AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000498


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000498.t1 MTR_7g033580 95.508 423 19 0 1 423 74 496 0.0 839
MS.gene000498.t1 MTR_7g033570 88.889 423 47 0 1 423 74 496 0.0 780
MS.gene000498.t1 MTR_8g088470 82.979 423 71 1 1 422 70 492 0.0 738
MS.gene000498.t1 MTR_6g004670 58.879 428 169 3 1 421 78 505 0.0 515
MS.gene000498.t1 MTR_6g004630 57.343 429 176 3 1 423 78 505 1.60e-178 508
MS.gene000498.t1 MTR_6g004610 56.573 426 178 3 1 420 38 462 1.05e-177 504
MS.gene000498.t1 MTR_1g035670 54.186 430 188 3 2 423 76 504 1.05e-171 490
MS.gene000498.t1 MTR_6g004590 53.515 441 186 5 1 423 78 517 4.74e-171 489
MS.gene000498.t1 MTR_6g004600 53.196 438 186 4 4 423 81 517 6.27e-169 484
MS.gene000498.t1 MTR_1g036130 52.194 433 196 3 2 423 76 508 3.97e-168 481
MS.gene000498.t1 MTR_1g035790 54.419 430 187 4 2 423 76 504 2.68e-165 474
MS.gene000498.t1 MTR_1g035760 51.869 428 178 5 2 423 76 481 5.24e-163 468
MS.gene000498.t1 MTR_1g036200 54.419 430 182 6 4 423 76 501 3.36e-162 466
MS.gene000498.t1 MTR_1g035800 53.776 437 185 5 2 421 76 512 1.27e-161 465
MS.gene000498.t1 MTR_1g035580 54.005 437 173 7 2 423 75 498 1.22e-160 462
MS.gene000498.t1 MTR_1g035750 53.118 433 188 3 4 423 77 507 1.73e-158 457
MS.gene000498.t1 MTR_1g036270 51.936 439 193 5 2 423 76 513 5.75e-156 451
MS.gene000498.t1 MTR_1g050362 52.184 435 189 7 3 421 75 506 6.03e-155 448
MS.gene000498.t1 MTR_1g035830 50.688 436 201 4 1 423 75 509 8.28e-155 447
MS.gene000498.t1 MTR_1g036010 50.000 434 205 5 2 423 76 509 4.21e-151 438
MS.gene000498.t1 MTR_1g035940 48.276 435 211 4 2 423 76 509 2.82e-148 431
MS.gene000498.t1 MTR_1g069715 50.735 408 184 6 10 402 1 406 4.56e-146 431
MS.gene000498.t1 MTR_4g012320 80.444 225 44 0 199 423 1 225 5.32e-135 386
MS.gene000498.t1 MTR_1g035860 47.154 369 186 3 3 363 83 450 3.17e-124 369
MS.gene000498.t1 MTR_1g037560 41.839 435 239 4 1 421 109 543 2.85e-119 358
MS.gene000498.t1 MTR_1g037550 40.411 438 243 5 2 421 110 547 2.51e-116 351
MS.gene000498.t1 MTR_4g075110 40.460 435 244 5 1 421 116 549 3.64e-114 345
MS.gene000498.t1 MTR_8g030590 40.275 437 240 8 3 423 81 512 1.18e-106 325
MS.gene000498.t1 MTR_5g070010 38.695 429 251 5 4 423 85 510 6.16e-105 320
MS.gene000498.t1 MTR_8g098435 39.352 432 246 7 3 423 81 507 3.64e-100 308
MS.gene000498.t1 MTR_3g463060 37.705 427 247 5 4 423 90 504 4.13e-99 305
MS.gene000498.t1 MTR_1g060550 36.364 429 253 8 4 421 93 512 8.78e-84 266
MS.gene000498.t1 MTR_7g096340 34.112 428 262 8 4 421 85 502 1.04e-83 265
MS.gene000498.t1 MTR_3g080580 35.227 440 255 10 4 421 86 517 6.95e-83 264
MS.gene000498.t1 MTR_7g096320 34.192 427 263 7 4 421 86 503 8.98e-83 263
MS.gene000498.t1 MTR_4g119660 35.347 447 254 8 7 422 74 516 1.46e-82 263
MS.gene000498.t1 MTR_5g019140 35.123 447 255 8 7 422 89 531 7.25e-82 261
MS.gene000498.t1 MTR_1g070365 34.803 431 256 8 4 421 86 504 3.14e-81 259
MS.gene000498.t1 MTR_7g088330 37.500 432 248 11 4 421 85 508 2.73e-80 256
MS.gene000498.t1 MTR_8g035780 34.180 433 266 8 4 421 82 510 4.40e-80 256
MS.gene000498.t1 MTR_4g054920 34.404 436 256 10 6 422 93 517 2.22e-79 254
MS.gene000498.t1 MTR_7g029275 34.803 431 260 7 4 421 86 508 4.61e-79 253
MS.gene000498.t1 MTR_1g070345 34.562 434 255 9 4 422 86 505 1.68e-78 252
MS.gene000498.t1 MTR_2g086040 33.726 424 262 8 1 418 85 495 3.18e-78 251
MS.gene000498.t1 MTR_8g035820 33.025 433 269 10 6 422 83 510 1.23e-76 247
MS.gene000498.t1 MTR_8g035860 33.718 433 266 10 6 422 83 510 3.85e-76 246
MS.gene000498.t1 MTR_1g102220 32.710 428 265 8 4 416 82 501 2.08e-75 244
MS.gene000498.t1 MTR_8g035810 32.798 436 266 10 6 422 84 511 3.04e-75 243
MS.gene000498.t1 MTR_8g035760 31.235 429 269 10 4 416 88 506 4.89e-68 224
MS.gene000498.t1 MTR_8g035680 30.607 428 274 9 4 416 88 507 2.24e-67 223
MS.gene000498.t1 MTR_8g035810 32.713 376 227 9 6 363 84 451 1.56e-61 206
MS.gene000498.t1 MTR_7g406990 37.908 306 179 5 1 296 92 396 2.21e-61 205
MS.gene000498.t1 MTR_8g035680 29.683 347 223 7 84 416 21 360 1.94e-53 182
MS.gene000498.t1 MTR_1g102210 29.674 337 192 7 94 416 51 356 4.14e-45 160
MS.gene000498.t1 MTR_1g070370 34.921 252 143 5 95 339 5 242 3.20e-43 152
MS.gene000498.t1 MTR_8g035810 30.619 307 190 7 6 295 84 384 9.22e-40 147
MS.gene000498.t1 MTR_7g079440 27.419 434 276 16 7 421 235 648 4.54e-36 140
MS.gene000498.t1 MTR_5g009110 26.160 474 276 17 4 422 117 571 1.68e-35 138
MS.gene000498.t1 MTR_5g009110 25.397 441 257 15 36 422 1 423 1.04e-31 125
MS.gene000498.t1 MTR_1g062190 24.490 441 291 14 2 421 120 539 9.40e-30 121
MS.gene000498.t1 MTR_7g079440 27.966 354 220 12 7 344 235 569 6.82e-28 116
MS.gene000498.t1 MTR_1g050590 42.017 119 63 2 171 284 1 118 2.50e-25 100
MS.gene000498.t1 MTR_1g101040 29.889 271 175 7 155 419 252 513 2.62e-25 108
MS.gene000498.t1 MTR_5g009110 28.783 337 191 13 4 311 117 433 3.53e-25 107
MS.gene000498.t1 MTR_2g062670 33.649 211 125 6 56 264 36 233 7.17e-25 107
MS.gene000498.t1 MTR_6g072490 29.861 288 183 9 139 419 236 511 2.23e-24 105
MS.gene000498.t1 MTR_1g101050 28.889 270 179 7 155 419 248 509 1.08e-23 103
MS.gene000498.t1 MTR_1g040110 42.735 117 64 1 46 159 51 167 1.15e-23 97.4
MS.gene000498.t1 MTR_7g006900 26.840 231 150 5 193 419 255 470 1.95e-23 102
MS.gene000498.t1 MTR_8g046580 46.078 102 52 2 296 396 193 292 5.29e-23 99.0
MS.gene000498.t1 MTR_2g010250 26.936 297 195 9 141 421 215 505 1.12e-22 100
MS.gene000498.t1 MTR_6g084040 45.794 107 39 2 4 109 77 165 1.25e-22 94.4
MS.gene000498.t1 MTR_1g085680 23.744 438 283 13 4 419 106 514 1.23e-21 97.4
MS.gene000498.t1 MTR_5g009110 27.815 302 175 10 36 311 1 285 1.91e-21 94.7
MS.gene000498.t1 MTR_6g017325 23.940 401 256 14 36 419 137 505 5.30e-21 95.5
MS.gene000498.t1 MTR_3g014880 24.031 387 262 12 56 421 148 523 1.05e-20 94.7
MS.gene000498.t1 MTR_2g072270 23.404 423 277 13 21 420 124 522 1.23e-20 94.4
MS.gene000498.t1 MTR_3g093530 21.749 423 308 11 6 420 116 523 2.18e-20 93.6
MS.gene000498.t1 MTR_4g113650 22.738 431 305 9 4 423 108 521 2.74e-20 93.6
MS.gene000498.t1 MTR_2g010290 25.952 289 192 9 141 421 258 532 5.39e-20 92.4
MS.gene000498.t1 MTR_2g072400 24.083 436 287 17 4 420 105 515 5.49e-20 92.4
MS.gene000498.t1 MTR_4g104610 24.000 350 234 10 84 414 155 491 5.55e-20 92.4
MS.gene000498.t1 MTR_6g008500 25.153 326 201 13 92 392 194 501 6.21e-20 92.4
MS.gene000498.t1 MTR_8g008530 25.197 254 171 5 178 420 273 518 1.79e-19 90.9
MS.gene000498.t1 MTR_6g008530 28.085 235 147 6 170 392 271 495 2.75e-19 90.5
MS.gene000498.t1 MTR_8g042000 23.266 447 276 16 4 420 114 523 2.98e-19 90.1
MS.gene000498.t1 MTR_8g104030 25.000 244 157 6 160 387 8 241 4.93e-19 87.0
MS.gene000498.t1 MTR_8g098565 24.818 274 187 7 163 421 237 506 8.14e-19 89.0
MS.gene000498.t1 MTR_7g012860 27.350 234 152 7 162 389 241 462 8.59e-19 89.0
MS.gene000498.t1 MTR_0287s0060 27.350 234 152 7 162 389 241 462 8.59e-19 89.0
MS.gene000498.t1 MTR_1g015860 28.514 249 166 6 180 422 287 529 1.08e-18 88.6
MS.gene000498.t1 MTR_6g008650 27.308 260 171 8 153 400 246 499 1.09e-18 88.6
MS.gene000498.t1 MTR_5g070920 27.068 266 177 7 160 416 233 490 1.37e-18 88.2
MS.gene000498.t1 MTR_5g034900 24.671 304 204 6 141 421 216 517 1.73e-18 87.8
MS.gene000498.t1 MTR_2g072340 22.676 441 287 18 4 420 105 515 2.90e-18 87.4
MS.gene000498.t1 MTR_6g008600 31.050 219 126 8 170 376 270 475 3.33e-18 87.0
MS.gene000498.t1 MTR_0025s0110 25.490 255 177 5 169 419 279 524 3.49e-18 87.0
MS.gene000498.t1 MTR_8g035790 40.816 98 56 2 325 421 1 97 3.92e-18 79.7
MS.gene000498.t1 MTR_6g084770 29.167 240 152 6 160 387 233 466 4.16e-18 86.7
MS.gene000498.t1 MTR_2g010380 24.390 287 199 7 149 421 227 509 5.02e-18 86.7
MS.gene000498.t1 MTR_8g104100 25.221 226 153 5 169 387 6 222 5.81e-18 83.6
MS.gene000498.t1 MTR_6g042610 24.845 322 224 9 92 400 177 493 7.52e-18 85.9
MS.gene000498.t1 MTR_5g070690 25.506 247 167 5 167 403 238 477 1.77e-17 84.7
MS.gene000498.t1 MTR_5g070800 25.506 247 167 5 167 403 238 477 1.77e-17 84.7
MS.gene000498.t1 MTR_2g055430 27.638 199 133 4 224 420 328 517 2.01e-17 84.7
MS.gene000498.t1 MTR_8g063280 26.180 233 163 6 164 390 235 464 2.08e-17 84.7
MS.gene000498.t1 MTR_7g079440 27.273 264 164 9 7 254 235 486 2.53e-17 84.3
MS.gene000498.t1 MTR_0147s0030 23.113 424 287 14 6 414 125 524 2.66e-17 84.3
MS.gene000498.t1 MTR_2g010280 25.614 285 198 6 149 421 221 503 3.06e-17 84.0
MS.gene000498.t1 MTR_5g095230 22.837 416 265 15 31 420 128 513 3.16e-17 84.0
MS.gene000498.t1 MTR_8g042060 26.733 202 131 4 224 420 334 523 4.15e-17 83.6
MS.gene000498.t1 MTR_8g042060 26.733 202 131 4 224 420 298 487 4.50e-17 83.6
MS.gene000498.t1 MTR_5g070830 27.632 228 150 5 170 387 353 575 4.55e-17 84.0
MS.gene000498.t1 MTR_6g008640 23.913 322 221 9 94 400 185 497 4.63e-17 83.6
MS.gene000498.t1 MTR_2g055470 29.412 204 123 5 224 420 328 517 4.96e-17 83.6
MS.gene000498.t1 MTR_2g010330 23.549 293 210 6 141 421 217 507 5.04e-17 83.6
MS.gene000498.t1 MTR_6g042540 27.099 262 165 9 155 400 241 492 5.40e-17 83.2
MS.gene000498.t1 MTR_6g008620 25.000 292 195 9 92 369 187 468 5.78e-17 83.2
MS.gene000498.t1 MTR_6g008430 31.737 167 106 5 211 376 307 466 5.84e-17 83.2
MS.gene000498.t1 MTR_1g036140 41.000 100 53 2 174 268 68 166 5.95e-17 78.6
MS.gene000498.t1 MTR_1g022040 22.248 427 290 12 7 420 105 502 6.29e-17 83.2
MS.gene000498.t1 MTR_2g023680 27.136 199 134 4 224 420 328 517 6.69e-17 83.2
MS.gene000498.t1 MTR_0181s0030 26.724 232 159 6 171 397 248 473 9.52e-17 82.4
MS.gene000498.t1 MTR_8g076290 26.291 213 137 6 172 371 245 450 9.97e-17 82.4
MS.gene000498.t1 MTR_7g098550 23.077 429 286 12 4 422 104 498 1.14e-16 82.4
MS.gene000498.t1 MTR_2g061200 26.407 231 153 6 198 420 307 528 1.20e-16 82.4
MS.gene000498.t1 MTR_8g042020 26.733 202 131 5 224 420 333 522 1.32e-16 82.0
MS.gene000498.t1 MTR_8g036185 24.691 324 218 9 94 397 172 489 1.34e-16 82.0
MS.gene000498.t1 MTR_4g062510 23.248 314 197 9 107 387 175 477 1.72e-16 82.0
MS.gene000498.t1 MTR_7g098550 22.844 429 295 12 4 422 104 506 1.93e-16 81.6
MS.gene000498.t1 MTR_2g072250 27.941 272 158 11 172 420 257 513 2.16e-16 81.6
MS.gene000498.t1 MTR_2g072310 27.132 258 163 9 178 420 103 350 2.18e-16 80.5
MS.gene000498.t1 MTR_2g061750 30.000 190 108 7 1 171 12 195 2.19e-16 77.8
MS.gene000498.t1 MTR_2g061740 30.000 190 108 7 1 171 12 195 2.36e-16 77.8
MS.gene000498.t1 MTR_6g022450 24.047 341 228 10 92 420 177 498 2.49e-16 81.3
MS.gene000498.t1 MTR_2g072380 27.638 199 133 4 224 420 161 350 2.72e-16 80.1
MS.gene000498.t1 MTR_3g104560 29.536 237 153 7 193 422 173 402 2.90e-16 80.5
MS.gene000498.t1 MTR_4g094775 21.944 319 234 6 85 400 161 467 2.93e-16 80.9
MS.gene000498.t1 MTR_4g104540 31.098 164 107 3 208 371 219 376 3.58e-16 80.5
MS.gene000498.t1 MTR_0171s0020 25.540 278 183 8 131 396 208 473 4.78e-16 80.5
MS.gene000498.t1 MTR_4g089055 25.430 291 198 9 89 371 181 460 5.78e-16 80.1
MS.gene000498.t1 MTR_4g018800 25.085 295 193 10 94 371 187 470 5.81e-16 80.1
MS.gene000498.t1 MTR_2g072380 27.638 199 133 4 224 420 301 490 5.90e-16 80.1
MS.gene000498.t1 MTR_7g087520 27.347 245 154 10 160 389 241 476 6.67e-16 80.1
MS.gene000498.t1 MTR_5g070710 25.194 258 177 6 167 416 239 488 7.41e-16 79.7
MS.gene000498.t1 MTR_3g104560 29.536 237 153 7 193 422 308 537 8.25e-16 79.7
MS.gene000498.t1 MTR_6g004570 42.056 107 42 3 170 259 6 109 1.01e-15 77.0
MS.gene000498.t1 MTR_0171s0030 25.969 258 172 8 149 394 138 388 1.28e-15 78.6
MS.gene000498.t1 MTR_3g076530 25.379 264 173 9 167 419 251 501 1.58e-15 79.0
MS.gene000498.t1 MTR_7g012330 24.348 230 155 6 173 396 253 469 1.68e-15 78.6
MS.gene000498.t1 MTR_1g069200 22.963 270 187 6 161 419 251 510 1.70e-15 78.6
MS.gene000498.t1 MTR_5g073250 25.472 212 144 4 183 390 263 464 2.13e-15 78.6
MS.gene000498.t1 MTR_4g104550 25.000 296 201 8 84 371 155 437 3.62e-15 77.8
MS.gene000498.t1 MTR_7g103450 28.750 240 152 9 187 420 280 506 4.42e-15 77.4
MS.gene000498.t1 MTR_8g469360 23.721 430 285 14 8 420 20 423 4.67e-15 77.0
MS.gene000498.t1 MTR_4g104570 31.788 151 97 3 221 371 1 145 4.71e-15 73.9
MS.gene000498.t1 MTR_5g073320 25.943 212 143 4 183 390 264 465 5.24e-15 77.0
MS.gene000498.t1 MTR_7g075610 28.641 206 127 6 193 390 274 467 5.40e-15 77.0
MS.gene000498.t1 MTR_2g010320 23.630 292 201 9 144 421 220 503 6.23e-15 77.0
MS.gene000498.t1 MTR_5g070700 25.191 262 174 7 167 416 240 491 6.56e-15 77.0
MS.gene000498.t1 MTR_2g010300 23.860 285 189 7 149 421 221 489 7.82e-15 76.6
MS.gene000498.t1 MTR_8g012585 22.868 258 187 5 171 421 197 449 1.34e-14 75.9
MS.gene000498.t1 MTR_8g012970 26.667 240 162 6 169 407 247 473 1.45e-14 75.9
MS.gene000498.t1 MTR_4g077210 22.995 374 253 13 12 375 103 451 1.55e-14 75.9
MS.gene000498.t1 MTR_6g084900 23.377 231 162 5 167 387 3 228 1.66e-14 73.9
MS.gene000498.t1 MTR_2g072260 26.961 204 128 5 224 420 321 510 1.69e-14 75.5
MS.gene000498.t1 MTR_8g089800 27.049 244 159 7 166 400 237 470 1.73e-14 75.5
MS.gene000498.t1 MTR_5g094550 25.943 212 143 4 183 390 263 464 1.84e-14 75.5
MS.gene000498.t1 MTR_5g470730 27.273 198 130 3 160 347 233 426 2.05e-14 75.1
MS.gene000498.t1 MTR_3g057860 23.864 264 186 7 162 416 240 497 2.14e-14 75.5
MS.gene000498.t1 MTR_2g062680 30.657 137 64 2 212 347 31 137 2.42e-14 71.6
MS.gene000498.t1 MTR_0171s0010 30.180 222 137 8 181 396 266 475 2.85e-14 75.1
MS.gene000498.t1 MTR_1g091023 24.545 220 154 6 172 389 248 457 3.78e-14 74.3
MS.gene000498.t1 MTR_8g042040 26.344 186 120 4 240 420 333 506 3.80e-14 74.7
MS.gene000498.t1 MTR_1g091003 24.312 218 157 5 172 389 248 457 3.81e-14 74.3
MS.gene000498.t1 MTR_1g023730 25.092 271 167 11 169 421 260 512 4.29e-14 74.3
MS.gene000498.t1 MTR_4g088400 26.190 252 173 7 155 400 250 494 4.56e-14 74.3
MS.gene000498.t1 MTR_4g088420 26.519 181 127 3 221 400 31 206 4.61e-14 72.0
MS.gene000498.t1 MTR_5g007460 22.857 245 160 4 153 397 232 447 4.66e-14 74.3
MS.gene000498.t1 MTR_4g133750 25.106 235 154 7 169 391 244 468 5.34e-14 73.9
MS.gene000498.t1 MTR_4g048580 27.094 203 139 4 169 371 252 445 5.62e-14 73.9
MS.gene000498.t1 MTR_1g091010 24.545 220 154 6 172 389 247 456 6.59e-14 73.9
MS.gene000498.t1 MTR_5g016410 24.739 287 199 8 93 375 169 442 1.27e-13 72.8
MS.gene000498.t1 MTR_6g035100 25.110 227 160 5 167 390 244 463 1.91e-13 72.4
MS.gene000498.t1 MTR_5g094540 24.528 212 146 4 183 390 263 464 2.02e-13 72.4
MS.gene000498.t1 MTR_6g034965 23.810 231 166 5 163 390 240 463 2.87e-13 71.6
MS.gene000498.t1 MTR_3g057800 25.751 233 157 6 167 390 238 463 2.88e-13 71.6
MS.gene000498.t1 MTR_1g107295 20.579 311 206 7 107 387 176 475 3.26e-13 71.6
MS.gene000498.t1 MTR_5g094520 24.528 212 146 4 183 390 294 495 4.21e-13 71.2
MS.gene000498.t1 MTR_5g094520 24.528 212 146 4 183 390 189 390 4.48e-13 70.9
MS.gene000498.t1 MTR_2g072420 28.671 143 96 3 283 423 5 143 4.72e-13 66.6
MS.gene000498.t1 MTR_4g089030 25.366 205 144 5 169 371 265 462 6.11e-13 70.9
MS.gene000498.t1 MTR_6g034940 25.203 246 168 7 166 404 230 466 6.38e-13 70.9
MS.gene000498.t1 MTR_3g076560 25.258 194 137 4 180 371 273 460 6.85e-13 70.9
MS.gene000498.t1 MTR_2g031920 25.984 254 178 6 169 422 245 488 7.78e-13 70.5
MS.gene000498.t1 MTR_1g035140 28.139 231 138 12 171 391 251 463 8.31e-13 70.5
MS.gene000498.t1 MTR_6g008630 26.702 191 134 3 211 400 224 409 9.14e-13 70.1
MS.gene000498.t1 MTR_5g094560 26.415 212 142 4 183 390 263 464 9.79e-13 70.1
MS.gene000498.t1 MTR_4g088405 25.357 280 190 6 130 400 139 408 1.02e-12 69.7
MS.gene000498.t1 MTR_0022s0290 27.136 199 137 6 185 382 281 472 1.17e-12 70.1
MS.gene000498.t1 MTR_2g450040 24.490 294 188 10 120 388 193 477 1.31e-12 69.7
MS.gene000498.t1 MTR_3g467140 24.731 186 135 3 193 378 122 302 1.68e-12 68.6
MS.gene000498.t1 MTR_5g018500 23.457 162 117 4 233 392 4 160 1.70e-12 66.6
MS.gene000498.t1 MTR_4g088425 28.916 249 164 9 155 397 233 474 1.80e-12 69.3
MS.gene000498.t1 MTR_5g007450 23.529 238 143 6 157 390 259 461 1.99e-12 69.3
MS.gene000498.t1 MTR_5g070840 31.933 119 76 2 271 387 21 136 2.55e-12 65.5
MS.gene000498.t1 MTR_4g078110 30.128 156 99 4 218 371 275 422 2.82e-12 68.6
MS.gene000498.t1 MTR_1g107300 23.164 177 120 4 227 398 9 174 2.83e-12 66.2
MS.gene000498.t1 MTR_7g027960 24.885 217 147 8 181 387 253 463 2.97e-12 68.6
MS.gene000498.t1 MTR_1g037370 27.962 211 125 9 169 371 248 439 3.11e-12 68.6
MS.gene000498.t1 MTR_4g031820 25.941 239 154 6 193 420 301 527 3.76e-12 68.6
MS.gene000498.t1 MTR_5g091760 20.765 366 252 11 38 399 123 454 3.95e-12 68.2
MS.gene000498.t1 MTR_7g075580 25.000 228 153 7 170 390 250 466 5.23e-12 67.8
MS.gene000498.t1 MTR_3g467140 24.731 186 135 3 193 378 255 435 5.29e-12 67.8
MS.gene000498.t1 MTR_5g056720 26.953 256 147 10 173 416 193 420 5.66e-12 67.4
MS.gene000498.t1 MTR_4g026080 27.326 172 115 6 221 390 1 164 5.84e-12 65.1
MS.gene000498.t1 MTR_5g095260 23.324 343 234 12 55 390 145 465 6.24e-12 67.8
MS.gene000498.t1 MTR_2g073420 24.664 223 157 5 170 390 258 471 7.55e-12 67.4
MS.gene000498.t1 MTR_7g028020 24.000 225 155 8 181 395 253 471 7.82e-12 67.4
MS.gene000498.t1 MTR_5g007550 22.857 245 150 6 157 397 259 468 9.10e-12 67.0
MS.gene000498.t1 MTR_4g031820 26.901 171 108 5 260 420 342 505 1.03e-11 67.0
MS.gene000498.t1 MTR_2g437840 29.070 172 106 5 211 377 289 449 1.07e-11 67.0
MS.gene000498.t1 MTR_3g058220 25.397 252 155 11 157 391 229 464 1.15e-11 67.0
MS.gene000498.t1 MTR_5g070850 21.395 215 157 3 174 381 250 459 1.20e-11 66.6
MS.gene000498.t1 MTR_5g070973 31.250 112 76 1 271 382 21 131 1.27e-11 63.5
MS.gene000498.t1 MTR_4g095050 24.055 291 199 11 92 375 171 446 1.59e-11 66.2
MS.gene000498.t1 MTR_2g073480 24.201 219 159 4 171 389 164 375 1.60e-11 65.9
MS.gene000498.t1 MTR_2g073440 24.201 219 159 4 171 389 231 442 1.99e-11 65.9
MS.gene000498.t1 MTR_5g072980 22.776 281 188 8 152 421 240 502 2.81e-11 65.5
MS.gene000498.t1 MTR_5g072930 22.776 281 188 8 152 421 240 502 2.81e-11 65.5
MS.gene000498.t1 MTR_7g075540 27.074 229 139 9 171 390 255 464 3.52e-11 65.5
MS.gene000498.t1 MTR_0638s0020 22.540 315 220 9 83 387 90 390 3.78e-11 65.1
MS.gene000498.t1 MTR_1g103670 22.660 203 146 5 171 371 249 442 5.45e-11 64.7
MS.gene000498.t1 MTR_1g031710 26.190 168 117 4 180 346 67 228 5.50e-11 63.5
MS.gene000498.t1 MTR_3g057970 22.907 227 153 8 169 391 246 454 5.69e-11 64.7
MS.gene000498.t1 MTR_1g097220 24.074 270 180 11 163 423 277 530 7.15e-11 64.3
MS.gene000498.t1 MTR_3g076550 24.528 265 168 10 158 417 238 475 7.40e-11 64.3
MS.gene000498.t1 MTR_3g057910 22.018 218 163 4 179 396 263 473 7.76e-11 64.3
MS.gene000498.t1 MTR_8g077810 22.356 331 223 10 82 401 156 463 8.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000498.t1 AT2G23180 49.312 436 207 3 1 422 78 513 1.48e-149 434
MS.gene000498.t1 AT4G39490 48.416 442 209 4 1 423 77 518 5.93e-147 428
MS.gene000498.t1 AT4G39480 47.836 439 213 3 1 423 77 515 2.51e-144 421
MS.gene000498.t1 AT2G21910 46.789 436 216 5 1 423 76 508 1.61e-137 404
MS.gene000498.t1 AT1G47620 46.420 433 218 5 1 421 85 515 1.10e-134 397
MS.gene000498.t1 AT4G39500 44.931 434 222 4 1 421 37 466 2.99e-134 394
MS.gene000498.t1 AT4G39500 44.931 434 222 4 1 421 87 516 2.15e-133 393
MS.gene000498.t1 AT4G32170 44.548 431 226 4 1 421 76 503 1.13e-131 389
MS.gene000498.t1 AT1G65340 45.266 433 216 4 1 420 78 502 3.48e-131 387
MS.gene000498.t1 AT5G52320 45.940 431 213 4 2 420 79 501 1.16e-129 383
MS.gene000498.t1 AT4G39510 43.187 433 231 3 1 421 76 505 1.89e-128 380
MS.gene000498.t1 AT5G52320 45.775 426 211 4 2 415 79 496 4.72e-128 379
MS.gene000498.t1 AT1G57750 42.890 429 226 3 2 421 78 496 8.99e-126 373
MS.gene000498.t1 AT5G02900 41.190 437 217 7 1 421 67 479 1.70e-109 331
MS.gene000498.t1 AT5G08250 39.318 440 245 8 1 423 46 480 1.71e-107 326
MS.gene000498.t1 AT5G08250 39.318 440 245 8 1 423 108 542 8.23e-107 326
MS.gene000498.t1 AT5G23190 36.842 437 261 5 1 423 107 542 3.66e-104 320
MS.gene000498.t1 AT1G63710 39.080 435 247 8 2 423 80 509 3.40e-103 316
MS.gene000498.t1 AT3G26125 40.045 447 232 11 6 423 95 534 2.81e-102 314
MS.gene000498.t1 AT5G58860 38.318 428 252 5 4 422 85 509 5.56e-102 313
MS.gene000498.t1 AT1G24540 38.106 433 251 6 4 421 90 520 2.59e-100 309
MS.gene000498.t1 AT2G45970 38.673 437 247 7 3 423 81 512 5.81e-100 308
MS.gene000498.t1 AT4G00360 38.303 436 251 6 3 423 81 513 3.28e-99 307
MS.gene000498.t1 AT1G01600 38.128 438 251 7 3 423 81 515 9.44e-99 306
MS.gene000498.t1 AT1G13140 38.128 438 245 10 6 423 95 526 5.62e-98 303
MS.gene000498.t1 AT1G13150 38.813 438 242 10 6 423 88 519 3.06e-96 298
MS.gene000498.t1 AT1G13140 37.296 429 235 9 6 423 95 500 4.12e-95 295
MS.gene000498.t1 AT1G57750 40.336 357 194 3 2 349 78 424 4.16e-92 285
MS.gene000498.t1 AT2G27690 35.417 432 260 8 1 422 73 495 3.11e-85 269
MS.gene000498.t1 AT3G56630 36.468 436 253 12 1 422 74 499 1.43e-82 262
MS.gene000498.t1 AT1G69500 33.188 458 257 8 7 422 74 524 4.07e-81 259
MS.gene000498.t1 AT1G34540 36.009 436 252 13 2 422 75 498 1.59e-80 257
MS.gene000498.t1 AT3G48520 34.642 433 255 9 4 422 82 500 2.19e-80 257
MS.gene000498.t1 AT2G45510 35.092 436 259 11 4 422 81 509 2.15e-79 254
MS.gene000498.t1 AT2G44890 34.404 436 262 11 4 422 81 509 4.03e-79 253
MS.gene000498.t1 AT5G63450 34.873 433 253 11 4 421 84 502 4.97e-78 251
MS.gene000498.t1 AT5G63450 34.873 433 253 11 4 421 142 560 2.40e-77 250
MS.gene000498.t1 AT2G44890 33.643 431 254 10 4 422 81 491 1.14e-75 244
MS.gene000498.t1 AT3G01900 33.724 427 260 9 4 421 78 490 6.70e-73 237
MS.gene000498.t1 AT1G31800 26.941 438 285 15 2 422 151 570 1.27e-36 141
MS.gene000498.t1 AT3G53130 26.484 438 286 17 2 421 120 539 2.56e-32 129
MS.gene000498.t1 AT4G15110 24.684 474 284 17 4 422 124 579 1.31e-29 121
MS.gene000498.t1 AT2G26710 23.776 429 292 12 4 420 109 514 1.81e-23 102
MS.gene000498.t1 AT5G51900 39.394 132 65 1 143 259 3 134 8.18e-23 97.1
MS.gene000498.t1 AT2G46950 23.557 433 287 13 4 419 163 568 6.39e-22 98.6
MS.gene000498.t1 AT5G52400 29.167 264 170 8 163 419 264 517 8.32e-22 98.2
MS.gene000498.t1 AT3G48300 26.074 326 226 9 94 416 164 477 3.93e-21 95.9
MS.gene000498.t1 AT3G48300 26.074 326 226 9 94 416 166 479 3.97e-21 95.9
MS.gene000498.t1 AT4G13310 27.817 284 187 8 94 371 171 442 3.46e-19 90.1
MS.gene000498.t1 AT3G61040 28.302 212 145 5 180 390 255 460 4.87e-19 89.7
MS.gene000498.t1 AT5G24910 25.564 266 173 8 169 421 279 532 5.36e-19 89.7
MS.gene000498.t1 AT1G64940 23.549 293 211 5 139 422 222 510 5.83e-19 89.4
MS.gene000498.t1 AT5G24900 23.666 431 280 14 12 418 2 407 1.12e-18 87.8
MS.gene000498.t1 AT5G24900 23.733 434 282 14 9 418 116 524 1.13e-18 88.6
MS.gene000498.t1 AT2G27000 24.646 353 243 11 83 423 167 508 1.65e-18 88.2
MS.gene000498.t1 AT2G14100 27.027 296 198 10 102 391 189 472 2.49e-18 87.4
MS.gene000498.t1 AT4G13290 26.298 289 191 8 87 371 165 435 5.22e-18 86.3
MS.gene000498.t1 AT3G14680 23.502 434 287 15 4 420 106 511 6.58e-18 86.3
MS.gene000498.t1 AT3G20140 25.649 308 212 9 83 386 170 464 7.77e-18 85.9
MS.gene000498.t1 AT3G14640 25.954 262 169 7 169 420 289 535 1.19e-17 85.5
MS.gene000498.t1 AT3G14640 25.954 262 169 7 169 420 267 513 1.38e-17 85.1
MS.gene000498.t1 AT3G14660 26.556 241 164 5 184 420 134 365 3.48e-17 83.2
MS.gene000498.t1 AT3G25180 25.397 252 175 5 156 400 238 483 3.64e-17 84.0
MS.gene000498.t1 AT4G27710 28.679 265 158 10 166 418 269 514 5.77e-17 83.2
MS.gene000498.t1 AT1G64950 23.841 302 204 6 141 422 214 509 6.02e-17 83.2
MS.gene000498.t1 AT4G15350 26.749 243 162 8 190 423 269 504 6.94e-17 83.2
MS.gene000498.t1 AT3G14660 26.556 241 164 5 184 420 280 511 8.38e-17 82.8
MS.gene000498.t1 AT4G37410 24.478 335 227 10 58 386 135 449 8.43e-17 82.8
MS.gene000498.t1 AT2G27010 25.532 329 220 12 70 388 135 448 9.41e-17 82.8
MS.gene000498.t1 AT3G14690 27.076 277 155 9 177 420 249 511 1.33e-16 82.0
MS.gene000498.t1 AT2G46960 21.528 432 301 12 4 419 106 515 1.35e-16 82.0
MS.gene000498.t1 AT3G32047 26.688 311 203 11 90 391 176 470 1.40e-16 82.0
MS.gene000498.t1 AT3G14690 27.076 277 155 9 177 420 284 546 1.45e-16 82.0
MS.gene000498.t1 AT5G38450 28.261 184 113 4 241 419 345 514 2.58e-16 81.3
MS.gene000498.t1 AT5G06900 24.806 258 174 8 144 394 221 465 2.72e-16 81.3
MS.gene000498.t1 AT4G37340 25.000 296 184 9 93 375 170 440 2.77e-16 81.3
MS.gene000498.t1 AT4G37400 25.225 333 227 10 58 386 135 449 4.28e-16 80.5
MS.gene000498.t1 AT3G14650 27.236 246 156 6 184 420 280 511 5.23e-16 80.5
MS.gene000498.t1 AT3G14630 25.468 267 176 7 163 420 255 507 6.14e-16 80.1
MS.gene000498.t1 AT3G14630 25.468 267 176 7 163 420 310 562 6.39e-16 80.1
MS.gene000498.t1 AT3G20940 27.074 229 153 6 162 382 246 468 7.02e-16 80.1
MS.gene000498.t1 AT3G14620 28.807 243 151 7 180 413 278 507 7.89e-16 79.7
MS.gene000498.t1 AT2G45580 24.576 236 158 6 162 390 96 318 8.04e-16 79.0
MS.gene000498.t1 AT3G20110 26.087 299 204 9 83 377 167 452 1.13e-15 79.3
MS.gene000498.t1 AT4G31950 24.335 263 176 9 150 400 231 482 1.25e-15 79.3
MS.gene000498.t1 AT2G45580 24.576 236 158 6 162 390 250 472 1.49e-15 79.0
MS.gene000498.t1 AT4G31940 24.206 252 175 6 160 400 248 494 1.68e-15 79.0
MS.gene000498.t1 AT3G61880 24.528 212 149 6 180 387 288 492 2.19e-15 78.6
MS.gene000498.t1 AT3G61880 24.528 212 149 6 180 387 288 492 2.90e-15 78.2
MS.gene000498.t1 AT1G01190 28.125 192 126 7 225 411 333 517 3.34e-15 77.8
MS.gene000498.t1 AT1G50520 23.907 343 233 14 48 377 138 465 3.58e-15 77.8
MS.gene000498.t1 AT1G01190 28.125 192 126 7 225 411 338 522 3.86e-15 77.8
MS.gene000498.t1 AT3G20120 25.980 204 139 5 180 377 264 461 4.23e-15 77.4
MS.gene000498.t1 AT3G20120 25.980 204 139 5 180 377 128 325 4.24e-15 77.0
MS.gene000498.t1 AT3G20120 25.980 204 139 5 180 377 128 325 4.24e-15 77.0
MS.gene000498.t1 AT3G20120 25.980 204 139 5 180 377 128 325 4.24e-15 77.0
MS.gene000498.t1 AT4G13770 23.830 235 166 5 165 394 241 467 4.34e-15 77.4
MS.gene000498.t1 AT2G46960 25.191 262 175 7 167 419 150 399 4.43e-15 77.0
MS.gene000498.t1 AT2G25160 27.365 296 190 10 89 369 173 458 4.71e-15 77.4
MS.gene000498.t1 AT1G67110 25.778 225 148 4 200 419 298 508 9.10e-15 76.6
MS.gene000498.t1 AT3G14610 25.769 260 169 8 171 420 266 511 1.19e-14 76.3
MS.gene000498.t1 AT5G35715 27.155 232 153 6 162 387 176 397 1.22e-14 75.9
MS.gene000498.t1 AT1G64930 25.991 227 159 6 201 422 288 510 1.96e-14 75.5
MS.gene000498.t1 AT5G10610 26.638 229 153 6 160 386 235 450 2.31e-14 75.1
MS.gene000498.t1 AT2G12190 23.026 304 206 7 141 422 214 511 3.58e-14 74.7
MS.gene000498.t1 AT3G48270 24.373 279 201 6 91 369 163 431 3.75e-14 74.7
MS.gene000498.t1 AT4G39950 25.410 244 171 6 160 397 267 505 4.06e-14 74.7
MS.gene000498.t1 AT2G45550 25.751 233 159 6 197 423 286 510 4.09e-14 74.7
MS.gene000498.t1 AT2G24180 23.381 278 190 8 147 414 227 491 4.43e-14 74.3
MS.gene000498.t1 AT3G26270 25.000 240 164 6 160 392 240 470 4.83e-14 74.3
MS.gene000498.t1 AT5G10600 23.684 342 224 11 102 419 176 504 5.03e-14 74.3
MS.gene000498.t1 AT1G33730 23.616 271 189 6 121 391 84 336 5.07e-14 73.6
MS.gene000498.t1 AT1G33730 23.616 271 189 6 121 391 84 336 5.07e-14 73.6
MS.gene000498.t1 AT4G39950 25.410 244 171 6 160 397 307 545 5.36e-14 74.3
MS.gene000498.t1 AT3G20935 29.070 172 111 5 221 388 134 298 5.37e-14 73.2
MS.gene000498.t1 AT2G46660 25.234 214 148 6 180 389 288 493 6.93e-14 73.9
MS.gene000498.t1 AT3G26830 23.207 237 163 6 160 387 232 458 1.43e-13 72.8
MS.gene000498.t1 AT2G45560 25.714 280 182 8 155 422 244 509 1.56e-13 72.8
MS.gene000498.t1 AT5G09970 23.828 256 181 7 169 420 289 534 2.69e-13 72.0
MS.gene000498.t1 AT2G45570 23.929 280 189 6 154 421 242 509 4.10e-13 71.2
MS.gene000498.t1 AT2G30770 27.624 181 126 3 219 399 293 468 4.89e-13 71.2
MS.gene000498.t1 AT4G37330 29.167 216 115 7 169 375 251 437 5.78e-13 70.9
MS.gene000498.t1 AT5G06905 27.642 246 152 9 169 397 248 484 6.51e-13 70.9
MS.gene000498.t1 AT4G37310 23.263 331 211 12 85 396 162 468 8.84e-13 70.5
MS.gene000498.t1 AT2G26170 26.587 252 170 8 178 421 194 438 8.94e-13 70.1
MS.gene000498.t1 AT2G26170 26.587 252 170 8 178 421 277 521 1.22e-12 70.1
MS.gene000498.t1 AT1G13080 22.436 312 227 6 84 387 40 344 1.83e-12 68.9
MS.gene000498.t1 AT4G15360 26.442 208 142 6 174 377 259 459 2.52e-12 68.9
MS.gene000498.t1 AT2G23190 24.458 323 220 10 58 375 181 484 2.70e-12 68.9
MS.gene000498.t1 AT1G33720 24.762 210 146 5 220 423 200 403 2.81e-12 68.6
MS.gene000498.t1 AT1G13080 22.876 306 221 6 90 387 164 462 3.06e-12 68.6
MS.gene000498.t1 AT3G03470 24.242 198 145 2 203 396 285 481 3.14e-12 68.6
MS.gene000498.t1 AT3G48280 21.116 251 188 5 150 397 216 459 3.42e-12 68.6
MS.gene000498.t1 AT3G48310 22.930 314 220 8 91 398 164 461 4.35e-12 68.2
MS.gene000498.t1 AT3G20100 26.804 194 130 5 190 377 275 462 5.98e-12 67.8
MS.gene000498.t1 AT4G12310 25.221 226 151 8 170 389 264 477 9.69e-12 67.0
MS.gene000498.t1 AT3G28740 27.313 227 146 7 162 386 247 456 1.24e-11 66.6
MS.gene000498.t1 AT3G26200 28.293 205 132 5 194 392 271 466 1.49e-11 66.6
MS.gene000498.t1 AT3G48290 24.068 295 182 8 91 369 165 433 1.67e-11 66.2
MS.gene000498.t1 AT5G67310 26.087 207 136 6 169 375 262 451 3.37e-11 65.5
MS.gene000498.t1 AT3G26280 25.854 205 138 5 194 392 275 471 5.91e-11 64.7
MS.gene000498.t1 AT3G26280 25.854 205 138 5 194 392 292 488 6.03e-11 64.7
MS.gene000498.t1 AT1G13710 23.733 375 252 15 62 423 161 514 7.88e-11 64.3

Find 77 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTTGCATTTCTCTTT+TGG 0.141728 7.1:-64109229 None:intergenic
GCTCTCTCACATGCAATTTC+AGG 0.167970 7.1:-64109057 None:intergenic
AGAATCTTGGCTTCGATAAA+AGG 0.210597 7.1:-64109414 None:intergenic
GACATGTAAAACCAAGATTT+TGG 0.229523 7.1:+64109112 MS.gene000498:CDS
GAACAAAGTTGGAAAGATTT+AGG 0.232318 7.1:+64109468 MS.gene000498:CDS
AACAGAAAGACTTGGGATTA+TGG 0.242660 7.1:-64109880 None:intergenic
TCGGAAGGGTCAAGGAAATA+TGG 0.252579 7.1:+64109658 MS.gene000498:CDS
TTCCAACTTTGTTCCCTTGA+TGG 0.257412 7.1:-64109459 None:intergenic
AGCACAAAATTCGAAAACTA+TGG 0.281400 7.1:+64108733 MS.gene000498:CDS
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.1:+64109806 MS.gene000498:CDS
TTTGATCTCTTCAAGAATCT+TGG 0.314143 7.1:-64109427 None:intergenic
AGTGATGTGTTGCACGTTCA+TGG 0.342543 7.1:-64108710 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7.1:+64109773 MS.gene000498:CDS
TGCAGCTTCCACCAAAATCT+TGG 0.354262 7.1:-64109123 None:intergenic
ACAGAAAGACTTGGGATTAT+GGG 0.372992 7.1:-64109879 None:intergenic
CGATTAGCTCGGGCCTTACT+TGG 0.388898 7.1:+64109367 MS.gene000498:CDS
AATGCAGATTTATGCTCTAA+AGG 0.389672 7.1:-64109564 None:intergenic
TTCTTAGAAATCCACCTCTC+TGG 0.395719 7.1:-64109705 None:intergenic
AGTTCAATAGAAAGACAATT+AGG 0.403320 7.1:-64109033 None:intergenic
TTTGGTGGAAGCTGCAGAAA+TGG 0.410841 7.1:+64109130 MS.gene000498:CDS
TGGAAAGATTTAGGAGCAAA+AGG 0.414918 7.1:+64109477 MS.gene000498:CDS
ATGTGCTTCCTAGTGGGCAT+AGG 0.416309 7.1:+64109595 MS.gene000498:CDS
AAGTTCATTGCTTTCAATGC+TGG 0.422395 7.1:+64109756 MS.gene000498:CDS
AGCAAGTTAATTTATTTACA+TGG 0.435812 7.1:+64109504 MS.gene000498:CDS
AGCCTTGAGGCTTTATCCTC+CGG 0.446796 7.1:+64109539 MS.gene000498:CDS
GAAAGCAATGAACTTGTAAG+AGG 0.446809 7.1:-64109748 None:intergenic
CGGAAGGGTCAAGGAAATAT+GGG 0.460149 7.1:+64109659 MS.gene000498:CDS
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7.1:+64109774 MS.gene000498:CDS
AGGTGGATTTCTAAGAAAGG+AGG 0.470482 7.1:+64109711 MS.gene000498:CDS
TACCATCAAGGGAACAAAGT+TGG 0.470971 7.1:+64109457 MS.gene000498:CDS
GAATCTTGGCTTCGATAAAA+GGG 0.471732 7.1:-64109413 None:intergenic
CTCTCTCACATGCAATTTCA+GGG 0.473701 7.1:-64109056 None:intergenic
TCAAAGAAAATTTACCATCA+AGG 0.477949 7.1:+64109445 MS.gene000498:CDS
ACACATGAAACATGGCTTGA+AGG 0.478348 7.1:+64109908 MS.gene000498:CDS
GATTTATGCTCTAAAGGAAC+CGG 0.481253 7.1:-64109558 None:intergenic
GTGATGTGTTGCACGTTCAT+GGG 0.481553 7.1:-64108709 None:intergenic
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7.1:+64109779 MS.gene000498:CDS
GAGAGGTGGATTTCTAAGAA+AGG 0.501802 7.1:+64109708 MS.gene000498:CDS
GGTGGATTTCTAAGAAAGGA+GGG 0.505417 7.1:+64109712 MS.gene000498:CDS
TCAATCAATCTACTTGCAGC+TGG 0.507399 7.1:+64109336 MS.gene000498:CDS
TGTGCTTCCTAGTGGGCATA+GGG 0.508071 7.1:+64109596 MS.gene000498:CDS
TTGCACGTTCATGGGGTCAC+TGG 0.508498 7.1:-64108701 None:intergenic
AATATCATTATGAATGAAGC+AGG 0.509091 7.1:+64109270 MS.gene000498:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.1:+64109674 MS.gene000498:CDS
CAAAGAAAATTTACCATCAA+GGG 0.523160 7.1:+64109446 MS.gene000498:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.527361 7.1:+64109478 MS.gene000498:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7.1:-64109780 None:intergenic
GCACAAAATTCGAAAACTAT+GGG 0.543693 7.1:+64108734 MS.gene000498:CDS
ATTATGAATGAAGCAGGAGA+TGG 0.551989 7.1:+64109276 MS.gene000498:CDS
TGGAAGAGATACGATTAGCT+CGG 0.552434 7.1:+64109356 MS.gene000498:CDS
CTGCAGAAATGGTTTCAAGT+TGG 0.558446 7.1:+64109141 MS.gene000498:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.1:+64109643 MS.gene000498:CDS
GATTTAACCCTATGCCCACT+AGG 0.564899 7.1:-64109603 None:intergenic
GGAAGAGATACGATTAGCTC+GGG 0.565560 7.1:+64109357 MS.gene000498:CDS
TATTTCCTTGACCCTTCCGA+CGG 0.569792 7.1:-64109655 None:intergenic
ATACTCCGTCGGAAGGGTCA+AGG 0.570710 7.1:+64109650 MS.gene000498:CDS
TACATAACATATATTGTCAA+AGG 0.575867 7.1:-64108995 None:intergenic
TGTAAAACAACAGAAAGACT+TGG 0.577617 7.1:-64109888 None:intergenic
TTCTCTATACTCCGTCGGAA+GGG 0.590045 7.1:+64109644 MS.gene000498:CDS
TGGAATTTAAACCAGAGAGG+TGG 0.591655 7.1:+64109694 MS.gene000498:CDS
AAATTCGAAAACTATGGGAA+AGG 0.592062 7.1:+64108739 MS.gene000498:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.1:+64109526 MS.gene000498:CDS
AAATCTGATGTGCTTCCTAG+TGG 0.599783 7.1:+64109588 MS.gene000498:CDS
GAATTATCACATTCAAGTGG+TGG 0.608088 7.1:+64109848 MS.gene000498:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7.1:+64109845 MS.gene000498:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.1:+64109639 MS.gene000498:CDS
GTAAAACAACAGAAAGACTT+GGG 0.613688 7.1:-64109887 None:intergenic
AAAGCAATGAACTTGTAAGA+GGG 0.614350 7.1:-64109747 None:intergenic
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.1:+64109763 MS.gene000498:CDS
GAGAGCATTTACTCAAGCAG+AGG 0.621127 7.1:+64109074 MS.gene000498:CDS
AATCTGATGTGCTTCCTAGT+GGG 0.627619 7.1:+64109589 MS.gene000498:CDS
TGATGTGTTGCACGTTCATG+GGG 0.633959 7.1:-64108708 None:intergenic
AACCGGAGGATAAAGCCTCA+AGG 0.652895 7.1:-64109541 None:intergenic
GCTTGGAATTTAAACCAGAG+AGG 0.654033 7.1:+64109691 MS.gene000498:CDS
TTATGCTCTAAAGGAACCGG+AGG 0.659244 7.1:-64109555 None:intergenic
AAATCCAAAAGAGAAATGCA+AGG 0.660804 7.1:+64109225 MS.gene000498:CDS
GGAAGGGTCAAGGAAATATG+GGG 0.708106 7.1:+64109660 MS.gene000498:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATGTTATGTAGTTTT+AGG + chr7.1:64109003-64109022 MS.gene000498:CDS 15.0%
!! AGCAAGTTAATTTATTTACA+TGG + chr7.1:64109504-64109523 MS.gene000498:CDS 20.0%
!! TACATAACATATATTGTCAA+AGG - chr7.1:64108998-64109017 None:intergenic 20.0%
!!! AATAGATGATGATTTTTTGA+GGG + chr7.1:64109308-64109327 MS.gene000498:CDS 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG + chr7.1:64108968-64108987 MS.gene000498:CDS 20.0%
! AATATCATTATGAATGAAGC+AGG + chr7.1:64109270-64109289 MS.gene000498:CDS 25.0%
! AGTTCAATAGAAAGACAATT+AGG - chr7.1:64109036-64109055 None:intergenic 25.0%
! ATTGAGAAAAAACTGTTTAG+TGG + chr7.1:64108898-64108917 MS.gene000498:CDS 25.0%
! CAAAGAAAATTTACCATCAA+GGG + chr7.1:64109446-64109465 MS.gene000498:CDS 25.0%
! CTCAAAAAATCATCATCTAT+TGG - chr7.1:64109309-64109328 None:intergenic 25.0%
! TCAAAGAAAATTTACCATCA+AGG + chr7.1:64109445-64109464 MS.gene000498:CDS 25.0%
! TTGATCATGCTTGTAAAAAA+GGG + chr7.1:64108935-64108954 MS.gene000498:CDS 25.0%
!!! ACTAAACAGTTTTTTCTCAA+TGG - chr7.1:64108899-64108918 None:intergenic 25.0%
!!! CAATAGATGATGATTTTTTG+AGG + chr7.1:64109307-64109326 MS.gene000498:CDS 25.0%
!!! TTCTCTTTTGGATTTGATTT+CGG - chr7.1:64109220-64109239 None:intergenic 25.0%
AAAGCAATGAACTTGTAAGA+GGG - chr7.1:64109750-64109769 None:intergenic 30.0%
AAATCCAAAAGAGAAATGCA+AGG + chr7.1:64109225-64109244 MS.gene000498:CDS 30.0%
AAATTCGAAAACTATGGGAA+AGG + chr7.1:64108739-64108758 MS.gene000498:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG + chr7.1:64109806-64109825 MS.gene000498:CDS 30.0%
AATGCAGATTTATGCTCTAA+AGG - chr7.1:64109567-64109586 None:intergenic 30.0%
AGCACAAAATTCGAAAACTA+TGG + chr7.1:64108733-64108752 MS.gene000498:CDS 30.0%
CTTGATCATGCTTGTAAAAA+AGG + chr7.1:64108934-64108953 MS.gene000498:CDS 30.0%
GAACAAAGTTGGAAAGATTT+AGG + chr7.1:64109468-64109487 MS.gene000498:CDS 30.0%
GCACAAAATTCGAAAACTAT+GGG + chr7.1:64108734-64108753 MS.gene000498:CDS 30.0%
GTAAAACAACAGAAAGACTT+GGG - chr7.1:64109890-64109909 None:intergenic 30.0%
GTTGAATTATCACATTCAAG+TGG + chr7.1:64109845-64109864 MS.gene000498:CDS 30.0%
TGTAAAACAACAGAAAGACT+TGG - chr7.1:64109891-64109910 None:intergenic 30.0%
TTTGATCTCTTCAAGAATCT+TGG - chr7.1:64109430-64109449 None:intergenic 30.0%
! ATGTAAAACCAAGATTTTGG+TGG + chr7.1:64109115-64109134 MS.gene000498:CDS 30.0%
! GACATGTAAAACCAAGATTT+TGG + chr7.1:64109112-64109131 MS.gene000498:CDS 30.0%
! TTAGGTCTGATTTTCACATT+TGG + chr7.1:64108806-64108825 MS.gene000498:CDS 30.0%
!! ACTTCATTCAATTTTCAAGC+AGG + chr7.1:64108846-64108865 MS.gene000498:CDS 30.0%
!! GTTGTTTTACACATGAAACA+TGG + chr7.1:64109900-64109919 MS.gene000498:CDS 30.0%
!!! AGTGAGATTTTTGAAATCCT+TGG + chr7.1:64108772-64108791 MS.gene000498:CDS 30.0%
!!! ATTTTTGAAATCCTTGGAGA+TGG + chr7.1:64108778-64108797 MS.gene000498:CDS 30.0%
AACAGAAAGACTTGGGATTA+TGG - chr7.1:64109883-64109902 None:intergenic 35.0%
AAGTTCATTGCTTTCAATGC+TGG + chr7.1:64109756-64109775 MS.gene000498:CDS 35.0%
ACAGAAAGACTTGGGATTAT+GGG - chr7.1:64109882-64109901 None:intergenic 35.0%
ACCTAAAAATTCCATCTCCA+AGG - chr7.1:64108792-64108811 None:intergenic 35.0%
AGAATCTTGGCTTCGATAAA+AGG - chr7.1:64109417-64109436 None:intergenic 35.0%
ATTATGAATGAAGCAGGAGA+TGG + chr7.1:64109276-64109295 MS.gene000498:CDS 35.0%
GAAAGCAATGAACTTGTAAG+AGG - chr7.1:64109751-64109770 None:intergenic 35.0%
GAATCTTGGCTTCGATAAAA+GGG - chr7.1:64109416-64109435 None:intergenic 35.0%
GAATTATCACATTCAAGTGG+TGG + chr7.1:64109848-64109867 MS.gene000498:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG + chr7.1:64109478-64109497 MS.gene000498:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG + chr7.1:64109477-64109496 MS.gene000498:CDS 35.0%
TTGTAAAAAAGGGATGCAAG+TGG + chr7.1:64108945-64108964 MS.gene000498:CDS 35.0%
! TCCTTGGAGATGGAATTTTT+AGG + chr7.1:64108788-64108807 MS.gene000498:CDS 35.0%
! TTCTCCTTGCATTTCTCTTT+TGG - chr7.1:64109232-64109251 None:intergenic 35.0%
! TTTCAAGCAGGAAAGTTTTC+AGG + chr7.1:64108858-64108877 MS.gene000498:CDS 35.0%
!! GATTTATGCTCTAAAGGAAC+CGG - chr7.1:64109561-64109580 None:intergenic 35.0%
AAATCTGATGTGCTTCCTAG+TGG + chr7.1:64109588-64109607 MS.gene000498:CDS 40.0%
AATATGGGGAGAAGATTGCT+TGG + chr7.1:64109674-64109693 MS.gene000498:CDS 40.0%
AATCTGATGTGCTTCCTAGT+GGG + chr7.1:64109589-64109608 MS.gene000498:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG + chr7.1:64109908-64109927 MS.gene000498:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG - chr7.1:64109383-64109402 None:intergenic 40.0%
CTCTCTCACATGCAATTTCA+GGG - chr7.1:64109059-64109078 None:intergenic 40.0%
GCTTGGAATTTAAACCAGAG+AGG + chr7.1:64109691-64109710 MS.gene000498:CDS 40.0%
GTGTATTCTCTATACTCCGT+CGG + chr7.1:64109639-64109658 MS.gene000498:CDS 40.0%
TACCATCAAGGGAACAAAGT+TGG + chr7.1:64109457-64109476 MS.gene000498:CDS 40.0%
TCAATCAATCTACTTGCAGC+TGG + chr7.1:64109336-64109355 MS.gene000498:CDS 40.0%
TGGAATTTAAACCAGAGAGG+TGG + chr7.1:64109694-64109713 MS.gene000498:CDS 40.0%
TTCCAACTTTGTTCCCTTGA+TGG - chr7.1:64109462-64109481 None:intergenic 40.0%
TTCTTAGAAATCCACCTCTC+TGG - chr7.1:64109708-64109727 None:intergenic 40.0%
! AGGTGGATTTCTAAGAAAGG+AGG + chr7.1:64109711-64109730 MS.gene000498:CDS 40.0%
! CTGCAGAAATGGTTTCAAGT+TGG + chr7.1:64109141-64109160 MS.gene000498:CDS 40.0%
! GAGAGGTGGATTTCTAAGAA+AGG + chr7.1:64109708-64109727 MS.gene000498:CDS 40.0%
! GGTGGATTTCTAAGAAAGGA+GGG + chr7.1:64109712-64109731 MS.gene000498:CDS 40.0%
! TGGAAGAGATACGATTAGCT+CGG + chr7.1:64109356-64109375 MS.gene000498:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG + chr7.1:64109380-64109399 MS.gene000498:CDS 40.0%
!!! TACTTGGTTTTTCTGGTTGG+TGG + chr7.1:64109383-64109402 MS.gene000498:CDS 40.0%
ACCAAGGAGTTGTTTGGGTA+AGG + chr7.1:64109779-64109798 MS.gene000498:CDS 45.0%
AGTGATGTGTTGCACGTTCA+TGG - chr7.1:64108713-64108732 None:intergenic 45.0%
ATTCTCTATACTCCGTCGGA+AGG + chr7.1:64109643-64109662 MS.gene000498:CDS 45.0%
CGGAAGGGTCAAGGAAATAT+GGG + chr7.1:64109659-64109678 MS.gene000498:CDS 45.0%
GATTTAACCCTATGCCCACT+AGG - chr7.1:64109606-64109625 None:intergenic 45.0%
GCTCTCTCACATGCAATTTC+AGG - chr7.1:64109060-64109079 None:intergenic 45.0%
GGAAGGGTCAAGGAAATATG+GGG + chr7.1:64109660-64109679 MS.gene000498:CDS 45.0%
GTGATGTGTTGCACGTTCAT+GGG - chr7.1:64108712-64108731 None:intergenic 45.0%
TATTTCCTTGACCCTTCCGA+CGG - chr7.1:64109658-64109677 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG - chr7.1:64109783-64109802 None:intergenic 45.0%
TCGGAAGGGTCAAGGAAATA+TGG + chr7.1:64109658-64109677 MS.gene000498:CDS 45.0%
TGATGTGTTGCACGTTCATG+GGG - chr7.1:64108711-64108730 None:intergenic 45.0%
TGCAGCTTCCACCAAAATCT+TGG - chr7.1:64109126-64109145 None:intergenic 45.0%
TTCTCTATACTCCGTCGGAA+GGG + chr7.1:64109644-64109663 MS.gene000498:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG + chr7.1:64109763-64109782 MS.gene000498:CDS 45.0%
TTTGGTGGAAGCTGCAGAAA+TGG + chr7.1:64109130-64109149 MS.gene000498:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG + chr7.1:64109526-64109545 MS.gene000498:CDS 45.0%
! GGAAGAGATACGATTAGCTC+GGG + chr7.1:64109357-64109376 MS.gene000498:CDS 45.0%
!! GAGAGCATTTACTCAAGCAG+AGG + chr7.1:64109074-64109093 MS.gene000498:CDS 45.0%
!! TTATGCTCTAAAGGAACCGG+AGG - chr7.1:64109558-64109577 None:intergenic 45.0%
AACCGGAGGATAAAGCCTCA+AGG - chr7.1:64109544-64109563 None:intergenic 50.0%
GCTGGACCAAGGAGTTGTTT+GGG + chr7.1:64109774-64109793 MS.gene000498:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG + chr7.1:64109773-64109792 MS.gene000498:CDS 50.0%
! AGCCTTGAGGCTTTATCCTC+CGG + chr7.1:64109539-64109558 MS.gene000498:CDS 50.0%
! ATGTGCTTCCTAGTGGGCAT+AGG + chr7.1:64109595-64109614 MS.gene000498:CDS 50.0%
! TGTGCTTCCTAGTGGGCATA+GGG + chr7.1:64109596-64109615 MS.gene000498:CDS 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG + chr7.1:64109376-64109395 MS.gene000498:CDS 50.0%
ATACTCCGTCGGAAGGGTCA+AGG + chr7.1:64109650-64109669 MS.gene000498:CDS 55.0%
TTGCACGTTCATGGGGTCAC+TGG - chr7.1:64108704-64108723 None:intergenic 55.0%
! CGATTAGCTCGGGCCTTACT+TGG + chr7.1:64109367-64109386 MS.gene000498:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 64108685 64109956 64108685 ID=MS.gene000498
chr7.1 mRNA 64108685 64109956 64108685 ID=MS.gene000498.t1;Parent=MS.gene000498
chr7.1 exon 64108685 64109956 64108685 ID=MS.gene000498.t1.exon1;Parent=MS.gene000498.t1
chr7.1 CDS 64108685 64109956 64108685 ID=cds.MS.gene000498.t1;Parent=MS.gene000498.t1
Gene Sequence

>MS.gene000498

ATGAACATTGTTTGCACCAGTGACCCCATGAACGTGCAACACATCACTAGCACAAAATTCGAAAACTATGGGAAAGGAAACGATTTCAGTGAGATTTTTGAAATCCTTGGAGATGGAATTTTTAGGTCTGATTTTCACATTTGGAAGTACAACAGAACACTACTTCATTCAATTTTCAAGCAGGAAAGTTTTCAGGTATTTATTCACAAAACCATTGAGAAAAAACTGTTTAGTGGTCTTCTTGTATTTCTTGATCATGCTTGTAAAAAAGGGATGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAATATATGTTATGTAGTTTTAGGATTTGATCCTAATTGTCTTTCTATTGAACTCCCTGAAATTGCATGTGAGAGAGCATTTACTCAAGCAGAGGACACATTGTTTTCTAGACATGTAAAACCAAGATTTTGGTGGAAGCTGCAGAAATGGTTTCAAGTTGGTGAAGAGAAACAGTTTATAAAGAATCAGAAAATTATTGATGAAATGCTGTATTCCGAAATCAAATCCAAAAGAGAAATGCAAGGAGAACAAAAAGTTGACTTGCTAAATATCATTATGAATGAAGCAGGAGATGGAGAAAATCCAATAGATGATGATTTTTTGAGGGATACATCAATCAATCTACTTGCAGCTGGAAGAGATACGATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTGGCAACACACCCTTTTATCGAAGCCAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGGGAACAAAGTTGGAAAGATTTAGGAGCAAAAGGGCTTAGCAAGTTAATTTATTTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCTCCGGTTCCTTTAGAGCATAAATCTGCATTAAAATCTGATGTGCTTCCTAGTGGGCATAGGGTTAAATCAAATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTCAAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAGAGGTGGATTTCTAAGAAAGGAGGGATAGTTCATGTTCCCTCTTACAAGTTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTCTTTCTGTTGTTTTACACATGAAACATGGCTTGAAGGTTTATGTCAAAAAAAGAAGCATTTAA

Protein sequence

>MS.gene000498.t1

MNIVCTSDPMNVQHITSTKFENYGKGNDFSEIFEILGDGIFRSDFHIWKYNRTLLHSIFKQESFQVFIHKTIEKKLFSGLLVFLDHACKKGMQVDLQDIFQRLTFDNICYVVLGFDPNCLSIELPEIACERAFTQAEDTLFSRHVKPRFWWKLQKWFQVGEEKQFIKNQKIIDEMLYSEIKSKREMQGEQKVDLLNIIMNEAGDGENPIDDDFLRDTSINLLAAGRDTISSGLTWFFWLVATHPFIEAKILEEIKENLPSREQSWKDLGAKGLSKLIYLHGALCEALRLYPPVPLEHKSALKSDVLPSGHRVKSNTMIVYSLYSVGRVKEIWGEDCLEFKPERWISKKGGIVHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSLSVVLHMKHGLKVYVKKRSI