AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32947


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32947.t1 MTR_1g035750 95.266 507 24 0 1 507 1 507 0.0 1016
MS.gene32947.t1 MTR_1g036130 63.601 511 179 4 1 507 1 508 0.0 684
MS.gene32947.t1 MTR_1g035670 65.157 508 172 3 1 507 1 504 0.0 683
MS.gene32947.t1 MTR_1g035760 62.992 508 160 4 1 507 1 481 0.0 655
MS.gene32947.t1 MTR_1g035790 61.961 510 185 5 1 507 1 504 0.0 654
MS.gene32947.t1 MTR_1g050362 62.672 509 183 6 3 506 1 507 0.0 653
MS.gene32947.t1 MTR_1g036200 62.948 502 174 6 10 507 8 501 0.0 650
MS.gene32947.t1 MTR_1g035580 61.448 511 180 6 1 507 1 498 0.0 639
MS.gene32947.t1 MTR_1g035830 60.196 510 199 4 1 507 1 509 0.0 637
MS.gene32947.t1 MTR_1g036010 59.412 510 203 4 1 507 1 509 0.0 636
MS.gene32947.t1 MTR_1g035940 59.412 510 203 4 1 507 1 509 0.0 629
MS.gene32947.t1 MTR_1g036270 60.194 515 195 9 1 507 1 513 0.0 623
MS.gene32947.t1 MTR_1g035800 60.624 513 193 6 1 505 1 512 0.0 615
MS.gene32947.t1 MTR_1g035860 62.415 439 160 3 10 447 16 450 0.0 569
MS.gene32947.t1 MTR_1g069715 63.235 408 146 4 83 487 1 407 0.0 545
MS.gene32947.t1 MTR_7g033580 52.849 509 225 3 1 507 1 496 0.0 533
MS.gene32947.t1 MTR_7g033570 50.888 507 238 4 1 507 1 496 0.0 529
MS.gene32947.t1 MTR_8g088470 52.410 498 221 4 11 505 7 491 0.0 526
MS.gene32947.t1 MTR_6g004600 49.020 510 244 6 9 507 13 517 1.44e-174 501
MS.gene32947.t1 MTR_6g004630 49.409 508 240 6 9 507 6 505 3.70e-172 495
MS.gene32947.t1 MTR_6g004590 48.728 511 243 6 11 507 12 517 8.50e-172 494
MS.gene32947.t1 MTR_6g004670 49.012 506 245 6 4 505 9 505 2.65e-168 485
MS.gene32947.t1 MTR_6g004610 50.214 468 226 4 38 504 1 462 3.14e-160 463
MS.gene32947.t1 MTR_1g037560 39.919 496 284 5 20 506 54 544 1.10e-128 386
MS.gene32947.t1 MTR_4g075110 38.160 511 301 7 4 505 45 549 4.68e-124 374
MS.gene32947.t1 MTR_1g037550 38.645 502 286 7 20 506 54 548 2.89e-122 369
MS.gene32947.t1 MTR_8g098435 38.163 490 269 10 33 505 33 505 4.50e-100 311
MS.gene32947.t1 MTR_8g030590 35.048 525 300 13 1 505 7 510 7.80e-98 306
MS.gene32947.t1 MTR_3g463060 37.628 489 262 12 34 505 40 502 1.52e-95 299
MS.gene32947.t1 MTR_5g070010 35.108 507 298 9 15 505 17 508 1.50e-93 294
MS.gene32947.t1 MTR_4g012320 60.274 219 87 0 289 507 7 225 2.74e-93 283
MS.gene32947.t1 MTR_7g088330 34.843 508 298 11 13 505 19 508 1.12e-88 281
MS.gene32947.t1 MTR_1g070345 33.528 513 299 14 13 506 16 505 5.75e-83 266
MS.gene32947.t1 MTR_7g096340 32.724 492 296 13 27 506 35 503 6.94e-83 266
MS.gene32947.t1 MTR_7g029275 33.333 507 306 13 13 505 20 508 3.25e-82 264
MS.gene32947.t1 MTR_3g080580 34.686 493 288 15 31 505 41 517 4.27e-80 259
MS.gene32947.t1 MTR_1g070365 33.537 492 294 13 25 505 35 504 3.11e-79 256
MS.gene32947.t1 MTR_7g096320 34.009 444 260 12 74 506 83 504 1.08e-77 252
MS.gene32947.t1 MTR_4g119660 30.829 519 321 10 13 506 11 516 5.04e-75 246
MS.gene32947.t1 MTR_5g019140 30.636 519 322 10 13 506 26 531 2.07e-74 244
MS.gene32947.t1 MTR_8g035810 32.558 516 310 18 7 505 16 510 3.18e-74 243
MS.gene32947.t1 MTR_4g054920 34.389 442 257 12 79 505 93 516 7.40e-74 243
MS.gene32947.t1 MTR_1g060550 33.560 441 262 12 76 505 92 512 1.02e-71 237
MS.gene32947.t1 MTR_8g035860 31.579 513 318 16 7 505 16 509 3.28e-71 236
MS.gene32947.t1 MTR_2g086040 34.107 431 258 12 79 505 90 498 1.01e-70 234
MS.gene32947.t1 MTR_8g035820 32.992 488 291 15 34 505 42 509 1.30e-70 234
MS.gene32947.t1 MTR_8g035780 33.265 487 293 14 34 506 43 511 8.60e-70 232
MS.gene32947.t1 MTR_7g406990 36.212 359 212 7 30 380 47 396 2.07e-68 226
MS.gene32947.t1 MTR_1g102220 29.792 480 313 10 34 505 43 506 6.09e-68 227
MS.gene32947.t1 MTR_8g035760 30.063 479 312 12 34 505 49 511 1.31e-65 221
MS.gene32947.t1 MTR_8g035680 29.278 485 309 14 34 505 49 512 1.98e-63 215
MS.gene32947.t1 MTR_6g084040 54.595 185 65 2 1 184 1 167 1.69e-61 199
MS.gene32947.t1 MTR_8g035810 31.659 458 276 17 7 448 16 452 8.73e-60 204
MS.gene32947.t1 MTR_8g035680 31.579 361 219 10 157 505 21 365 2.98e-51 179
MS.gene32947.t1 MTR_1g102210 27.826 345 209 8 167 505 51 361 2.64e-40 149
MS.gene32947.t1 MTR_8g035810 29.563 389 238 16 7 379 16 384 1.48e-39 148
MS.gene32947.t1 MTR_1g070370 32.558 258 152 6 168 423 5 242 1.15e-36 136
MS.gene32947.t1 MTR_1g040110 56.250 112 48 1 125 236 57 167 3.95e-36 132
MS.gene32947.t1 MTR_1g050590 57.143 119 48 1 250 368 3 118 7.26e-36 129
MS.gene32947.t1 MTR_7g079440 26.882 465 298 16 52 505 215 648 1.29e-32 132
MS.gene32947.t1 MTR_5g009110 24.038 520 324 18 36 506 74 571 2.01e-27 116
MS.gene32947.t1 MTR_1g062190 23.799 437 306 12 77 505 122 539 2.75e-27 115
MS.gene32947.t1 MTR_1g036140 55.670 97 40 1 252 348 69 162 4.82e-25 102
MS.gene32947.t1 MTR_1g036140 42.636 129 61 4 1 116 1 129 9.21e-24 98.2
MS.gene32947.t1 MTR_3g093530 24.089 494 325 16 32 504 59 523 2.04e-24 107
MS.gene32947.t1 MTR_6g017325 24.304 395 267 9 109 500 137 502 4.29e-24 105
MS.gene32947.t1 MTR_7g006900 24.561 399 261 13 109 500 102 467 5.00e-24 105
MS.gene32947.t1 MTR_7g079440 27.202 386 241 14 52 428 215 569 1.04e-23 105
MS.gene32947.t1 MTR_5g009110 24.208 442 272 15 109 506 1 423 4.27e-22 99.0
MS.gene32947.t1 MTR_8g035790 48.485 99 49 2 409 506 1 98 1.60e-21 89.7
MS.gene32947.t1 MTR_8g098565 27.473 273 189 5 239 505 237 506 4.46e-21 96.7
MS.gene32947.t1 MTR_1g085680 24.670 454 278 13 70 500 99 511 7.43e-21 95.9
MS.gene32947.t1 MTR_4g113650 23.799 458 299 12 58 500 92 514 2.10e-20 94.7
MS.gene32947.t1 MTR_2g010250 28.309 272 187 6 239 505 237 505 3.43e-20 94.0
MS.gene32947.t1 MTR_8g046580 40.351 114 67 1 380 493 193 305 6.40e-20 90.9
MS.gene32947.t1 MTR_4g071710 24.538 379 245 12 121 481 129 484 9.97e-20 92.4
MS.gene32947.t1 MTR_2g010380 24.434 442 309 13 76 505 81 509 3.46e-19 90.9
MS.gene32947.t1 MTR_0181s0030 23.529 476 330 16 10 474 14 466 3.73e-19 90.9
MS.gene32947.t1 MTR_0171s0020 26.331 338 221 13 146 474 154 472 5.49e-19 90.1
MS.gene32947.t1 MTR_1g101050 22.434 419 292 12 88 502 119 508 7.35e-19 89.7
MS.gene32947.t1 MTR_0025s0110 21.739 460 308 16 58 502 101 523 1.03e-18 89.4
MS.gene32947.t1 MTR_6g008500 21.942 515 325 19 9 476 17 501 1.10e-18 89.4
MS.gene32947.t1 MTR_6g072490 26.515 264 184 7 241 502 255 510 1.28e-18 89.0
MS.gene32947.t1 MTR_1g015860 23.260 546 344 21 2 506 18 529 1.30e-18 89.4
MS.gene32947.t1 MTR_5g009110 24.603 378 245 12 36 393 74 431 1.32e-18 89.0
MS.gene32947.t1 MTR_1g101040 26.894 264 183 6 241 502 257 512 1.61e-18 89.0
MS.gene32947.t1 MTR_0147s0030 25.954 262 172 6 258 504 276 530 1.64e-18 89.0
MS.gene32947.t1 MTR_1g022040 21.810 431 310 9 70 500 95 498 1.74e-18 88.6
MS.gene32947.t1 MTR_2g010280 29.412 221 149 5 290 505 285 503 2.74e-18 88.2
MS.gene32947.t1 MTR_8g008530 26.996 263 160 7 258 504 272 518 2.86e-18 88.2
MS.gene32947.t1 MTR_2g010320 26.644 289 201 7 222 505 221 503 3.25e-18 87.8
MS.gene32947.t1 MTR_2g010290 29.412 221 149 5 290 505 314 532 3.42e-18 87.8
MS.gene32947.t1 MTR_6g008530 26.693 251 161 6 237 476 257 495 3.54e-18 87.8
MS.gene32947.t1 MTR_8g042000 24.017 458 270 19 70 497 107 516 3.54e-18 87.8
MS.gene32947.t1 MTR_3g104560 23.048 538 339 18 14 506 30 537 4.42e-18 87.4
MS.gene32947.t1 MTR_2g072270 21.111 450 292 15 70 497 107 515 8.18e-18 86.7
MS.gene32947.t1 MTR_2g062670 31.000 200 104 6 148 338 49 223 8.75e-18 86.3
MS.gene32947.t1 MTR_8g012590 26.198 313 217 10 200 505 193 498 1.04e-17 86.3
MS.gene32947.t1 MTR_2g023680 22.467 454 296 16 70 504 101 517 1.07e-17 86.3
MS.gene32947.t1 MTR_3g104560 28.777 278 167 8 241 506 144 402 1.66e-17 85.1
MS.gene32947.t1 MTR_2g010330 27.350 234 165 4 276 505 275 507 1.69e-17 85.5
MS.gene32947.t1 MTR_4g088420 31.250 192 126 4 294 484 20 206 1.92e-17 82.0
MS.gene32947.t1 MTR_2g072400 22.993 461 286 16 70 504 98 515 2.04e-17 85.5
MS.gene32947.t1 MTR_6g008620 28.261 230 147 9 232 453 249 468 3.05e-17 85.1
MS.gene32947.t1 MTR_7g098550 23.111 450 298 14 60 500 90 500 6.00e-17 84.0
MS.gene32947.t1 MTR_7g012860 24.149 323 213 10 168 481 172 471 6.43e-17 84.0
MS.gene32947.t1 MTR_0287s0060 24.149 323 213 10 168 481 172 471 6.43e-17 84.0
MS.gene32947.t1 MTR_3g014880 26.966 267 167 8 232 484 248 500 8.29e-17 83.6
MS.gene32947.t1 MTR_8g042060 25.275 273 175 8 243 500 225 483 8.70e-17 83.2
MS.gene32947.t1 MTR_7g012330 23.148 324 213 11 168 481 173 470 9.75e-17 83.2
MS.gene32947.t1 MTR_7g098550 23.111 450 290 14 60 500 90 492 1.19e-16 82.8
MS.gene32947.t1 MTR_8g012585 28.016 257 155 7 230 484 198 426 1.22e-16 82.8
MS.gene32947.t1 MTR_8g042060 25.275 273 175 8 243 500 261 519 1.22e-16 83.2
MS.gene32947.t1 MTR_6g008430 26.119 268 185 9 232 496 245 502 1.52e-16 82.8
MS.gene32947.t1 MTR_4g088400 27.451 255 173 7 232 484 250 494 1.59e-16 82.8
MS.gene32947.t1 MTR_0171s0030 25.562 356 238 14 153 498 72 410 2.01e-16 81.6
MS.gene32947.t1 MTR_8g042020 27.178 287 174 10 234 504 255 522 2.07e-16 82.4
MS.gene32947.t1 MTR_2g010300 27.602 221 141 5 290 506 285 490 2.18e-16 82.0
MS.gene32947.t1 MTR_8g076290 24.000 350 225 12 121 455 127 450 2.30e-16 82.0
MS.gene32947.t1 MTR_5g073250 26.117 291 184 9 229 505 228 501 4.30e-16 81.3
MS.gene32947.t1 MTR_6g008640 23.881 335 220 10 165 484 183 497 4.44e-16 81.3
MS.gene32947.t1 MTR_6g008600 25.403 248 167 6 237 476 256 493 4.74e-16 81.3
MS.gene32947.t1 MTR_7g103450 26.736 288 186 9 222 504 239 506 5.60e-16 80.9
MS.gene32947.t1 MTR_7g055793 26.070 257 167 6 258 504 280 523 1.03e-15 80.1
MS.gene32947.t1 MTR_7g055793 26.070 257 167 6 258 504 225 468 1.06e-15 79.7
MS.gene32947.t1 MTR_5g094550 26.871 294 189 8 222 505 223 500 1.46e-15 79.7
MS.gene32947.t1 MTR_4g088425 28.125 256 171 7 232 484 233 478 1.86e-15 79.3
MS.gene32947.t1 MTR_5g034900 28.358 201 139 4 308 505 319 517 2.17e-15 79.0
MS.gene32947.t1 MTR_8g104030 26.016 246 165 7 237 474 8 244 2.22e-15 77.0
MS.gene32947.t1 MTR_5g094570 25.496 353 223 14 167 505 175 501 2.33e-15 79.0
MS.gene32947.t1 MTR_7g075610 29.108 213 129 7 279 481 274 474 2.45e-15 79.0
MS.gene32947.t1 MTR_2g062680 32.484 157 73 4 277 432 14 138 2.48e-15 74.7
MS.gene32947.t1 MTR_4g031820 23.620 453 278 17 70 497 111 520 3.17e-15 78.6
MS.gene32947.t1 MTR_2g072340 22.314 484 298 17 50 504 81 515 3.23e-15 78.6
MS.gene32947.t1 MTR_4g104610 22.102 371 247 12 121 474 120 465 3.28e-15 78.6
MS.gene32947.t1 MTR_5g095290 24.847 326 203 11 167 481 177 471 4.04e-15 78.2
MS.gene32947.t1 MTR_8g104100 29.508 183 115 6 298 474 55 229 6.45e-15 75.5
MS.gene32947.t1 MTR_1g069200 20.386 466 335 16 44 502 73 509 7.32e-15 77.4
MS.gene32947.t1 MTR_8g036185 29.596 223 133 9 292 498 297 511 7.75e-15 77.4
MS.gene32947.t1 MTR_4g088405 32.308 195 126 5 291 484 219 408 1.14e-14 76.6
MS.gene32947.t1 MTR_5g021390 24.427 262 166 7 237 481 238 484 1.18e-14 76.6
MS.gene32947.t1 MTR_6g022450 25.723 311 218 9 200 505 207 509 1.40e-14 76.6
MS.gene32947.t1 MTR_5g073320 22.020 495 325 17 34 505 46 502 2.13e-14 75.9
MS.gene32947.t1 MTR_6g004570 41.818 110 52 4 245 343 4 112 2.50e-14 73.2
MS.gene32947.t1 MTR_7g087520 24.348 460 309 19 31 474 42 478 3.08e-14 75.5
MS.gene32947.t1 MTR_2g061750 27.957 186 117 4 75 247 13 194 3.50e-14 72.0
MS.gene32947.t1 MTR_6g042610 23.675 283 207 8 207 484 215 493 3.68e-14 75.1
MS.gene32947.t1 MTR_2g061740 27.957 186 117 4 75 247 13 194 4.07e-14 71.6
MS.gene32947.t1 MTR_8g469360 24.784 347 229 10 163 504 104 423 4.38e-14 74.7
MS.gene32947.t1 MTR_2g055430 20.796 452 306 14 70 504 101 517 5.18e-14 74.7
MS.gene32947.t1 MTR_5g070920 23.077 299 208 7 211 500 205 490 5.78e-14 74.7
MS.gene32947.t1 MTR_4g104660 22.961 466 308 16 29 480 55 483 7.31e-14 74.3
MS.gene32947.t1 MTR_1g035660 34.884 129 63 5 161 287 22 131 1.03e-13 68.9
MS.gene32947.t1 MTR_5g070690 25.517 290 184 9 212 486 204 476 1.14e-13 73.6
MS.gene32947.t1 MTR_5g070800 25.517 290 184 9 212 486 204 476 1.14e-13 73.6
MS.gene32947.t1 MTR_2g450040 22.581 465 314 17 32 476 44 482 1.15e-13 73.6
MS.gene32947.t1 MTR_8g466180 25.830 271 181 7 221 481 212 472 1.58e-13 73.2
MS.gene32947.t1 MTR_5g070710 22.692 520 328 21 9 500 15 488 1.63e-13 73.2
MS.gene32947.t1 MTR_7g075580 26.295 251 165 9 264 502 257 499 1.67e-13 73.2
MS.gene32947.t1 MTR_4g104570 31.579 152 96 4 305 455 1 145 1.70e-13 69.7
MS.gene32947.t1 MTR_5g009110 25.000 300 193 9 109 393 1 283 1.77e-13 71.6
MS.gene32947.t1 MTR_4g089055 24.768 323 213 9 167 481 186 486 2.39e-13 72.8
MS.gene32947.t1 MTR_2g072380 26.545 275 161 8 238 504 109 350 2.46e-13 71.6
MS.gene32947.t1 MTR_1g035140 26.744 258 170 8 232 481 225 471 3.08e-13 72.4
MS.gene32947.t1 MTR_2g061200 23.605 233 159 5 282 504 305 528 3.15e-13 72.4
MS.gene32947.t1 MTR_5g018500 26.543 162 112 5 317 476 4 160 3.29e-13 68.9
MS.gene32947.t1 MTR_4g104540 31.818 154 97 4 303 455 230 376 3.87e-13 71.6
MS.gene32947.t1 MTR_4g031820 34.416 154 77 7 355 497 358 498 4.06e-13 72.0
MS.gene32947.t1 MTR_2g072380 26.545 275 161 8 238 504 249 490 4.34e-13 71.6
MS.gene32947.t1 MTR_4g109470 25.817 306 190 13 211 501 208 491 4.98e-13 71.6
MS.gene32947.t1 MTR_2g065360 21.563 371 249 11 121 478 99 440 5.32e-13 71.6
MS.gene32947.t1 MTR_3g058000 26.199 271 180 9 221 481 216 476 5.72e-13 71.6
MS.gene32947.t1 MTR_6g084900 26.794 209 142 5 303 505 65 268 6.04e-13 69.7
MS.gene32947.t1 MTR_2g072310 24.535 269 174 6 238 504 109 350 8.59e-13 70.1
MS.gene32947.t1 MTR_5g095260 23.810 378 232 13 121 481 134 472 1.02e-12 70.9
MS.gene32947.t1 MTR_2g055470 20.575 452 307 14 70 504 101 517 1.09e-12 70.5
MS.gene32947.t1 MTR_2g072420 32.414 145 78 6 369 504 7 140 1.17e-12 65.9
MS.gene32947.t1 MTR_5g070830 28.324 173 111 5 303 471 412 575 1.60e-12 70.5
MS.gene32947.t1 MTR_5g091760 24.762 315 199 11 143 455 150 428 1.80e-12 69.7
MS.gene32947.t1 MTR_7g075540 27.652 264 158 11 257 503 251 498 2.55e-12 69.3
MS.gene32947.t1 MTR_6g084770 21.994 341 246 10 145 481 152 476 3.50e-12 68.9
MS.gene32947.t1 MTR_2g072260 21.677 489 309 18 45 504 67 510 4.19e-12 68.9
MS.gene32947.t1 MTR_5g070850 22.609 345 228 11 145 474 152 472 6.54e-12 68.2
MS.gene32947.t1 MTR_4g095050 25.294 340 208 17 167 488 173 484 7.04e-12 68.2
MS.gene32947.t1 MTR_4g062500 21.196 368 261 12 145 498 150 502 7.27e-12 68.2
MS.gene32947.t1 MTR_2g073480 22.965 344 213 11 147 481 84 384 8.68e-12 67.4
MS.gene32947.t1 MTR_4g077210 25.778 225 154 7 232 455 235 447 9.32e-12 67.8
MS.gene32947.t1 MTR_4g094775 27.966 236 151 8 239 474 241 457 1.22e-11 67.4
MS.gene32947.t1 MTR_2g437840 29.596 223 136 10 239 460 241 443 1.27e-11 67.4
MS.gene32947.t1 MTR_5g007460 22.016 377 261 14 107 474 88 440 1.30e-11 67.0
MS.gene32947.t1 MTR_3g467200 24.710 259 177 7 237 484 260 511 1.30e-11 67.4
MS.gene32947.t1 MTR_0638s0020 21.988 332 226 10 156 478 90 397 1.37e-11 67.0
MS.gene32947.t1 MTR_2g072250 26.259 278 158 9 238 504 272 513 1.39e-11 67.0
MS.gene32947.t1 MTR_2g073440 22.965 344 213 11 147 481 151 451 1.43e-11 67.0
MS.gene32947.t1 MTR_3g058220 25.672 335 209 13 160 481 165 472 1.83e-11 66.6
MS.gene32947.t1 MTR_1g107295 23.757 181 132 4 294 474 304 478 1.93e-11 66.6
MS.gene32947.t1 MTR_5g016440 23.380 432 271 17 84 507 110 489 2.16e-11 66.6
MS.gene32947.t1 MTR_5g070700 23.826 298 206 10 212 500 206 491 2.46e-11 66.2
MS.gene32947.t1 MTR_1g097220 21.012 257 190 8 258 507 280 530 3.95e-11 65.9
MS.gene32947.t1 MTR_7g092620 22.977 309 216 10 203 498 198 497 4.06e-11 65.9
MS.gene32947.t1 MTR_4g088195 20.211 475 320 14 31 482 40 478 4.60e-11 65.5
MS.gene32947.t1 MTR_4g088160 21.561 269 184 7 226 478 217 474 4.64e-11 65.5
MS.gene32947.t1 MTR_1750s0010 28.289 152 103 3 304 455 1 146 4.98e-11 61.6
MS.gene32947.t1 MTR_5g070840 31.452 124 80 2 357 478 23 143 5.53e-11 62.0
MS.gene32947.t1 MTR_4g104640 20.499 361 263 10 119 474 140 481 6.93e-11 65.1
MS.gene32947.t1 MTR_3g057970 23.636 275 186 9 208 474 197 455 7.38e-11 64.7
MS.gene32947.t1 MTR_3g467220 22.846 267 182 8 233 489 247 499 7.46e-11 64.7
MS.gene32947.t1 MTR_6g084090 61.538 39 15 0 286 324 12 50 8.49e-11 57.8
MS.gene32947.t1 MTR_3g057860 23.467 375 245 14 121 482 129 474 9.59e-11 64.3
MS.gene32947.t1 MTR_3g058210 24.653 288 191 9 207 481 200 474 9.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32947.t1 AT2G23180 42.054 516 284 4 1 505 1 512 6.58e-145 426
MS.gene32947.t1 AT4G39490 42.829 516 272 6 7 507 11 518 1.77e-138 410
MS.gene32947.t1 AT4G39480 43.164 512 273 5 7 507 11 515 1.51e-136 404
MS.gene32947.t1 AT1G47620 42.062 485 260 5 32 506 43 516 4.07e-134 399
MS.gene32947.t1 AT4G39500 41.992 512 280 7 4 506 14 517 7.63e-134 398
MS.gene32947.t1 AT4G32170 41.096 511 289 5 1 506 1 504 4.68e-132 393
MS.gene32947.t1 AT1G57750 39.300 514 284 5 4 506 1 497 3.65e-131 390
MS.gene32947.t1 AT4G39500 42.105 475 261 5 38 506 1 467 4.60e-127 379
MS.gene32947.t1 AT4G39510 38.986 513 299 4 1 506 1 506 1.02e-126 379
MS.gene32947.t1 AT2G21910 40.535 486 268 5 32 507 34 508 3.73e-126 378
MS.gene32947.t1 AT1G65340 39.425 487 279 3 23 504 27 502 3.81e-125 375
MS.gene32947.t1 AT5G08250 38.491 517 294 9 4 507 37 542 5.36e-125 376
MS.gene32947.t1 AT5G52320 40.741 486 273 4 23 504 27 501 5.52e-124 372
MS.gene32947.t1 AT5G23190 37.354 514 305 7 4 507 36 542 1.13e-121 368
MS.gene32947.t1 AT5G52320 40.333 481 272 4 23 499 27 496 1.62e-121 365
MS.gene32947.t1 AT5G08250 39.104 491 275 9 30 507 1 480 6.41e-120 361
MS.gene32947.t1 AT5G02900 39.341 516 267 9 1 506 1 480 1.65e-112 342
MS.gene32947.t1 AT3G26125 35.366 492 297 6 32 507 48 534 4.84e-108 332
MS.gene32947.t1 AT1G63710 38.525 488 272 10 33 505 33 507 3.63e-107 329
MS.gene32947.t1 AT1G24540 36.458 480 293 6 33 505 46 520 3.56e-106 327
MS.gene32947.t1 AT2G45970 37.551 490 277 9 33 505 33 510 1.13e-104 323
MS.gene32947.t1 AT1G13150 35.378 489 291 7 33 507 42 519 1.75e-103 320
MS.gene32947.t1 AT1G13140 34.674 522 307 10 6 507 19 526 8.99e-102 316
MS.gene32947.t1 AT4G00360 35.810 525 297 13 1 505 7 511 1.70e-101 316
MS.gene32947.t1 AT1G57750 36.878 442 251 5 4 434 1 425 2.18e-100 309
MS.gene32947.t1 AT1G13140 34.308 513 295 9 6 507 19 500 3.06e-98 306
MS.gene32947.t1 AT1G01600 36.419 497 276 11 33 505 33 513 3.01e-97 305
MS.gene32947.t1 AT5G58860 36.885 488 276 10 34 505 37 508 1.62e-96 301
MS.gene32947.t1 AT3G56630 33.676 487 289 12 32 505 33 498 2.75e-83 267
MS.gene32947.t1 AT1G34540 34.091 484 290 13 32 505 33 497 4.21e-82 264
MS.gene32947.t1 AT2G27690 34.266 429 260 9 76 502 75 483 1.76e-77 251
MS.gene32947.t1 AT1G69500 31.343 536 324 9 3 506 1 524 4.28e-77 251
MS.gene32947.t1 AT5G63450 33.790 438 262 12 77 505 84 502 1.68e-75 247
MS.gene32947.t1 AT5G63450 33.790 438 262 12 77 505 142 560 6.49e-75 247
MS.gene32947.t1 AT3G48520 31.102 508 319 14 10 506 13 500 8.65e-74 242
MS.gene32947.t1 AT2G45510 32.554 513 319 15 1 505 15 508 9.38e-74 242
MS.gene32947.t1 AT2G44890 34.792 457 277 13 50 498 58 501 2.83e-72 238
MS.gene32947.t1 AT3G01900 31.762 488 300 12 26 505 28 490 1.58e-70 233
MS.gene32947.t1 AT2G44890 33.333 459 263 15 50 498 58 483 3.77e-66 222
MS.gene32947.t1 AT1G31800 24.536 485 333 16 32 506 109 570 7.44e-33 132
MS.gene32947.t1 AT3G53130 24.601 439 300 11 77 505 122 539 5.31e-31 126
MS.gene32947.t1 AT4G15110 21.881 521 335 17 36 506 81 579 5.76e-25 108
MS.gene32947.t1 AT3G14680 26.154 455 285 18 56 497 88 504 8.02e-25 108
MS.gene32947.t1 AT2G26710 24.375 480 311 15 38 500 66 510 7.17e-24 105
MS.gene32947.t1 AT5G24900 22.869 481 318 15 45 503 76 525 8.44e-24 105
MS.gene32947.t1 AT5G51900 28.378 296 147 8 219 506 2 240 1.94e-23 99.8
MS.gene32947.t1 AT3G26210 25.061 407 283 12 105 505 110 500 9.10e-23 101
MS.gene32947.t1 AT3G14640 24.503 453 297 14 56 497 88 506 1.88e-22 100
MS.gene32947.t1 AT3G14640 24.503 453 297 14 56 497 110 528 2.03e-22 100
MS.gene32947.t1 AT5G24900 27.338 278 177 7 237 503 145 408 8.59e-22 97.8
MS.gene32947.t1 AT3G14690 23.977 513 322 18 17 500 34 507 9.00e-22 99.0
MS.gene32947.t1 AT3G14690 23.985 517 325 18 17 504 69 546 1.19e-21 98.6
MS.gene32947.t1 AT5G52400 30.544 239 151 5 266 500 287 514 1.48e-21 98.2
MS.gene32947.t1 AT3G20140 25.138 362 234 12 149 499 163 498 6.56e-21 96.3
MS.gene32947.t1 AT5G57260 25.729 377 249 15 118 484 119 474 9.76e-21 95.5
MS.gene32947.t1 AT1G13110 22.973 370 270 9 106 474 112 467 1.05e-20 95.5
MS.gene32947.t1 AT3G14610 24.183 459 290 18 56 497 87 504 5.28e-20 93.6
MS.gene32947.t1 AT4G31940 30.075 266 165 8 237 490 248 504 5.69e-20 93.6
MS.gene32947.t1 AT4G13310 26.346 353 214 14 135 474 142 461 7.85e-20 92.8
MS.gene32947.t1 AT4G31950 29.779 272 169 10 233 491 231 493 8.07e-20 92.8
MS.gene32947.t1 AT1G66030 30.636 173 102 3 1 162 1 166 8.60e-20 87.0
MS.gene32947.t1 AT2G46960 23.028 469 291 15 57 500 89 512 1.42e-19 92.0
MS.gene32947.t1 AT2G46950 22.766 470 312 13 48 500 130 565 1.88e-19 92.0
MS.gene32947.t1 AT3G25180 23.776 429 275 13 77 484 86 483 1.94e-19 91.7
MS.gene32947.t1 AT3G26830 25.737 373 256 13 105 474 107 461 2.05e-19 91.7
MS.gene32947.t1 AT2G24180 25.882 340 223 11 167 498 173 491 2.08e-19 91.7
MS.gene32947.t1 AT5G24910 21.284 545 362 18 1 505 15 532 2.72e-19 91.3
MS.gene32947.t1 AT1G13100 23.797 374 263 12 106 474 105 461 8.29e-19 89.7
MS.gene32947.t1 AT4G27710 22.616 451 313 11 57 500 91 512 3.48e-18 87.8
MS.gene32947.t1 AT4G13290 25.796 314 196 11 167 474 172 454 3.62e-18 87.8
MS.gene32947.t1 AT2G45570 26.163 344 233 13 143 481 152 479 3.66e-18 87.8
MS.gene32947.t1 AT5G35715 26.000 350 229 10 145 484 81 410 5.70e-18 86.7
MS.gene32947.t1 AT3G14630 24.520 469 292 17 51 497 72 500 9.41e-18 86.7
MS.gene32947.t1 AT2G45560 26.801 347 206 15 153 481 162 478 9.45e-18 86.7
MS.gene32947.t1 AT3G14630 24.837 459 281 18 51 486 127 544 1.30e-17 86.3
MS.gene32947.t1 AT1G64950 25.591 254 177 4 260 505 258 507 1.63e-17 85.9
MS.gene32947.t1 AT4G31970 28.947 266 168 8 237 490 247 503 1.72e-17 85.9
MS.gene32947.t1 AT2G45550 24.324 370 263 10 114 481 124 478 1.78e-17 85.5
MS.gene32947.t1 AT1G13090 23.387 372 266 13 105 474 107 461 3.23e-17 84.7
MS.gene32947.t1 AT1G64940 25.000 252 178 4 261 505 261 508 4.22e-17 84.3
MS.gene32947.t1 AT1G13080 22.983 409 261 14 91 481 100 472 4.48e-17 84.3
MS.gene32947.t1 AT3G26180 26.633 398 241 19 101 481 109 472 4.90e-17 84.3
MS.gene32947.t1 AT4G15350 23.885 381 242 15 146 507 153 504 5.48e-17 84.0
MS.gene32947.t1 AT2G46960 24.432 352 223 11 158 500 79 396 5.75e-17 83.2
MS.gene32947.t1 AT1G13080 23.200 375 242 12 123 481 10 354 8.40e-17 82.8
MS.gene32947.t1 AT3G26330 24.194 372 251 15 118 481 120 468 9.01e-17 83.6
MS.gene32947.t1 AT5G06900 25.000 368 238 15 121 478 126 465 9.14e-17 83.6
MS.gene32947.t1 AT3G48270 23.288 292 193 10 167 453 166 431 1.13e-16 83.2
MS.gene32947.t1 AT3G48300 25.246 305 175 10 167 455 164 431 1.25e-16 82.8
MS.gene32947.t1 AT3G48300 25.246 305 175 10 167 455 166 433 1.25e-16 82.8
MS.gene32947.t1 AT3G26170 25.450 389 251 16 106 481 110 472 7.10e-16 80.5
MS.gene32947.t1 AT3G03470 26.432 227 159 3 286 505 284 509 7.62e-16 80.5
MS.gene32947.t1 AT2G45580 25.740 338 222 11 167 494 21 339 1.03e-15 79.0
MS.gene32947.t1 AT1G01190 26.531 245 160 8 272 505 301 536 1.16e-15 80.1
MS.gene32947.t1 AT1G01190 26.531 245 160 8 272 505 296 531 1.18e-15 80.1
MS.gene32947.t1 AT3G26160 25.141 354 223 16 118 455 119 446 1.20e-15 80.1
MS.gene32947.t1 AT2G45580 25.617 324 213 10 167 481 175 479 1.43e-15 79.7
MS.gene32947.t1 AT5G38450 21.627 467 325 13 47 500 73 511 2.21e-15 79.3
MS.gene32947.t1 AT3G20950 23.952 334 227 11 148 474 166 479 2.40e-15 79.0
MS.gene32947.t1 AT1G67110 30.612 147 97 2 354 500 364 505 2.56e-15 79.0
MS.gene32947.t1 AT1G33730 25.301 332 230 12 153 481 26 342 2.95e-15 77.8
MS.gene32947.t1 AT1G33730 25.301 332 230 12 153 481 26 342 2.95e-15 77.8
MS.gene32947.t1 AT3G14660 26.792 265 159 9 240 491 110 352 3.27e-15 77.8
MS.gene32947.t1 AT3G26200 25.668 374 247 13 118 481 117 469 3.62e-15 78.6
MS.gene32947.t1 AT4G12320 21.680 512 326 19 2 482 18 485 5.51e-15 77.8
MS.gene32947.t1 AT5G25120 19.920 497 343 16 7 484 7 467 5.52e-15 77.8
MS.gene32947.t1 AT4G37340 23.596 356 225 14 116 459 120 440 9.77e-15 77.0
MS.gene32947.t1 AT2G22330 24.643 280 187 9 219 481 244 516 1.25e-14 77.0
MS.gene32947.t1 AT3G53300 23.404 470 306 17 29 481 37 469 1.50e-14 76.6
MS.gene32947.t1 AT2G22330 24.643 280 187 9 219 481 267 539 1.57e-14 76.6
MS.gene32947.t1 AT2G25160 27.575 301 184 12 167 453 178 458 1.73e-14 76.3
MS.gene32947.t1 AT5G24950 21.884 361 255 10 119 474 122 460 1.98e-14 76.3
MS.gene32947.t1 AT5G04330 23.320 253 178 6 237 481 231 475 2.12e-14 75.9
MS.gene32947.t1 AT1G64930 27.027 222 150 6 290 505 293 508 2.21e-14 75.9
MS.gene32947.t1 AT3G26320 23.118 372 253 14 119 479 121 470 2.43e-14 75.9
MS.gene32947.t1 AT4G36220 24.453 274 183 7 222 481 223 486 2.56e-14 75.9
MS.gene32947.t1 AT2G30770 22.715 361 247 12 121 474 125 460 2.59e-14 75.9
MS.gene32947.t1 AT3G20940 23.724 333 230 11 148 474 162 476 4.05e-14 75.1
MS.gene32947.t1 AT2G26170 27.984 243 163 5 270 505 201 438 4.97e-14 74.7
MS.gene32947.t1 AT4G37330 22.807 399 241 13 84 474 113 452 5.24e-14 74.7
MS.gene32947.t1 AT4G39950 20.952 525 337 20 1 481 24 514 5.83e-14 74.7
MS.gene32947.t1 AT4G39950 20.952 525 337 20 1 481 64 554 6.61e-14 74.7
MS.gene32947.t1 AT2G26170 28.226 248 156 6 270 505 284 521 6.62e-14 74.7
MS.gene32947.t1 AT3G48280 26.250 240 148 9 222 453 213 431 1.06e-13 73.9
MS.gene32947.t1 AT3G26270 23.696 460 298 18 37 480 50 472 1.14e-13 73.6
MS.gene32947.t1 AT1G50560 24.377 361 245 15 147 499 165 505 1.91e-13 73.2
MS.gene32947.t1 AT3G20100 23.656 372 246 15 148 505 161 508 2.71e-13 72.4
MS.gene32947.t1 AT2G27010 22.739 387 244 17 142 507 134 486 3.07e-13 72.4
MS.gene32947.t1 AT2G14100 25.706 354 221 13 167 505 181 507 3.45e-13 72.4
MS.gene32947.t1 AT4G12310 24.265 272 176 9 222 482 235 487 3.62e-13 72.4
MS.gene32947.t1 AT4G15360 20.954 482 319 19 1 458 13 456 4.15e-13 72.0
MS.gene32947.t1 AT5G25180 20.808 495 335 17 7 481 7 464 1.00e-12 70.9
MS.gene32947.t1 AT3G44250 26.031 388 256 14 102 481 104 468 2.01e-12 69.7
MS.gene32947.t1 AT1G50520 22.274 431 291 18 92 505 107 510 3.26e-12 69.3
MS.gene32947.t1 AT4G31500 23.724 333 233 12 167 494 167 483 4.11e-12 68.9
MS.gene32947.t1 AT3G26180 27.586 232 138 8 254 481 133 338 4.46e-12 68.2
MS.gene32947.t1 AT4G12300 20.445 494 352 17 2 482 18 483 5.49e-12 68.6
MS.gene32947.t1 AT3G20130 28.125 224 141 10 292 505 267 480 5.79e-12 68.2
MS.gene32947.t1 AT4G13770 23.729 236 172 4 247 481 242 470 5.88e-12 68.2
MS.gene32947.t1 AT3G20130 28.125 224 141 10 292 505 295 508 7.59e-12 68.2
MS.gene32947.t1 AT3G20960 23.220 323 215 13 147 459 57 356 1.04e-11 67.4
MS.gene32947.t1 AT1G66540 23.292 322 212 12 159 474 50 342 1.18e-11 67.0
MS.gene32947.t1 AT5G05260 21.053 475 327 18 26 474 36 488 1.34e-11 67.4
MS.gene32947.t1 AT1G64900 27.692 195 132 5 317 506 315 505 1.38e-11 67.0
MS.gene32947.t1 AT3G20960 23.765 324 212 13 147 459 160 459 1.80e-11 67.0
MS.gene32947.t1 AT5G09970 21.961 255 189 6 255 504 285 534 1.85e-11 67.0
MS.gene32947.t1 AT1G33720 26.738 187 127 6 297 481 193 371 2.34e-11 66.2
MS.gene32947.t1 AT3G32047 23.529 357 244 14 124 474 139 472 2.69e-11 66.2
MS.gene32947.t1 AT3G20090 22.090 335 234 12 147 474 24 338 2.73e-11 65.9
MS.gene32947.t1 AT3G20090 21.488 363 258 12 119 474 134 476 2.73e-11 66.2
MS.gene32947.t1 AT4G37400 24.088 274 180 8 239 506 235 486 2.74e-11 66.2
MS.gene32947.t1 AT4G37370 26.457 223 141 7 239 459 238 439 2.76e-11 66.2
MS.gene32947.t1 AT3G48290 27.097 155 100 4 303 453 288 433 2.83e-11 66.2
MS.gene32947.t1 AT4G15380 25.455 220 152 6 292 505 291 504 3.51e-11 65.9
MS.gene32947.t1 AT3G48310 19.239 473 325 15 23 480 29 459 4.19e-11 65.5
MS.gene32947.t1 AT3G28740 30.270 185 114 6 298 480 298 469 4.79e-11 65.5
MS.gene32947.t1 AT3G26230 25.490 255 165 8 237 480 229 469 5.59e-11 65.1
MS.gene32947.t1 AT1G66540 27.072 181 121 5 294 474 114 283 6.54e-11 64.3
MS.gene32947.t1 AT3G48290 26.623 154 100 4 304 453 315 459 8.48e-11 64.7

Find 94 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACCTGCACTTTCCTATT+TGG 0.145321 1.4:+20096487 MS.gene32947:CDS
ATTCCAAGTATTGGCCAATT+TGG 0.171304 1.4:-20096040 None:intergenic
TTCTGTTGCGTCTCCAACTA+TGG 0.203732 1.4:-20096006 None:intergenic
TAGTATAATACCCTTGTATT+TGG 0.207296 1.4:-20097141 None:intergenic
CAGGTCTCAGTTGGTTCTTT+TGG 0.226270 1.4:+20096893 MS.gene32947:CDS
GTTTCTTCTCTTGACCAATT+TGG 0.239281 1.4:-20096651 None:intergenic
CATAGTGATTGGAAATATTA+TGG 0.276511 1.4:-20096078 None:intergenic
TCTTTACCCAAACAACTTCT+TGG 0.276591 1.4:-20097297 None:intergenic
CACATCATAAGCAAGAATTT+TGG 0.280585 1.4:+20096208 MS.gene32947:CDS
TGGGAAGGATGGAGAAAATA+TGG 0.295185 1.4:+20097175 MS.gene32947:CDS
TGCAGGGCCAAGAAGTTGTT+TGG 0.321225 1.4:+20097290 MS.gene32947:CDS
ATTATACTATTTGTATTCAA+TGG 0.326298 1.4:+20097155 MS.gene32947:CDS
ATAGAAAGCCTTGGAGTTAC+AGG 0.329072 1.4:-20097396 None:intergenic
TTCCAAGTATTGGCCAATTT+GGG 0.342004 1.4:-20096039 None:intergenic
TGATTCCGATGAATGGAAAA+AGG 0.359177 1.4:+20096297 MS.gene32947:CDS
GAAATGCAATCATCCCAAAT+TGG 0.367942 1.4:+20096026 MS.gene32947:CDS
CACTTTCTTTGAAATGAAGA+TGG 0.370803 1.4:+20097323 MS.gene32947:CDS
TCATCGGAATCAGAATTTAA+AGG 0.384883 1.4:-20096286 None:intergenic
TGCAGCTTCCATACAAAAGT+TGG 0.389686 1.4:-20096619 None:intergenic
TGGCTGCCGCGGCTATACTA+TGG 0.392000 1.4:+20097343 MS.gene32947:CDS
TCTTCTTATTTGTCCATAGT+TGG 0.398646 1.4:+20095993 MS.gene32947:CDS
TAAATTCTGATTCCGATGAA+TGG 0.404261 1.4:+20096290 MS.gene32947:CDS
ATCCCAAATTGGCCAATACT+TGG 0.406326 1.4:+20096037 MS.gene32947:CDS
AATCTATTCTTAGCGGGAAA+TGG 0.410968 1.4:+20096859 MS.gene32947:CDS
CGGCTATACTATGGAAGTTT+CGG 0.414473 1.4:+20097352 MS.gene32947:CDS
AATTTGGATCGAATCCAAAT+AGG 0.426721 1.4:-20096501 None:intergenic
ATGATGTGGTGTACATTCAT+TGG 0.429561 1.4:-20096193 None:intergenic
CCAAGGCTTTCTATTACCCT+TGG 0.433155 1.4:+20097405 MS.gene32947:CDS
CGCTGGTTCACGAGCACCAC+TGG 0.435293 1.4:+20096154 MS.gene32947:CDS
GAGCTATATGTGAAGCCTTA+AGG 0.440405 1.4:+20097043 MS.gene32947:CDS
GAAGTTTCGGATACATTTAG+TGG 0.442454 1.4:+20097365 MS.gene32947:CDS
ATCAAAAGTGAACCTTGTTA+AGG 0.442728 1.4:-20096464 None:intergenic
TATGGACAAATAAGAAGAAC+AGG 0.443077 1.4:-20095988 None:intergenic
TAAAGCTCTTTCTATGATTG+AGG 0.448525 1.4:+20096570 MS.gene32947:CDS
GGAAATGGCACAGTTAGTTC+AGG 0.453055 1.4:+20096874 MS.gene32947:CDS
TGGAATGAAACATGGCTTGA+AGG 0.454745 1.4:+20097425 MS.gene32947:CDS
CTGCAGAAGTGGCTCCAAAT+TGG 0.454751 1.4:+20096637 MS.gene32947:CDS
GGTTATATAATCATAGTGAT+TGG 0.455646 1.4:-20096089 None:intergenic
TTATACTATTTGTATTCAAT+GGG 0.456853 1.4:+20097156 MS.gene32947:CDS
CAGTTAGTTCAGGTCTCAGT+TGG 0.465641 1.4:+20096884 MS.gene32947:CDS
TCAAGCCATGTTTCATTCCA+AGG 0.467966 1.4:-20097422 None:intergenic
GCAGGGCCAAGAAGTTGTTT+GGG 0.474195 1.4:+20097291 MS.gene32947:CDS
TTGAGGAAGCAGTAGCCTAC+AGG 0.476224 1.4:+20096587 MS.gene32947:CDS
ATACTGAAAGGAGCGGGAAA+AGG 0.484482 1.4:+20096799 MS.gene32947:CDS
ATAATCTTGACTTCCACAAC+AGG 0.485102 1.4:-20096931 None:intergenic
CATGATCAAGAAACGGTAGT+AGG 0.494129 1.4:-20096405 None:intergenic
AAACTTGATCACTTCAATTG+TGG 0.501453 1.4:+20096990 MS.gene32947:CDS
AAGTTCATAGCTTTCAATGC+AGG 0.505996 1.4:+20097273 MS.gene32947:CDS
GGGAAGGATGGAGAAAATAT+GGG 0.508910 1.4:+20097176 MS.gene32947:CDS
AACAATTTCAGTCATGATCT+CGG 0.509884 1.4:+20096532 MS.gene32947:CDS
TACTGAAAGGAGCGGGAAAA+GGG 0.515947 1.4:+20096800 MS.gene32947:CDS
GACGGTAGCATTCCAAGTAT+TGG 0.519839 1.4:-20096049 None:intergenic
TTTGTATTCAATGGGAAGGA+TGG 0.527756 1.4:+20097164 MS.gene32947:CDS
ACTATTTGTATTCAATGGGA+AGG 0.527829 1.4:+20097160 MS.gene32947:CDS
AGTTCATAGCTTTCAATGCA+GGG 0.528807 1.4:+20097274 MS.gene32947:CDS
CAAGCCATGTTTCATTCCAA+GGG 0.533438 1.4:-20097421 None:intergenic
TACAGGAGGATAAAGCCTTA+AGG 0.537529 1.4:-20097058 None:intergenic
ATGTTCATGATTCAGTGCAT+TGG 0.538171 1.4:+20095950 MS.gene32947:CDS
TGTTTCATGTCATCCTGTTG+TGG 0.543232 1.4:+20096918 MS.gene32947:CDS
TTTCGGATACATTTAGTGGA+AGG 0.543334 1.4:+20097369 MS.gene32947:CDS
GCACTCAATCTATTCTTAGC+GGG 0.543948 1.4:+20096853 MS.gene32947:CDS
AAAGAGATACTGAAAGGAGC+GGG 0.546629 1.4:+20096793 MS.gene32947:CDS
ATTCAGCAGCACTAGAGAAG+TGG 0.549406 1.4:+20096747 MS.gene32947:CDS
TTGTATGGAAGCTGCAGAAG+TGG 0.557104 1.4:+20096626 MS.gene32947:CDS
TGAGGAAGCAGTAGCCTACA+GGG 0.557116 1.4:+20096588 MS.gene32947:CDS
TTCATGTAAGTCCAAATACA+AGG 0.563468 1.4:+20097130 MS.gene32947:CDS
ATTACCCTTGGAATGAAACA+TGG 0.564742 1.4:+20097417 MS.gene32947:CDS
CCAAGGGTAATAGAAAGCCT+TGG 0.572510 1.4:-20097405 None:intergenic
TGCACTCAATCTATTCTTAG+CGG 0.572533 1.4:+20096852 MS.gene32947:CDS
GAATCCAAATAGGAAAGTGC+AGG 0.575632 1.4:-20096491 None:intergenic
TGAAATGAAGATGGCTGCCG+CGG 0.575989 1.4:+20097332 MS.gene32947:CDS
TTGATAAAAGAGATACTGAA+AGG 0.579823 1.4:+20096787 MS.gene32947:CDS
ATGGATGCATGATCAAGAAA+CGG 0.582819 1.4:-20096412 None:intergenic
GGACTTACATGAACTCCACT+AGG 0.584023 1.4:-20097120 None:intergenic
CAAAATTCTTGCTTATGATG+TGG 0.596021 1.4:-20096207 None:intergenic
TGGAATTTAAGCCTGAGAGA+TGG 0.597446 1.4:+20097211 MS.gene32947:CDS
ACTTGCATGATGCCTTAACA+AGG 0.609106 1.4:+20096452 MS.gene32947:CDS
AAAAGAGATACTGAAAGGAG+CGG 0.610407 1.4:+20096792 MS.gene32947:CDS
AATATGGGGAGAAGACTGCA+TGG 0.624387 1.4:+20097191 MS.gene32947:CDS
AAAGCTGATATACTTCCTAG+TGG 0.629809 1.4:+20097105 MS.gene32947:CDS
AAGGTCATCCTGTAACTCCA+AGG 0.643847 1.4:+20097388 MS.gene32947:CDS
GAAATATTATGGAGAGCCGA+CGG 0.656271 1.4:-20096067 None:intergenic
AAAGCTATGAACTTGTAAGA+CGG 0.664105 1.4:-20097264 None:intergenic
AGTTGGAAAGAAGCCCCTGT+AGG 0.664765 1.4:-20096602 None:intergenic
GATAAACTAGTTTACCTCCA+CGG 0.672570 1.4:+20097021 MS.gene32947:CDS
GGAAGGATGGAGAAAATATG+GGG 0.679844 1.4:+20097177 MS.gene32947:CDS
ATCCATAGTAAAAGCTCACG+TGG 0.685507 1.4:+20096429 MS.gene32947:CDS
TCATGTAAGTCCAAATACAA+GGG 0.690643 1.4:+20097131 MS.gene32947:CDS
AAACTTCCATAGTATAGCCG+CGG 0.711701 1.4:-20097349 None:intergenic
AGGCTTCACATATAGCTCCG+TGG 0.717814 1.4:-20097038 None:intergenic
AATACTTGGAATGCTACCGT+CGG 0.718723 1.4:+20096051 MS.gene32947:CDS
ATCGCTCGTAAAGATACCAG+TGG 0.722194 1.4:-20096170 None:intergenic
GAGGAAGCAGTAGCCTACAG+GGG 0.732739 1.4:+20096589 MS.gene32947:CDS
CTTCACATATAGCTCCGTGG+AGG 0.753666 1.4:-20097035 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATACTATTTGTATTCAA+TGG + chr1.4:20097155-20097174 MS.gene32947:CDS 15.0%
!! TTATACTATTTGTATTCAAT+GGG + chr1.4:20097156-20097175 MS.gene32947:CDS 15.0%
!!! AAAGAAACTTTTGAAACTTT+TGG + chr1.4:20096256-20096275 MS.gene32947:CDS 20.0%
! CATAGTGATTGGAAATATTA+TGG - chr1.4:20096081-20096100 None:intergenic 25.0%
! GGTTATATAATCATAGTGAT+TGG - chr1.4:20096092-20096111 None:intergenic 25.0%
! TAGTATAATACCCTTGTATT+TGG - chr1.4:20097144-20097163 None:intergenic 25.0%
! TTGATAAAAGAGATACTGAA+AGG + chr1.4:20096787-20096806 MS.gene32947:CDS 25.0%
!!! AAATTGTTTTGAAGGCAATT+TGG - chr1.4:20096520-20096539 None:intergenic 25.0%
!!! ACCATGATGTTTTAAAACTA+AGG - chr1.4:20096113-20096132 None:intergenic 25.0%
!!! ACCTTAGTTTTAAAACATCA+TGG + chr1.4:20096109-20096128 MS.gene32947:CDS 25.0%
!!! TTAGTTTTAAAACATCATGG+TGG + chr1.4:20096112-20096131 MS.gene32947:CDS 25.0%
AAACTTGATCACTTCAATTG+TGG + chr1.4:20096990-20097009 MS.gene32947:CDS 30.0%
AAAGCTATGAACTTGTAAGA+CGG - chr1.4:20097267-20097286 None:intergenic 30.0%
AACAATTTCAGTCATGATCT+CGG + chr1.4:20096532-20096551 MS.gene32947:CDS 30.0%
AATTTGGATCGAATCCAAAT+AGG - chr1.4:20096504-20096523 None:intergenic 30.0%
ACTATTTGTATTCAATGGGA+AGG + chr1.4:20097160-20097179 MS.gene32947:CDS 30.0%
ATCAAAAGTGAACCTTGTTA+AGG - chr1.4:20096467-20096486 None:intergenic 30.0%
CAAAATTCTTGCTTATGATG+TGG - chr1.4:20096210-20096229 None:intergenic 30.0%
TAAAGCTCTTTCTATGATTG+AGG + chr1.4:20096570-20096589 MS.gene32947:CDS 30.0%
TAAATTCTGATTCCGATGAA+TGG + chr1.4:20096290-20096309 MS.gene32947:CDS 30.0%
TATGGACAAATAAGAAGAAC+AGG - chr1.4:20095991-20096010 None:intergenic 30.0%
TCATCGGAATCAGAATTTAA+AGG - chr1.4:20096289-20096308 None:intergenic 30.0%
TCATGTAAGTCCAAATACAA+GGG + chr1.4:20097131-20097150 MS.gene32947:CDS 30.0%
TTCATGTAAGTCCAAATACA+AGG + chr1.4:20097130-20097149 MS.gene32947:CDS 30.0%
! ATTGCAAACTTTTGCTCAAT+AGG - chr1.4:20097084-20097103 None:intergenic 30.0%
! CACATCATAAGCAAGAATTT+TGG + chr1.4:20096208-20096227 MS.gene32947:CDS 30.0%
! TCTTCTTATTTGTCCATAGT+TGG + chr1.4:20095993-20096012 MS.gene32947:CDS 30.0%
!! AATTTTGGCAACTACGAAAA+AGG + chr1.4:20096223-20096242 MS.gene32947:CDS 30.0%
!! ATTTTGGCAACTACGAAAAA+GGG + chr1.4:20096224-20096243 MS.gene32947:CDS 30.0%
!! CACTTTCTTTGAAATGAAGA+TGG + chr1.4:20097323-20097342 MS.gene32947:CDS 30.0%
!! TGCTTCACTCATTTTTCAAA+AGG + chr1.4:20096329-20096348 MS.gene32947:CDS 30.0%
!!! CATGACTGAAATTGTTTTGA+AGG - chr1.4:20096528-20096547 None:intergenic 30.0%
AAAAGAGATACTGAAAGGAG+CGG + chr1.4:20096792-20096811 MS.gene32947:CDS 35.0%
AAAGCTGATATACTTCCTAG+TGG + chr1.4:20097105-20097124 MS.gene32947:CDS 35.0%
AAGTTCATAGCTTTCAATGC+AGG + chr1.4:20097273-20097292 MS.gene32947:CDS 35.0%
AATCTATTCTTAGCGGGAAA+TGG + chr1.4:20096859-20096878 MS.gene32947:CDS 35.0%
AGTTCATAGCTTTCAATGCA+GGG + chr1.4:20097274-20097293 MS.gene32947:CDS 35.0%
ATAATCTTGACTTCCACAAC+AGG - chr1.4:20096934-20096953 None:intergenic 35.0%
ATGATGTGGTGTACATTCAT+TGG - chr1.4:20096196-20096215 None:intergenic 35.0%
ATGGATGCATGATCAAGAAA+CGG - chr1.4:20096415-20096434 None:intergenic 35.0%
ATGTTCATGATTCAGTGCAT+TGG + chr1.4:20095950-20095969 MS.gene32947:CDS 35.0%
ATTACCCTTGGAATGAAACA+TGG + chr1.4:20097417-20097436 MS.gene32947:CDS 35.0%
ATTACCTGCACTTTCCTATT+TGG + chr1.4:20096487-20096506 MS.gene32947:CDS 35.0%
GAAATGCAATCATCCCAAAT+TGG + chr1.4:20096026-20096045 MS.gene32947:CDS 35.0%
GAAGTTTCGGATACATTTAG+TGG + chr1.4:20097365-20097384 MS.gene32947:CDS 35.0%
GAGAGATGGATATCAAAAAG+CGG + chr1.4:20097225-20097244 MS.gene32947:CDS 35.0%
GTTTCTTCTCTTGACCAATT+TGG - chr1.4:20096654-20096673 None:intergenic 35.0%
TCTTTACCCAAACAACTTCT+TGG - chr1.4:20097300-20097319 None:intergenic 35.0%
TGATTCCGATGAATGGAAAA+AGG + chr1.4:20096297-20096316 MS.gene32947:CDS 35.0%
TGCACTCAATCTATTCTTAG+CGG + chr1.4:20096852-20096871 MS.gene32947:CDS 35.0%
TTTCGGATACATTTAGTGGA+AGG + chr1.4:20097369-20097388 MS.gene32947:CDS 35.0%
TTTGTATTCAATGGGAAGGA+TGG + chr1.4:20097164-20097183 MS.gene32947:CDS 35.0%
! AACTTTTGCTCAATAGGTAC+AGG - chr1.4:20097078-20097097 None:intergenic 35.0%
! CTTTTTGATATCCATCTCTC+AGG - chr1.4:20097225-20097244 None:intergenic 35.0%
! GATAAACTAGTTTACCTCCA+CGG + chr1.4:20097021-20097040 MS.gene32947:CDS 35.0%
! GCTTCTTTCCAACTTTTGTA+TGG + chr1.4:20096611-20096630 MS.gene32947:CDS 35.0%
!! ATTCCAAGTATTGGCCAATT+TGG - chr1.4:20096043-20096062 None:intergenic 35.0%
!! TCTGTTTTGCTCTTCAAGTT+TGG - chr1.4:20096728-20096747 None:intergenic 35.0%
!! TTCCAAGTATTGGCCAATTT+GGG - chr1.4:20096042-20096061 None:intergenic 35.0%
!!! ACTTTTGAAACTTTTGGAGC+TGG + chr1.4:20096262-20096281 MS.gene32947:CDS 35.0%
AAACTTCCATAGTATAGCCG+CGG - chr1.4:20097352-20097371 None:intergenic 40.0%
AAAGAGATACTGAAAGGAGC+GGG + chr1.4:20096793-20096812 MS.gene32947:CDS 40.0%
AATACTTGGAATGCTACCGT+CGG + chr1.4:20096051-20096070 MS.gene32947:CDS 40.0%
ACTTGCATGATGCCTTAACA+AGG + chr1.4:20096452-20096471 MS.gene32947:CDS 40.0%
ATAGAAAGCCTTGGAGTTAC+AGG - chr1.4:20097399-20097418 None:intergenic 40.0%
ATCCATAGTAAAAGCTCACG+TGG + chr1.4:20096429-20096448 MS.gene32947:CDS 40.0%
ATCCCAAATTGGCCAATACT+TGG + chr1.4:20096037-20096056 MS.gene32947:CDS 40.0%
CAAGCCATGTTTCATTCCAA+GGG - chr1.4:20097424-20097443 None:intergenic 40.0%
CATGATCAAGAAACGGTAGT+AGG - chr1.4:20096408-20096427 None:intergenic 40.0%
CGGCTATACTATGGAAGTTT+CGG + chr1.4:20097352-20097371 MS.gene32947:CDS 40.0%
GAAATATTATGGAGAGCCGA+CGG - chr1.4:20096070-20096089 None:intergenic 40.0%
GAGCTATATGTGAAGCCTTA+AGG + chr1.4:20097043-20097062 MS.gene32947:CDS 40.0%
GCACTCAATCTATTCTTAGC+GGG + chr1.4:20096853-20096872 MS.gene32947:CDS 40.0%
GGAAGGATGGAGAAAATATG+GGG + chr1.4:20097177-20097196 MS.gene32947:CDS 40.0%
GGGAAGGATGGAGAAAATAT+GGG + chr1.4:20097176-20097195 MS.gene32947:CDS 40.0%
TACAGGAGGATAAAGCCTTA+AGG - chr1.4:20097061-20097080 None:intergenic 40.0%
TCAAGCCATGTTTCATTCCA+AGG - chr1.4:20097425-20097444 None:intergenic 40.0%
TGCAGCTTCCATACAAAAGT+TGG - chr1.4:20096622-20096641 None:intergenic 40.0%
TGGAATGAAACATGGCTTGA+AGG + chr1.4:20097425-20097444 MS.gene32947:CDS 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.4:20097211-20097230 MS.gene32947:CDS 40.0%
TGGGAAGGATGGAGAAAATA+TGG + chr1.4:20097175-20097194 MS.gene32947:CDS 40.0%
TGTTTCATGTCATCCTGTTG+TGG + chr1.4:20096918-20096937 MS.gene32947:CDS 40.0%
! AACATCATGGTGGCACTTTT+AGG + chr1.4:20096122-20096141 MS.gene32947:CDS 40.0%
! CCTCTCCTTTTTCCATTCAT+CGG - chr1.4:20096305-20096324 None:intergenic 40.0%
! GAATCCAAATAGGAAAGTGC+AGG - chr1.4:20096494-20096513 None:intergenic 40.0%
! TTTTGCTCAATAGGTACAGG+AGG - chr1.4:20097075-20097094 None:intergenic 40.0%
AAGGTCATCCTGTAACTCCA+AGG + chr1.4:20097388-20097407 MS.gene32947:CDS 45.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.4:20097191-20097210 MS.gene32947:CDS 45.0%
ATACTGAAAGGAGCGGGAAA+AGG + chr1.4:20096799-20096818 MS.gene32947:CDS 45.0%
ATCGCTCGTAAAGATACCAG+TGG - chr1.4:20096173-20096192 None:intergenic 45.0%
ATTCAGCAGCACTAGAGAAG+TGG + chr1.4:20096747-20096766 MS.gene32947:CDS 45.0%
CAGTTAGTTCAGGTCTCAGT+TGG + chr1.4:20096884-20096903 MS.gene32947:CDS 45.0%
CCAAGGCTTTCTATTACCCT+TGG + chr1.4:20097405-20097424 MS.gene32947:CDS 45.0%
CCAAGGGTAATAGAAAGCCT+TGG - chr1.4:20097408-20097427 None:intergenic 45.0%
CCGATGAATGGAAAAAGGAG+AGG + chr1.4:20096302-20096321 MS.gene32947:CDS 45.0%
GACGGTAGCATTCCAAGTAT+TGG - chr1.4:20096052-20096071 None:intergenic 45.0%
GGAAATGGCACAGTTAGTTC+AGG + chr1.4:20096874-20096893 MS.gene32947:CDS 45.0%
GGACTTACATGAACTCCACT+AGG - chr1.4:20097123-20097142 None:intergenic 45.0%
TACTGAAAGGAGCGGGAAAA+GGG + chr1.4:20096800-20096819 MS.gene32947:CDS 45.0%
TTCTGTTGCGTCTCCAACTA+TGG - chr1.4:20096009-20096028 None:intergenic 45.0%
TTGTATGGAAGCTGCAGAAG+TGG + chr1.4:20096626-20096645 MS.gene32947:CDS 45.0%
! GTCCACGTGAGCTTTTACTA+TGG - chr1.4:20096434-20096453 None:intergenic 45.0%
!! CAGGTCTCAGTTGGTTCTTT+TGG + chr1.4:20096893-20096912 MS.gene32947:CDS 45.0%
!!! CTTTTAGGTTTGAAGGACGC+TGG + chr1.4:20096137-20096156 MS.gene32947:CDS 45.0%
!!! GGTGGCACTTTTAGGTTTGA+AGG + chr1.4:20096130-20096149 MS.gene32947:CDS 45.0%
AGGCTTCACATATAGCTCCG+TGG - chr1.4:20097041-20097060 None:intergenic 50.0%
AGTTGGAAAGAAGCCCCTGT+AGG - chr1.4:20096605-20096624 None:intergenic 50.0%
CTGCAGAAGTGGCTCCAAAT+TGG + chr1.4:20096637-20096656 MS.gene32947:CDS 50.0%
CTTCACATATAGCTCCGTGG+AGG - chr1.4:20097038-20097057 None:intergenic 50.0%
GCAGGGCCAAGAAGTTGTTT+GGG + chr1.4:20097291-20097310 MS.gene32947:CDS 50.0%
TGAAATGAAGATGGCTGCCG+CGG + chr1.4:20097332-20097351 MS.gene32947:CDS 50.0%
TGAGGAAGCAGTAGCCTACA+GGG + chr1.4:20096588-20096607 MS.gene32947:CDS 50.0%
TGCAGGGCCAAGAAGTTGTT+TGG + chr1.4:20097290-20097309 MS.gene32947:CDS 50.0%
TTGAGGAAGCAGTAGCCTAC+AGG + chr1.4:20096587-20096606 MS.gene32947:CDS 50.0%
GAGGAAGCAGTAGCCTACAG+GGG + chr1.4:20096589-20096608 MS.gene32947:CDS 55.0%
TGGCTGCCGCGGCTATACTA+TGG + chr1.4:20097343-20097362 MS.gene32947:CDS 60.0%
!! CGCTGGTTCACGAGCACCAC+TGG + chr1.4:20096154-20096173 MS.gene32947:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 20095950 20097473 20095950 ID=MS.gene32947
chr1.4 mRNA 20095950 20097473 20095950 ID=MS.gene32947.t1;Parent=MS.gene32947
chr1.4 exon 20095950 20097473 20095950 ID=MS.gene32947.t1.exon1;Parent=MS.gene32947.t1
chr1.4 CDS 20095950 20097473 20095950 ID=cds.MS.gene32947.t1;Parent=MS.gene32947.t1
Gene Sequence

>MS.gene32947

ATGTTCATGATTCAGTGCATTGGAGCATTTGTAGCAATCCTGTTCTTCTTATTTGTCCATAGTTGGAGACGCAACAGAAATGCAATCATCCCAAATTGGCCAATACTTGGAATGCTACCGTCGGCTCTCCATAATATTTCCAATCACTATGATTATATAACCTTAGTTTTAAAACATCATGGTGGCACTTTTAGGTTTGAAGGACGCTGGTTCACGAGCACCACTGGTATCTTTACGAGCGATCCAATGAATGTACACCACATCATAAGCAAGAATTTTGGCAACTACGAAAAAGGGTCTAATTTCAAAGAAACTTTTGAAACTTTTGGAGCTGGACCTTTAAATTCTGATTCCGATGAATGGAAAAAGGAGAGGACGATGCTTCACTCATTTTTCAAAAGGAAAAACTTTGAAAACTTTCTCAAACAAACAATTCAGAAGAAACTTGAGAATTTCCTACTACCGTTTCTTGATCATGCATCCATAGTAAAAGCTCACGTGGACTTGCATGATGCCTTAACAAGGTTCACTTTTGATATTACCTGCACTTTCCTATTTGGATTCGATCCAAATTGCCTTCAAAACAATTTCAGTCATGATCTCGGAGATGTCACTTATCATAAAGCTCTTTCTATGATTGAGGAAGCAGTAGCCTACAGGGGCTTCTTTCCAACTTTTGTATGGAAGCTGCAGAAGTGGCTCCAAATTGGTCAAGAGAAGAAACTCAAAGTAGCTCAAGAAAGTCTTGACAAATTCTTGCATGAATGCATAATATCCAAACTTGAAGAGCAAAACAGATTCAGCAGCACTAGAGAAGTGGAAGATTCTGACTGTGACTTGATAAAAGAGATACTGAAAGGAGCGGGAAAAGGGAAAACAAGTGAGAAGTATCTTAGAGACACTGCACTCAATCTATTCTTAGCGGGAAATGGCACAGTTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCATGTCATCCTGTTGTGGAAGTCAAGATTATTCAAGAGATGAAAGATAATTGTCTATCTGTTGATGAAAACTTGATCACTTCAATTGTGGAAAAGCTTGATAAACTAGTTTACCTCCACGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTGTACCTATTGAGCAAAAGTTTGCAATCAAAGCTGATATACTTCCTAGTGGAGTTCATGTAAGTCCAAATACAAGGGTATTATACTATTTGTATTCAATGGGAAGGATGGAGAAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCAAAAAGCGGACAAATTATACATGTACCGTCTTACAAGTTCATAGCTTTCAATGCAGGGCCAAGAAGTTGTTTGGGTAAAGACATCACTTTCTTTGAAATGAAGATGGCTGCCGCGGCTATACTATGGAAGTTTCGGATACATTTAGTGGAAGGTCATCCTGTAACTCCAAGGCTTTCTATTACCCTTGGAATGAAACATGGCTTGAAGGTCAAAGTCACTAAAAGATGCATTTGA

Protein sequence

>MS.gene32947.t1

MFMIQCIGAFVAILFFLFVHSWRRNRNAIIPNWPILGMLPSALHNISNHYDYITLVLKHHGGTFRFEGRWFTSTTGIFTSDPMNVHHIISKNFGNYEKGSNFKETFETFGAGPLNSDSDEWKKERTMLHSFFKRKNFENFLKQTIQKKLENFLLPFLDHASIVKAHVDLHDALTRFTFDITCTFLFGFDPNCLQNNFSHDLGDVTYHKALSMIEEAVAYRGFFPTFVWKLQKWLQIGQEKKLKVAQESLDKFLHECIISKLEEQNRFSSTREVEDSDCDLIKEILKGAGKGKTSEKYLRDTALNLFLAGNGTVSSGLSWFFWLVSCHPVVEVKIIQEMKDNCLSVDENLITSIVEKLDKLVYLHGAICEALRLYPPVPIEQKFAIKADILPSGVHVSPNTRVLYYLYSMGRMEKIWGEDCMEFKPERWISKSGQIIHVPSYKFIAFNAGPRSCLGKDITFFEMKMAAAAILWKFRIHLVEGHPVTPRLSITLGMKHGLKVKVTKRCI