS.gene036057:CDS | 45.0% |
!! | GGAGGTAGACTAGCTTATCA+AGG | - | chr1.4:56557740-56557759 | None:intergenic | 45.0% |
!! | TTTCACATACAGGTGGTGGA+AGG | + | chr1.4:56558089-56558108 | MS.gene036057:CDS | 45.0% |
AAGGACAACAGAAGCCCTAG+GGG | - | chr1.4:56558126-56558145 | None:intergenic | 50.0% | |
ATGCCGAATTGGCCGATAGT+TGG | + | chr1.4:56556750-56556769 | MS.gene036057:CDS | 50.0% | |
CTCTCTGATACCCATCTCTC+AGG | - | chr1.4:56557945-56557964 | None:intergenic | 50.0% | |
GAAGGACAACAGAAGCCCTA+GGG | - | chr1.4:56558127-56558146 | None:intergenic | 50.0% | |
GAGAGATGGGTATCAGAGAG+AGG | + | chr1.4:56557945-56557964 | MS.gene036057:CDS | 50.0% | |
GTGCAGCAGCAGTGAAGAAA+TGG | + | chr1.4:56557463-56557482 | MS.gene036057:CDS | 50.0% | |
! | CGTTTCGATTTGAAGGACCC+TGG | + | chr1.4:56556850-56556869 | MS.gene036057:CDS | 50.0% |
! | GCACTGATGAAGGAAGGTTC+TGG | + | chr1.4:56557512-56557531 | MS.gene036057:intron | 50.0% |
! | TGGTTGCAGCTGCCTTGTTA+TGG | + | chr1.4:56558063-56558082 | MS.gene036057:CDS | 50.0% |
!! | ATCTGAAGCAGGTACTGAGG+TGG | + | chr1.4:56557145-56557164 | MS.gene036057:CDS | 50.0% |
!! | ATTTTGGCAACTACGGGAGG+GGG | + | chr1.4:56556937-56556956 | MS.gene036057:CDS | 50.0% |
AAGGTCACCCTGTAACCCCT+AGG | + | chr1.4:56558108-56558127 | MS.gene036057:CDS | 55.0% | |
ACAGAAGCCCTAGGGGTTAC+AGG | - | chr1.4:56558119-56558138 | None:intergenic | 55.0% | |
AGGTCACCCTGTAACCCCTA+GGG | + | chr1.4:56558109-56558128 | MS.gene036057:CDS | 55.0% | |
CAGAAGCCCTAGGGGTTACA+GGG | - | chr1.4:56558118-56558137 | None:intergenic | 55.0% | |
CGAAGGACAACAGAAGCCCT+AGG | - | chr1.4:56558128-56558147 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 56556663 | 56558193 | 56556663 | ID=MS.gene036057 |
chr1.4 | mRNA | 56556663 | 56558193 | 56556663 | ID=MS.gene036057.t1;Parent=MS.gene036057 |
chr1.4 | exon | 56556663 | 56557527 | 56556663 | ID=MS.gene036057.t1.exon1;Parent=MS.gene036057.t1 |
chr1.4 | CDS | 56556663 | 56557527 | 56556663 | ID=cds.MS.gene036057.t1;Parent=MS.gene036057.t1 |
chr1.4 | exon | 56557595 | 56558193 | 56557595 | ID=MS.gene036057.t1.exon2;Parent=MS.gene036057.t1 |
chr1.4 | CDS | 56557595 | 56558193 | 56557595 | ID=cds.MS.gene036057.t1;Parent=MS.gene036057.t1 |
Gene Sequence |
Protein sequence |