AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044589


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044589.t1 MTR_7g033570 94.758 496 26 0 1 496 1 496 0.0 978
MS.gene044589.t1 MTR_7g033580 84.879 496 75 0 1 496 1 496 0.0 889
MS.gene044589.t1 MTR_8g088470 79.381 485 99 1 12 495 8 492 0.0 814
MS.gene044589.t1 MTR_1g035670 53.320 497 220 5 10 496 10 504 0.0 562
MS.gene044589.t1 MTR_6g004670 56.073 494 208 4 9 494 13 505 0.0 556
MS.gene044589.t1 MTR_6g004630 54.251 494 218 4 10 496 13 505 0.0 546
MS.gene044589.t1 MTR_1g036130 51.406 498 228 5 12 496 12 508 0.0 544
MS.gene044589.t1 MTR_6g004590 53.187 502 216 5 13 496 17 517 0.0 542
MS.gene044589.t1 MTR_1g036200 52.590 502 229 6 3 496 1 501 0.0 539
MS.gene044589.t1 MTR_1g035790 52.174 506 230 7 1 496 1 504 0.0 539
MS.gene044589.t1 MTR_6g004600 52.475 505 221 4 10 496 14 517 0.0 538
MS.gene044589.t1 MTR_1g035750 51.081 509 234 3 1 496 1 507 0.0 536
MS.gene044589.t1 MTR_1g035760 51.724 493 207 7 12 496 12 481 0.0 532
MS.gene044589.t1 MTR_1g035830 50.598 502 231 6 10 496 10 509 0.0 526
MS.gene044589.t1 MTR_1g036010 50.398 502 232 6 10 496 10 509 0.0 524
MS.gene044589.t1 MTR_1g035800 51.562 512 230 6 1 494 1 512 0.0 523
MS.gene044589.t1 MTR_6g004610 55.292 463 199 4 38 493 1 462 0.0 523
MS.gene044589.t1 MTR_1g050362 51.889 503 222 8 9 494 7 506 0.0 521
MS.gene044589.t1 MTR_1g035580 50.996 502 219 6 10 496 9 498 5.31e-180 514
MS.gene044589.t1 MTR_1g036270 50.000 514 238 6 1 496 1 513 2.77e-177 508
MS.gene044589.t1 MTR_1g035940 48.303 501 244 5 10 496 10 509 3.14e-174 500
MS.gene044589.t1 MTR_1g035860 46.804 438 221 5 9 436 15 450 7.33e-147 430
MS.gene044589.t1 MTR_1g069715 51.106 407 182 6 84 475 2 406 1.47e-145 432
MS.gene044589.t1 MTR_1g037550 39.676 494 279 5 20 494 54 547 1.78e-133 398
MS.gene044589.t1 MTR_1g037560 41.273 487 271 5 23 494 57 543 1.85e-133 397
MS.gene044589.t1 MTR_4g012320 79.111 225 47 0 272 496 1 225 1.95e-130 377
MS.gene044589.t1 MTR_4g075110 38.889 504 292 6 6 494 47 549 2.55e-130 390
MS.gene044589.t1 MTR_8g030590 40.619 485 262 10 33 496 33 512 1.42e-118 359
MS.gene044589.t1 MTR_5g070010 39.375 480 272 7 33 496 34 510 3.78e-116 352
MS.gene044589.t1 MTR_8g098435 39.792 480 268 9 33 496 33 507 2.21e-113 345
MS.gene044589.t1 MTR_3g463060 37.448 478 273 7 33 496 39 504 7.16e-105 323
MS.gene044589.t1 MTR_4g119660 33.588 524 305 13 5 495 3 516 1.40e-86 275
MS.gene044589.t1 MTR_5g019140 33.588 524 305 12 5 495 18 531 1.51e-86 276
MS.gene044589.t1 MTR_1g060550 39.098 399 225 9 77 467 93 481 4.95e-85 271
MS.gene044589.t1 MTR_3g080580 33.534 498 299 11 19 494 30 517 5.65e-85 272
MS.gene044589.t1 MTR_7g029275 32.939 507 304 10 9 494 17 508 5.04e-83 266
MS.gene044589.t1 MTR_7g096340 32.489 474 295 11 33 494 42 502 1.16e-82 265
MS.gene044589.t1 MTR_1g070365 33.264 484 300 11 23 494 32 504 1.23e-82 265
MS.gene044589.t1 MTR_1g070345 33.333 486 291 13 27 495 36 505 4.14e-82 264
MS.gene044589.t1 MTR_2g086040 34.906 424 257 8 74 491 85 495 1.72e-81 262
MS.gene044589.t1 MTR_8g035860 34.310 478 289 13 34 495 42 510 1.79e-81 262
MS.gene044589.t1 MTR_7g088330 34.127 504 296 15 13 494 19 508 2.80e-81 261
MS.gene044589.t1 MTR_8g035780 34.255 470 284 11 34 487 43 503 3.98e-80 259
MS.gene044589.t1 MTR_7g096320 32.347 473 297 10 33 494 43 503 5.58e-80 258
MS.gene044589.t1 MTR_4g054920 34.862 436 254 10 79 495 93 517 3.22e-79 256
MS.gene044589.t1 MTR_8g035820 34.624 439 266 11 73 495 77 510 7.86e-79 255
MS.gene044589.t1 MTR_8g035810 32.569 436 267 10 79 495 84 511 2.66e-76 248
MS.gene044589.t1 MTR_7g406990 38.462 351 204 6 30 369 47 396 8.11e-76 245
MS.gene044589.t1 MTR_1g102220 31.120 482 295 12 34 495 43 507 2.45e-73 241
MS.gene044589.t1 MTR_8g035680 28.931 477 300 12 34 489 49 507 1.52e-68 228
MS.gene044589.t1 MTR_8g035760 28.541 473 306 13 34 489 49 506 2.90e-66 222
MS.gene044589.t1 MTR_8g035810 32.447 376 228 9 79 436 84 451 8.96e-63 211
MS.gene044589.t1 MTR_8g035680 28.571 350 223 7 157 489 21 360 5.81e-52 180
MS.gene044589.t1 MTR_6g084040 44.253 174 78 2 10 182 10 165 3.33e-44 154
MS.gene044589.t1 MTR_1g102210 29.630 351 199 10 155 490 40 357 9.80e-42 153
MS.gene044589.t1 MTR_8g035810 30.065 306 191 7 79 367 84 383 5.48e-39 146
MS.gene044589.t1 MTR_1g070370 33.865 251 147 6 168 412 5 242 5.79e-39 142
MS.gene044589.t1 MTR_7g079440 27.352 457 282 20 61 494 219 648 2.27e-35 140
MS.gene044589.t1 MTR_1g062190 25.346 434 296 13 75 494 120 539 2.22e-30 124
MS.gene044589.t1 MTR_5g009110 25.319 470 285 17 77 495 117 571 4.28e-30 124
MS.gene044589.t1 MTR_7g079440 28.191 376 226 16 61 417 219 569 6.28e-28 117
MS.gene044589.t1 MTR_5g009110 24.714 437 265 15 109 495 1 423 1.77e-27 114
MS.gene044589.t1 MTR_2g062670 35.602 191 116 4 148 337 49 233 3.59e-25 108
MS.gene044589.t1 MTR_2g062670 30.526 190 88 5 148 337 265 410 2.35e-17 85.1
MS.gene044589.t1 MTR_2g072270 24.190 463 267 20 63 489 104 518 3.89e-25 108
MS.gene044589.t1 MTR_1g050590 43.590 117 60 2 246 357 3 118 5.14e-25 100
MS.gene044589.t1 MTR_8g046580 48.039 102 50 2 369 469 193 292 9.99e-25 104
MS.gene044589.t1 MTR_1g101040 29.434 265 172 7 229 487 253 508 7.76e-24 105
MS.gene044589.t1 MTR_1g040110 38.583 127 75 1 109 232 41 167 1.37e-23 97.8
MS.gene044589.t1 MTR_6g072490 28.409 264 176 7 229 487 251 506 7.40e-23 102
MS.gene044589.t1 MTR_1g101050 28.030 264 177 7 229 487 249 504 1.39e-22 101
MS.gene044589.t1 MTR_3g093530 22.611 429 297 12 79 493 116 523 1.70e-22 100
MS.gene044589.t1 MTR_4g113650 22.965 479 319 13 39 496 72 521 1.88e-22 100
MS.gene044589.t1 MTR_7g006900 26.840 231 150 5 266 492 255 470 4.59e-22 99.4
MS.gene044589.t1 MTR_6g017325 24.235 392 266 13 109 492 137 505 2.72e-21 97.1
MS.gene044589.t1 MTR_8g042000 23.195 457 298 15 58 493 99 523 7.87e-21 95.9
MS.gene044589.t1 MTR_1g085680 22.687 454 297 15 61 492 93 514 8.33e-21 95.9
MS.gene044589.t1 MTR_2g072400 23.129 441 299 14 70 493 98 515 1.61e-20 94.7
MS.gene044589.t1 MTR_0025s0110 22.689 476 306 17 38 487 80 519 2.26e-20 94.4
MS.gene044589.t1 MTR_7g079440 28.322 286 168 13 61 327 219 486 2.60e-20 94.0
MS.gene044589.t1 MTR_7g055793 22.687 454 303 14 58 493 45 468 3.11e-20 93.6
MS.gene044589.t1 MTR_7g055793 22.687 454 303 14 58 493 100 523 3.13e-20 94.0
MS.gene044589.t1 MTR_3g014880 22.263 539 334 21 10 494 16 523 5.20e-20 93.6
MS.gene044589.t1 MTR_7g098550 23.356 441 299 11 61 495 91 498 7.38e-20 92.8
MS.gene044589.t1 MTR_0147s0030 22.788 452 303 14 59 493 108 530 1.09e-19 92.4
MS.gene044589.t1 MTR_6g008620 25.000 460 274 19 25 442 38 468 1.64e-19 92.0
MS.gene044589.t1 MTR_6g008500 24.847 326 212 9 160 465 189 501 1.77e-19 91.7
MS.gene044589.t1 MTR_7g098550 22.902 441 309 10 61 495 91 506 2.15e-19 91.3
MS.gene044589.t1 MTR_8g008530 22.410 415 256 12 108 493 141 518 3.44e-19 90.9
MS.gene044589.t1 MTR_5g095230 22.947 475 307 19 38 493 79 513 3.66e-19 90.9
MS.gene044589.t1 MTR_2g055430 22.422 446 295 16 70 493 101 517 4.06e-19 90.5
MS.gene044589.t1 MTR_5g009110 26.866 335 208 13 77 388 117 437 5.03e-19 90.1
MS.gene044589.t1 MTR_2g072340 22.366 465 318 16 46 493 77 515 5.23e-19 90.1
MS.gene044589.t1 MTR_8g042020 22.462 463 293 14 58 493 99 522 1.12e-18 89.4
MS.gene044589.t1 MTR_6g022450 24.781 343 227 10 163 493 175 498 1.57e-18 89.0
MS.gene044589.t1 MTR_2g010250 27.174 276 177 8 236 494 237 505 1.88e-18 88.6
MS.gene044589.t1 MTR_1g015860 27.586 261 177 6 241 495 275 529 2.10e-18 88.6
MS.gene044589.t1 MTR_6g008600 27.003 337 197 13 134 449 167 475 2.47e-18 88.2
MS.gene044589.t1 MTR_1g069200 21.475 461 321 15 42 487 71 505 2.55e-18 88.2
MS.gene044589.t1 MTR_6g008650 23.031 508 323 22 10 473 16 499 2.99e-18 87.8
MS.gene044589.t1 MTR_6g008530 27.350 234 152 7 242 465 270 495 5.72e-18 87.0
MS.gene044589.t1 MTR_2g055470 20.899 445 303 15 70 493 101 517 6.42e-18 87.0
MS.gene044589.t1 MTR_2g023680 24.079 407 271 13 104 493 132 517 9.10e-18 86.3
MS.gene044589.t1 MTR_6g042540 22.880 507 330 18 5 473 9 492 1.15e-17 86.3
MS.gene044589.t1 MTR_6g042610 23.256 473 311 17 33 473 41 493 1.73e-17 85.5
MS.gene044589.t1 MTR_1g036140 42.000 100 52 2 247 341 68 166 1.94e-17 80.1
MS.gene044589.t1 MTR_1g036140 37.113 97 53 4 10 99 10 105 1.95e-12 65.9
MS.gene044589.t1 MTR_8g104030 23.750 240 165 5 233 460 8 241 2.31e-17 82.8
MS.gene044589.t1 MTR_8g035790 41.414 99 54 3 398 494 1 97 2.82e-17 77.8
MS.gene044589.t1 MTR_8g036185 24.848 330 218 9 163 470 168 489 3.05e-17 84.7
MS.gene044589.t1 MTR_7g012860 26.496 234 154 7 235 462 241 462 3.30e-17 84.7
MS.gene044589.t1 MTR_0287s0060 26.496 234 154 7 235 462 241 462 3.30e-17 84.7
MS.gene044589.t1 MTR_2g072250 22.500 440 302 14 70 493 97 513 3.75e-17 84.3
MS.gene044589.t1 MTR_8g098565 29.213 178 122 3 295 469 302 478 6.02e-17 84.0
MS.gene044589.t1 MTR_8g042060 22.151 465 314 15 48 493 88 523 6.33e-17 84.0
MS.gene044589.t1 MTR_3g104560 27.969 261 164 9 245 495 156 402 1.18e-16 82.4
MS.gene044589.t1 MTR_8g042060 26.733 202 131 4 297 493 298 487 1.39e-16 82.8
MS.gene044589.t1 MTR_5g070920 26.293 232 157 5 233 455 233 459 1.51e-16 82.8
MS.gene044589.t1 MTR_5g034900 27.315 216 152 4 282 494 304 517 1.64e-16 82.4
MS.gene044589.t1 MTR_3g104560 27.969 261 164 9 245 495 291 537 1.84e-16 82.4
MS.gene044589.t1 MTR_4g104610 22.703 370 240 10 144 487 142 491 1.98e-16 82.0
MS.gene044589.t1 MTR_8g076290 26.852 216 138 7 242 444 242 450 2.19e-16 82.0
MS.gene044589.t1 MTR_5g009110 26.159 302 188 11 109 388 1 289 2.76e-16 80.1
MS.gene044589.t1 MTR_7g103450 30.350 257 157 12 242 493 267 506 3.10e-16 81.6
MS.gene044589.t1 MTR_2g010290 25.283 265 180 7 236 494 280 532 3.31e-16 81.6
MS.gene044589.t1 MTR_2g061750 28.962 183 105 7 74 237 12 188 3.56e-16 77.8
MS.gene044589.t1 MTR_6g008640 22.334 497 303 18 25 473 36 497 4.05e-16 81.3
MS.gene044589.t1 MTR_2g061740 28.962 183 105 7 74 237 12 188 4.07e-16 77.4
MS.gene044589.t1 MTR_8g012585 21.519 395 278 10 121 494 66 449 4.19e-16 80.9
MS.gene044589.t1 MTR_8g469360 22.844 429 282 14 85 493 24 423 6.02e-16 80.1
MS.gene044589.t1 MTR_8g104100 23.558 208 146 4 260 460 21 222 6.59e-16 78.2
MS.gene044589.t1 MTR_2g062680 32.353 136 61 2 286 420 32 137 8.54e-16 76.3
MS.gene044589.t1 MTR_2g072380 27.638 199 133 4 297 493 161 350 9.56e-16 79.0
MS.gene044589.t1 MTR_2g072310 27.136 199 134 4 297 493 161 350 1.26e-15 78.6
MS.gene044589.t1 MTR_0181s0030 23.409 440 304 17 25 449 31 452 1.35e-15 79.7
MS.gene044589.t1 MTR_6g004570 43.519 108 39 4 243 332 6 109 1.68e-15 76.6
MS.gene044589.t1 MTR_8g042040 22.222 459 283 15 58 493 99 506 1.70e-15 79.3
MS.gene044589.t1 MTR_2g072380 27.638 199 133 4 297 493 301 490 1.75e-15 79.3
MS.gene044589.t1 MTR_1g022040 22.581 434 300 14 70 493 95 502 2.10e-15 79.0
MS.gene044589.t1 MTR_2g010320 24.104 307 209 10 203 494 206 503 2.38e-15 79.0
MS.gene044589.t1 MTR_2g010330 28.249 177 124 3 295 469 305 480 4.18e-15 78.2
MS.gene044589.t1 MTR_0171s0030 26.357 258 171 7 222 467 138 388 4.62e-15 77.4
MS.gene044589.t1 MTR_5g070710 24.308 325 214 10 145 455 151 457 6.02e-15 77.8
MS.gene044589.t1 MTR_5g070690 25.108 231 158 4 240 460 238 463 6.21e-15 77.4
MS.gene044589.t1 MTR_5g070800 25.108 231 158 4 240 460 238 463 6.21e-15 77.4
MS.gene044589.t1 MTR_6g008430 29.940 167 109 4 284 449 307 466 8.24e-15 77.4
MS.gene044589.t1 MTR_7g012330 24.786 234 157 7 242 469 249 469 8.55e-15 77.0
MS.gene044589.t1 MTR_2g010280 26.050 238 164 5 236 463 235 470 1.07e-14 76.6
MS.gene044589.t1 MTR_6g084770 25.726 241 159 7 233 460 233 466 1.19e-14 76.6
MS.gene044589.t1 MTR_5g091760 23.032 343 228 11 143 481 150 460 3.05e-14 75.5
MS.gene044589.t1 MTR_2g010380 22.951 244 176 5 236 469 241 482 3.32e-14 75.5
MS.gene044589.t1 MTR_4g104540 29.448 163 109 3 282 444 220 376 3.38e-14 75.1
MS.gene044589.t1 MTR_5g070830 25.126 199 140 3 266 460 382 575 3.85e-14 75.5
MS.gene044589.t1 MTR_1g091003 24.771 218 156 5 245 462 248 457 4.20e-14 74.7
MS.gene044589.t1 MTR_4g104570 30.464 151 99 3 294 444 1 145 5.57e-14 71.2
MS.gene044589.t1 MTR_4g094775 23.932 234 162 6 240 473 250 467 6.42e-14 74.3
MS.gene044589.t1 MTR_1g091023 24.545 220 154 6 245 462 248 457 6.91e-14 74.3
MS.gene044589.t1 MTR_4g088420 26.374 182 126 4 294 473 31 206 9.42e-14 71.2
MS.gene044589.t1 MTR_0171s0010 27.354 223 142 8 254 469 266 475 9.96e-14 73.9
MS.gene044589.t1 MTR_1g091010 24.312 218 157 5 245 462 247 456 1.38e-13 73.2
MS.gene044589.t1 MTR_8g063280 26.131 199 139 4 267 463 272 464 1.59e-13 73.2
MS.gene044589.t1 MTR_2g072260 20.833 432 299 14 80 493 104 510 1.60e-13 73.2
MS.gene044589.t1 MTR_5g026520 25.561 223 155 6 277 494 292 508 1.96e-13 72.8
MS.gene044589.t1 MTR_8g089800 26.749 243 161 7 239 473 237 470 2.16e-13 72.8
MS.gene044589.t1 MTR_2g072420 30.070 143 94 3 356 496 5 143 2.39e-13 67.8
MS.gene044589.t1 MTR_4g031820 22.018 436 287 15 70 493 111 505 2.51e-13 72.4
MS.gene044589.t1 MTR_6g084900 22.944 231 163 5 240 460 3 228 3.13e-13 70.5
MS.gene044589.t1 MTR_7g075610 28.155 206 128 6 266 463 274 467 3.35e-13 72.0
MS.gene044589.t1 MTR_5g010750 21.022 509 348 19 1 494 1 470 3.60e-13 72.0
MS.gene044589.t1 MTR_3g436390 26.522 230 154 8 232 455 238 458 3.77e-13 72.0
MS.gene044589.t1 MTR_4g088195 21.925 374 246 14 121 471 128 478 3.91e-13 72.0
MS.gene044589.t1 MTR_2g061200 20.131 457 305 12 64 493 105 528 4.46e-13 72.0
MS.gene044589.t1 MTR_4g031820 22.870 446 293 17 70 493 111 527 5.02e-13 71.6
MS.gene044589.t1 MTR_4g077210 25.229 218 154 4 233 448 241 451 5.75e-13 71.2
MS.gene044589.t1 MTR_8g012970 25.778 225 157 4 257 480 258 473 5.84e-13 71.2
MS.gene044589.t1 MTR_5g470730 25.090 279 178 7 157 420 164 426 5.95e-13 70.9
MS.gene044589.t1 MTR_4g078110 27.513 189 130 4 257 444 240 422 7.29e-13 70.9
MS.gene044589.t1 MTR_5g007460 23.077 234 151 4 230 463 236 440 7.96e-13 70.9
MS.gene044589.t1 MTR_5g010750 21.503 479 324 18 1 464 1 442 9.47e-13 70.5
MS.gene044589.t1 MTR_0022s0290 24.000 225 153 7 242 455 255 472 1.05e-12 70.5
MS.gene044589.t1 MTR_5g070700 23.009 226 159 4 240 455 240 460 1.26e-12 70.5
MS.gene044589.t1 MTR_2g010300 25.490 204 133 5 295 494 301 489 1.56e-12 70.1
MS.gene044589.t1 MTR_4g104550 22.082 317 212 11 143 444 141 437 1.76e-12 69.7
MS.gene044589.t1 MTR_4g088400 25.610 246 171 6 233 473 256 494 1.82e-12 69.7
MS.gene044589.t1 MTR_5g019010 22.807 456 295 17 32 461 40 464 2.12e-12 69.7
MS.gene044589.t1 MTR_7g056103 21.369 482 324 19 6 460 16 469 2.26e-12 69.7
MS.gene044589.t1 MTR_4g026200 22.511 231 170 7 235 463 237 460 2.34e-12 69.3
MS.gene044589.t1 MTR_3g076530 24.138 232 153 8 240 463 251 467 2.64e-12 69.3
MS.gene044589.t1 MTR_1g031700 25.616 203 131 7 266 462 271 459 2.88e-12 69.3
MS.gene044589.t1 MTR_5g056720 23.506 251 166 6 244 489 191 420 2.96e-12 68.9
MS.gene044589.t1 MTR_1750s0010 25.658 152 107 3 293 444 1 146 3.25e-12 65.1
MS.gene044589.t1 MTR_5g018500 24.074 162 116 4 306 465 4 160 4.28e-12 65.5
MS.gene044589.t1 MTR_5g070850 21.727 359 249 12 110 454 119 459 5.62e-12 68.2
MS.gene044589.t1 MTR_1g107295 21.569 255 168 6 227 460 232 475 8.53e-12 67.8
MS.gene044589.t1 MTR_1g107300 23.000 200 130 5 300 494 9 189 8.57e-12 65.1
MS.gene044589.t1 MTR_3g025260 22.957 257 179 8 220 466 228 475 1.16e-11 67.4
MS.gene044589.t1 MTR_4g088170 22.133 375 246 14 121 471 128 480 1.35e-11 67.0
MS.gene044589.t1 MTR_3g057980 25.402 311 172 18 160 444 165 441 1.40e-11 67.0
MS.gene044589.t1 MTR_4g088160 20.755 371 246 14 121 467 128 474 1.59e-11 67.0
MS.gene044589.t1 MTR_1g031710 26.590 173 112 5 253 420 67 229 1.83e-11 65.5
MS.gene044589.t1 MTR_7g075540 27.053 207 128 8 266 463 272 464 1.86e-11 66.6
MS.gene044589.t1 MTR_5g007450 23.109 238 144 6 230 463 259 461 2.06e-11 66.6
MS.gene044589.t1 MTR_4g088425 27.755 245 161 8 233 470 239 474 2.25e-11 66.2
MS.gene044589.t1 MTR_4g088405 28.125 192 130 4 284 473 223 408 3.15e-11 65.9
MS.gene044589.t1 MTR_5g070840 26.619 139 97 2 324 460 1 136 3.27e-11 62.4
MS.gene044589.t1 MTR_4g109470 22.594 239 170 5 233 463 236 467 3.40e-11 65.9
MS.gene044589.t1 MTR_1g103670 25.405 185 119 6 266 444 271 442 3.45e-11 65.9
MS.gene044589.t1 MTR_2g450040 26.016 246 162 10 228 462 242 478 4.16e-11 65.5
MS.gene044589.t1 MTR_5g095260 23.099 355 238 14 121 463 134 465 4.29e-11 65.5
MS.gene044589.t1 MTR_4g062500 21.552 232 163 8 242 460 248 473 4.76e-11 65.5
MS.gene044589.t1 MTR_8g469300 22.650 234 163 7 222 444 226 452 5.11e-11 65.5
MS.gene044589.t1 MTR_3g076550 24.274 379 241 15 121 487 128 472 6.72e-11 64.7
MS.gene044589.t1 MTR_1g023730 23.789 227 157 7 242 463 260 475 8.03e-11 64.7
MS.gene044589.t1 MTR_5g073230 21.488 242 168 7 233 463 223 453 8.70e-11 64.7
MS.gene044589.t1 MTR_5g007550 22.689 238 145 6 230 463 259 461 9.83e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044589.t1 AT2G23180 44.747 514 264 4 1 495 1 513 2.81e-159 462
MS.gene044589.t1 AT4G39490 43.822 518 269 4 1 496 1 518 1.64e-158 460
MS.gene044589.t1 AT2G21910 46.771 511 254 7 1 496 1 508 1.90e-153 447
MS.gene044589.t1 AT4G39500 44.444 504 250 6 12 494 22 516 3.48e-150 439
MS.gene044589.t1 AT4G39480 44.773 507 264 3 6 496 9 515 5.37e-148 433
MS.gene044589.t1 AT1G57750 42.262 504 271 4 1 494 3 496 4.51e-147 430
MS.gene044589.t1 AT4G39500 45.106 470 241 4 38 494 1 466 7.88e-145 424
MS.gene044589.t1 AT1G65340 43.478 506 264 4 3 493 4 502 1.10e-144 424
MS.gene044589.t1 AT4G32170 42.829 516 260 7 1 494 1 503 7.92e-144 422
MS.gene044589.t1 AT5G52320 44.239 486 250 5 22 493 23 501 2.35e-143 421
MS.gene044589.t1 AT1G47620 43.841 479 245 4 33 494 44 515 7.38e-143 421
MS.gene044589.t1 AT4G39510 42.685 499 259 4 14 494 16 505 1.73e-142 419
MS.gene044589.t1 AT5G52320 44.283 481 247 5 22 488 23 496 7.66e-142 417
MS.gene044589.t1 AT5G08250 39.489 509 285 8 6 496 39 542 1.16e-129 388
MS.gene044589.t1 AT5G23190 38.340 506 296 5 6 496 38 542 2.20e-129 387
MS.gene044589.t1 AT5G02900 42.063 504 235 9 12 494 12 479 6.44e-128 381
MS.gene044589.t1 AT5G08250 39.834 482 267 8 33 496 4 480 5.81e-125 374
MS.gene044589.t1 AT3G26125 38.911 496 276 8 25 496 42 534 3.16e-116 353
MS.gene044589.t1 AT1G63710 39.004 482 271 9 33 496 33 509 1.03e-114 348
MS.gene044589.t1 AT1G01600 38.552 511 284 11 13 496 8 515 6.36e-114 347
MS.gene044589.t1 AT1G57750 40.278 432 238 4 1 422 3 424 1.36e-113 343
MS.gene044589.t1 AT2G45970 39.175 485 269 9 33 496 33 512 3.63e-113 345
MS.gene044589.t1 AT1G13150 38.966 503 278 13 15 496 25 519 1.08e-111 341
MS.gene044589.t1 AT5G58860 38.755 498 287 8 12 494 14 508 1.19e-111 340
MS.gene044589.t1 AT4G00360 38.310 509 286 10 13 496 8 513 3.61e-111 340
MS.gene044589.t1 AT1G13140 38.398 487 272 11 31 496 47 526 3.80e-111 340
MS.gene044589.t1 AT1G24540 37.605 476 282 5 33 494 46 520 5.10e-111 339
MS.gene044589.t1 AT1G13140 37.448 478 263 10 31 496 47 500 4.75e-108 331
MS.gene044589.t1 AT3G56630 35.967 481 275 15 33 495 34 499 1.80e-87 277
MS.gene044589.t1 AT1G34540 34.937 478 283 14 33 495 34 498 7.90e-86 273
MS.gene044589.t1 AT2G27690 36.806 432 254 8 74 495 73 495 3.72e-85 271
MS.gene044589.t1 AT1G69500 31.740 523 308 12 13 495 11 524 4.30e-83 267
MS.gene044589.t1 AT2G45510 34.755 469 282 12 34 487 42 501 1.85e-82 265
MS.gene044589.t1 AT3G48520 34.467 441 261 9 69 495 74 500 4.14e-80 258
MS.gene044589.t1 AT2G44890 33.684 475 279 16 34 487 42 501 2.60e-79 256
MS.gene044589.t1 AT5G63450 34.180 433 256 11 77 494 84 502 5.89e-76 248
MS.gene044589.t1 AT2G44890 32.553 470 273 14 34 487 42 483 1.71e-75 246
MS.gene044589.t1 AT5G63450 34.180 433 256 11 77 494 142 560 3.09e-75 247
MS.gene044589.t1 AT3G01900 31.315 479 303 11 26 494 28 490 5.66e-71 234
MS.gene044589.t1 AT1G31800 26.932 453 291 18 61 495 140 570 8.79e-35 137
MS.gene044589.t1 AT3G53130 26.606 436 288 16 75 494 120 539 7.80e-32 129
MS.gene044589.t1 AT2G46950 23.556 450 299 14 59 492 148 568 4.18e-26 112
MS.gene044589.t1 AT2G26710 24.053 449 295 13 61 493 96 514 5.55e-26 111
MS.gene044589.t1 AT5G52400 24.099 444 303 14 58 492 99 517 5.30e-22 99.4
MS.gene044589.t1 AT2G46960 22.944 462 295 16 57 492 89 515 1.39e-21 98.2
MS.gene044589.t1 AT4G27710 24.945 457 288 21 57 491 91 514 1.45e-21 98.2
MS.gene044589.t1 AT5G24900 23.310 429 290 15 82 491 116 524 6.60e-21 96.3
MS.gene044589.t1 AT5G24900 23.239 426 288 15 85 491 2 407 1.88e-20 94.0
MS.gene044589.t1 AT1G66030 30.588 170 100 3 1 159 1 163 1.97e-20 89.0
MS.gene044589.t1 AT5G51900 38.806 134 67 2 216 334 3 136 2.60e-20 90.5
MS.gene044589.t1 AT4G13310 26.554 354 227 12 124 467 137 467 4.25e-20 93.6
MS.gene044589.t1 AT3G14660 22.467 454 304 17 57 493 89 511 3.84e-19 90.9
MS.gene044589.t1 AT4G13290 27.742 310 194 9 167 467 172 460 4.10e-19 90.5
MS.gene044589.t1 AT3G48300 26.829 328 221 11 167 489 164 477 5.21e-19 90.1
MS.gene044589.t1 AT3G48300 26.829 328 221 11 167 489 166 479 5.26e-19 90.1
MS.gene044589.t1 AT5G24910 21.429 476 317 17 46 494 87 532 5.34e-19 90.5
MS.gene044589.t1 AT3G14640 22.271 458 302 16 57 493 111 535 6.24e-19 90.1
MS.gene044589.t1 AT3G14640 22.271 458 302 16 57 493 89 513 7.01e-19 89.7
MS.gene044589.t1 AT3G14630 23.656 465 307 17 46 493 74 507 7.17e-19 89.7
MS.gene044589.t1 AT3G14680 23.568 454 299 18 57 493 89 511 9.61e-19 89.4
MS.gene044589.t1 AT3G14630 23.656 465 307 17 46 493 129 562 1.17e-18 89.4
MS.gene044589.t1 AT3G14650 22.687 454 303 18 57 493 89 511 1.30e-18 89.0
MS.gene044589.t1 AT3G61040 28.302 212 145 5 253 463 255 460 1.33e-18 89.0
MS.gene044589.t1 AT2G27000 24.679 389 268 12 121 496 132 508 1.77e-18 88.6
MS.gene044589.t1 AT3G25180 22.115 416 289 10 76 473 85 483 1.79e-18 88.6
MS.gene044589.t1 AT3G14620 23.673 452 288 16 56 486 92 507 8.89e-18 86.7
MS.gene044589.t1 AT1G64940 22.878 271 197 4 227 489 237 503 5.29e-17 84.0
MS.gene044589.t1 AT2G46960 23.837 344 219 11 165 492 83 399 7.31e-17 82.8
MS.gene044589.t1 AT4G15350 23.858 394 265 15 121 496 128 504 1.44e-16 82.8
MS.gene044589.t1 AT3G14660 26.493 268 172 9 236 493 113 365 1.59e-16 81.6
MS.gene044589.t1 AT3G14690 21.315 441 302 15 70 493 99 511 2.23e-16 82.0
MS.gene044589.t1 AT3G14690 21.315 441 302 15 70 493 134 546 2.44e-16 82.0
MS.gene044589.t1 AT4G37340 25.000 288 196 8 165 448 169 440 3.33e-16 81.6
MS.gene044589.t1 AT3G20140 24.857 350 233 12 152 488 166 498 6.75e-16 80.5
MS.gene044589.t1 AT3G20940 27.477 222 147 6 240 455 255 468 7.31e-16 80.5
MS.gene044589.t1 AT1G64950 24.771 218 158 3 274 489 289 502 2.16e-15 79.0
MS.gene044589.t1 AT3G48270 26.950 282 184 12 167 442 166 431 2.61e-15 78.6
MS.gene044589.t1 AT3G20935 27.619 210 138 6 294 496 134 336 4.27e-15 77.0
MS.gene044589.t1 AT5G38450 22.469 405 263 11 109 492 140 514 4.96e-15 77.8
MS.gene044589.t1 AT2G45580 26.050 238 152 8 235 463 96 318 6.13e-15 76.6
MS.gene044589.t1 AT3G20110 25.075 335 232 9 121 450 132 452 6.34e-15 77.8
MS.gene044589.t1 AT2G45580 26.050 238 152 8 235 463 250 472 1.12e-14 77.0
MS.gene044589.t1 AT5G06900 25.108 231 158 7 240 467 247 465 2.14e-14 75.9
MS.gene044589.t1 AT4G15360 23.907 343 232 13 121 450 133 459 7.59e-14 74.3
MS.gene044589.t1 AT4G37410 23.511 319 224 9 145 459 147 449 9.49e-14 73.9
MS.gene044589.t1 AT5G35715 23.810 420 245 16 71 460 23 397 1.10e-13 73.6
MS.gene044589.t1 AT3G48310 25.373 335 215 15 163 482 163 477 1.46e-13 73.2
MS.gene044589.t1 AT1G01190 26.699 206 135 7 298 494 338 536 2.15e-13 72.8
MS.gene044589.t1 AT1G01190 26.699 206 135 7 298 494 333 531 2.35e-13 72.8
MS.gene044589.t1 AT1G50520 23.324 343 235 14 121 450 138 465 2.53e-13 72.8
MS.gene044589.t1 AT4G13770 22.944 231 173 4 238 467 241 467 2.65e-13 72.4
MS.gene044589.t1 AT1G75130 22.297 444 289 15 61 486 90 495 3.16e-13 72.4
MS.gene044589.t1 AT2G12190 23.636 220 160 4 274 489 289 504 3.87e-13 72.0
MS.gene044589.t1 AT1G66540 24.080 299 197 10 159 448 50 327 4.32e-13 71.2
MS.gene044589.t1 AT3G48280 23.944 284 189 8 168 442 166 431 4.66e-13 71.6
MS.gene044589.t1 AT3G26270 24.691 243 161 7 233 465 240 470 5.97e-13 71.2
MS.gene044589.t1 AT1G67110 24.889 225 150 4 273 492 298 508 8.78e-13 70.9
MS.gene044589.t1 AT1G64930 25.110 227 161 6 274 495 288 510 1.46e-12 70.1
MS.gene044589.t1 AT5G47990 22.368 304 216 9 155 449 169 461 1.47e-12 70.1
MS.gene044589.t1 AT3G03470 23.256 258 174 5 244 494 269 509 2.35e-12 69.7
MS.gene044589.t1 AT2G26170 24.803 254 172 7 251 494 194 438 2.56e-12 69.3
MS.gene044589.t1 AT2G26170 24.803 254 172 7 251 494 277 521 2.65e-12 69.3
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 33 374 3.03e-12 68.6
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 33 374 3.03e-12 68.6
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 33 374 3.03e-12 68.6
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 33 374 3.03e-12 68.6
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 170 511 3.06e-12 69.3
MS.gene044589.t1 AT3G20080 24.654 361 233 13 156 496 170 511 3.06e-12 69.3
MS.gene044589.t1 AT2G46660 23.789 227 157 7 240 462 279 493 3.15e-12 69.3
MS.gene044589.t1 AT2G23220 24.085 328 228 10 121 444 141 451 3.31e-12 68.9
MS.gene044589.t1 AT5G10610 23.361 488 293 23 9 459 7 450 3.57e-12 68.9
MS.gene044589.t1 AT1G33720 25.238 210 145 5 293 496 200 403 4.08e-12 68.6
MS.gene044589.t1 AT4G20240 23.659 410 261 15 29 416 34 413 4.53e-12 68.6
MS.gene044589.t1 AT2G24180 23.237 241 165 6 256 487 262 491 6.66e-12 68.2
MS.gene044589.t1 AT1G66540 23.875 289 190 10 169 448 1 268 7.88e-12 67.0
MS.gene044589.t1 AT4G37400 24.415 299 206 9 166 459 166 449 8.79e-12 67.8
MS.gene044589.t1 AT3G20130 25.954 262 172 10 241 490 225 476 1.17e-11 67.4
MS.gene044589.t1 AT3G20130 25.954 262 172 10 241 490 253 504 1.23e-11 67.4
MS.gene044589.t1 AT2G45560 24.910 277 184 9 230 495 246 509 1.35e-11 67.0
MS.gene044589.t1 AT2G30770 26.582 158 112 2 292 449 293 446 2.79e-11 66.2
MS.gene044589.t1 AT3G28740 24.294 354 222 13 121 459 134 456 3.17e-11 65.9
MS.gene044589.t1 AT2G45550 24.464 233 162 6 270 496 286 510 3.27e-11 65.9
MS.gene044589.t1 AT5G05260 25.962 208 145 5 241 447 273 472 3.59e-11 65.9
MS.gene044589.t1 AT3G20100 24.554 224 155 6 235 450 245 462 4.46e-11 65.5

Find 99 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATTGGAGAAATATTT+TGG 0.134143 7.3:+66093637 MS.gene044589:CDS
GCTCTCTCACATGGAATTTC+AGG 0.159034 7.3:-66094218 None:intergenic
TTCTGAGAAATCCACCTTTC+TGG 0.163522 7.3:-66094866 None:intergenic
TACCATCAAGTGAACATAAT+TGG 0.197349 7.3:+66094618 MS.gene044589:CDS
TCTTGTGGAAGCTGCAAAAT+TGG 0.201502 7.3:+66094291 MS.gene044589:CDS
TCGGAAGGGTGGAGGAAATA+TGG 0.227134 7.3:+66094819 MS.gene044589:CDS
GAACATAATTGGAAAGATTT+AGG 0.232318 7.3:+66094629 MS.gene044589:CDS
TTGTCCTTGCATTTCTCTTT+TGG 0.233225 7.3:-66094390 None:intergenic
AACAGAAAGACTTGGGATTA+TGG 0.258538 7.3:-66095041 None:intergenic
AACATATGTTCTGTGGTATT+AGG 0.264357 7.3:+66094164 MS.gene044589:CDS
TTCCAATTATGTTCACTTGA+TGG 0.285884 7.3:-66094620 None:intergenic
TGTAATGTGTTGCACGTTCT+TGG 0.286012 7.3:-66093871 None:intergenic
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.3:+66094967 MS.gene044589:CDS
TGCAGCTTCCACAAGAGTTT+TGG 0.307166 7.3:-66094284 None:intergenic
TTCTGTTGAGCCTCCAATAA+TGG 0.310818 7.3:-66093683 None:intergenic
TTAACCATGGTCCTTCAAAA+AGG 0.318367 7.3:-66093818 None:intergenic
ATCACAAAATGGCCTGTTCT+TGG 0.328489 7.3:+66093714 MS.gene044589:CDS
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7.3:+66094934 MS.gene044589:CDS
AGATCAATAGAAAGACATTT+AGG 0.370231 7.3:-66094194 None:intergenic
TGGAAAGATTTAGGAGCAAA+AGG 0.375361 7.3:+66094638 MS.gene044589:CDS
GAAACACACCAATCACAAAA+TGG 0.375398 7.3:+66093703 MS.gene044589:CDS
ACAGAAAGACTTGGGATTAT+GGG 0.382050 7.3:-66095040 None:intergenic
AAATTCATTGCTTTCAATGC+TGG 0.386232 7.3:+66094917 MS.gene044589:CDS
CGGAAGGGTGGAGGAAATAT+GGG 0.397563 7.3:+66094820 MS.gene044589:CDS
CTATTAGCTCGGGCCTTACT+TGG 0.399113 7.3:+66094528 MS.gene044589:CDS
GAAAGCAATGAATTTGTAAG+AGG 0.414835 7.3:-66094909 None:intergenic
TTAGGTCTGATTCACACATT+TGG 0.425646 7.3:+66093967 MS.gene044589:CDS
TGTGCAGATTTATGCTCAAA+AGG 0.438259 7.3:-66094725 None:intergenic
GTAATGTGTTGCACGTTCTT+GGG 0.456449 7.3:-66093870 None:intergenic
CGGAGGACACATTGTTCATA+AGG 0.457115 7.3:+66094252 MS.gene044589:CDS
AGCAAGTTAGTTTACCTACA+TGG 0.459663 7.3:+66094665 MS.gene044589:CDS
AGAATCTTAGCTTCAATCAA+AGG 0.460013 7.3:-66094575 None:intergenic
CCTGTTCTTGGAATGCTACC+TGG 0.461131 7.3:+66093726 MS.gene044589:CDS
ACACATGAAACATGGCTTGA+AGG 0.461488 7.3:+66095069 MS.gene044589:CDS
CCAGGTAGCATTCCAAGAAC+AGG 0.464630 7.3:-66093726 None:intergenic
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7.3:+66094935 MS.gene044589:CDS
GGAGTGATAATGTATGTGTT+TGG 0.471159 7.3:+66093618 None:intergenic
GGAAAGATTTAGGAGCAAAA+GGG 0.474975 7.3:+66094639 MS.gene044589:CDS
CTGCAAAATTGGTTTCAAGT+TGG 0.480614 7.3:+66094302 MS.gene044589:CDS
ATGTGCTTCCTAGTGGACAT+AGG 0.486334 7.3:+66094756 MS.gene044589:CDS
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7.3:+66094940 MS.gene044589:CDS
TTGCACGTTCTTGGGATCAC+TGG 0.495887 7.3:-66093862 None:intergenic
CTCTCTCACATGGAATTTCA+GGG 0.496357 7.3:-66094217 None:intergenic
GCTTGGAATTTAAACCAGAA+AGG 0.498570 7.3:+66094852 MS.gene044589:CDS
GAATCTTAGCTTCAATCAAA+GGG 0.500209 7.3:-66094574 None:intergenic
GACATAACTTTAAAACAAAA+CGG 0.501657 7.3:+66093786 MS.gene044589:CDS
TCAATTAATCTACTTGCAGC+TGG 0.503336 7.3:+66094497 MS.gene044589:CDS
TGTCCACTAGGAAGCACATC+AGG 0.504227 7.3:-66094752 None:intergenic
AATATCATTATGAATGAAGT+AGG 0.506125 7.3:+66094431 MS.gene044589:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.3:+66094835 MS.gene044589:CDS
ATAATGTATGTGTTTGGCAT+TGG 0.513303 7.3:+66093624 None:intergenic
TGTGTCCTCCGCTAGTGTAA+AGG 0.525215 7.3:-66094240 None:intergenic
TGGAAGAGATACTATTAGCT+CGG 0.527180 7.3:+66094517 MS.gene044589:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7.3:-66094941 None:intergenic
AGCACAAGATTCGAAAACTA+CGG 0.533439 7.3:+66093894 MS.gene044589:CDS
ATTATGAATGAAGTAGGAGA+TGG 0.541098 7.3:+66094437 MS.gene044589:CDS
TGTGCTTCCTAGTGGACATA+GGG 0.549066 7.3:+66094757 MS.gene044589:CDS
TCGTTGCAATCCATTATTGG+AGG 0.556704 7.3:+66093673 MS.gene044589:CDS
GAAAGGTGGATTTCTCAGAA+AGG 0.556835 7.3:+66094869 MS.gene044589:CDS
ATACTCCGTCGGAAGGGTGG+AGG 0.557016 7.3:+66094811 MS.gene044589:CDS
TGGAATTTAAACCAGAAAGG+TGG 0.560001 7.3:+66094855 MS.gene044589:CDS
GGAAGAGATACTATTAGCTC+GGG 0.561271 7.3:+66094518 MS.gene044589:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.3:+66094804 MS.gene044589:CDS
TGTAAGACAACAGAAAGACT+TGG 0.564398 7.3:-66095049 None:intergenic
AGTGTAAAGGCTCTCTCACA+TGG 0.565394 7.3:-66094227 None:intergenic
CACAACGTATCCAACATTCA+CGG 0.568204 7.3:+66093756 MS.gene044589:CDS
TCTATACTCCGTCGGAAGGG+TGG 0.569109 7.3:+66094808 MS.gene044589:CDS
TATTTCCTCCACCCTTCCGA+CGG 0.573423 7.3:-66094816 None:intergenic
GCACAAGATTCGAAAACTAC+GGG 0.574750 7.3:+66093895 MS.gene044589:CDS
CTTTGACAACATATGTTCTG+TGG 0.575024 7.3:+66094157 MS.gene044589:CDS
GTCTACATAACCGTGAATGT+TGG 0.575206 7.3:-66093766 None:intergenic
ATCTTAAGCCAAAACTCTTG+TGG 0.576068 7.3:+66094276 MS.gene044589:CDS
TTCTCTATACTCCGTCGGAA+GGG 0.579589 7.3:+66094805 MS.gene044589:CDS
AAAGCAATGAATTTGTAAGA+GGG 0.580193 7.3:-66094908 None:intergenic
GAATTATCGCATTCAAGTGG+TGG 0.580647 7.3:+66095009 MS.gene044589:CDS
ATGTTCATATTTGTTAACCA+TGG 0.582823 7.3:-66093831 None:intergenic
CACAGAACATATGTTGTCAA+AGG 0.582988 7.3:-66094156 None:intergenic
GATTTATGCTCAAAAGGTAT+CGG 0.588173 7.3:-66094719 None:intergenic
GGTGGATTTCTCAGAAAGGA+GGG 0.598377 7.3:+66094873 MS.gene044589:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.3:+66094687 MS.gene044589:CDS
GTTGAATTATCGCATTCAAG+TGG 0.606125 7.3:+66095006 MS.gene044589:CDS
AAACCTGATGTGCTTCCTAG+TGG 0.606972 7.3:+66094749 MS.gene044589:CDS
AGGTGGATTTCTCAGAAAGG+AGG 0.609698 7.3:+66094872 MS.gene044589:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.3:+66094800 MS.gene044589:CDS
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.3:+66094924 MS.gene044589:CDS
GTTGTCTTACACATGAAACA+TGG 0.631184 7.3:+66095061 MS.gene044589:CDS
GACTCAACCCTATGTCCACT+AGG 0.632364 7.3:-66094764 None:intergenic
GTAAGACAACAGAAAGACTT+GGG 0.634736 7.3:-66095048 None:intergenic
CTTCACATAAAGCTCCATGT+AGG 0.635547 7.3:-66094679 None:intergenic
ATGGTTAACAAATATGAACA+TGG 0.638409 7.3:+66093833 MS.gene044589:CDS
GGAAGGGTGGAGGAAATATG+GGG 0.642362 7.3:+66094821 MS.gene044589:CDS
AGATTCGAAAACTACGGGAA+AGG 0.642747 7.3:+66093900 MS.gene044589:CDS
AAAACCAAAAGAGAAATGCA+AGG 0.650772 7.3:+66094386 MS.gene044589:CDS
TTATGCTCAAAAGGTATCGG+CGG 0.659417 7.3:-66094716 None:intergenic
GATACGTTGTGTAAGAGACC+AGG 0.668163 7.3:-66093744 None:intergenic
TGAGAGAGCCTTTACACTAG+CGG 0.678400 7.3:+66094232 MS.gene044589:CDS
TATCGGCGGATAAAGCCTCA+AGG 0.679760 7.3:-66094702 None:intergenic
GAGAGCCTTTACACTAGCGG+AGG 0.710609 7.3:+66094235 MS.gene044589:CDS
ATAACTTTAAAACAAAACGG+AGG 0.737890 7.3:+66093789 MS.gene044589:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCATTATGAATGAAGT+AGG + chr7.3:66094431-66094450 MS.gene044589:CDS 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG + chr7.3:66094129-66094148 MS.gene044589:CDS 20.0%
!!! GACATAACTTTAAAACAAAA+CGG + chr7.3:66093786-66093805 MS.gene044589:CDS 20.0%
!!! GTTACAAATTTTTTTCTCAA+CGG - chr7.3:66094060-66094079 None:intergenic 20.0%
! AAAGCAATGAATTTGTAAGA+GGG - chr7.3:66094911-66094930 None:intergenic 25.0%
! AGATCAATAGAAAGACATTT+AGG - chr7.3:66094197-66094216 None:intergenic 25.0%
! ATGGTTAACAAATATGAACA+TGG + chr7.3:66093833-66093852 MS.gene044589:CDS 25.0%
! GAACATAATTGGAAAGATTT+AGG + chr7.3:66094629-66094648 MS.gene044589:CDS 25.0%
!! ATGTTCATATTTGTTAACCA+TGG - chr7.3:66093834-66093853 None:intergenic 25.0%
!!! ATAACTTTAAAACAAAACGG+AGG + chr7.3:66093789-66093808 MS.gene044589:CDS 25.0%
AAAACCAAAAGAGAAATGCA+AGG + chr7.3:66094386-66094405 MS.gene044589:CDS 30.0%
AAATTCATTGCTTTCAATGC+TGG + chr7.3:66094917-66094936 MS.gene044589:CDS 30.0%
AACATATGTTCTGTGGTATT+AGG + chr7.3:66094164-66094183 MS.gene044589:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG + chr7.3:66094967-66094986 MS.gene044589:CDS 30.0%
AGAATCTTAGCTTCAATCAA+AGG - chr7.3:66094578-66094597 None:intergenic 30.0%
ATTATGAATGAAGTAGGAGA+TGG + chr7.3:66094437-66094456 MS.gene044589:CDS 30.0%
GAAAGCAATGAATTTGTAAG+AGG - chr7.3:66094912-66094931 None:intergenic 30.0%
GAATCTTAGCTTCAATCAAA+GGG - chr7.3:66094577-66094596 None:intergenic 30.0%
TACCATCAAGTGAACATAAT+TGG + chr7.3:66094618-66094637 MS.gene044589:CDS 30.0%
TTCCAATTATGTTCACTTGA+TGG - chr7.3:66094623-66094642 None:intergenic 30.0%
! GATTTATGCTCAAAAGGTAT+CGG - chr7.3:66094722-66094741 None:intergenic 30.0%
! TTCTTGGAGAAGGAATTTTT+AGG + chr7.3:66093949-66093968 MS.gene044589:CDS 30.0%
! TTGACCATGCTTCTAAAAAT+GGG + chr7.3:66094096-66094115 MS.gene044589:CDS 30.0%
! TTTCAAGCAGGAAAATTTTC+AGG + chr7.3:66094019-66094038 MS.gene044589:CDS 30.0%
! TTTTCGTTGCAATCCATTAT+TGG + chr7.3:66093670-66093689 MS.gene044589:CDS 30.0%
!! TGGCATTGGAGAAATATTTT+GGG + chr7.3:66093638-66093657 MS.gene044589:CDS 30.0%
!! TTGGCATTGGAGAAATATTT+TGG + chr7.3:66093637-66093656 MS.gene044589:CDS 30.0%
!!! AGAGAGATTTTTGAAGTTCT+TGG + chr7.3:66093933-66093952 MS.gene044589:CDS 30.0%
!!! ATTTTTGAAGTTCTTGGAGA+AGG + chr7.3:66093939-66093958 MS.gene044589:CDS 30.0%
AACAGAAAGACTTGGGATTA+TGG - chr7.3:66095044-66095063 None:intergenic 35.0%
ACAGAAAGACTTGGGATTAT+GGG - chr7.3:66095043-66095062 None:intergenic 35.0%
AGCACAAGATTCGAAAACTA+CGG + chr7.3:66093894-66093913 MS.gene044589:CDS 35.0%
ATCTTAAGCCAAAACTCTTG+TGG + chr7.3:66094276-66094295 MS.gene044589:CDS 35.0%
CACAGAACATATGTTGTCAA+AGG - chr7.3:66094159-66094178 None:intergenic 35.0%
CTTTGACAACATATGTTCTG+TGG + chr7.3:66094157-66094176 MS.gene044589:CDS 35.0%
GAAACACACCAATCACAAAA+TGG + chr7.3:66093703-66093722 MS.gene044589:CDS 35.0%
GCTTGGAATTTAAACCAGAA+AGG + chr7.3:66094852-66094871 MS.gene044589:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG + chr7.3:66094639-66094658 MS.gene044589:CDS 35.0%
GTAAGACAACAGAAAGACTT+GGG - chr7.3:66095051-66095070 None:intergenic 35.0%
GTTGAATTATCGCATTCAAG+TGG + chr7.3:66095006-66095025 MS.gene044589:CDS 35.0%
GTTGTCTTACACATGAAACA+TGG + chr7.3:66095061-66095080 MS.gene044589:CDS 35.0%
TCAATTAATCTACTTGCAGC+TGG + chr7.3:66094497-66094516 MS.gene044589:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG + chr7.3:66094638-66094657 MS.gene044589:CDS 35.0%
TGGAAGAGATACTATTAGCT+CGG + chr7.3:66094517-66094536 MS.gene044589:CDS 35.0%
TGGAATTTAAACCAGAAAGG+TGG + chr7.3:66094855-66094874 MS.gene044589:CDS 35.0%
TGTAAGACAACAGAAAGACT+TGG - chr7.3:66095052-66095071 None:intergenic 35.0%
TGTGCAGATTTATGCTCAAA+AGG - chr7.3:66094728-66094747 None:intergenic 35.0%
TTAACCATGGTCCTTCAAAA+AGG - chr7.3:66093821-66093840 None:intergenic 35.0%
TTAGGTCTGATTCACACATT+TGG + chr7.3:66093967-66093986 MS.gene044589:CDS 35.0%
! AGCAAGTTAGTTTACCTACA+TGG + chr7.3:66094665-66094684 MS.gene044589:CDS 35.0%
! CTGCAAAATTGGTTTCAAGT+TGG + chr7.3:66094302-66094321 MS.gene044589:CDS 35.0%
! CTTGACCATGCTTCTAAAAA+TGG + chr7.3:66094095-66094114 MS.gene044589:CDS 35.0%
! TGACCATGCTTCTAAAAATG+GGG + chr7.3:66094097-66094116 MS.gene044589:CDS 35.0%
! TTGTCCTTGCATTTCTCTTT+TGG - chr7.3:66094393-66094412 None:intergenic 35.0%
!! ACTTCACTCAATTTTCAAGC+AGG + chr7.3:66094007-66094026 MS.gene044589:CDS 35.0%
AATATGGGGAGAAGATTGCT+TGG + chr7.3:66094835-66094854 MS.gene044589:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG + chr7.3:66095069-66095088 MS.gene044589:CDS 40.0%
AGATTCGAAAACTACGGGAA+AGG + chr7.3:66093900-66093919 MS.gene044589:CDS 40.0%
ATCACAAAATGGCCTGTTCT+TGG + chr7.3:66093714-66093733 MS.gene044589:CDS 40.0%
CACAACGTATCCAACATTCA+CGG + chr7.3:66093756-66093775 MS.gene044589:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG - chr7.3:66094544-66094563 None:intergenic 40.0%
CTCTCTCACATGGAATTTCA+GGG - chr7.3:66094220-66094239 None:intergenic 40.0%
CTTCACATAAAGCTCCATGT+AGG - chr7.3:66094682-66094701 None:intergenic 40.0%
GAATTATCGCATTCAAGTGG+TGG + chr7.3:66095009-66095028 MS.gene044589:CDS 40.0%
GCACAAGATTCGAAAACTAC+GGG + chr7.3:66093895-66093914 MS.gene044589:CDS 40.0%
GGAAGAGATACTATTAGCTC+GGG + chr7.3:66094518-66094537 MS.gene044589:CDS 40.0%
GTAATGTGTTGCACGTTCTT+GGG - chr7.3:66093873-66093892 None:intergenic 40.0%
GTCTACATAACCGTGAATGT+TGG - chr7.3:66093769-66093788 None:intergenic 40.0%
GTGTATTCTCTATACTCCGT+CGG + chr7.3:66094800-66094819 MS.gene044589:CDS 40.0%
TCGTTGCAATCCATTATTGG+AGG + chr7.3:66093673-66093692 MS.gene044589:CDS 40.0%
TCTTGTGGAAGCTGCAAAAT+TGG + chr7.3:66094291-66094310 MS.gene044589:CDS 40.0%
TGTAATGTGTTGCACGTTCT+TGG - chr7.3:66093874-66093893 None:intergenic 40.0%
TTCTGTTGAGCCTCCAATAA+TGG - chr7.3:66093686-66093705 None:intergenic 40.0%
! GAAAGGTGGATTTCTCAGAA+AGG + chr7.3:66094869-66094888 MS.gene044589:CDS 40.0%
! GGAGGAACATTCCTTTTTGA+AGG + chr7.3:66093807-66093826 MS.gene044589:CDS 40.0%
! TTCTAAAAATGGGGTGCAAG+TGG + chr7.3:66094106-66094125 MS.gene044589:CDS 40.0%
! TTCTGAGAAATCCACCTTTC+TGG - chr7.3:66094869-66094888 None:intergenic 40.0%
!! AGAACAGGCCATTTTGTGAT+TGG - chr7.3:66093714-66093733 None:intergenic 40.0%
!! CATTCCTTTTTGAAGGACCA+TGG + chr7.3:66093814-66093833 MS.gene044589:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG + chr7.3:66094541-66094560 MS.gene044589:CDS 40.0%
!! TTATGCTCAAAAGGTATCGG+CGG - chr7.3:66094719-66094738 None:intergenic 40.0%
AAACCTGATGTGCTTCCTAG+TGG + chr7.3:66094749-66094768 MS.gene044589:CDS 45.0%
ACCAAGGAGTTGTTTGGGTA+AGG + chr7.3:66094940-66094959 MS.gene044589:CDS 45.0%
AGTGTAAAGGCTCTCTCACA+TGG - chr7.3:66094230-66094249 None:intergenic 45.0%
ATTCTCTATACTCCGTCGGA+AGG + chr7.3:66094804-66094823 MS.gene044589:CDS 45.0%
CGGAGGACACATTGTTCATA+AGG + chr7.3:66094252-66094271 MS.gene044589:CDS 45.0%
GATACGTTGTGTAAGAGACC+AGG - chr7.3:66093747-66093766 None:intergenic 45.0%
GCTCTCTCACATGGAATTTC+AGG - chr7.3:66094221-66094240 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG - chr7.3:66094944-66094963 None:intergenic 45.0%
TGAGAGAGCCTTTACACTAG+CGG + chr7.3:66094232-66094251 MS.gene044589:CDS 45.0%
TTCTCTATACTCCGTCGGAA+GGG + chr7.3:66094805-66094824 MS.gene044589:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG + chr7.3:66094924-66094943 MS.gene044589:CDS 45.0%
! AGGTGGATTTCTCAGAAAGG+AGG + chr7.3:66094872-66094891 MS.gene044589:CDS 45.0%
! ATGTGCTTCCTAGTGGACAT+AGG + chr7.3:66094756-66094775 MS.gene044589:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG + chr7.3:66094687-66094706 MS.gene044589:CDS 45.0%
! GGTGGATTTCTCAGAAAGGA+GGG + chr7.3:66094873-66094892 MS.gene044589:CDS 45.0%
! TGCAGCTTCCACAAGAGTTT+TGG - chr7.3:66094287-66094306 None:intergenic 45.0%
! TGTGCTTCCTAGTGGACATA+GGG + chr7.3:66094757-66094776 MS.gene044589:CDS 45.0%
!! GCACCCCATTTTTAGAAGCA+TGG - chr7.3:66094103-66094122 None:intergenic 45.0%
CCAGGTAGCATTCCAAGAAC+AGG - chr7.3:66093729-66093748 None:intergenic 50.0%
CCTGTTCTTGGAATGCTACC+TGG + chr7.3:66093726-66093745 MS.gene044589:CDS 50.0%
CGGAAGGGTGGAGGAAATAT+GGG + chr7.3:66094820-66094839 MS.gene044589:CDS 50.0%
CTATTAGCTCGGGCCTTACT+TGG + chr7.3:66094528-66094547 MS.gene044589:CDS 50.0%
GACTCAACCCTATGTCCACT+AGG - chr7.3:66094767-66094786 None:intergenic 50.0%
GCTGGACCAAGGAGTTGTTT+GGG + chr7.3:66094935-66094954 MS.gene044589:CDS 50.0%
GGAAGGGTGGAGGAAATATG+GGG + chr7.3:66094821-66094840 MS.gene044589:CDS 50.0%
TATCGGCGGATAAAGCCTCA+AGG - chr7.3:66094705-66094724 None:intergenic 50.0%
TATTTCCTCCACCCTTCCGA+CGG - chr7.3:66094819-66094838 None:intergenic 50.0%
TCGGAAGGGTGGAGGAAATA+TGG + chr7.3:66094819-66094838 MS.gene044589:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG + chr7.3:66094934-66094953 MS.gene044589:CDS 50.0%
TGTGTCCTCCGCTAGTGTAA+AGG - chr7.3:66094243-66094262 None:intergenic 50.0%
TTGCACGTTCTTGGGATCAC+TGG - chr7.3:66093865-66093884 None:intergenic 50.0%
! TGTCCACTAGGAAGCACATC+AGG - chr7.3:66094755-66094774 None:intergenic 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG + chr7.3:66094537-66094556 MS.gene044589:CDS 50.0%
GAGAGCCTTTACACTAGCGG+AGG + chr7.3:66094235-66094254 MS.gene044589:CDS 55.0%
TCTATACTCCGTCGGAAGGG+TGG + chr7.3:66094808-66094827 MS.gene044589:CDS 55.0%
ATACTCCGTCGGAAGGGTGG+AGG + chr7.3:66094811-66094830 MS.gene044589:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 66093627 66095117 66093627 ID=MS.gene044589
chr7.3 mRNA 66093627 66095117 66093627 ID=MS.gene044589.t1;Parent=MS.gene044589
chr7.3 exon 66093627 66095117 66093627 ID=MS.gene044589.t1.exon1;Parent=MS.gene044589.t1
chr7.3 CDS 66093627 66095117 66093627 ID=cds.MS.gene044589.t1;Parent=MS.gene044589.t1
Gene Sequence

>MS.gene044589

ATGTATGTGTTTGGCATTGGAGAAATATTTTGGGCAGTTCTTGTTTTCGTTGCAATCCATTATTGGAGGCTCAACAGAAACACACCAATCACAAAATGGCCTGTTCTTGGAATGCTACCTGGTCTCTTACACAACGTATCCAACATTCACGGTTATGTAGACATAACTTTAAAACAAAACGGAGGAACATTCCTTTTTGAAGGACCATGGTTAACAAATATGAACATGGTTTGCACCAGTGATCCCAAGAACGTGCAACACATTACAAGCACAAGATTCGAAAACTACGGGAAAGGAAACGATTTCAGAGAGATTTTTGAAGTTCTTGGAGAAGGAATTTTTAGGTCTGATTCACACATTTGGAAGTACAACAGAAAGCTACTTCACTCAATTTTCAAGCAGGAAAATTTTCAGGTATTTATTCAAAAAACCGTTGAGAAAAAAATTTGTAACTATCTTCTTGTATTTCTTGACCATGCTTCTAAAAATGGGGTGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAACATATGTTCTGTGGTATTAGGATTTGATCCTAAATGTCTTTCTATTGATCTCCCTGAAATTCCATGTGAGAGAGCCTTTACACTAGCGGAGGACACATTGTTCATAAGGCATCTTAAGCCAAAACTCTTGTGGAAGCTGCAAAATTGGTTTCAAGTTGGTGAAGAGAAACAATTTATAAAGAATAATAAATTTATTGATGAAATGTTGTATTCAGAAATCAAAACCAAAAGAGAAATGCAAGGACAACAAAAATTTGACTTGCTAAATATCATTATGAATGAAGTAGGAGATGGAGAAAATCTAATAGATGACAAGTTTTTGAGAGATACATCAATTAATCTACTTGCAGCTGGAAGAGATACTATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTTGCGACGCACCCTTTGATTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGTGAACATAATTGGAAAGATTTAGGAGCAAAAGGGTTTAGCAAGTTAGTTTACCTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCGCCGATACCTTTTGAGCATAAATCTGCACAGAAACCTGATGTGCTTCCTAGTGGACATAGGGTTGAGTCAAATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTCTCAGAAAGGAGGGATAGTTCATGTTCCCTCTTACAAATTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCGCATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTCTTTCTGTTGTCTTACACATGAAACATGGCTTGAAGGTTAATCTCAAAAAAAGAAGCATTTAA

Protein sequence

>MS.gene044589.t1

MYVFGIGEIFWAVLVFVAIHYWRLNRNTPITKWPVLGMLPGLLHNVSNIHGYVDITLKQNGGTFLFEGPWLTNMNMVCTSDPKNVQHITSTRFENYGKGNDFREIFEVLGEGIFRSDSHIWKYNRKLLHSIFKQENFQVFIQKTVEKKICNYLLVFLDHASKNGVQVDLQDIFQRLTFDNICSVVLGFDPKCLSIDLPEIPCERAFTLAEDTLFIRHLKPKLLWKLQNWFQVGEEKQFIKNNKFIDEMLYSEIKTKREMQGQQKFDLLNIIMNEVGDGENLIDDKFLRDTSINLLAAGRDTISSGLTWFFWLVATHPLIEAKILEEIKENLPSSEHNWKDLGAKGFSKLVYLHGALCEALRLYPPIPFEHKSAQKPDVLPSGHRVESNTMIVYSLYSVGRVEEIWGEDCLEFKPERWISQKGGIVHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYRIQVVEDHPIIPSLSVVLHMKHGLKVNLKKRSI