Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026300.t1 | RHN78233.1 | 55.4 | 785 | 69 | 2 | 1 | 785 | 18 | 521 | 5.60E-228 | 800.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026300.t1 | Q9FVS9 | 25.0 | 787 | 277 | 7 | 10 | 783 | 10 | 496 | 1.4e-73 | 279.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026300.t1 | A0A072VGU4 | 55.4 | 785 | 69 | 2 | 1 | 785 | 1 | 504 | 4.0e-228 | 800.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026300.t1 | MTR_1g035670 | 85.714 | 357 | 51 | 0 | 1 | 357 | 1 | 357 | 0.0 | 648 |
MS.gene026300.t1 | MTR_1g035670 | 88.811 | 143 | 16 | 0 | 643 | 785 | 362 | 504 | 2.46e-86 | 283 |
MS.gene026300.t1 | MTR_1g036130 | 83.657 | 361 | 55 | 2 | 1 | 357 | 1 | 361 | 0.0 | 617 |
MS.gene026300.t1 | MTR_1g036130 | 92.308 | 143 | 11 | 0 | 643 | 785 | 366 | 508 | 2.73e-89 | 291 |
MS.gene026300.t1 | MTR_1g035860 | 82.759 | 348 | 60 | 0 | 10 | 357 | 16 | 363 | 0.0 | 603 |
MS.gene026300.t1 | MTR_1g035860 | 90.361 | 83 | 8 | 0 | 643 | 725 | 368 | 450 | 8.28e-46 | 171 |
MS.gene026300.t1 | MTR_1g035760 | 78.151 | 357 | 55 | 1 | 1 | 357 | 1 | 334 | 0.0 | 569 |
MS.gene026300.t1 | MTR_1g035760 | 91.608 | 143 | 12 | 0 | 643 | 785 | 339 | 481 | 3.55e-88 | 287 |
MS.gene026300.t1 | MTR_1g036010 | 66.942 | 363 | 113 | 4 | 1 | 357 | 1 | 362 | 9.65e-173 | 507 |
MS.gene026300.t1 | MTR_1g036010 | 79.021 | 143 | 30 | 0 | 643 | 785 | 367 | 509 | 3.04e-77 | 258 |
MS.gene026300.t1 | MTR_1g035830 | 64.917 | 362 | 122 | 3 | 1 | 357 | 1 | 362 | 5.54e-165 | 487 |
MS.gene026300.t1 | MTR_1g035830 | 81.119 | 143 | 27 | 0 | 643 | 785 | 367 | 509 | 1.14e-77 | 259 |
MS.gene026300.t1 | MTR_1g035940 | 64.463 | 363 | 122 | 4 | 1 | 357 | 1 | 362 | 1.27e-161 | 478 |
MS.gene026300.t1 | MTR_1g035940 | 81.119 | 143 | 27 | 0 | 643 | 785 | 367 | 509 | 1.78e-78 | 262 |
MS.gene026300.t1 | MTR_1g035750 | 57.487 | 374 | 153 | 4 | 1 | 369 | 1 | 373 | 5.08e-146 | 438 |
MS.gene026300.t1 | MTR_1g035750 | 73.427 | 143 | 38 | 0 | 643 | 785 | 365 | 507 | 1.77e-68 | 235 |
MS.gene026300.t1 | MTR_1g069715 | 73.571 | 280 | 68 | 3 | 84 | 357 | 1 | 280 | 9.66e-136 | 417 |
MS.gene026300.t1 | MTR_1g069715 | 80.645 | 124 | 24 | 0 | 643 | 766 | 285 | 408 | 1.45e-65 | 231 |
MS.gene026300.t1 | MTR_1g036200 | 54.930 | 355 | 145 | 6 | 10 | 357 | 8 | 354 | 1.69e-124 | 382 |
MS.gene026300.t1 | MTR_1g036200 | 74.126 | 143 | 37 | 0 | 643 | 785 | 359 | 501 | 3.37e-71 | 242 |
MS.gene026300.t1 | MTR_1g036270 | 51.969 | 381 | 170 | 7 | 1 | 369 | 1 | 380 | 3.29e-124 | 382 |
MS.gene026300.t1 | MTR_1g036270 | 69.930 | 143 | 42 | 1 | 643 | 785 | 372 | 513 | 5.55e-65 | 226 |
MS.gene026300.t1 | MTR_1g050362 | 53.371 | 356 | 157 | 5 | 10 | 357 | 8 | 362 | 3.80e-124 | 382 |
MS.gene026300.t1 | MTR_1g050362 | 72.535 | 142 | 38 | 1 | 643 | 784 | 367 | 507 | 3.09e-68 | 234 |
MS.gene026300.t1 | MTR_1g035790 | 51.475 | 373 | 174 | 7 | 1 | 369 | 1 | 370 | 1.06e-123 | 380 |
MS.gene026300.t1 | MTR_1g035790 | 74.825 | 143 | 36 | 0 | 643 | 785 | 362 | 504 | 1.20e-71 | 243 |
MS.gene026300.t1 | MTR_1g035580 | 53.757 | 346 | 151 | 5 | 1 | 339 | 1 | 344 | 4.22e-120 | 371 |
MS.gene026300.t1 | MTR_1g035580 | 78.322 | 143 | 31 | 0 | 643 | 785 | 356 | 498 | 1.55e-76 | 256 |
MS.gene026300.t1 | MTR_1g035800 | 51.359 | 368 | 167 | 6 | 1 | 357 | 1 | 367 | 2.48e-113 | 354 |
MS.gene026300.t1 | MTR_1g035800 | 73.050 | 141 | 38 | 0 | 643 | 783 | 372 | 512 | 4.28e-69 | 237 |
MS.gene026300.t1 | MTR_8g088470 | 43.452 | 336 | 182 | 3 | 11 | 346 | 7 | 334 | 6.85e-99 | 315 |
MS.gene026300.t1 | MTR_8g088470 | 70.922 | 141 | 41 | 0 | 643 | 783 | 351 | 491 | 2.32e-66 | 229 |
MS.gene026300.t1 | MTR_5g029550 | 98.000 | 150 | 3 | 0 | 358 | 507 | 72 | 221 | 1.08e-95 | 298 |
MS.gene026300.t1 | MTR_7g033580 | 44.379 | 338 | 176 | 5 | 10 | 345 | 10 | 337 | 3.07e-95 | 306 |
MS.gene026300.t1 | MTR_7g033580 | 72.028 | 143 | 40 | 0 | 643 | 785 | 354 | 496 | 1.34e-68 | 235 |
MS.gene026300.t1 | MTR_5g029550 | 98.000 | 150 | 3 | 0 | 358 | 507 | 72 | 221 | 3.29e-95 | 298 |
MS.gene026300.t1 | MTR_5g029550 | 98.000 | 150 | 3 | 0 | 358 | 507 | 72 | 221 | 1.46e-93 | 297 |
MS.gene026300.t1 | MTR_6g004630 | 41.240 | 371 | 210 | 5 | 2 | 369 | 6 | 371 | 2.75e-92 | 298 |
MS.gene026300.t1 | MTR_6g004630 | 61.538 | 143 | 55 | 0 | 643 | 785 | 363 | 505 | 2.42e-55 | 199 |
MS.gene026300.t1 | MTR_7g033570 | 42.560 | 336 | 185 | 4 | 10 | 345 | 10 | 337 | 3.72e-92 | 298 |
MS.gene026300.t1 | MTR_7g033570 | 69.930 | 143 | 43 | 0 | 643 | 785 | 354 | 496 | 9.66e-67 | 230 |
MS.gene026300.t1 | MTR_6g004670 | 40.517 | 348 | 198 | 4 | 2 | 346 | 8 | 349 | 1.35e-87 | 286 |
MS.gene026300.t1 | MTR_6g004670 | 63.121 | 141 | 52 | 0 | 643 | 783 | 365 | 505 | 6.03e-57 | 203 |
MS.gene026300.t1 | MTR_6g004590 | 38.120 | 383 | 220 | 4 | 1 | 369 | 4 | 383 | 8.89e-85 | 279 |
MS.gene026300.t1 | MTR_6g004590 | 61.538 | 143 | 55 | 0 | 643 | 785 | 375 | 517 | 1.33e-56 | 202 |
MS.gene026300.t1 | MTR_6g004610 | 42.810 | 306 | 169 | 3 | 39 | 341 | 1 | 303 | 9.03e-85 | 278 |
MS.gene026300.t1 | MTR_6g004610 | 61.429 | 140 | 54 | 0 | 643 | 782 | 323 | 462 | 6.50e-55 | 197 |
MS.gene026300.t1 | MTR_6g004600 | 38.005 | 371 | 212 | 5 | 1 | 357 | 4 | 370 | 2.42e-81 | 270 |
MS.gene026300.t1 | MTR_6g004600 | 65.035 | 143 | 50 | 0 | 643 | 785 | 375 | 517 | 6.98e-60 | 211 |
MS.gene026300.t1 | MTR_6g084040 | 63.043 | 184 | 48 | 3 | 1 | 183 | 1 | 165 | 1.24e-70 | 229 |
MS.gene026300.t1 | MTR_4g012320 | 64.336 | 143 | 51 | 0 | 643 | 785 | 83 | 225 | 1.98e-64 | 214 |
MS.gene026300.t1 | MTR_4g012320 | 43.678 | 87 | 48 | 1 | 284 | 369 | 5 | 91 | 3.70e-15 | 75.9 |
MS.gene026300.t1 | MTR_1g050590 | 85.321 | 109 | 16 | 0 | 249 | 357 | 2 | 110 | 4.65e-57 | 191 |
MS.gene026300.t1 | MTR_4g075110 | 33.978 | 362 | 218 | 9 | 10 | 357 | 51 | 405 | 1.18e-56 | 204 |
MS.gene026300.t1 | MTR_4g075110 | 48.936 | 141 | 71 | 1 | 643 | 783 | 410 | 549 | 1.44e-43 | 166 |
MS.gene026300.t1 | MTR_1g037560 | 33.524 | 349 | 204 | 11 | 23 | 361 | 57 | 387 | 9.65e-55 | 198 |
MS.gene026300.t1 | MTR_1g037560 | 52.113 | 142 | 68 | 0 | 643 | 784 | 403 | 544 | 1.34e-46 | 175 |
MS.gene026300.t1 | MTR_7g406990 | 33.876 | 307 | 195 | 6 | 33 | 335 | 49 | 351 | 4.83e-54 | 193 |
MS.gene026300.t1 | MTR_1g040110 | 72.072 | 111 | 31 | 0 | 126 | 236 | 57 | 167 | 4.83e-53 | 181 |
MS.gene026300.t1 | MTR_1g037550 | 33.333 | 309 | 197 | 5 | 33 | 335 | 66 | 371 | 1.58e-49 | 184 |
MS.gene026300.t1 | MTR_1g037550 | 51.408 | 142 | 69 | 0 | 643 | 784 | 407 | 548 | 7.15e-48 | 179 |
MS.gene026300.t1 | MTR_1g036140 | 82.105 | 95 | 17 | 0 | 252 | 346 | 69 | 163 | 4.67e-45 | 159 |
MS.gene026300.t1 | MTR_1g036140 | 73.529 | 68 | 18 | 0 | 1 | 68 | 1 | 68 | 1.46e-28 | 112 |
MS.gene026300.t1 | MTR_8g030590 | 31.847 | 314 | 198 | 6 | 31 | 335 | 30 | 336 | 1.04e-39 | 155 |
MS.gene026300.t1 | MTR_8g030590 | 50.704 | 142 | 69 | 1 | 643 | 783 | 369 | 510 | 3.68e-38 | 150 |
MS.gene026300.t1 | MTR_5g070010 | 48.951 | 143 | 71 | 1 | 643 | 783 | 366 | 508 | 1.16e-38 | 151 |
MS.gene026300.t1 | MTR_5g070010 | 29.299 | 314 | 202 | 6 | 31 | 335 | 31 | 333 | 1.99e-35 | 141 |
MS.gene026300.t1 | MTR_3g463060 | 30.892 | 314 | 197 | 6 | 31 | 335 | 36 | 338 | 1.94e-38 | 150 |
MS.gene026300.t1 | MTR_3g463060 | 50.000 | 142 | 67 | 2 | 646 | 783 | 361 | 502 | 3.02e-37 | 147 |
MS.gene026300.t1 | MTR_8g098435 | 50.355 | 141 | 69 | 1 | 643 | 783 | 366 | 505 | 3.12e-38 | 150 |
MS.gene026300.t1 | MTR_8g098435 | 31.190 | 311 | 201 | 5 | 31 | 335 | 30 | 333 | 7.19e-38 | 149 |
MS.gene026300.t1 | MTR_7g096340 | 30.303 | 297 | 191 | 5 | 75 | 369 | 82 | 364 | 1.48e-36 | 145 |
MS.gene026300.t1 | MTR_7g096340 | 42.953 | 149 | 77 | 6 | 643 | 784 | 356 | 503 | 2.49e-27 | 117 |
MS.gene026300.t1 | MTR_8g035820 | 30.606 | 330 | 216 | 8 | 10 | 337 | 19 | 337 | 3.03e-36 | 144 |
MS.gene026300.t1 | MTR_8g035820 | 44.444 | 144 | 74 | 3 | 643 | 783 | 369 | 509 | 3.72e-30 | 125 |
MS.gene026300.t1 | MTR_8g035860 | 30.145 | 345 | 227 | 9 | 10 | 352 | 19 | 351 | 5.35e-36 | 143 |
MS.gene026300.t1 | MTR_8g035860 | 42.958 | 142 | 79 | 2 | 643 | 783 | 369 | 509 | 3.51e-29 | 122 |
MS.gene026300.t1 | MTR_1g070345 | 30.233 | 344 | 222 | 8 | 29 | 369 | 38 | 366 | 7.11e-36 | 143 |
MS.gene026300.t1 | MTR_1g070345 | 39.735 | 151 | 81 | 3 | 641 | 783 | 356 | 504 | 1.71e-29 | 124 |
MS.gene026300.t1 | MTR_3g080580 | 29.653 | 317 | 195 | 7 | 31 | 337 | 40 | 338 | 8.25e-36 | 143 |
MS.gene026300.t1 | MTR_3g080580 | 45.395 | 152 | 70 | 5 | 643 | 783 | 368 | 517 | 1.97e-30 | 127 |
MS.gene026300.t1 | MTR_8g035810 | 29.305 | 331 | 220 | 9 | 10 | 337 | 19 | 338 | 1.29e-35 | 140 |
MS.gene026300.t1 | MTR_1g070365 | 32.099 | 324 | 204 | 8 | 29 | 347 | 38 | 350 | 2.45e-35 | 141 |
MS.gene026300.t1 | MTR_1g070365 | 39.286 | 168 | 95 | 3 | 622 | 783 | 338 | 504 | 3.04e-30 | 126 |
MS.gene026300.t1 | MTR_8g035810 | 29.607 | 331 | 219 | 9 | 10 | 337 | 19 | 338 | 3.63e-35 | 140 |
MS.gene026300.t1 | MTR_8g035810 | 42.857 | 84 | 47 | 1 | 643 | 726 | 370 | 452 | 8.80e-15 | 78.2 |
MS.gene026300.t1 | MTR_7g088330 | 28.701 | 331 | 213 | 9 | 2 | 324 | 10 | 325 | 4.14e-35 | 140 |
MS.gene026300.t1 | MTR_7g088330 | 43.836 | 146 | 77 | 2 | 643 | 783 | 363 | 508 | 5.33e-32 | 131 |
MS.gene026300.t1 | MTR_8g035810 | 29.607 | 331 | 219 | 9 | 10 | 337 | 19 | 338 | 6.19e-35 | 140 |
MS.gene026300.t1 | MTR_8g035810 | 43.662 | 142 | 78 | 2 | 643 | 783 | 370 | 510 | 6.10e-30 | 125 |
MS.gene026300.t1 | MTR_7g029275 | 28.097 | 331 | 221 | 9 | 13 | 334 | 20 | 342 | 3.86e-33 | 135 |
MS.gene026300.t1 | MTR_7g029275 | 45.517 | 145 | 74 | 3 | 643 | 783 | 365 | 508 | 1.15e-31 | 130 |
MS.gene026300.t1 | MTR_7g096320 | 29.630 | 297 | 193 | 5 | 75 | 369 | 83 | 365 | 2.60e-32 | 132 |
MS.gene026300.t1 | MTR_7g096320 | 43.046 | 151 | 78 | 6 | 641 | 784 | 355 | 504 | 9.17e-28 | 118 |
MS.gene026300.t1 | MTR_2g086040 | 31.973 | 294 | 162 | 8 | 53 | 335 | 68 | 334 | 3.36e-32 | 132 |
MS.gene026300.t1 | MTR_2g086040 | 39.583 | 144 | 83 | 3 | 642 | 783 | 357 | 498 | 1.61e-25 | 111 |
MS.gene026300.t1 | MTR_5g019140 | 27.105 | 380 | 255 | 11 | 7 | 375 | 16 | 384 | 3.02e-31 | 129 |
MS.gene026300.t1 | MTR_5g019140 | 42.958 | 142 | 80 | 1 | 643 | 784 | 391 | 531 | 2.36e-29 | 123 |
MS.gene026300.t1 | MTR_4g119660 | 26.562 | 384 | 255 | 12 | 1 | 375 | 4 | 369 | 4.11e-31 | 129 |
MS.gene026300.t1 | MTR_4g119660 | 42.553 | 141 | 80 | 1 | 643 | 783 | 376 | 515 | 2.92e-29 | 123 |
MS.gene026300.t1 | MTR_8g035760 | 26.774 | 310 | 212 | 8 | 35 | 342 | 49 | 345 | 1.24e-30 | 127 |
MS.gene026300.t1 | MTR_8g035760 | 42.958 | 142 | 80 | 1 | 643 | 783 | 370 | 511 | 1.73e-28 | 120 |
MS.gene026300.t1 | MTR_1g102220 | 28.235 | 340 | 215 | 12 | 35 | 366 | 43 | 361 | 4.14e-30 | 125 |
MS.gene026300.t1 | MTR_1g102220 | 39.437 | 142 | 85 | 1 | 643 | 783 | 365 | 506 | 8.55e-27 | 115 |
MS.gene026300.t1 | MTR_8g035780 | 44.828 | 145 | 74 | 3 | 643 | 784 | 370 | 511 | 5.45e-30 | 125 |
MS.gene026300.t1 | MTR_8g035780 | 28.425 | 292 | 196 | 7 | 78 | 367 | 82 | 362 | 8.92e-29 | 121 |
MS.gene026300.t1 | MTR_4g054920 | 42.466 | 146 | 76 | 4 | 642 | 783 | 375 | 516 | 8.46e-30 | 125 |
MS.gene026300.t1 | MTR_4g054920 | 29.032 | 279 | 158 | 6 | 79 | 335 | 92 | 352 | 1.37e-29 | 124 |
MS.gene026300.t1 | MTR_1g035660 | 58.036 | 112 | 31 | 4 | 162 | 273 | 22 | 117 | 1.31e-29 | 115 |
MS.gene026300.t1 | MTR_8g035680 | 26.518 | 313 | 210 | 9 | 35 | 342 | 49 | 346 | 1.68e-29 | 124 |
MS.gene026300.t1 | MTR_8g035680 | 43.750 | 144 | 76 | 3 | 643 | 783 | 371 | 512 | 1.67e-28 | 120 |
MS.gene026300.t1 | MTR_8g035680 | 43.750 | 144 | 76 | 3 | 643 | 783 | 224 | 365 | 2.17e-29 | 120 |
MS.gene026300.t1 | MTR_8g035680 | 25.854 | 205 | 138 | 5 | 142 | 342 | 5 | 199 | 8.52e-15 | 77.4 |
MS.gene026300.t1 | MTR_1g060550 | 29.010 | 293 | 192 | 6 | 78 | 366 | 93 | 373 | 3.69e-29 | 122 |
MS.gene026300.t1 | MTR_1g060550 | 43.103 | 116 | 61 | 2 | 643 | 756 | 369 | 481 | 5.59e-26 | 113 |
MS.gene026300.t1 | MTR_1g102210 | 39.161 | 143 | 86 | 1 | 642 | 783 | 219 | 361 | 1.05e-27 | 115 |
MS.gene026300.t1 | MTR_8g035790 | 46.465 | 99 | 51 | 2 | 687 | 784 | 1 | 98 | 6.75e-22 | 91.7 |
MS.gene026300.t1 | MTR_8g046580 | 47.368 | 95 | 45 | 2 | 666 | 758 | 201 | 292 | 7.46e-21 | 94.4 |
MS.gene026300.t1 | MTR_8g046580 | 28.804 | 184 | 121 | 5 | 31 | 213 | 12 | 186 | 5.88e-12 | 67.8 |
MS.gene026300.t1 | MTR_1g070370 | 34.759 | 187 | 103 | 5 | 169 | 352 | 5 | 175 | 1.65e-20 | 92.0 |
MS.gene026300.t1 | MTR_2g061750 | 31.313 | 198 | 100 | 7 | 70 | 245 | 9 | 192 | 1.66e-18 | 85.1 |
MS.gene026300.t1 | MTR_2g062670 | 30.481 | 187 | 101 | 4 | 168 | 345 | 67 | 233 | 4.11e-18 | 88.6 |
MS.gene026300.t1 | MTR_2g061740 | 31.053 | 190 | 97 | 6 | 78 | 245 | 15 | 192 | 6.69e-18 | 83.6 |
MS.gene026300.t1 | MTR_7g079440 | 25.606 | 289 | 181 | 10 | 61 | 335 | 218 | 486 | 1.64e-16 | 83.6 |
MS.gene026300.t1 | MTR_7g079440 | 25.606 | 289 | 181 | 10 | 61 | 335 | 218 | 486 | 3.38e-16 | 83.2 |
MS.gene026300.t1 | MTR_7g079440 | 25.606 | 289 | 181 | 10 | 61 | 335 | 218 | 486 | 3.46e-16 | 83.2 |
MS.gene026300.t1 | MTR_6g072490 | 34.815 | 135 | 84 | 3 | 647 | 780 | 379 | 510 | 1.72e-14 | 77.4 |
MS.gene026300.t1 | MTR_1g101040 | 32.121 | 165 | 101 | 4 | 617 | 780 | 358 | 512 | 2.14e-14 | 77.0 |
MS.gene026300.t1 | MTR_1g101050 | 34.074 | 135 | 85 | 3 | 647 | 780 | 377 | 508 | 3.54e-14 | 76.3 |
MS.gene026300.t1 | MTR_6g084090 | 72.500 | 40 | 11 | 0 | 282 | 321 | 11 | 50 | 1.16e-13 | 66.2 |
MS.gene026300.t1 | MTR_2g072270 | 30.769 | 169 | 96 | 4 | 624 | 778 | 357 | 518 | 4.50e-13 | 72.8 |
MS.gene026300.t1 | MTR_8g098565 | 31.250 | 144 | 94 | 3 | 644 | 783 | 364 | 506 | 1.73e-12 | 70.9 |
MS.gene026300.t1 | MTR_6g084060 | 72.973 | 37 | 10 | 0 | 57 | 93 | 17 | 53 | 2.87e-12 | 62.4 |
MS.gene026300.t1 | MTR_8g104030 | 36.134 | 119 | 66 | 3 | 638 | 752 | 132 | 244 | 3.02e-12 | 68.6 |
MS.gene026300.t1 | MTR_7g098550 | 29.851 | 134 | 88 | 3 | 645 | 778 | 365 | 492 | 3.40e-12 | 70.1 |
MS.gene026300.t1 | MTR_7g098550 | 29.851 | 134 | 88 | 3 | 645 | 778 | 373 | 500 | 3.62e-12 | 70.1 |
MS.gene026300.t1 | MTR_2g010320 | 32.051 | 156 | 95 | 4 | 631 | 783 | 356 | 503 | 5.01e-12 | 69.7 |
MS.gene026300.t1 | MTR_0025s0110 | 29.851 | 134 | 92 | 2 | 647 | 780 | 392 | 523 | 6.49e-12 | 69.3 |
MS.gene026300.t1 | MTR_8g012585 | 31.667 | 120 | 79 | 2 | 645 | 762 | 308 | 426 | 6.97e-12 | 68.9 |
MS.gene026300.t1 | MTR_4g113650 | 29.851 | 134 | 92 | 2 | 645 | 778 | 383 | 514 | 8.95e-12 | 68.9 |
MS.gene026300.t1 | MTR_6g017325 | 28.676 | 136 | 89 | 4 | 644 | 778 | 374 | 502 | 9.24e-12 | 68.6 |
MS.gene026300.t1 | MTR_7g006900 | 28.676 | 136 | 89 | 4 | 644 | 778 | 339 | 467 | 1.08e-11 | 68.6 |
MS.gene026300.t1 | MTR_6g004570 | 32.381 | 105 | 58 | 2 | 242 | 333 | 1 | 105 | 1.92e-11 | 65.5 |
MS.gene026300.t1 | MTR_5g070840 | 32.143 | 112 | 75 | 1 | 642 | 753 | 30 | 140 | 2.06e-11 | 63.9 |
MS.gene026300.t1 | MTR_0147s0030 | 28.058 | 139 | 98 | 2 | 644 | 782 | 394 | 530 | 2.43e-11 | 67.4 |
MS.gene026300.t1 | MTR_2g010280 | 32.051 | 156 | 95 | 4 | 631 | 783 | 356 | 503 | 2.64e-11 | 67.4 |
MS.gene026300.t1 | MTR_5g070920 | 31.707 | 123 | 81 | 2 | 642 | 764 | 358 | 477 | 2.97e-11 | 67.0 |
MS.gene026300.t1 | MTR_3g093530 | 28.058 | 139 | 96 | 3 | 645 | 782 | 388 | 523 | 3.03e-11 | 67.0 |
MS.gene026300.t1 | MTR_2g010380 | 32.867 | 143 | 92 | 3 | 644 | 783 | 368 | 509 | 4.02e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026300.t1 | AT4G32170 | 37.853 | 354 | 207 | 4 | 11 | 357 | 11 | 358 | 1.52e-71 | 243 |
MS.gene026300.t1 | AT4G32170 | 57.042 | 142 | 61 | 0 | 643 | 784 | 363 | 504 | 2.64e-53 | 193 |
MS.gene026300.t1 | AT4G39500 | 36.872 | 358 | 208 | 5 | 11 | 357 | 21 | 371 | 2.74e-70 | 240 |
MS.gene026300.t1 | AT4G39500 | 57.042 | 142 | 61 | 0 | 643 | 784 | 376 | 517 | 1.59e-53 | 194 |
MS.gene026300.t1 | AT4G39500 | 37.500 | 328 | 189 | 4 | 39 | 357 | 1 | 321 | 2.51e-65 | 225 |
MS.gene026300.t1 | AT4G39500 | 57.042 | 142 | 61 | 0 | 643 | 784 | 326 | 467 | 4.06e-54 | 194 |
MS.gene026300.t1 | AT1G57750 | 32.432 | 370 | 230 | 6 | 1 | 363 | 1 | 357 | 4.97e-62 | 215 |
MS.gene026300.t1 | AT1G57750 | 50.000 | 70 | 35 | 0 | 643 | 712 | 356 | 425 | 4.59e-20 | 94.4 |
MS.gene026300.t1 | AT4G39490 | 35.821 | 335 | 200 | 5 | 11 | 335 | 11 | 340 | 9.84e-62 | 217 |
MS.gene026300.t1 | AT4G39490 | 59.441 | 143 | 58 | 0 | 643 | 785 | 376 | 518 | 9.81e-59 | 208 |
MS.gene026300.t1 | AT1G57750 | 32.418 | 364 | 226 | 5 | 10 | 366 | 10 | 360 | 1.15e-61 | 216 |
MS.gene026300.t1 | AT1G57750 | 54.225 | 142 | 65 | 0 | 643 | 784 | 356 | 497 | 6.55e-50 | 183 |
MS.gene026300.t1 | AT2G23180 | 33.596 | 381 | 220 | 7 | 1 | 365 | 1 | 364 | 9.99e-61 | 214 |
MS.gene026300.t1 | AT2G23180 | 61.702 | 141 | 54 | 0 | 643 | 783 | 372 | 512 | 1.16e-57 | 206 |
MS.gene026300.t1 | AT4G39510 | 33.884 | 363 | 224 | 5 | 13 | 366 | 14 | 369 | 2.59e-59 | 210 |
MS.gene026300.t1 | AT4G39510 | 52.113 | 142 | 68 | 0 | 643 | 784 | 365 | 506 | 6.72e-46 | 172 |
MS.gene026300.t1 | AT4G39480 | 60.839 | 143 | 56 | 0 | 643 | 785 | 373 | 515 | 3.38e-59 | 210 |
MS.gene026300.t1 | AT4G39480 | 33.333 | 351 | 224 | 4 | 9 | 353 | 12 | 358 | 8.08e-52 | 189 |
MS.gene026300.t1 | AT2G21910 | 34.177 | 316 | 197 | 3 | 31 | 338 | 32 | 344 | 6.81e-59 | 209 |
MS.gene026300.t1 | AT2G21910 | 59.028 | 144 | 58 | 1 | 643 | 785 | 365 | 508 | 2.54e-53 | 193 |
MS.gene026300.t1 | AT1G47620 | 32.773 | 357 | 220 | 5 | 9 | 349 | 12 | 364 | 2.47e-57 | 204 |
MS.gene026300.t1 | AT1G47620 | 56.338 | 142 | 62 | 0 | 643 | 784 | 375 | 516 | 3.45e-51 | 187 |
MS.gene026300.t1 | AT2G35500 | 62.987 | 154 | 57 | 0 | 354 | 507 | 78 | 231 | 8.29e-57 | 199 |
MS.gene026300.t1 | AT5G08250 | 34.347 | 329 | 205 | 6 | 10 | 335 | 43 | 363 | 2.21e-56 | 202 |
MS.gene026300.t1 | AT5G08250 | 46.207 | 145 | 75 | 2 | 643 | 785 | 399 | 542 | 2.76e-40 | 157 |
MS.gene026300.t1 | AT5G52320 | 32.853 | 347 | 213 | 6 | 32 | 369 | 35 | 370 | 1.20e-55 | 199 |
MS.gene026300.t1 | AT5G52320 | 54.610 | 141 | 64 | 0 | 642 | 782 | 361 | 501 | 6.15e-47 | 175 |
MS.gene026300.t1 | AT5G52320 | 32.853 | 347 | 213 | 6 | 32 | 369 | 35 | 370 | 1.44e-55 | 199 |
MS.gene026300.t1 | AT5G52320 | 53.676 | 136 | 63 | 0 | 642 | 777 | 361 | 496 | 9.86e-45 | 169 |
MS.gene026300.t1 | AT5G08250 | 35.197 | 304 | 187 | 5 | 35 | 335 | 5 | 301 | 1.41e-53 | 193 |
MS.gene026300.t1 | AT5G08250 | 46.207 | 145 | 75 | 2 | 643 | 785 | 337 | 480 | 1.55e-40 | 156 |
MS.gene026300.t1 | AT5G23190 | 32.628 | 331 | 212 | 7 | 10 | 335 | 42 | 366 | 1.05e-51 | 190 |
MS.gene026300.t1 | AT5G23190 | 48.252 | 143 | 73 | 1 | 643 | 785 | 401 | 542 | 2.70e-41 | 160 |
MS.gene026300.t1 | AT1G65340 | 30.868 | 311 | 204 | 3 | 33 | 335 | 36 | 343 | 1.73e-50 | 185 |
MS.gene026300.t1 | AT1G65340 | 55.714 | 140 | 62 | 0 | 643 | 782 | 363 | 502 | 9.40e-50 | 183 |
MS.gene026300.t1 | AT1G24540 | 33.033 | 333 | 208 | 6 | 31 | 351 | 43 | 372 | 2.35e-49 | 182 |
MS.gene026300.t1 | AT1G24540 | 48.227 | 141 | 72 | 1 | 643 | 783 | 381 | 520 | 1.95e-39 | 154 |
MS.gene026300.t1 | AT5G02900 | 32.113 | 355 | 196 | 8 | 1 | 344 | 1 | 321 | 2.58e-48 | 178 |
MS.gene026300.t1 | AT5G02900 | 54.545 | 143 | 64 | 1 | 643 | 784 | 338 | 480 | 5.53e-46 | 172 |
MS.gene026300.t1 | AT3G26125 | 29.412 | 323 | 218 | 4 | 31 | 346 | 46 | 365 | 7.21e-46 | 172 |
MS.gene026300.t1 | AT3G26125 | 48.252 | 143 | 73 | 1 | 643 | 785 | 393 | 534 | 1.37e-41 | 160 |
MS.gene026300.t1 | AT1G63710 | 31.250 | 336 | 210 | 7 | 11 | 335 | 10 | 335 | 7.77e-46 | 172 |
MS.gene026300.t1 | AT1G63710 | 48.227 | 141 | 72 | 1 | 643 | 783 | 368 | 507 | 1.48e-36 | 145 |
MS.gene026300.t1 | AT4G00360 | 31.343 | 335 | 215 | 7 | 10 | 335 | 9 | 337 | 7.90e-45 | 170 |
MS.gene026300.t1 | AT4G00360 | 48.592 | 142 | 72 | 1 | 643 | 783 | 370 | 511 | 1.42e-37 | 149 |
MS.gene026300.t1 | AT1G01600 | 29.762 | 336 | 220 | 7 | 10 | 335 | 9 | 338 | 1.04e-42 | 164 |
MS.gene026300.t1 | AT1G01600 | 50.000 | 142 | 70 | 1 | 643 | 783 | 372 | 513 | 1.14e-36 | 146 |
MS.gene026300.t1 | AT3G56630 | 32.680 | 306 | 189 | 8 | 35 | 335 | 35 | 328 | 1.08e-40 | 157 |
MS.gene026300.t1 | AT3G56630 | 43.056 | 144 | 78 | 3 | 643 | 783 | 356 | 498 | 6.00e-31 | 128 |
MS.gene026300.t1 | AT2G45970 | 29.712 | 313 | 205 | 7 | 31 | 335 | 30 | 335 | 9.88e-40 | 155 |
MS.gene026300.t1 | AT2G45970 | 49.650 | 143 | 70 | 1 | 643 | 783 | 368 | 510 | 2.75e-38 | 150 |
MS.gene026300.t1 | AT1G13140 | 44.056 | 143 | 79 | 1 | 643 | 785 | 359 | 500 | 1.18e-39 | 154 |
MS.gene026300.t1 | AT1G13140 | 27.606 | 355 | 225 | 7 | 5 | 354 | 18 | 345 | 1.74e-34 | 139 |
MS.gene026300.t1 | AT1G13140 | 28.375 | 363 | 238 | 7 | 5 | 354 | 18 | 371 | 1.65e-39 | 154 |
MS.gene026300.t1 | AT1G13140 | 44.056 | 143 | 79 | 1 | 643 | 785 | 385 | 526 | 1.79e-39 | 154 |
MS.gene026300.t1 | AT1G13150 | 46.154 | 143 | 76 | 1 | 643 | 785 | 378 | 519 | 1.72e-39 | 154 |
MS.gene026300.t1 | AT1G13150 | 28.485 | 330 | 226 | 5 | 31 | 354 | 39 | 364 | 1.47e-35 | 142 |
MS.gene026300.t1 | AT1G34540 | 31.046 | 306 | 194 | 8 | 35 | 335 | 35 | 328 | 9.58e-39 | 151 |
MS.gene026300.t1 | AT1G34540 | 43.357 | 143 | 78 | 2 | 643 | 783 | 356 | 497 | 3.62e-29 | 122 |
MS.gene026300.t1 | AT5G58860 | 47.552 | 143 | 73 | 1 | 643 | 783 | 366 | 508 | 9.97e-38 | 148 |
MS.gene026300.t1 | AT5G58860 | 27.515 | 338 | 227 | 5 | 5 | 335 | 7 | 333 | 4.56e-34 | 137 |
MS.gene026300.t1 | AT2G44890 | 30.086 | 349 | 226 | 9 | 1 | 345 | 7 | 341 | 3.22e-37 | 146 |
MS.gene026300.t1 | AT2G44890 | 41.549 | 142 | 67 | 2 | 643 | 783 | 364 | 490 | 4.37e-26 | 113 |
MS.gene026300.t1 | AT2G44890 | 30.286 | 350 | 228 | 9 | 1 | 345 | 7 | 345 | 9.32e-37 | 145 |
MS.gene026300.t1 | AT2G44890 | 45.070 | 142 | 76 | 2 | 643 | 783 | 368 | 508 | 5.18e-30 | 125 |
MS.gene026300.t1 | AT2G45510 | 30.383 | 339 | 214 | 10 | 3 | 337 | 17 | 337 | 1.06e-36 | 145 |
MS.gene026300.t1 | AT2G45510 | 46.479 | 142 | 74 | 2 | 643 | 783 | 368 | 508 | 3.68e-31 | 129 |
MS.gene026300.t1 | AT2G27690 | 32.950 | 261 | 161 | 7 | 78 | 335 | 76 | 325 | 7.89e-35 | 139 |
MS.gene026300.t1 | AT2G27690 | 36.232 | 138 | 83 | 1 | 643 | 780 | 351 | 483 | 1.76e-23 | 105 |
MS.gene026300.t1 | AT3G48520 | 26.409 | 337 | 231 | 7 | 5 | 335 | 8 | 333 | 2.40e-34 | 138 |
MS.gene026300.t1 | AT3G48520 | 38.043 | 184 | 97 | 5 | 606 | 783 | 327 | 499 | 9.45e-29 | 121 |
MS.gene026300.t1 | AT5G63450 | 26.331 | 338 | 238 | 6 | 3 | 338 | 10 | 338 | 2.19e-32 | 132 |
MS.gene026300.t1 | AT5G63450 | 40.132 | 152 | 83 | 3 | 639 | 783 | 352 | 502 | 6.06e-28 | 119 |
MS.gene026300.t1 | AT5G63450 | 26.409 | 337 | 237 | 6 | 3 | 337 | 68 | 395 | 4.51e-32 | 132 |
MS.gene026300.t1 | AT5G63450 | 40.132 | 152 | 83 | 3 | 639 | 783 | 410 | 560 | 9.42e-28 | 119 |
MS.gene026300.t1 | AT1G69500 | 42.553 | 141 | 80 | 1 | 643 | 783 | 384 | 523 | 3.27e-30 | 126 |
MS.gene026300.t1 | AT1G69500 | 26.154 | 390 | 258 | 11 | 1 | 374 | 1 | 376 | 4.06e-27 | 117 |
MS.gene026300.t1 | AT3G01900 | 28.793 | 323 | 204 | 12 | 18 | 336 | 22 | 322 | 5.76e-29 | 122 |
MS.gene026300.t1 | AT3G01900 | 40.000 | 150 | 77 | 3 | 643 | 783 | 345 | 490 | 3.06e-28 | 120 |
MS.gene026300.t1 | AT1G66030 | 30.178 | 169 | 102 | 2 | 1 | 160 | 1 | 162 | 3.39e-20 | 89.0 |
MS.gene026300.t1 | AT5G51900 | 32.584 | 178 | 104 | 4 | 218 | 380 | 1 | 177 | 7.06e-20 | 90.1 |
MS.gene026300.t1 | AT5G51900 | 44.444 | 63 | 35 | 0 | 722 | 784 | 178 | 240 | 1.07e-11 | 66.2 |
MS.gene026300.t1 | AT1G31800 | 24.390 | 287 | 187 | 11 | 61 | 335 | 139 | 407 | 8.10e-15 | 79.0 |
MS.gene026300.t1 | AT3G53130 | 29.861 | 144 | 91 | 3 | 645 | 783 | 401 | 539 | 9.13e-14 | 75.1 |
MS.gene026300.t1 | AT2G26710 | 31.818 | 132 | 88 | 2 | 647 | 778 | 381 | 510 | 1.63e-13 | 74.3 |
MS.gene026300.t1 | AT1G64950 | 30.556 | 144 | 97 | 2 | 642 | 783 | 365 | 507 | 3.51e-13 | 73.2 |
MS.gene026300.t1 | AT5G24900 | 29.496 | 139 | 94 | 3 | 644 | 781 | 273 | 408 | 4.99e-13 | 72.4 |
MS.gene026300.t1 | AT5G24900 | 29.496 | 139 | 94 | 3 | 644 | 781 | 390 | 525 | 9.51e-13 | 72.0 |
MS.gene026300.t1 | AT3G25180 | 33.898 | 118 | 76 | 2 | 645 | 762 | 368 | 483 | 1.47e-12 | 71.2 |
MS.gene026300.t1 | AT1G64940 | 29.371 | 143 | 98 | 2 | 643 | 783 | 367 | 508 | 5.72e-12 | 69.3 |
MS.gene026300.t1 | AT5G38450 | 28.676 | 136 | 90 | 3 | 644 | 778 | 382 | 511 | 1.74e-11 | 67.8 |
MS.gene026300.t1 | AT1G64900 | 31.973 | 147 | 94 | 4 | 643 | 784 | 360 | 505 | 1.94e-11 | 67.8 |
MS.gene026300.t1 | AT5G24910 | 27.660 | 141 | 98 | 3 | 644 | 783 | 395 | 532 | 4.77e-11 | 66.6 |
MS.gene026300.t1 | AT1G67110 | 27.273 | 143 | 97 | 3 | 637 | 778 | 369 | 505 | 5.08e-11 | 66.6 |
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGATTTCTTGAATAATTT+TGG | 0.132514 | 1.1:+20309634 | None:intergenic |
CAAGCTCTTCAGCCACTTTC+TGG | 0.138144 | 1.1:+20308190 | None:intergenic |
CACATTGCGAGCAAGAATTT+TGG | 0.149919 | 1.1:-20310358 | MS.gene026300:CDS |
TCCATGATGTTTCATGATTA+AGG | 0.172761 | 1.1:+20310456 | None:intergenic |
CCGATTATTGGCAAATTAAT+TGG | 0.175834 | 1.1:+20310529 | None:intergenic |
CTTAATGATGCATCTGAAAT+AGG | 0.226789 | 1.1:-20310148 | MS.gene026300:CDS |
TGGGAAGGATGGAACAAATA+TGG | 0.242158 | 1.1:-20303521 | MS.gene026300:CDS |
GAGTATAGTAACCTTGTATT+TGG | 0.246150 | 1.1:+20303555 | None:intergenic |
AATGAAAGCTTTGGGGTTAC+AGG | 0.259080 | 1.1:+20303300 | None:intergenic |
TCTTTACCCAAACAACTTCT+AGG | 0.261821 | 1.1:+20303399 | None:intergenic |
GCACTTGCTTTGCTCTTGTT+TGG | 0.288326 | 1.1:+20309841 | None:intergenic |
AATTTGTTTGGAAGGCAATT+AGG | 0.290322 | 1.1:+20310049 | None:intergenic |
CTTAGCTCATTAAATTTGTT+TGG | 0.306127 | 1.1:+20310037 | None:intergenic |
GCCACTCCAACTGCCGCAAC+AGG | 0.310646 | 1.1:+20303822 | None:intergenic |
AGCATCTGCACTATTGCATT+TGG | 0.313215 | 1.1:-20310079 | MS.gene026300:CDS |
TCTACATCTAAAAGTCCTTT+AGG | 0.314553 | 1.1:-20304429 | MS.gene026300:CDS |
TACAGGTCCTAGAAGTTGTT+TGG | 0.326435 | 1.1:-20303406 | MS.gene026300:CDS |
GAAGAACAAATGAAAGCTTT+GGG | 0.331800 | 1.1:+20303292 | None:intergenic |
CAACTGAGACCTGTACTAAC+TGG | 0.339063 | 1.1:+20309695 | None:intergenic |
CCAATTAATTTGCCAATAAT+CGG | 0.339218 | 1.1:-20310529 | MS.gene026300:CDS |
TGAAGAGCTTGCTACTGGTC+TGG | 0.344091 | 1.1:-20308178 | MS.gene026300:CDS |
TTCAAGAAATCAAAGATAAC+TGG | 0.346850 | 1.1:-20309625 | MS.gene026300:CDS |
GAAGAGCTTGCTACTGGTCT+GGG | 0.347927 | 1.1:-20308177 | MS.gene026300:CDS |
GACGGCAGCATACCGATTAT+TGG | 0.352679 | 1.1:+20310517 | None:intergenic |
TGCAATTTGGTTTCGCCGCC+GGG | 0.354385 | 1.1:-20307514 | MS.gene026300:CDS |
GCAGTTGGAGTGGCTGTTCT+AGG | 0.356252 | 1.1:-20303813 | MS.gene026300:CDS |
ACTTTATTCCAAGTTATCTA+TGG | 0.356888 | 1.1:-20309958 | MS.gene026300:CDS |
TTAAACCCTCAGAAACAATA+TGG | 0.379539 | 1.1:-20308461 | MS.gene026300:intron |
TGAAGAACAAATGAAAGCTT+TGG | 0.381413 | 1.1:+20303291 | None:intergenic |
GGGAAGGATGGAACAAATAT+GGG | 0.382754 | 1.1:-20303520 | MS.gene026300:CDS |
CGTTTCGATTTGAAGGAGTC+TGG | 0.390222 | 1.1:-20310429 | MS.gene026300:CDS |
AAGTTTATAGCTTTCAATAC+AGG | 0.400273 | 1.1:-20303423 | MS.gene026300:CDS |
GCAGCCCCTGTTGCGGCAGT+TGG | 0.405300 | 1.1:-20303828 | MS.gene026300:CDS |
CTCTCTGACACCCATCTCTC+AGG | 0.406156 | 1.1:+20303474 | None:intergenic |
TGCAGCTTCCATAGATAACT+TGG | 0.407442 | 1.1:+20309950 | None:intergenic |
TGTTTCATTCATTTCTGAAA+AGG | 0.413955 | 1.1:-20310237 | MS.gene026300:CDS |
TGATTAAGGTTACATAATCA+TGG | 0.420434 | 1.1:+20310470 | None:intergenic |
GGAGGAACGTTTCGATTTGA+AGG | 0.423047 | 1.1:-20310436 | MS.gene026300:CDS |
GTGCAATTTGGTTTCGCCGC+CGG | 0.423777 | 1.1:-20307515 | MS.gene026300:CDS |
ACTATACTCTTTGTACGCTA+TGG | 0.425973 | 1.1:-20303541 | MS.gene026300:CDS |
AATAGGTGCACAGGTGGAAC+TGG | 0.435032 | 1.1:-20310131 | MS.gene026300:CDS |
TCAGATGCATCATTAAGAAA+TGG | 0.437927 | 1.1:+20310154 | None:intergenic |
ATTGCACAAATATGCTCAAA+AGG | 0.439771 | 1.1:+20303615 | None:intergenic |
AAAACGATCCTGAGTTGAAA+TGG | 0.440141 | 1.1:-20308311 | MS.gene026300:CDS |
ACAGGTCCTAGAAGTTGTTT+GGG | 0.441450 | 1.1:-20303405 | MS.gene026300:CDS |
GCAATGTGATCAACATTCAT+TGG | 0.445448 | 1.1:+20310373 | None:intergenic |
TGACTTGAGCTGCTCGGATA+AGG | 0.446778 | 1.1:+20304462 | None:intergenic |
TGAAGGAAGAATCTGGAAAC+GGG | 0.448257 | 1.1:-20309778 | MS.gene026300:CDS |
ATCAAAAGTGAACCTATTCA+AGG | 0.448673 | 1.1:+20310102 | None:intergenic |
TTGGTCAAGAAAAGAAGTTA+AGG | 0.449220 | 1.1:-20309913 | MS.gene026300:CDS |
ATGTCAATAATTCTGTGTAT+TGG | 0.452105 | 1.1:-20310619 | MS.gene026300:CDS |
ACTTACATGAATCCACAGTT+TGG | 0.453144 | 1.1:+20307947 | None:intergenic |
GGCCTGACATCATGGAATCA+TGG | 0.458410 | 1.1:-20308290 | MS.gene026300:CDS |
GGAACATCAATCTATCTTGT+TGG | 0.459106 | 1.1:-20308231 | MS.gene026300:CDS |
GCTCATTAAATTTGTTTGGA+AGG | 0.459807 | 1.1:+20310041 | None:intergenic |
TGTTTATCATGAACATAAAG+AGG | 0.460380 | 1.1:-20305534 | MS.gene026300:CDS |
TGGTCAAGAAAAGAAGTTAA+GGG | 0.461979 | 1.1:-20309912 | MS.gene026300:CDS |
CATCATTAAGAAATGGTACT+AGG | 0.470381 | 1.1:+20310161 | None:intergenic |
ATTATTGTCTATCAACGTAA+TGG | 0.470764 | 1.1:+20308500 | None:intergenic |
TCATGGGAATCACTTGCTGC+TGG | 0.474008 | 1.1:-20308273 | MS.gene026300:CDS |
TCCCATGATTCCATGATGTC+AGG | 0.474648 | 1.1:+20308288 | None:intergenic |
ACTATCAGAGTGTTGCAGTC+AGG | 0.477120 | 1.1:-20308528 | MS.gene026300:CDS |
TTATTGTCTATCAACGTAAT+GGG | 0.479137 | 1.1:+20308501 | None:intergenic |
CACAAACCATATTGTTTCTG+AGG | 0.481608 | 1.1:+20308455 | None:intergenic |
TTGGAGTGGCTGTTCTAGGA+AGG | 0.483019 | 1.1:-20303809 | MS.gene026300:CDS |
TTATACTTTCATACAAGAAA+CGG | 0.484289 | 1.1:+20309870 | None:intergenic |
TAGTTTCATTCAAATGAAGA+TGG | 0.484730 | 1.1:-20303373 | MS.gene026300:CDS |
GCACTGATGAAGGAAGAATC+TGG | 0.489656 | 1.1:-20309785 | MS.gene026300:CDS |
TCAATAATTCTGTGTATTGG+AGG | 0.495031 | 1.1:-20310616 | MS.gene026300:CDS |
CTATACTCTTTGTACGCTAT+GGG | 0.495917 | 1.1:-20303540 | MS.gene026300:CDS |
CACTTTCTGGTTAATTTCAG+TGG | 0.503075 | 1.1:+20308203 | None:intergenic |
CAGAACATTTAAAATGCCTA+AGG | 0.504118 | 1.1:-20304529 | MS.gene026300:CDS |
TCTTCACATGAAACATGGCT+TGG | 0.505150 | 1.1:-20303274 | MS.gene026300:CDS |
CTCTGTTGTTTCCATACGTG+AGG | 0.506437 | 1.1:+20310265 | None:intergenic |
AAGAAGCACAAAAGACATAT+CGG | 0.507065 | 1.1:-20308574 | MS.gene026300:CDS |
AACTGTCGCAGCCCCTGTTG+CGG | 0.507446 | 1.1:-20303835 | MS.gene026300:CDS |
TCACATGAAACATGGCTTGG+AGG | 0.508618 | 1.1:-20303271 | MS.gene026300:CDS |
TCTTCCTATACATCTACTAC+TGG | 0.509021 | 1.1:-20310576 | MS.gene026300:CDS |
GCCTGACATCATGGAATCAT+GGG | 0.510245 | 1.1:-20308289 | MS.gene026300:CDS |
AAGCGCTCCTTTGCGACGGT+TGG | 0.512113 | 1.1:-20303859 | MS.gene026300:CDS |
TTACCTTGAGAGAGTGAAGT+AGG | 0.514275 | 1.1:+20307467 | None:intergenic |
GTGGCTGAAGAGCTTGCTAC+TGG | 0.517891 | 1.1:-20308183 | MS.gene026300:CDS |
CAGTTAGTACAGGTCTCAGT+TGG | 0.519187 | 1.1:-20309694 | MS.gene026300:CDS |
GGAATTTAAGCCTGAGAGAT+GGG | 0.521678 | 1.1:-20303484 | MS.gene026300:CDS |
ACAAATATGCTCAAAAGGTA+CGG | 0.523581 | 1.1:+20303620 | None:intergenic |
ACCTTAATCATGAAACATCA+TGG | 0.525286 | 1.1:-20310457 | MS.gene026300:CDS |
GATGTATAGGAAGATTAGAA+TGG | 0.526213 | 1.1:+20310585 | None:intergenic |
CTTTGTAAAAGCACTGATGA+AGG | 0.527955 | 1.1:-20309795 | MS.gene026300:CDS |
GAATGTGACATGCCTCCTAA+AGG | 0.528180 | 1.1:+20304414 | None:intergenic |
AACTGGAGGATGCCTTGAAT+AGG | 0.528331 | 1.1:-20310114 | MS.gene026300:CDS |
TTCTGATAATGCGTCAGAGA+TGG | 0.530858 | 1.1:-20308628 | MS.gene026300:CDS |
CCCTGTTGCGGCAGTTGGAG+TGG | 0.531320 | 1.1:-20303823 | MS.gene026300:CDS |
GTCTCCAGTAGTAGATGTAT+AGG | 0.531378 | 1.1:+20310572 | None:intergenic |
ATGAAGGAAGAATCTGGAAA+CGG | 0.531991 | 1.1:-20309779 | MS.gene026300:CDS |
CACTGAAATTAACCAGAAAG+TGG | 0.535768 | 1.1:-20308202 | MS.gene026300:CDS |
ATGAAAGCTTTGGGGTTACA+GGG | 0.536301 | 1.1:+20303301 | None:intergenic |
TAATGTCTAATCCTCACGTA+TGG | 0.536899 | 1.1:-20310276 | MS.gene026300:CDS |
CCACTCCAACTGCCGCAACA+GGG | 0.537052 | 1.1:+20303823 | None:intergenic |
ACATGAATCCACAGTTTGGT+TGG | 0.537166 | 1.1:+20307951 | None:intergenic |
ATGGAGTTAAGATTAAACAT+AGG | 0.539913 | 1.1:-20308609 | MS.gene026300:CDS |
AAAGCTATAAACTTGTAAGA+TGG | 0.543137 | 1.1:+20303432 | None:intergenic |
AAGATTAAACATAGGAAGCA+TGG | 0.553172 | 1.1:-20308601 | MS.gene026300:CDS |
CACTCCAACTGCCGCAACAG+GGG | 0.553634 | 1.1:+20303824 | None:intergenic |
CAAATATGCTCAAAAGGTAC+GGG | 0.555446 | 1.1:+20303621 | None:intergenic |
GTTGAAATGGCCTGACATCA+TGG | 0.556044 | 1.1:-20308298 | MS.gene026300:CDS |
GTGTGAACCACGGTGAAACC+CGG | 0.557279 | 1.1:+20307496 | None:intergenic |
AACTGAGACCTGTACTAACT+GGG | 0.561483 | 1.1:+20309696 | None:intergenic |
GGAAATGGCCCAGTTAGTAC+AGG | 0.569566 | 1.1:-20309704 | MS.gene026300:CDS |
ACAAACCATATTGTTTCTGA+GGG | 0.573961 | 1.1:+20308456 | None:intergenic |
GTTCCTACTTCACTCTCTCA+AGG | 0.575136 | 1.1:-20307470 | MS.gene026300:intron |
ATGTCAGGCCATTTCAACTC+AGG | 0.577136 | 1.1:+20308303 | None:intergenic |
GAGAGATGGGTGTCAGAGAG+AGG | 0.578711 | 1.1:-20303471 | MS.gene026300:CDS |
TCAGATTCTTTCGAGAGATG+AGG | 0.580339 | 1.1:-20309585 | MS.gene026300:CDS |
CTGACGTGACTTGAGCTGCT+CGG | 0.580345 | 1.1:+20304456 | None:intergenic |
TTTCACATAAAGGTGGTGGA+AGG | 0.581931 | 1.1:-20303327 | MS.gene026300:CDS |
TTTGTACGCTATGGGAAGGA+TGG | 0.588075 | 1.1:-20303532 | MS.gene026300:CDS |
ATTATCACCTCATCTATCAC+AGG | 0.592479 | 1.1:+20309989 | None:intergenic |
TGGAATTTAAGCCTGAGAGA+TGG | 0.594173 | 1.1:-20303485 | MS.gene026300:CDS |
TGCATCTGAAATAGGTGCAC+AGG | 0.595779 | 1.1:-20310140 | MS.gene026300:CDS |
ACAGTTGCCAACCGTCGCAA+AGG | 0.596090 | 1.1:+20303852 | None:intergenic |
TGTCACATTCAGATGGCACT+AGG | 0.596244 | 1.1:-20304401 | MS.gene026300:intron |
GGAGGCATGTCACATTCAGA+TGG | 0.596372 | 1.1:-20304408 | MS.gene026300:CDS |
TGGAGTGGCTGTTCTAGGAA+GGG | 0.596997 | 1.1:-20303808 | MS.gene026300:intron |
AACAAGTGACGCAAAAGCGA+CGG | 0.598886 | 1.1:+20310499 | None:intergenic |
GATAACTTGGAATAAAGTGC+CGG | 0.600130 | 1.1:+20309963 | None:intergenic |
ATTAAAGCGCTCCTTTGCGA+CGG | 0.602730 | 1.1:-20303863 | MS.gene026300:intron |
TAGATGAGGTGATAATCTAC+CGG | 0.607529 | 1.1:-20309982 | MS.gene026300:CDS |
AAGAGCTTGCTACTGGTCTG+GGG | 0.608924 | 1.1:-20308176 | MS.gene026300:intron |
TTTGTTCTTCACATGAAACA+TGG | 0.609716 | 1.1:-20303279 | MS.gene026300:CDS |
GAGCTATATGTGAAGCCTTG+AGG | 0.611209 | 1.1:-20303653 | MS.gene026300:CDS |
GGACTAACACGGTCTCCACT+AGG | 0.613439 | 1.1:+20303576 | None:intergenic |
ACATCTAAAAGTCCTTTAGG+AGG | 0.613987 | 1.1:-20304426 | MS.gene026300:CDS |
AGGTGCACAGGTGGAACTGG+AGG | 0.614285 | 1.1:-20310128 | MS.gene026300:CDS |
ATCTCTTCCTGTGATAGATG+AGG | 0.616044 | 1.1:-20309996 | MS.gene026300:CDS |
ATCTGAAATAGGTGCACAGG+TGG | 0.624881 | 1.1:-20310137 | MS.gene026300:CDS |
AACTTATTCCAACCAAACTG+TGG | 0.626590 | 1.1:-20307959 | MS.gene026300:CDS |
TGCCTAAGGAGAGAAAAGAT+AGG | 0.631941 | 1.1:-20304515 | MS.gene026300:CDS |
GGAAGGATGGAACAAATATG+GGG | 0.639334 | 1.1:-20303519 | MS.gene026300:CDS |
ATATGCTCAAAAGGTACGGG+AGG | 0.640854 | 1.1:+20303624 | None:intergenic |
AAGAACAAATGAAAGCTTTG+GGG | 0.648358 | 1.1:+20303293 | None:intergenic |
ACTCTTTGTACGCTATGGGA+AGG | 0.648813 | 1.1:-20303536 | MS.gene026300:CDS |
ACCGTGTTAGTCCAAATACA+AGG | 0.650116 | 1.1:-20303566 | MS.gene026300:CDS |
AGATAACTGGAAAACACAAG+AGG | 0.654196 | 1.1:-20309612 | MS.gene026300:CDS |
AAATCCGATGTACTACCTAG+TGG | 0.661400 | 1.1:-20303591 | MS.gene026300:CDS |
TATAGATGATGATCATCTTG+TGG | 0.662960 | 1.1:-20308346 | MS.gene026300:CDS |
AATATGGGGAGAAAACTGCA+TGG | 0.665351 | 1.1:-20303505 | MS.gene026300:CDS |
TTCGCCGCCGGGTTTCACCG+TGG | 0.672267 | 1.1:-20307503 | MS.gene026300:CDS |
GAAGGAAGAATCTGGAAACG+GGG | 0.673288 | 1.1:-20309777 | MS.gene026300:CDS |
AAGGAAGAATCTGGAAACGG+GGG | 0.679628 | 1.1:-20309776 | MS.gene026300:CDS |
TACGGGAGGATAGAGCCTCA+AGG | 0.689497 | 1.1:+20303638 | None:intergenic |
GTCTCCACTAGGTAGTACAT+CGG | 0.690311 | 1.1:+20303587 | None:intergenic |
ACCTTGTATTTGGACTAACA+CGG | 0.706680 | 1.1:+20303565 | None:intergenic |
CTCACGTATGGAAACAACAG+AGG | 0.745968 | 1.1:-20310264 | MS.gene026300:CDS |
TAGGAACGAAGTGTGAACCA+CGG | 0.754340 | 1.1:+20307486 | None:intergenic |
TGAACCACGGTGAAACCCGG+CGG | 0.764801 | 1.1:+20307499 | None:intergenic |
TTAATCATGAAACATCATGG+AGG | 0.773135 | 1.1:-20310454 | MS.gene026300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 20303245 | 20310641 | 20303245 | ID=MS.gene026300 |
chr1.1 | mRNA | 20303245 | 20310641 | 20303245 | ID=MS.gene026300.t1;Parent=MS.gene026300 |
chr1.1 | exon | 20309571 | 20310641 | 20309571 | ID=MS.gene026300.t1.exon1;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20309571 | 20310641 | 20309571 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20308462 | 20308652 | 20308462 | ID=MS.gene026300.t1.exon2;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20308462 | 20308652 | 20308462 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20308177 | 20308371 | 20308177 | ID=MS.gene026300.t1.exon3;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20308177 | 20308371 | 20308177 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20307953 | 20308014 | 20307953 | ID=MS.gene026300.t1.exon4;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20307953 | 20308014 | 20307953 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20307471 | 20307541 | 20307471 | ID=MS.gene026300.t1.exon5;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20307471 | 20307541 | 20307471 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20305516 | 20305557 | 20305516 | ID=MS.gene026300.t1.exon6;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20305516 | 20305557 | 20305516 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20304402 | 20304574 | 20304402 | ID=MS.gene026300.t1.exon7;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20304402 | 20304574 | 20304402 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20303809 | 20303878 | 20303809 | ID=MS.gene026300.t1.exon8;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20303809 | 20303878 | 20303809 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
chr1.1 | exon | 20303245 | 20303727 | 20303245 | ID=MS.gene026300.t1.exon9;Parent=MS.gene026300.t1 |
chr1.1 | CDS | 20303245 | 20303727 | 20303245 | ID=cds.MS.gene026300.t1;Parent=MS.gene026300.t1 |
Gene Sequence |
Protein sequence |