AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036057


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036057.t1 MTR_1g069715 89.926 407 19 1 83 467 1 407 0.0 764
MS.gene036057.t1 MTR_1g035670 72.941 510 109 5 1 487 1 504 0.0 756
MS.gene036057.t1 MTR_1g036130 71.176 510 122 4 1 487 1 508 0.0 743
MS.gene036057.t1 MTR_1g036010 68.297 511 136 5 1 487 1 509 0.0 716
MS.gene036057.t1 MTR_1g035760 71.516 488 131 4 1 487 1 481 0.0 714
MS.gene036057.t1 MTR_1g035830 67.906 511 138 5 1 487 1 509 0.0 698
MS.gene036057.t1 MTR_1g035940 67.710 511 139 5 1 487 1 509 0.0 698
MS.gene036057.t1 MTR_1g035750 60.904 509 175 4 1 487 1 507 0.0 648
MS.gene036057.t1 MTR_1g035860 70.522 441 101 5 10 427 16 450 0.0 626
MS.gene036057.t1 MTR_1g035790 59.802 505 184 5 1 487 1 504 0.0 620
MS.gene036057.t1 MTR_1g036200 59.443 503 170 5 10 487 8 501 0.0 606
MS.gene036057.t1 MTR_1g035580 59.295 511 171 6 1 487 1 498 0.0 606
MS.gene036057.t1 MTR_1g035800 58.285 513 185 5 1 485 1 512 0.0 599
MS.gene036057.t1 MTR_1g050362 58.153 509 186 6 3 486 1 507 0.0 599
MS.gene036057.t1 MTR_1g036270 56.505 515 194 7 1 487 1 513 0.0 589
MS.gene036057.t1 MTR_7g033580 50.699 501 228 5 1 487 1 496 0.0 520
MS.gene036057.t1 MTR_7g033570 50.202 494 227 5 8 487 8 496 1.00e-178 511
MS.gene036057.t1 MTR_8g088470 50.816 490 221 6 11 485 7 491 5.40e-177 506
MS.gene036057.t1 MTR_6g004630 46.918 503 230 8 10 487 15 505 2.22e-160 464
MS.gene036057.t1 MTR_6g004600 44.401 509 247 6 10 487 14 517 6.64e-157 456
MS.gene036057.t1 MTR_6g004670 44.970 507 244 6 4 485 9 505 7.02e-155 450
MS.gene036057.t1 MTR_6g004590 44.272 515 240 8 11 487 12 517 3.53e-153 446
MS.gene036057.t1 MTR_6g004610 46.610 472 217 7 38 484 1 462 2.42e-149 435
MS.gene036057.t1 MTR_1g037560 37.325 501 261 12 23 486 60 544 1.63e-112 343
MS.gene036057.t1 MTR_4g075110 35.421 511 295 6 4 485 45 549 3.31e-111 340
MS.gene036057.t1 MTR_1g037550 36.255 502 269 11 23 486 60 548 2.30e-106 328
MS.gene036057.t1 MTR_6g084040 83.696 184 12 1 1 184 1 166 3.37e-103 306
MS.gene036057.t1 MTR_4g012320 59.606 203 82 0 285 487 23 225 5.46e-89 271
MS.gene036057.t1 MTR_8g098435 34.025 482 280 10 33 485 33 505 3.61e-85 271
MS.gene036057.t1 MTR_8g030590 33.060 487 283 11 33 485 33 510 1.31e-84 271
MS.gene036057.t1 MTR_5g070010 32.158 482 291 8 33 485 34 508 7.74e-84 268
MS.gene036057.t1 MTR_3g463060 32.704 477 282 9 34 485 40 502 1.44e-77 251
MS.gene036057.t1 MTR_1g070365 33.951 486 282 11 24 485 34 504 2.12e-76 248
MS.gene036057.t1 MTR_7g096340 31.818 484 294 11 25 486 34 503 3.82e-74 242
MS.gene036057.t1 MTR_7g096320 31.884 483 293 12 25 485 35 503 5.64e-72 237
MS.gene036057.t1 MTR_1g070345 32.158 482 296 10 25 486 35 505 5.19e-71 234
MS.gene036057.t1 MTR_7g088330 31.014 503 304 13 13 485 19 508 1.88e-69 230
MS.gene036057.t1 MTR_8g035780 32.582 488 282 15 31 486 39 511 2.27e-66 222
MS.gene036057.t1 MTR_3g080580 29.158 487 303 9 31 485 41 517 3.24e-66 222
MS.gene036057.t1 MTR_7g029275 30.120 498 314 12 13 485 20 508 1.05e-64 218
MS.gene036057.t1 MTR_8g035860 30.255 509 304 14 10 485 19 509 2.89e-64 216
MS.gene036057.t1 MTR_4g054920 33.180 434 253 11 79 485 93 516 3.24e-64 217
MS.gene036057.t1 MTR_8g035760 29.278 485 288 12 34 485 49 511 7.91e-64 216
MS.gene036057.t1 MTR_8g035680 28.986 483 293 13 34 485 49 512 1.55e-63 215
MS.gene036057.t1 MTR_8g035810 30.255 509 305 16 10 485 19 510 1.09e-62 213
MS.gene036057.t1 MTR_8g035820 30.228 483 291 11 34 485 42 509 3.07e-62 211
MS.gene036057.t1 MTR_4g119660 28.166 529 302 14 13 486 11 516 9.04e-62 210
MS.gene036057.t1 MTR_5g019140 28.060 531 300 16 13 486 26 531 9.39e-61 208
MS.gene036057.t1 MTR_1g060550 33.503 394 245 7 77 458 93 481 1.86e-60 207
MS.gene036057.t1 MTR_1g102220 28.452 478 302 11 34 485 43 506 1.49e-59 204
MS.gene036057.t1 MTR_2g086040 29.867 452 287 12 48 485 63 498 4.56e-57 197
MS.gene036057.t1 MTR_7g406990 31.148 366 214 9 23 360 41 396 1.05e-51 181
MS.gene036057.t1 MTR_8g035810 29.953 424 253 12 34 427 42 451 2.91e-50 178
MS.gene036057.t1 MTR_1g040110 72.477 109 30 0 126 234 57 165 6.43e-49 166
MS.gene036057.t1 MTR_8g035680 29.178 353 217 8 158 485 21 365 3.89e-46 164
MS.gene036057.t1 MTR_1g102210 28.358 335 216 7 161 485 41 361 1.68e-35 135
MS.gene036057.t1 MTR_1g070370 36.694 248 134 6 169 403 5 242 8.75e-34 128
MS.gene036057.t1 MTR_1g050590 56.198 121 26 3 250 348 3 118 7.09e-33 121
MS.gene036057.t1 MTR_8g035810 27.559 381 228 14 10 358 19 383 3.03e-30 122
MS.gene036057.t1 MTR_7g079440 24.074 486 315 17 29 485 188 648 4.64e-30 124
MS.gene036057.t1 MTR_1g035660 43.651 126 54 3 161 286 21 129 2.16e-23 96.3
MS.gene036057.t1 MTR_1g036140 64.706 68 23 1 1 67 1 68 7.80e-23 95.5
MS.gene036057.t1 MTR_1g036140 54.545 99 18 3 252 328 69 162 2.27e-21 91.3
MS.gene036057.t1 MTR_7g079440 24.324 407 256 15 29 408 188 569 1.22e-22 101
MS.gene036057.t1 MTR_2g010250 30.837 227 147 5 263 485 285 505 5.18e-22 99.4
MS.gene036057.t1 MTR_2g010290 29.956 227 149 5 263 485 312 532 1.09e-21 98.6
MS.gene036057.t1 MTR_8g098565 27.559 254 172 5 238 485 259 506 2.12e-21 97.4
MS.gene036057.t1 MTR_5g009110 23.251 486 297 18 60 486 103 571 4.61e-21 96.7
MS.gene036057.t1 MTR_2g010320 25.070 355 232 10 157 485 157 503 8.98e-21 95.5
MS.gene036057.t1 MTR_3g093530 24.634 410 271 12 95 484 132 523 1.59e-20 94.7
MS.gene036057.t1 MTR_8g035790 44.444 99 53 2 389 486 1 98 6.92e-20 85.1
MS.gene036057.t1 MTR_2g010380 29.075 227 151 5 263 485 289 509 9.89e-20 92.4
MS.gene036057.t1 MTR_2g010330 24.862 362 230 10 154 485 158 507 1.78e-19 91.7
MS.gene036057.t1 MTR_0181s0030 23.465 456 297 15 31 458 39 470 2.10e-19 91.3
MS.gene036057.t1 MTR_8g046580 43.299 97 54 1 364 460 197 292 2.98e-19 88.6
MS.gene036057.t1 MTR_2g010280 29.333 225 149 5 265 485 285 503 3.01e-19 90.9
MS.gene036057.t1 MTR_0147s0030 23.325 403 283 12 95 484 141 530 3.54e-18 87.8
MS.gene036057.t1 MTR_6g072490 28.452 239 156 8 245 482 286 510 3.71e-18 87.4
MS.gene036057.t1 MTR_7g006900 27.404 208 133 6 274 480 277 467 1.01e-17 85.9
MS.gene036057.t1 MTR_8g008530 21.717 396 272 11 109 484 141 518 2.83e-17 84.7
MS.gene036057.t1 MTR_1g101050 21.957 460 307 14 47 482 77 508 4.21e-17 84.3
MS.gene036057.t1 MTR_2g010300 25.627 359 213 13 157 486 157 490 5.91e-17 83.6
MS.gene036057.t1 MTR_6g017325 27.885 208 132 6 274 480 312 502 5.97e-17 84.0
MS.gene036057.t1 MTR_4g088420 28.804 184 125 3 282 464 28 206 5.98e-17 80.5
MS.gene036057.t1 MTR_2g072270 23.581 458 267 20 63 480 104 518 1.02e-16 83.2
MS.gene036057.t1 MTR_1g101040 27.907 215 141 6 269 482 311 512 1.22e-16 82.8
MS.gene036057.t1 MTR_1g015860 31.276 243 139 11 256 486 303 529 1.98e-16 82.4
MS.gene036057.t1 MTR_1g085680 26.027 219 140 6 267 480 310 511 3.81e-16 81.3
MS.gene036057.t1 MTR_1g022040 22.611 429 289 14 70 480 95 498 6.35e-16 80.5
MS.gene036057.t1 MTR_7g087520 23.011 465 289 20 31 454 42 478 8.72e-16 80.1
MS.gene036057.t1 MTR_5g009110 22.759 435 266 15 110 486 1 423 1.76e-15 79.0
MS.gene036057.t1 MTR_4g113650 22.129 479 315 14 27 480 69 514 2.02e-15 79.0
MS.gene036057.t1 MTR_8g042020 25.110 227 136 7 269 484 319 522 4.11e-15 78.2
MS.gene036057.t1 MTR_2g061750 29.348 184 113 4 77 247 15 194 7.52e-15 73.6
MS.gene036057.t1 MTR_7g098550 24.429 438 279 17 60 480 90 492 8.91e-15 77.0
MS.gene036057.t1 MTR_2g061740 29.348 184 113 4 77 247 15 194 1.00e-14 73.6
MS.gene036057.t1 MTR_2g065360 24.518 363 227 12 122 458 99 440 1.18e-14 76.6
MS.gene036057.t1 MTR_0171s0020 25.391 256 161 7 227 458 227 476 2.34e-14 75.9
MS.gene036057.t1 MTR_7g055793 22.321 448 303 12 58 484 100 523 2.43e-14 75.9
MS.gene036057.t1 MTR_7g055793 22.321 448 303 12 58 484 45 468 3.04e-14 75.1
MS.gene036057.t1 MTR_0025s0110 21.645 462 308 17 47 482 90 523 3.15e-14 75.5
MS.gene036057.t1 MTR_5g070920 26.984 189 130 4 292 480 310 490 3.50e-14 75.1
MS.gene036057.t1 MTR_5g009110 24.128 344 216 12 60 373 103 431 3.66e-14 75.1
MS.gene036057.t1 MTR_1g069200 24.766 214 149 5 269 482 308 509 5.83e-14 74.3
MS.gene036057.t1 MTR_6g008640 23.138 376 235 9 119 464 146 497 5.84e-14 74.7
MS.gene036057.t1 MTR_8g042060 23.077 221 148 5 269 484 284 487 6.73e-14 74.3
MS.gene036057.t1 MTR_8g042060 23.077 221 148 5 269 484 320 523 8.45e-14 73.9
MS.gene036057.t1 MTR_6g008500 26.437 174 112 4 289 456 338 501 8.59e-14 73.9
MS.gene036057.t1 MTR_5g070690 28.333 180 118 4 289 466 306 476 1.13e-13 73.6
MS.gene036057.t1 MTR_5g070800 28.333 180 118 4 289 466 306 476 1.13e-13 73.6
MS.gene036057.t1 MTR_5g070840 28.966 145 94 2 315 455 1 140 1.34e-13 69.3
MS.gene036057.t1 MTR_8g104030 28.061 196 123 6 263 454 63 244 1.78e-13 71.2
MS.gene036057.t1 MTR_5g016440 27.442 215 145 6 275 487 284 489 1.85e-13 72.8
MS.gene036057.t1 MTR_7g098550 26.351 148 103 2 333 480 359 500 2.10e-13 72.8
MS.gene036057.t1 MTR_8g104100 27.536 207 124 8 258 454 39 229 2.27e-13 70.5
MS.gene036057.t1 MTR_3g024520 23.647 351 220 14 142 461 144 477 2.51e-13 72.4
MS.gene036057.t1 MTR_6g084060 78.378 37 8 0 56 92 17 53 2.56e-13 64.7
MS.gene036057.t1 MTR_7g079440 23.101 316 200 11 29 318 188 486 3.28e-13 72.0
MS.gene036057.t1 MTR_6g042540 24.468 188 137 3 284 470 315 498 5.81e-13 71.2
MS.gene036057.t1 MTR_4g018800 21.831 426 261 15 71 456 98 491 6.84e-13 71.2
MS.gene036057.t1 MTR_4g104610 20.445 494 324 18 3 455 1 466 6.93e-13 71.2
MS.gene036057.t1 MTR_2g072340 20.776 438 304 13 70 484 98 515 8.01e-13 70.9
MS.gene036057.t1 MTR_0171s0030 25.000 376 221 14 138 478 61 410 8.13e-13 70.5
MS.gene036057.t1 MTR_6g008650 22.523 333 204 10 168 464 185 499 1.18e-12 70.5
MS.gene036057.t1 MTR_5g018500 26.829 164 111 5 296 456 3 160 1.33e-12 67.0
MS.gene036057.t1 MTR_7g075580 26.423 246 159 8 243 482 270 499 1.54e-12 70.1
MS.gene036057.t1 MTR_6g084900 28.070 171 107 4 291 454 70 231 1.62e-12 68.2
MS.gene036057.t1 MTR_6g035115 21.579 380 250 12 103 454 102 461 2.65e-12 69.3
MS.gene036057.t1 MTR_6g008430 26.923 182 127 4 284 464 316 492 3.76e-12 68.9
MS.gene036057.t1 MTR_4g071710 26.570 207 138 5 263 461 284 484 3.85e-12 68.9
MS.gene036057.t1 MTR_3g025230 24.308 325 199 13 168 461 169 477 3.90e-12 68.9
MS.gene036057.t1 MTR_1g107300 24.022 179 130 4 284 462 2 174 3.92e-12 66.2
MS.gene036057.t1 MTR_7g075610 26.966 178 114 6 289 461 308 474 3.94e-12 68.6
MS.gene036057.t1 MTR_4g089055 23.650 389 242 16 104 461 122 486 4.38e-12 68.6
MS.gene036057.t1 MTR_2g061200 22.525 404 274 12 109 484 136 528 4.82e-12 68.6
MS.gene036057.t1 MTR_4g062510 25.126 199 132 6 273 460 294 486 6.01e-12 68.2
MS.gene036057.t1 MTR_5g070710 23.415 205 145 5 280 480 292 488 8.49e-12 67.8
MS.gene036057.t1 MTR_6g022450 25.490 204 138 5 282 484 308 498 9.17e-12 67.8
MS.gene036057.t1 MTR_5g070830 23.926 163 119 2 292 454 421 578 9.45e-12 67.8
MS.gene036057.t1 MTR_6g084770 26.190 168 111 3 292 455 312 470 1.07e-11 67.4
MS.gene036057.t1 MTR_4g094775 20.682 469 333 10 6 454 8 457 1.82e-11 66.6
MS.gene036057.t1 MTR_5g095230 23.737 198 140 4 289 484 325 513 1.87e-11 66.6
MS.gene036057.t1 MTR_5g070700 24.352 193 130 5 292 480 311 491 2.15e-11 66.2
MS.gene036057.t1 MTR_8g469300 23.944 284 182 9 196 455 199 472 2.48e-11 66.2
MS.gene036057.t1 MTR_6g008630 25.134 187 124 4 284 464 233 409 2.53e-11 65.9
MS.gene036057.t1 MTR_2g072400 20.045 444 300 14 70 484 98 515 2.58e-11 66.2
MS.gene036057.t1 MTR_3g014880 23.396 265 159 8 232 464 248 500 2.59e-11 66.2
MS.gene036057.t1 MTR_1g107295 23.834 193 133 5 277 461 299 485 2.60e-11 66.2
MS.gene036057.t1 MTR_7g012860 25.000 316 198 13 169 461 172 471 2.90e-11 65.9
MS.gene036057.t1 MTR_0287s0060 25.000 316 198 13 169 461 172 471 2.90e-11 65.9
MS.gene036057.t1 MTR_6g042610 24.468 188 137 3 284 470 316 499 2.97e-11 65.9
MS.gene036057.t1 MTR_1g492820 21.008 476 322 18 12 455 29 482 4.50e-11 65.5
MS.gene036057.t1 MTR_6g008600 25.287 174 114 4 289 456 330 493 4.51e-11 65.5
MS.gene036057.t1 MTR_5g026520 23.828 256 182 6 238 485 258 508 6.12e-11 65.1
MS.gene036057.t1 MTR_3g025260 24.308 325 199 13 168 461 169 477 6.24e-11 65.1
MS.gene036057.t1 MTR_0638s0020 22.910 323 213 9 157 458 90 397 9.52e-11 64.3
MS.gene036057.t1 MTR_3g436540 22.568 257 178 6 221 461 229 480 9.74e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036057.t1 AT4G39500 40.351 513 267 7 4 486 14 517 4.88e-133 395
MS.gene036057.t1 AT2G23180 38.491 517 281 6 1 485 1 512 5.95e-133 395
MS.gene036057.t1 AT4G32170 40.430 512 271 7 1 486 1 504 2.83e-130 387
MS.gene036057.t1 AT1G57750 37.769 511 279 7 1 486 1 497 9.18e-128 380
MS.gene036057.t1 AT4G39500 40.842 475 247 5 38 486 1 467 6.26e-127 377
MS.gene036057.t1 AT2G21910 40.116 516 272 9 1 487 1 508 1.18e-126 378
MS.gene036057.t1 AT4G39490 38.372 516 273 9 11 487 9 518 1.23e-126 379
MS.gene036057.t1 AT1G47620 38.050 523 280 7 1 486 1 516 6.93e-124 372
MS.gene036057.t1 AT4G39510 39.845 517 269 9 1 486 1 506 4.80e-122 366
MS.gene036057.t1 AT4G39480 38.314 522 280 8 1 487 1 515 1.62e-120 363
MS.gene036057.t1 AT5G52320 38.494 478 257 6 32 484 36 501 7.76e-116 350
MS.gene036057.t1 AT1G65340 37.967 482 261 7 29 484 33 502 1.66e-113 344
MS.gene036057.t1 AT5G52320 38.055 473 256 6 32 479 36 496 1.97e-113 344
MS.gene036057.t1 AT5G02900 38.372 516 252 12 1 486 1 480 4.33e-109 332
MS.gene036057.t1 AT5G08250 35.521 518 288 8 4 487 37 542 1.04e-105 326
MS.gene036057.t1 AT5G23190 34.175 515 300 7 4 487 36 542 4.66e-105 324
MS.gene036057.t1 AT5G08250 35.976 492 269 8 30 487 1 480 7.10e-102 314
MS.gene036057.t1 AT1G24540 34.879 496 273 10 25 485 40 520 1.37e-94 296
MS.gene036057.t1 AT1G57750 34.932 438 246 7 1 413 1 424 5.18e-94 292
MS.gene036057.t1 AT3G26125 33.605 491 287 7 32 487 48 534 5.79e-94 295
MS.gene036057.t1 AT1G13140 32.851 484 290 7 33 487 49 526 1.71e-91 288
MS.gene036057.t1 AT1G13140 33.262 466 286 6 33 487 49 500 4.30e-91 286
MS.gene036057.t1 AT1G13150 33.265 487 284 9 33 487 42 519 1.38e-90 286
MS.gene036057.t1 AT2G45970 33.265 490 278 11 33 485 33 510 7.75e-88 279
MS.gene036057.t1 AT1G63710 33.608 485 280 10 33 485 33 507 2.01e-86 275
MS.gene036057.t1 AT4G00360 33.060 487 284 10 33 485 33 511 2.73e-85 273
MS.gene036057.t1 AT1G01600 32.314 523 300 13 1 485 7 513 1.90e-84 271
MS.gene036057.t1 AT5G58860 31.526 498 304 9 15 485 21 508 3.30e-81 261
MS.gene036057.t1 AT3G56630 33.122 474 289 12 32 485 33 498 2.23e-73 240
MS.gene036057.t1 AT1G34540 32.272 471 296 8 32 485 33 497 2.81e-72 237
MS.gene036057.t1 AT2G45510 31.569 510 298 15 10 485 16 508 3.41e-67 224
MS.gene036057.t1 AT2G27690 31.742 419 262 8 77 482 76 483 7.01e-66 221
MS.gene036057.t1 AT2G44890 32.645 484 279 14 34 486 42 509 1.92e-65 220
MS.gene036057.t1 AT3G48520 28.600 507 317 8 10 485 7 499 3.52e-64 216
MS.gene036057.t1 AT3G01900 30.085 472 297 9 32 485 34 490 9.18e-63 212
MS.gene036057.t1 AT1G69500 28.492 537 318 11 3 486 1 524 2.08e-62 212
MS.gene036057.t1 AT2G44890 31.875 480 270 14 34 486 42 491 1.39e-61 209
MS.gene036057.t1 AT5G63450 31.481 432 260 9 77 485 84 502 2.25e-60 206
MS.gene036057.t1 AT5G63450 31.481 432 260 9 77 485 142 560 7.08e-60 206
MS.gene036057.t1 AT1G31800 24.297 498 322 19 18 486 99 570 2.91e-29 121
MS.gene036057.t1 AT3G53130 22.601 469 289 18 57 485 105 539 1.40e-25 110
MS.gene036057.t1 AT1G66030 34.118 170 94 4 1 160 1 162 5.77e-23 95.9
MS.gene036057.t1 AT5G24900 23.256 430 282 11 82 483 116 525 4.47e-22 99.8
MS.gene036057.t1 AT5G24900 23.239 426 279 11 85 482 2 407 6.91e-22 98.2
MS.gene036057.t1 AT2G26710 23.899 477 304 15 35 480 62 510 3.61e-21 97.1
MS.gene036057.t1 AT5G52400 22.449 441 311 11 52 480 93 514 1.56e-19 92.0
MS.gene036057.t1 AT4G13770 21.739 368 254 8 115 461 116 470 8.59e-18 86.3
MS.gene036057.t1 AT4G13310 26.421 299 170 9 162 433 165 440 1.64e-17 85.5
MS.gene036057.t1 AT1G64940 26.222 225 155 5 263 485 293 508 7.32e-17 83.6
MS.gene036057.t1 AT1G64950 25.333 225 157 4 263 485 292 507 1.74e-16 82.4
MS.gene036057.t1 AT1G01280 21.739 414 277 15 73 455 73 470 4.71e-16 81.3
MS.gene036057.t1 AT2G46950 25.229 218 152 4 263 480 359 565 4.76e-16 81.3
MS.gene036057.t1 AT5G57260 25.137 366 232 14 122 461 122 471 4.86e-16 80.9
MS.gene036057.t1 AT3G14660 22.887 485 290 19 21 458 38 485 5.51e-16 80.9
MS.gene036057.t1 AT4G27710 27.586 232 156 6 250 480 292 512 6.69e-16 80.5
MS.gene036057.t1 AT4G31500 21.844 499 322 18 1 461 1 469 1.33e-15 79.7
MS.gene036057.t1 AT2G30770 29.480 173 118 3 289 461 299 467 2.03e-15 79.0
MS.gene036057.t1 AT5G24910 22.145 429 293 13 82 485 120 532 3.31e-15 78.6
MS.gene036057.t1 AT4G13290 24.267 375 239 17 75 433 88 433 8.47e-15 77.0
MS.gene036057.t1 AT4G37320 23.967 363 222 13 142 474 146 484 1.13e-14 76.6
MS.gene036057.t1 AT3G48300 21.981 414 256 14 87 480 111 477 1.49e-14 76.3
MS.gene036057.t1 AT3G03470 26.957 230 153 6 264 485 287 509 1.50e-14 76.3
MS.gene036057.t1 AT3G48300 21.981 414 256 14 87 480 113 479 1.50e-14 76.3
MS.gene036057.t1 AT3G25180 28.415 183 125 5 282 464 307 483 1.58e-14 76.3
MS.gene036057.t1 AT2G46960 27.064 218 147 5 264 480 306 512 1.91e-14 76.3
MS.gene036057.t1 AT2G46960 27.461 193 133 4 289 480 210 396 2.08e-14 75.5
MS.gene036057.t1 AT3G26830 24.138 348 221 12 131 454 133 461 3.81e-14 75.1
MS.gene036057.t1 AT2G12190 23.643 258 178 6 238 485 261 509 4.10e-14 75.1
MS.gene036057.t1 AT3G26280 23.967 363 227 10 122 454 141 484 4.61e-14 74.7
MS.gene036057.t1 AT3G26280 23.967 363 227 10 122 454 124 467 5.20e-14 74.7
MS.gene036057.t1 AT4G37340 22.687 335 217 10 140 454 143 455 5.67e-14 74.7
MS.gene036057.t1 AT3G61040 30.108 186 115 6 276 454 283 460 5.95e-14 74.3
MS.gene036057.t1 AT3G26330 22.727 374 227 12 122 461 123 468 1.02e-13 73.9
MS.gene036057.t1 AT4G37370 24.501 351 226 13 140 468 143 476 1.09e-13 73.6
MS.gene036057.t1 AT5G38450 28.365 208 133 6 274 480 319 511 1.76e-13 73.2
MS.gene036057.t1 AT1G67110 27.885 208 134 6 274 480 313 505 1.91e-13 72.8
MS.gene036057.t1 AT3G48270 25.294 170 114 3 289 454 292 452 2.03e-13 72.8
MS.gene036057.t1 AT3G20140 24.793 363 213 14 150 479 163 498 2.48e-13 72.4
MS.gene036057.t1 AT1G13100 22.324 327 217 10 153 454 147 461 3.06e-13 72.4
MS.gene036057.t1 AT3G48310 21.351 459 284 20 31 454 37 453 4.24e-13 71.6
MS.gene036057.t1 AT5G35715 24.924 329 204 14 153 454 88 400 1.81e-12 69.7
MS.gene036057.t1 AT5G24950 25.339 221 148 5 243 455 250 461 2.00e-12 69.7
MS.gene036057.t1 AT3G26270 24.485 388 242 16 98 454 99 466 2.04e-12 69.7
MS.gene036057.t1 AT1G33720 22.930 471 288 17 31 461 43 478 2.51e-12 69.3
MS.gene036057.t1 AT3G26210 21.644 365 237 13 153 485 153 500 2.76e-12 69.3
MS.gene036057.t1 AT2G22330 27.586 174 120 5 282 454 332 500 3.50e-12 68.9
MS.gene036057.t1 AT1G64900 25.591 254 171 7 238 486 265 505 3.87e-12 68.9
MS.gene036057.t1 AT1G33730 27.933 179 111 5 289 461 176 342 3.89e-12 68.2
MS.gene036057.t1 AT1G33730 27.933 179 111 5 289 461 176 342 3.89e-12 68.2
MS.gene036057.t1 AT2G22330 27.586 174 120 5 282 454 355 523 3.93e-12 68.9
MS.gene036057.t1 AT1G01190 28.125 192 126 7 288 474 337 521 4.58e-12 68.6
MS.gene036057.t1 AT1G01190 28.125 192 126 7 288 474 332 516 5.51e-12 68.6
MS.gene036057.t1 AT3G14660 26.471 204 126 6 269 466 162 347 8.34e-12 67.0
MS.gene036057.t1 AT4G39950 26.437 174 122 4 282 454 330 498 1.40e-11 67.0
MS.gene036057.t1 AT4G31940 26.522 230 158 6 238 464 273 494 1.43e-11 67.0
MS.gene036057.t1 AT1G13080 24.242 264 169 9 219 461 101 354 1.44e-11 66.6
MS.gene036057.t1 AT2G30750 27.315 216 147 6 243 454 251 460 1.45e-11 67.0
MS.gene036057.t1 AT4G39950 26.437 174 122 4 282 454 370 538 1.52e-11 67.0
MS.gene036057.t1 AT3G26160 27.439 164 102 6 278 433 290 444 1.66e-11 67.0
MS.gene036057.t1 AT2G45570 24.093 386 234 14 115 461 114 479 1.91e-11 66.6
MS.gene036057.t1 AT5G05260 22.946 353 234 12 115 454 129 456 2.01e-11 66.6
MS.gene036057.t1 AT3G14630 21.795 390 234 13 113 466 135 489 2.05e-11 66.6
MS.gene036057.t1 AT5G25120 20.613 359 257 9 122 464 121 467 2.66e-11 66.2
MS.gene036057.t1 AT5G10610 25.389 193 136 4 275 467 286 470 2.70e-11 66.2
MS.gene036057.t1 AT3G14630 21.795 390 234 13 113 466 190 544 3.30e-11 65.9
MS.gene036057.t1 AT1G13080 24.242 264 169 9 219 461 219 472 3.35e-11 65.9
MS.gene036057.t1 AT3G28740 25.620 242 151 8 234 460 242 469 4.96e-11 65.5
MS.gene036057.t1 AT3G26300 23.014 365 243 11 122 464 123 471 5.05e-11 65.5
MS.gene036057.t1 AT3G26310 24.046 262 166 8 221 461 218 467 5.37e-11 65.1
MS.gene036057.t1 AT4G37430 21.169 496 322 17 16 475 18 480 6.23e-11 65.1
MS.gene036057.t1 AT1G50560 26.106 226 142 8 268 479 291 505 6.34e-11 65.1
MS.gene036057.t1 AT1G33720 25.434 173 123 4 289 461 180 346 6.46e-11 64.3
MS.gene036057.t1 AT1G33720 25.434 173 123 4 289 461 180 346 6.46e-11 64.3
MS.gene036057.t1 AT1G33720 25.434 173 123 4 289 461 180 346 6.46e-11 64.3
MS.gene036057.t1 AT4G15380 24.031 258 179 7 229 480 253 499 6.66e-11 65.1
MS.gene036057.t1 AT4G15350 26.699 206 137 7 289 487 306 504 7.97e-11 64.7
MS.gene036057.t1 AT2G23220 21.856 334 230 8 140 459 159 475 8.41e-11 64.7
MS.gene036057.t1 AT4G37310 22.903 310 206 9 152 439 154 452 8.60e-11 64.7

Find 97 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATCTGCATTATTGTATT+TGG 0.098646 1.4:+56557203 MS.gene036057:CDS
TCTGATCTCTTGAATAATTT+TGG 0.120978 1.4:-56557664 None:intergenic
CTAAGATCACTAATCTTATT+TGG 0.151101 1.4:-56557245 None:intergenic
GAGTAAATTAACTTGGTATT+TGG 0.194985 1.4:-56557861 None:intergenic
ACTTCATTCCTAGTTGTTTA+TGG 0.198813 1.4:+56557324 MS.gene036057:CDS
TATTTGGATTTGATCCTAAT+TGG 0.230599 1.4:+56557219 MS.gene036057:CDS
GCGATGTGGTTAACGTTTAT+TGG 0.238352 1.4:-56556906 None:intergenic
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.4:+56557895 MS.gene036057:CDS
ATCTTATTTGGAAGCCAATT+AGG 0.275411 1.4:-56557233 None:intergenic
CACATCGCAAGCAAGAATTT+TGG 0.283007 1.4:+56556921 MS.gene036057:CDS
TCTTTACTCATACAACTTCT+AGG 0.304477 1.4:-56558017 None:intergenic
TCTTCATTTACATCTACTAT+TGG 0.341938 1.4:+56556706 MS.gene036057:CDS
TCAGATACATCATTAATAAA+TGG 0.345893 1.4:-56557128 None:intergenic
ACAGAAGCCCTAGGGGTTAC+AGG 0.354307 1.4:-56558116 None:intergenic
TCCTCTTCTCTTTCCATACA+TGG 0.366109 1.4:-56557019 None:intergenic
AATTTACTCTTTGTATGCTA+TGG 0.370405 1.4:+56557875 MS.gene036057:CDS
CTCCATGACGTTTCAAAACT+AGG 0.378664 1.4:-56556824 None:intergenic
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.4:+56557896 MS.gene036057:CDS
CTGCAGAAATGGTTTCTTGT+TGG 0.391077 1.4:+56557350 MS.gene036057:CDS
TCAATTCTGATTCCCATGTA+TGG 0.406666 1.4:+56557006 MS.gene036057:CDS
GTGCATCACAACATGAGAAT+TGG 0.410239 1.4:+56557694 MS.gene036057:CDS
AAGTTCATAGCTTTCAATAC+AGG 0.418468 1.4:+56557993 MS.gene036057:CDS
CTCTCCACTAGGTAGTATAT+CGG 0.419404 1.4:-56557829 None:intergenic
TGGTTGCAGCTGCCTTGTTA+TGG 0.421111 1.4:+56558063 MS.gene036057:CDS
GTTTATGGAAGCTGCAGAAA+TGG 0.422474 1.4:+56557339 MS.gene036057:CDS
GTGCAGCAGCAGTGAAGAAA+TGG 0.426826 1.4:+56557463 MS.gene036057:CDS
AAAATCTCTTATTGTGATAG+AGG 0.429045 1.4:+56557283 MS.gene036057:CDS
GGAGGAACGTTTCGATTTGA+AGG 0.431858 1.4:+56556843 MS.gene036057:CDS
GTTATGGAAGTTTCACATAC+AGG 0.433937 1.4:+56558079 MS.gene036057:CDS
CATCATTAATAAATGGTAGT+AGG 0.441729 1.4:-56557121 None:intergenic
GCAGTGAGATTATGCCGAAT+TGG 0.443620 1.4:+56556739 MS.gene036057:CDS
TGTTTCATTCAATTCTCAAA+AGG 0.451412 1.4:+56557045 MS.gene036057:CDS
TTACACTTTCATACAAGAAT+CGG 0.453389 1.4:-56557412 None:intergenic
GTTTCAAAACTAGGGTGAAA+TGG 0.457269 1.4:-56556815 None:intergenic
TCGAATGAAACATGGCTTGA+AGG 0.466524 1.4:+56558145 MS.gene036057:CDS
ACTTGCAAGATATCTTGAAT+AGG 0.468493 1.4:+56557168 MS.gene036057:CDS
CACTTAGTTCAAGTCTCAGT+TGG 0.468578 1.4:+56557604 MS.gene036057:CDS
ATACCAACTATCGGCCAATT+CGG 0.470840 1.4:-56556753 None:intergenic
CTCTCTGATACCCATCTCTC+AGG 0.476597 1.4:-56557942 None:intergenic
ATTAATGATGTATCTGAAGC+AGG 0.478589 1.4:+56557134 MS.gene036057:CDS
AAAGCTTGTGTTTGTGAACC+AGG 0.479518 1.4:-56556868 None:intergenic
ATGCCGAATTGGCCGATAGT+TGG 0.480925 1.4:+56556750 MS.gene036057:CDS
TAGTTTCATTCAAATGAAGA+TGG 0.482291 1.4:+56558043 MS.gene036057:CDS
ATTTACTCTTTGTATGCTAT+GGG 0.482323 1.4:+56557876 MS.gene036057:CDS
TGCATGATTCAATGTATTGA+AGG 0.487169 1.4:+56556666 MS.gene036057:CDS
CCTCTTCTCTTTCCATACAT+GGG 0.487601 1.4:-56557018 None:intergenic
AGTAGATGTAAATGAAGAAG+AGG 0.496608 1.4:-56556701 None:intergenic
TCAAGCCATGTTTCATTCGA+AGG 0.511506 1.4:-56558142 None:intergenic
TAGAGGAAGTGCTATTCTAC+AGG 0.520423 1.4:+56557300 MS.gene036057:CDS
TGAGAATTGGATAACTTCAA+TGG 0.520544 1.4:+56557707 MS.gene036057:CDS
TCCATGACGTTTCAAAACTA+GGG 0.521163 1.4:-56556823 None:intergenic
GGAATTTAAGCCTGAGAGAT+GGG 0.521678 1.4:+56557932 MS.gene036057:CDS
CTTTGTAAAAGCACTGATGA+AGG 0.527955 1.4:+56557502 MS.gene036057:CDS
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.4:+56557638 MS.gene036057:CDS
GAAGTTTCACATACAGGTGG+TGG 0.531835 1.4:+56558085 MS.gene036057:CDS
ATTGCATTGATAAGCTCAAA+CGG 0.540179 1.4:-56557801 None:intergenic
CAGAAGCCCTAGGGGTTACA+GGG 0.544544 1.4:-56558115 None:intergenic
CCCATGTATGGAAAGAGAAG+AGG 0.545701 1.4:+56557018 MS.gene036057:CDS
TGGAATTTAAGCCTGAGAGA+TGG 0.546234 1.4:+56557931 MS.gene036057:CDS
TTTGTATGCTATGGGAAGGA+TGG 0.548102 1.4:+56557884 MS.gene036057:CDS
AAGGTCACCCTGTAACCCCT+AGG 0.554777 1.4:+56558108 MS.gene036057:CDS
AAAGCTATGAACTTGTAAGA+TGG 0.556387 1.4:-56557984 None:intergenic
CGAAGGACAACAGAAGCCCT+AGG 0.558935 1.4:-56558125 None:intergenic
CGTTTCGATTTGAAGGACCC+TGG 0.559229 1.4:+56556850 MS.gene036057:CDS
GTAAAAGCACTGATGAAGGA+AGG 0.563972 1.4:+56557506 MS.gene036057:CDS
GGAGGTAGACTAGCTTATCA+AGG 0.564942 1.4:-56557737 None:intergenic
TGCAGCTTCCATAAACAACT+AGG 0.568802 1.4:-56557332 None:intergenic
ATACAAAGAGTAAATTAACT+TGG 0.571875 1.4:-56557868 None:intergenic
ACTCTTTGTATGCTATGGGA+AGG 0.574932 1.4:+56557880 MS.gene036057:CDS
GTTGTCCTTCGAATGAAACA+TGG 0.578856 1.4:+56558137 MS.gene036057:CDS
ATAAGCTCAAACGGTACAGT+AGG 0.578870 1.4:-56557792 None:intergenic
GAAGGACAACAGAAGCCCTA+GGG 0.583414 1.4:-56558124 None:intergenic
GACAGTAGCATACCAACTAT+CGG 0.590717 1.4:-56556762 None:intergenic
GATAAGCTAGTCTACCTCCA+TGG 0.593821 1.4:+56557741 MS.gene036057:CDS
TACAGTAGGATACAGCCTCA+TGG 0.605392 1.4:-56557778 None:intergenic
TGGATTCACATATAGCTCCA+TGG 0.609113 1.4:-56557758 None:intergenic
GAAACATGGCTTGAAGGTCA+AGG 0.612274 1.4:+56558151 MS.gene036057:CDS
GATAGTTGGTATGCTACTGT+CGG 0.614295 1.4:+56556764 MS.gene036057:CDS
GAGAGATGGGTATCAGAGAG+AGG 0.617792 1.4:+56557945 MS.gene036057:CDS
AGGTCACCCTGTAACCCCTA+GGG 0.618514 1.4:+56558109 MS.gene036057:CDS
ATCTACTATTGGCGACACAA+TGG 0.620970 1.4:+56556717 MS.gene036057:CDS
TGGTCAAGAAAAGAAGTACA+AGG 0.628979 1.4:+56557370 MS.gene036057:CDS
AATATGGGGAGAAGACTGCA+TGG 0.631048 1.4:+56557911 MS.gene036057:CDS
GGAAGGATGGAACAAATATG+GGG 0.639334 1.4:+56557897 MS.gene036057:CDS
TTTCACATACAGGTGGTGGA+AGG 0.639771 1.4:+56558089 MS.gene036057:CDS
CAAAATTCTTGCTTGCGATG+TGG 0.640167 1.4:-56556920 None:intergenic
AAGCTTGTGTTTGTGAACCA+GGG 0.641414 1.4:-56556867 None:intergenic
GGACTAACATTCTCTCCACT+AGG 0.648789 1.4:-56557840 None:intergenic
ATCTGAAGCAGGTACTGAGG+TGG 0.648911 1.4:+56557145 MS.gene036057:CDS
AAATCCGATATACTACCTAG+TGG 0.664104 1.4:+56557825 MS.gene036057:CDS
ATGGAAGTTTCACATACAGG+TGG 0.670752 1.4:+56558082 MS.gene036057:CDS
TATGTGAAACTTCCATAACA+AGG 0.681788 1.4:-56558075 None:intergenic
GAATTGGATAACTTCAATGG+CGG 0.705429 1.4:+56557710 MS.gene036057:CDS
AAGGACAACAGAAGCCCTAG+GGG 0.719502 1.4:-56558123 None:intergenic
TGTATCTGAAGCAGGTACTG+AGG 0.743513 1.4:+56557142 MS.gene036057:CDS
GAGCTATATGTGAATCCATG+AGG 0.761271 1.4:+56557763 MS.gene036057:CDS
ATTCACATATAGCTCCATGG+AGG 0.774024 1.4:-56557755 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATTCAAAAATTTCT+TGG - chr1.4:56556974-56556993 None:intergenic 15.0%
!!! CAAGAAATTTTTGAATTTTT+TGG + chr1.4:56556972-56556991 MS.gene036057:CDS 15.0%
!! ATACAAAGAGTAAATTAACT+TGG - chr1.4:56557871-56557890 None:intergenic 20.0%
!! TCAGATACATCATTAATAAA+TGG - chr1.4:56557131-56557150 None:intergenic 20.0%
!!! GAAATTTTTGAATTTTTTGG+AGG + chr1.4:56556975-56556994 MS.gene036057:CDS 20.0%
! AAAATCTCTTATTGTGATAG+AGG + chr1.4:56557283-56557302 MS.gene036057:CDS 25.0%
! AATTTACTCTTTGTATGCTA+TGG + chr1.4:56557875-56557894 MS.gene036057:CDS 25.0%
! ATTTACTCTTTGTATGCTAT+GGG + chr1.4:56557876-56557895 MS.gene036057:CDS 25.0%
! CATCATTAATAAATGGTAGT+AGG - chr1.4:56557124-56557143 None:intergenic 25.0%
! CTAAGATCACTAATCTTATT+TGG - chr1.4:56557248-56557267 None:intergenic 25.0%
! TAGTTTCATTCAAATGAAGA+TGG + chr1.4:56558043-56558062 MS.gene036057:CDS 25.0%
! TATTTGGATTTGATCCTAAT+TGG + chr1.4:56557219-56557238 MS.gene036057:CDS 25.0%
! TCTTCATTTACATCTACTAT+TGG + chr1.4:56556706-56556725 MS.gene036057:CDS 25.0%
! TGTTTCATTCAATTCTCAAA+AGG + chr1.4:56557045-56557064 MS.gene036057:CDS 25.0%
! TTACACTTTCATACAAGAAT+CGG - chr1.4:56557415-56557434 None:intergenic 25.0%
!! GAGTAAATTAACTTGGTATT+TGG - chr1.4:56557864-56557883 None:intergenic 25.0%
!! TCTGATCTCTTGAATAATTT+TGG - chr1.4:56557667-56557686 None:intergenic 25.0%
!!! ATTTTTGAATTTTTTGGAGG+TGG + chr1.4:56556978-56556997 MS.gene036057:CDS 25.0%
AAAGCTATGAACTTGTAAGA+TGG - chr1.4:56557987-56558006 None:intergenic 30.0%
AAGTTCATAGCTTTCAATAC+AGG + chr1.4:56557993-56558012 MS.gene036057:CDS 30.0%
ACTTCATTCCTAGTTGTTTA+TGG + chr1.4:56557324-56557343 MS.gene036057:CDS 30.0%
ACTTGCAAGATATCTTGAAT+AGG + chr1.4:56557168-56557187 MS.gene036057:CDS 30.0%
AGCATCTGCATTATTGTATT+TGG + chr1.4:56557203-56557222 MS.gene036057:CDS 30.0%
AGTAGATGTAAATGAAGAAG+AGG - chr1.4:56556704-56556723 None:intergenic 30.0%
TATGTGAAACTTCCATAACA+AGG - chr1.4:56558078-56558097 None:intergenic 30.0%
TCTTTACTCATACAACTTCT+AGG - chr1.4:56558020-56558039 None:intergenic 30.0%
TGAGAATTGGATAACTTCAA+TGG + chr1.4:56557707-56557726 MS.gene036057:CDS 30.0%
TGCATGATTCAATGTATTGA+AGG + chr1.4:56556666-56556685 MS.gene036057:CDS 30.0%
! ATCTTATTTGGAAGCCAATT+AGG - chr1.4:56557236-56557255 None:intergenic 30.0%
! ATTAATGATGTATCTGAAGC+AGG + chr1.4:56557134-56557153 MS.gene036057:CDS 30.0%
! ATTGCATTGATAAGCTCAAA+CGG - chr1.4:56557804-56557823 None:intergenic 30.0%
!!! ATAATTTTGGCTTCCACAAT+AGG - chr1.4:56557654-56557673 None:intergenic 30.0%
!!! GCTTTTTTTGACTAGTTTGT+TGG - chr1.4:56557091-56557110 None:intergenic 30.0%
AAATCCGATATACTACCTAG+TGG + chr1.4:56557825-56557844 MS.gene036057:CDS 35.0%
GAATTGGATAACTTCAATGG+CGG + chr1.4:56557710-56557729 MS.gene036057:CDS 35.0%
GTTATGGAAGTTTCACATAC+AGG + chr1.4:56558079-56558098 MS.gene036057:CDS 35.0%
GTTTCAAAACTAGGGTGAAA+TGG - chr1.4:56556818-56556837 None:intergenic 35.0%
TCAATTCTGATTCCCATGTA+TGG + chr1.4:56557006-56557025 MS.gene036057:CDS 35.0%
TCCATGACGTTTCAAAACTA+GGG - chr1.4:56556826-56556845 None:intergenic 35.0%
TGTTTCAACTCATCCTATTG+TGG + chr1.4:56557638-56557657 MS.gene036057:CDS 35.0%
! TCTCTTTTGTTAGCAGGTAA+TGG + chr1.4:56557579-56557598 MS.gene036057:intron 35.0%
! TGGTCAAGAAAAGAAGTACA+AGG + chr1.4:56557370-56557389 MS.gene036057:CDS 35.0%
!! AGCAAGAATTTTGGCAACTA+CGG + chr1.4:56556930-56556949 MS.gene036057:CDS 35.0%
!! CTTTGTAAAAGCACTGATGA+AGG + chr1.4:56557502-56557521 MS.gene036057:CDS 35.0%
AAAGCTTGTGTTTGTGAACC+AGG - chr1.4:56556871-56556890 None:intergenic 40.0%
AAGCTTGTGTTTGTGAACCA+GGG - chr1.4:56556870-56556889 None:intergenic 40.0%
ACTCTTTGTATGCTATGGGA+AGG + chr1.4:56557880-56557899 MS.gene036057:CDS 40.0%
ATAAGCTCAAACGGTACAGT+AGG - chr1.4:56557795-56557814 None:intergenic 40.0%
ATACCAACTATCGGCCAATT+CGG - chr1.4:56556756-56556775 None:intergenic 40.0%
ATCTACTATTGGCGACACAA+TGG + chr1.4:56556717-56556736 MS.gene036057:CDS 40.0%
ATGGAAGTTTCACATACAGG+TGG + chr1.4:56558082-56558101 MS.gene036057:CDS 40.0%
ATTCACATATAGCTCCATGG+AGG - chr1.4:56557758-56557777 None:intergenic 40.0%
CAAAATTCTTGCTTGCGATG+TGG - chr1.4:56556923-56556942 None:intergenic 40.0%
CACTTAGTTCAAGTCTCAGT+TGG + chr1.4:56557604-56557623 MS.gene036057:CDS 40.0%
CCTCTTCTCTTTCCATACAT+GGG - chr1.4:56557021-56557040 None:intergenic 40.0%
CTCCATGACGTTTCAAAACT+AGG - chr1.4:56556827-56556846 None:intergenic 40.0%
CTCTCCACTAGGTAGTATAT+CGG - chr1.4:56557832-56557851 None:intergenic 40.0%
CTGCAGAAATGGTTTCTTGT+TGG + chr1.4:56557350-56557369 MS.gene036057:CDS 40.0%
GACAGTAGCATACCAACTAT+CGG - chr1.4:56556765-56556784 None:intergenic 40.0%
GAGCTATATGTGAATCCATG+AGG + chr1.4:56557763-56557782 MS.gene036057:CDS 40.0%
GCGATGTGGTTAACGTTTAT+TGG - chr1.4:56556909-56556928 None:intergenic 40.0%
GGAAGGATGGAACAAATATG+GGG + chr1.4:56557897-56557916 MS.gene036057:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG + chr1.4:56557932-56557951 MS.gene036057:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG + chr1.4:56557896-56557915 MS.gene036057:CDS 40.0%
GTGCATCACAACATGAGAAT+TGG + chr1.4:56557694-56557713 MS.gene036057:CDS 40.0%
GTTGTCCTTCGAATGAAACA+TGG + chr1.4:56558137-56558156 MS.gene036057:CDS 40.0%
GTTTATGGAAGCTGCAGAAA+TGG + chr1.4:56557339-56557358 MS.gene036057:CDS 40.0%
TCAAGCCATGTTTCATTCGA+AGG - chr1.4:56558145-56558164 None:intergenic 40.0%
TCCTCTTCTCTTTCCATACA+TGG - chr1.4:56557022-56557041 None:intergenic 40.0%
TCGAATGAAACATGGCTTGA+AGG + chr1.4:56558145-56558164 MS.gene036057:CDS 40.0%
TGCAGCTTCCATAAACAACT+AGG - chr1.4:56557335-56557354 None:intergenic 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.4:56557931-56557950 MS.gene036057:CDS 40.0%
TGGATTCACATATAGCTCCA+TGG - chr1.4:56557761-56557780 None:intergenic 40.0%
TGGGAAGGATGGAACAAATA+TGG + chr1.4:56557895-56557914 MS.gene036057:CDS 40.0%
TTTGTATGCTATGGGAAGGA+TGG + chr1.4:56557884-56557903 MS.gene036057:CDS 40.0%
! CACATCGCAAGCAAGAATTT+TGG + chr1.4:56556921-56556940 MS.gene036057:CDS 40.0%
! GATAGTTGGTATGCTACTGT+CGG + chr1.4:56556764-56556783 MS.gene036057:CDS 40.0%
!! GCAAGAATTTTGGCAACTAC+GGG + chr1.4:56556931-56556950 MS.gene036057:CDS 40.0%
!! GTAAAAGCACTGATGAAGGA+AGG + chr1.4:56557506-56557525 MS.gene036057:CDS 40.0%
!! TAGAGGAAGTGCTATTCTAC+AGG + chr1.4:56557300-56557319 MS.gene036057:CDS 40.0%
!!! ACCCTAGTTTTGAAACGTCA+TGG + chr1.4:56556822-56556841 MS.gene036057:CDS 40.0%
!!! CAAGTCTCAGTTGGTTTTTC+TGG + chr1.4:56557613-56557632 MS.gene036057:CDS 40.0%
!!! CTAGTTTTGAAACGTCATGG+AGG + chr1.4:56556825-56556844 MS.gene036057:CDS 40.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.4:56557911-56557930 MS.gene036057:CDS 45.0%
CCCATGTATGGAAAGAGAAG+AGG + chr1.4:56557018-56557037 MS.gene036057:CDS 45.0%
GAAACATGGCTTGAAGGTCA+AGG + chr1.4:56558151-56558170 MS.gene036057:CDS 45.0%
GAAGTTTCACATACAGGTGG+TGG + chr1.4:56558085-56558104 MS.gene036057:CDS 45.0%
GCAGTGAGATTATGCCGAAT+TGG + chr1.4:56556739-56556758 MS.gene036057:CDS 45.0%
GGACTAACATTCTCTCCACT+AGG - chr1.4:56557843-56557862 None:intergenic 45.0%
TACAGTAGGATACAGCCTCA+TGG - chr1.4:56557781-56557800 None:intergenic 45.0%
! GATAAGCTAGTCTACCTCCA+TGG + chr1.4:56557741-56557760 MS.gene036057:CDS 45.0%
! GCACTCTCTCTTTTGTTAGC+AGG + chr1.4:56557573-56557592 MS.gene036057:intron 45.0%
! GGAGGAACGTTTCGATTTGA+AGG + chr1.4:56556843-56556862 MS.gene036057:CDS 45.0%
! TGTATCTGAAGCAGGTACTG+AGG + chr1.4:56557142-56557161 MS.gene036057:CDS 45.0%
!! AATTTTGGCAACTACGGGAG+GGG + chr1.4:56556936-56556955 MS.gene036057:CDS 45.0%
!! AGAATTTTGGCAACTACGGG+AGG + chr1.4:56556934-56556953 MS.gene036057:CDS 45.0%
!! CTTGCTTTTCTCTTCGCGTT+TGG - chr1.4:56557444-56557463 None:intergenic 45.0%
!! GAAGGAAGGTTCTGGAAATG+AGG + chr1.4:56557520-56557539 MS.gene036057:intron 45.0%
!! GAATTTTGGCAACTACGGGA+GGG + chr1.4:56556935-56556954 MS.gene036057:CDS 45.0%
!! GGAGGTAGACTAGCTTATCA+AGG - chr1.4:56557740-56557759 None:intergenic 45.0%
!! TTTCACATACAGGTGGTGGA+AGG + chr1.4:56558089-56558108 MS.gene036057:CDS 45.0%
AAGGACAACAGAAGCCCTAG+GGG - chr1.4:56558126-56558145 None:intergenic 50.0%
ATGCCGAATTGGCCGATAGT+TGG + chr1.4:56556750-56556769 MS.gene036057:CDS 50.0%
CTCTCTGATACCCATCTCTC+AGG - chr1.4:56557945-56557964 None:intergenic 50.0%
GAAGGACAACAGAAGCCCTA+GGG - chr1.4:56558127-56558146 None:intergenic 50.0%
GAGAGATGGGTATCAGAGAG+AGG + chr1.4:56557945-56557964 MS.gene036057:CDS 50.0%
GTGCAGCAGCAGTGAAGAAA+TGG + chr1.4:56557463-56557482 MS.gene036057:CDS 50.0%
! CGTTTCGATTTGAAGGACCC+TGG + chr1.4:56556850-56556869 MS.gene036057:CDS 50.0%
! GCACTGATGAAGGAAGGTTC+TGG + chr1.4:56557512-56557531 MS.gene036057:intron 50.0%
! TGGTTGCAGCTGCCTTGTTA+TGG + chr1.4:56558063-56558082 MS.gene036057:CDS 50.0%
!! ATCTGAAGCAGGTACTGAGG+TGG + chr1.4:56557145-56557164 MS.gene036057:CDS 50.0%
!! ATTTTGGCAACTACGGGAGG+GGG + chr1.4:56556937-56556956 MS.gene036057:CDS 50.0%
AAGGTCACCCTGTAACCCCT+AGG + chr1.4:56558108-56558127 MS.gene036057:CDS 55.0%
ACAGAAGCCCTAGGGGTTAC+AGG - chr1.4:56558119-56558138 None:intergenic 55.0%
AGGTCACCCTGTAACCCCTA+GGG + chr1.4:56558109-56558128 MS.gene036057:CDS 55.0%
CAGAAGCCCTAGGGGTTACA+GGG - chr1.4:56558118-56558137 None:intergenic 55.0%
CGAAGGACAACAGAAGCCCT+AGG - chr1.4:56558128-56558147 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 56556663 56558193 56556663 ID=MS.gene036057
chr1.4 mRNA 56556663 56558193 56556663 ID=MS.gene036057.t1;Parent=MS.gene036057
chr1.4 exon 56556663 56557527 56556663 ID=MS.gene036057.t1.exon1;Parent=MS.gene036057.t1
chr1.4 CDS 56556663 56557527 56556663 ID=cds.MS.gene036057.t1;Parent=MS.gene036057.t1
chr1.4 exon 56557595 56558193 56557595 ID=MS.gene036057.t1.exon2;Parent=MS.gene036057.t1
chr1.4 CDS 56557595 56558193 56557595 ID=cds.MS.gene036057.t1;Parent=MS.gene036057.t1
Gene Sequence

>MS.gene036057

ATGTGCATGATTCAATGTATTGAAGGATTTGTAGCTATCCTCTTCTTCATTTACATCTACTATTGGCGACACAATGGCAGTGAGATTATGCCGAATTGGCCGATAGTTGGTATGCTACTGTCGGTGTTGCGTCATCTGTCAAATTTCAATGACCATTTCACCCTAGTTTTGAAACGTCATGGAGGAACGTTTCGATTTGAAGGACCCTGGTTCACAAACACAAGCTTTATCGCTACTGCTGATCCAATAAACGTTAACCACATCGCAAGCAAGAATTTTGGCAACTACGGGAGGGGGTCTAATAACTTCCAAGAAATTTTTGAATTTTTTGGAGGTGGCATTGTCAATTCTGATTCCCATGTATGGAAAGAGAAGAGGACAATGTTTCATTCAATTCTCAAAAGGAAAAGCTTCAAGAACTTGTTCCAACAAACTAGTCAAAAAAAGCTTGAGAAATTCCTACTACCATTTATTAATGATGTATCTGAAGCAGGTACTGAGGTGGACTTGCAAGATATCTTGAATAGGTTCACTTTTGACAGCATCTGCATTATTGTATTTGGATTTGATCCTAATTGGCTTCCAAATAAGATTAGTGATCTTAGAGAAATTTCATATCAAAAATCTCTTATTGTGATAGAGGAAGTGCTATTCTACAGGAACTTCATTCCTAGTTGTTTATGGAAGCTGCAGAAATGGTTTCTTGTTGGTCAAGAAAAGAAGTACAAGGTAGCTCAAGAAAATCTTGACCGATTCTTGTATGAAAGTGTAACATTTGCCAAACGCGAAGAGAAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATGAATGTTCTTTCAACTTTGTAAAAGCACTGATGAAGGAAGGTTCTGGAAATGAGGTTAGTGAGTGAGAAGTATCTTAGAGACAATGCACTCTCTCTTTTGTTAGCAGGTAATGGTACACTTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATTATTCAAGAGATCAGAGATAATTGTGCATCACAACATGAGAATTGGATAACTTCAATGGCGGAAAGCCTTGATAAGCTAGTCTACCTCCATGGAGCTATATGTGAATCCATGAGGCTGTATCCTACTGTACCGTTTGAGCTTATCAATGCAATCAAATCCGATATACTACCTAGTGGAGAGAATGTTAGTCCAAATACCAAGTTAATTTACTCTTTGTATGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGAGAGGACACATTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGACCTAGAAGTTGTATGAGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTTGCAGCTGCCTTGTTATGGAAGTTTCACATACAGGTGGTGGAAGGTCACCCTGTAACCCCTAGGGCTTCTGTTGTCCTTCGAATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGATGCATTTGA

Protein sequence

>MS.gene036057.t1

MCMIQCIEGFVAILFFIYIYYWRHNGSEIMPNWPIVGMLLSVLRHLSNFNDHFTLVLKRHGGTFRFEGPWFTNTSFIATADPINVNHIASKNFGNYGRGSNNFQEIFEFFGGGIVNSDSHVWKEKRTMFHSILKRKSFKNLFQQTSQKKLEKFLLPFINDVSEAGTEVDLQDILNRFTFDSICIIVFGFDPNWLPNKISDLREISYQKSLIVIEEVLFYRNFIPSCLWKLQKWFLVGQEKKYKVAQENLDRFLYESVTFAKREEKSKCSSSEEMDECSFNFVKALMKEGNGTLSSSLSWFFWLVSTHPIVEAKIIQEIRDNCASQHENWITSMAESLDKLVYLHGAICESMRLYPTVPFELINAIKSDILPSGENVSPNTKLIYSLYAMGRMEQIWGEDCMEFKPERWVSERGHIIHVPSYKFIAFNTGPRSCMSKDLSFIQMKMVAAALLWKFHIQVVEGHPVTPRASVVLRMKHGLKVKVTKRCI