AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94332


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94332.t1 MTR_1g036200 89.053 475 42 2 1 474 36 501 0.0 872
MS.gene94332.t1 MTR_1g050362 80.127 473 93 1 1 473 36 507 0.0 800
MS.gene94332.t1 MTR_1g035790 75.949 474 107 1 1 474 38 504 0.0 748
MS.gene94332.t1 MTR_1g035580 73.840 474 112 1 1 474 37 498 0.0 733
MS.gene94332.t1 MTR_1g035800 73.684 475 122 2 1 472 38 512 0.0 713
MS.gene94332.t1 MTR_1g036270 71.488 477 132 3 1 474 38 513 0.0 694
MS.gene94332.t1 MTR_1g035750 63.789 475 166 5 1 474 38 507 0.0 617
MS.gene94332.t1 MTR_1g035670 62.869 474 168 4 1 474 39 504 0.0 614
MS.gene94332.t1 MTR_1g036130 62.236 474 175 3 1 474 39 508 0.0 611
MS.gene94332.t1 MTR_1g036010 59.579 475 187 4 1 474 39 509 0.0 582
MS.gene94332.t1 MTR_1g035760 60.759 474 155 3 1 474 39 481 0.0 579
MS.gene94332.t1 MTR_1g035940 60.211 475 184 4 1 474 39 509 0.0 578
MS.gene94332.t1 MTR_1g035830 60.421 475 183 4 1 474 39 509 0.0 577
MS.gene94332.t1 MTR_1g069715 61.614 409 154 3 47 454 1 407 1.88e-180 521
MS.gene94332.t1 MTR_7g033580 55.042 476 195 7 1 474 38 496 2.19e-180 514
MS.gene94332.t1 MTR_1g035860 60.628 414 155 4 1 414 45 450 5.79e-179 511
MS.gene94332.t1 MTR_7g033570 53.782 476 201 8 1 474 38 496 2.31e-178 509
MS.gene94332.t1 MTR_8g088470 51.899 474 210 6 1 472 34 491 1.67e-173 496
MS.gene94332.t1 MTR_6g004630 52.830 477 210 7 1 474 41 505 5.35e-173 496
MS.gene94332.t1 MTR_6g004670 51.363 477 214 8 1 472 42 505 3.06e-169 486
MS.gene94332.t1 MTR_6g004610 51.899 474 213 7 1 471 1 462 4.97e-169 484
MS.gene94332.t1 MTR_6g004600 50.932 483 221 8 1 474 42 517 1.83e-168 484
MS.gene94332.t1 MTR_6g004590 50.311 483 224 7 1 474 42 517 2.63e-165 477
MS.gene94332.t1 MTR_1g037550 38.866 494 264 11 1 473 72 548 6.83e-113 344
MS.gene94332.t1 MTR_1g037560 38.430 484 276 11 1 473 72 544 8.68e-113 343
MS.gene94332.t1 MTR_4g075110 37.938 485 274 12 1 472 79 549 1.14e-104 323
MS.gene94332.t1 MTR_4g012320 57.727 220 92 1 255 474 7 225 2.04e-92 280
MS.gene94332.t1 MTR_8g098435 35.197 483 285 10 2 472 39 505 1.01e-90 285
MS.gene94332.t1 MTR_8g030590 34.979 486 287 10 2 472 39 510 3.55e-90 285
MS.gene94332.t1 MTR_5g070010 34.774 486 285 10 2 472 40 508 5.77e-89 281
MS.gene94332.t1 MTR_3g463060 34.711 484 277 11 2 472 45 502 3.55e-86 273
MS.gene94332.t1 MTR_7g088330 34.702 487 276 12 2 472 48 508 5.50e-81 260
MS.gene94332.t1 MTR_7g096340 32.658 444 263 9 41 473 85 503 1.19e-80 259
MS.gene94332.t1 MTR_7g096320 33.108 444 261 9 41 473 86 504 3.81e-80 258
MS.gene94332.t1 MTR_3g080580 34.222 450 262 10 41 473 86 518 5.27e-79 255
MS.gene94332.t1 MTR_1g070345 35.874 446 247 12 41 473 86 505 1.55e-77 251
MS.gene94332.t1 MTR_7g029275 34.086 443 261 10 41 472 86 508 5.42e-77 249
MS.gene94332.t1 MTR_8g035860 33.753 477 290 13 6 473 51 510 2.85e-75 245
MS.gene94332.t1 MTR_4g054920 35.730 445 252 12 42 472 92 516 3.71e-74 242
MS.gene94332.t1 MTR_8g035810 32.627 472 293 13 10 472 55 510 1.11e-73 241
MS.gene94332.t1 MTR_2g086040 33.034 445 261 10 36 472 83 498 2.24e-73 240
MS.gene94332.t1 MTR_8g035780 33.933 445 267 11 41 473 82 511 9.39e-73 239
MS.gene94332.t1 MTR_1g070365 33.933 445 255 11 41 472 86 504 1.47e-72 238
MS.gene94332.t1 MTR_8g035820 33.051 472 290 13 11 473 56 510 5.52e-72 236
MS.gene94332.t1 MTR_1g060550 34.978 446 250 15 41 472 93 512 1.87e-71 235
MS.gene94332.t1 MTR_8g035760 30.444 473 304 10 6 472 58 511 4.26e-68 226
MS.gene94332.t1 MTR_8g035680 29.958 474 306 11 6 472 58 512 2.28e-67 224
MS.gene94332.t1 MTR_4g119660 30.707 495 297 14 6 473 41 516 2.98e-63 214
MS.gene94332.t1 MTR_1g102220 29.773 440 286 9 41 472 82 506 5.26e-63 213
MS.gene94332.t1 MTR_5g019140 30.707 495 297 14 6 473 56 531 8.41e-63 213
MS.gene94332.t1 MTR_8g035810 32.126 414 257 12 10 415 55 452 2.69e-59 202
MS.gene94332.t1 MTR_7g406990 35.143 350 210 10 1 344 55 393 1.02e-57 197
MS.gene94332.t1 MTR_8g035680 30.726 358 229 7 121 472 21 365 5.60e-50 174
MS.gene94332.t1 MTR_1g040110 56.757 111 48 0 89 199 57 167 6.70e-39 139
MS.gene94332.t1 MTR_8g035810 30.000 340 217 10 10 342 55 380 1.27e-38 145
MS.gene94332.t1 MTR_6g084040 50.694 144 51 3 1 143 38 162 3.09e-37 134
MS.gene94332.t1 MTR_1g070370 32.308 260 153 7 132 390 5 242 3.84e-35 131
MS.gene94332.t1 MTR_1g050590 57.025 121 45 3 215 335 5 118 6.88e-33 121
MS.gene94332.t1 MTR_1g102210 26.331 357 218 8 123 472 43 361 1.18e-32 127
MS.gene94332.t1 MTR_7g079440 26.281 449 286 18 39 472 230 648 3.20e-31 127
MS.gene94332.t1 MTR_5g009110 24.576 472 302 17 40 473 116 571 7.59e-27 114
MS.gene94332.t1 MTR_1g036140 54.000 100 40 2 215 314 69 162 6.89e-24 98.6
MS.gene94332.t1 MTR_1g062190 23.490 447 302 17 39 472 120 539 2.05e-23 103
MS.gene94332.t1 MTR_8g035790 47.000 100 49 3 376 473 1 98 4.95e-23 94.0
MS.gene94332.t1 MTR_8g098565 26.005 373 250 10 109 472 151 506 1.68e-22 100
MS.gene94332.t1 MTR_2g010320 25.897 390 266 10 89 472 131 503 3.67e-22 99.8
MS.gene94332.t1 MTR_7g079440 26.757 370 228 16 39 395 230 569 1.42e-21 98.2
MS.gene94332.t1 MTR_2g010290 26.909 275 193 4 205 472 259 532 4.11e-21 96.7
MS.gene94332.t1 MTR_2g010250 28.889 225 151 4 251 472 287 505 4.88e-21 96.3
MS.gene94332.t1 MTR_5g009110 23.288 438 284 15 73 473 1 423 1.22e-20 94.4
MS.gene94332.t1 MTR_8g046580 46.000 100 51 2 349 447 195 292 1.64e-20 92.4
MS.gene94332.t1 MTR_6g008530 26.939 245 172 4 200 443 257 495 2.11e-20 94.4
MS.gene94332.t1 MTR_3g093530 23.377 462 313 13 20 471 93 523 5.92e-20 92.8
MS.gene94332.t1 MTR_2g062670 33.663 202 98 6 112 304 49 223 9.13e-20 92.4
MS.gene94332.t1 MTR_6g017325 26.906 223 151 5 245 467 292 502 1.04e-19 92.0
MS.gene94332.t1 MTR_2g010330 27.556 225 154 4 251 472 289 507 5.31e-19 90.1
MS.gene94332.t1 MTR_1g101040 29.388 245 153 7 233 469 280 512 7.23e-19 89.7
MS.gene94332.t1 MTR_2g010380 27.556 225 154 4 251 472 291 509 8.56e-19 89.4
MS.gene94332.t1 MTR_2g010280 28.000 225 153 4 251 472 285 503 1.29e-18 89.0
MS.gene94332.t1 MTR_7g006900 21.675 406 267 12 73 467 102 467 2.36e-18 87.8
MS.gene94332.t1 MTR_2g072270 21.591 440 297 14 41 467 114 518 3.77e-18 87.4
MS.gene94332.t1 MTR_1g101050 28.148 270 177 7 203 469 253 508 7.54e-18 86.7
MS.gene94332.t1 MTR_6g008500 26.562 256 169 8 195 443 258 501 8.11e-18 86.7
MS.gene94332.t1 MTR_8g042060 22.296 453 287 14 41 471 114 523 1.67e-17 85.5
MS.gene94332.t1 MTR_6g072490 30.290 241 144 9 239 469 284 510 1.81e-17 85.5
MS.gene94332.t1 MTR_7g055793 22.293 471 322 13 13 471 30 468 2.70e-17 84.7
MS.gene94332.t1 MTR_7g055793 22.293 471 322 13 13 471 85 523 3.46e-17 84.3
MS.gene94332.t1 MTR_6g008600 25.623 281 172 9 188 443 225 493 5.02e-17 84.0
MS.gene94332.t1 MTR_8g008530 25.592 211 150 4 261 471 315 518 5.29e-17 84.0
MS.gene94332.t1 MTR_6g008620 25.498 251 177 6 195 443 249 491 5.66e-17 84.0
MS.gene94332.t1 MTR_5g009110 25.758 330 222 11 40 360 116 431 5.81e-17 83.6
MS.gene94332.t1 MTR_8g104030 26.122 245 164 7 200 438 8 241 1.02e-16 80.9
MS.gene94332.t1 MTR_2g072400 23.591 479 289 20 19 471 88 515 1.11e-16 82.8
MS.gene94332.t1 MTR_4g088420 31.522 184 113 6 274 453 34 208 1.23e-16 79.7
MS.gene94332.t1 MTR_7g012860 27.801 241 154 7 212 448 247 471 1.37e-16 82.4
MS.gene94332.t1 MTR_0287s0060 27.801 241 154 7 212 448 247 471 1.37e-16 82.4
MS.gene94332.t1 MTR_5g095230 24.242 462 300 21 22 471 90 513 1.48e-16 82.4
MS.gene94332.t1 MTR_5g034900 28.293 205 141 4 271 472 316 517 1.60e-16 82.4
MS.gene94332.t1 MTR_6g008650 26.056 284 171 9 193 459 246 507 2.49e-16 82.0
MS.gene94332.t1 MTR_0025s0110 29.130 230 150 6 245 469 302 523 2.94e-16 81.6
MS.gene94332.t1 MTR_6g084770 24.468 376 240 15 77 438 121 466 3.12e-16 81.6
MS.gene94332.t1 MTR_4g071710 27.208 283 180 10 203 469 234 506 3.29e-16 81.3
MS.gene94332.t1 MTR_0022s0290 27.273 253 173 6 200 448 242 487 3.29e-16 81.3
MS.gene94332.t1 MTR_4g104610 24.797 246 174 4 200 441 227 465 3.75e-16 81.3
MS.gene94332.t1 MTR_3g014880 26.740 273 168 9 195 453 248 502 3.94e-16 81.3
MS.gene94332.t1 MTR_1g015860 29.845 258 157 9 228 473 284 529 4.27e-16 81.3
MS.gene94332.t1 MTR_2g010300 25.664 226 145 5 251 473 285 490 5.01e-16 80.9
MS.gene94332.t1 MTR_3g025260 23.587 407 252 17 63 448 109 477 5.31e-16 80.9
MS.gene94332.t1 MTR_7g075610 25.526 380 235 17 110 470 151 501 6.65e-16 80.5
MS.gene94332.t1 MTR_6g008640 26.766 269 183 7 195 459 247 505 6.85e-16 80.5
MS.gene94332.t1 MTR_3g024520 28.070 342 196 16 156 473 200 515 7.06e-16 80.5
MS.gene94332.t1 MTR_8g042060 23.782 349 219 10 137 471 172 487 8.44e-16 80.1
MS.gene94332.t1 MTR_7g087520 25.060 419 278 20 39 441 80 478 8.47e-16 80.1
MS.gene94332.t1 MTR_1g085680 21.381 449 288 10 41 467 106 511 9.95e-16 80.1
MS.gene94332.t1 MTR_2g072340 23.044 473 299 19 19 471 88 515 1.01e-15 79.7
MS.gene94332.t1 MTR_8g042000 22.567 483 285 15 15 464 90 516 1.33e-15 79.7
MS.gene94332.t1 MTR_2g023680 21.413 453 306 13 33 471 101 517 2.15e-15 79.0
MS.gene94332.t1 MTR_4g048580 22.849 372 249 12 77 441 124 464 3.38e-15 78.2
MS.gene94332.t1 MTR_1g023730 26.201 229 161 5 220 448 262 482 4.21e-15 77.8
MS.gene94332.t1 MTR_6g084900 26.736 288 169 12 206 472 2 268 4.33e-15 75.9
MS.gene94332.t1 MTR_4g088400 27.586 261 173 7 195 453 250 496 5.70e-15 77.4
MS.gene94332.t1 MTR_3g104560 29.344 259 157 7 228 473 157 402 5.72e-15 77.0
MS.gene94332.t1 MTR_3g057900 24.798 371 241 15 78 441 122 461 5.83e-15 77.4
MS.gene94332.t1 MTR_3g025230 27.795 331 187 15 151 459 199 499 8.16e-15 77.0
MS.gene94332.t1 MTR_8g012585 24.074 378 256 13 93 461 81 436 1.03e-14 76.6
MS.gene94332.t1 MTR_8g027040 26.374 273 177 9 206 472 291 545 1.25e-14 76.6
MS.gene94332.t1 MTR_8g042020 23.094 459 290 16 33 471 107 522 1.31e-14 76.6
MS.gene94332.t1 MTR_5g094520 24.806 387 237 17 77 448 155 502 1.32e-14 76.6
MS.gene94332.t1 MTR_3g057970 27.092 251 162 9 195 441 222 455 1.35e-14 76.3
MS.gene94332.t1 MTR_3g104560 29.344 259 157 7 228 473 292 537 1.37e-14 76.6
MS.gene94332.t1 MTR_5g094520 24.543 383 243 16 77 448 50 397 1.37e-14 75.9
MS.gene94332.t1 MTR_2g061740 29.787 188 114 5 35 208 9 192 1.40e-14 72.8
MS.gene94332.t1 MTR_2g061200 21.412 425 277 10 72 471 136 528 1.41e-14 76.3
MS.gene94332.t1 MTR_6g042610 24.627 268 189 8 195 458 241 499 1.47e-14 76.3
MS.gene94332.t1 MTR_3g057980 27.083 240 150 10 210 441 238 460 1.69e-14 75.9
MS.gene94332.t1 MTR_8g466180 23.611 288 199 10 170 448 197 472 1.73e-14 75.9
MS.gene94332.t1 MTR_5g073250 22.427 379 256 14 77 448 124 471 2.25e-14 75.5
MS.gene94332.t1 MTR_8g104100 29.787 188 109 7 264 441 55 229 2.63e-14 73.6
MS.gene94332.t1 MTR_4g018800 25.292 257 170 8 195 443 249 491 3.38e-14 75.1
MS.gene94332.t1 MTR_8g469360 22.926 458 288 15 35 471 10 423 3.39e-14 74.7
MS.gene94332.t1 MTR_4g104570 28.655 171 115 3 271 441 1 164 3.70e-14 71.6
MS.gene94332.t1 MTR_5g070690 23.988 346 241 8 95 438 138 463 3.95e-14 75.1
MS.gene94332.t1 MTR_5g070800 23.988 346 241 8 95 438 138 463 3.95e-14 75.1
MS.gene94332.t1 MTR_7g098550 22.991 448 280 13 33 467 97 492 5.02e-14 74.7
MS.gene94332.t1 MTR_6g008430 23.462 260 188 6 195 453 245 494 5.31e-14 74.7
MS.gene94332.t1 MTR_8g012590 23.390 295 214 7 177 469 209 493 5.48e-14 74.3
MS.gene94332.t1 MTR_4g104540 22.888 367 244 13 85 441 58 395 5.77e-14 73.9
MS.gene94332.t1 MTR_4g109470 27.698 278 162 12 175 437 210 463 7.95e-14 73.9
MS.gene94332.t1 MTR_5g018500 28.834 163 108 5 283 443 4 160 8.02e-14 70.5
MS.gene94332.t1 MTR_7g012330 25.726 241 157 7 212 448 248 470 8.26e-14 73.9
MS.gene94332.t1 MTR_5g016440 31.050 219 133 9 261 474 284 489 9.08e-14 73.6
MS.gene94332.t1 MTR_5g094540 24.194 248 160 8 204 441 235 464 9.66e-14 73.6
MS.gene94332.t1 MTR_8g063280 25.490 204 143 5 274 472 299 498 1.17e-13 73.6
MS.gene94332.t1 MTR_0181s0030 25.514 243 170 6 200 441 234 466 1.63e-13 73.2
MS.gene94332.t1 MTR_3g057910 24.542 273 190 7 200 465 233 496 1.64e-13 73.2
MS.gene94332.t1 MTR_7g098550 22.667 450 287 13 33 467 97 500 1.83e-13 72.8
MS.gene94332.t1 MTR_5g070920 24.400 250 172 7 196 438 225 464 1.95e-13 72.8
MS.gene94332.t1 MTR_7g092620 23.768 345 228 11 120 452 160 481 2.09e-13 72.8
MS.gene94332.t1 MTR_4g088405 29.249 253 149 7 222 453 167 410 2.22e-13 72.4
MS.gene94332.t1 MTR_2g055430 27.000 200 134 4 274 471 328 517 2.29e-13 72.4
MS.gene94332.t1 MTR_5g021390 23.137 255 182 5 200 448 238 484 2.85e-13 72.4
MS.gene94332.t1 MTR_5g070840 33.871 124 73 4 322 441 21 139 3.27e-13 68.2
MS.gene94332.t1 MTR_1g035660 43.478 69 33 1 131 199 28 90 3.91e-13 67.0
MS.gene94332.t1 MTR_3g058110 23.483 379 256 17 78 448 124 476 3.93e-13 71.6
MS.gene94332.t1 MTR_2g072310 26.000 200 136 4 274 471 161 350 4.24e-13 70.9
MS.gene94332.t1 MTR_7g079440 26.259 278 172 11 39 304 230 486 4.80e-13 71.6
MS.gene94332.t1 MTR_4g088425 25.632 277 187 9 181 453 219 480 4.97e-13 71.6
MS.gene94332.t1 MTR_5g045770 24.286 420 258 17 48 448 89 467 5.57e-13 71.2
MS.gene94332.t1 MTR_7g056103 22.997 387 274 10 82 461 123 492 5.68e-13 71.2
MS.gene94332.t1 MTR_3g058210 23.529 374 247 15 78 441 123 467 6.14e-13 71.2
MS.gene94332.t1 MTR_4g089025 25.373 268 180 6 189 448 234 489 6.65e-13 71.2
MS.gene94332.t1 MTR_2g072380 22.857 350 234 12 131 471 28 350 1.11e-12 69.7
MS.gene94332.t1 MTR_4g089020 24.051 395 257 14 67 448 100 464 1.11e-12 70.5
MS.gene94332.t1 MTR_1g107295 22.957 257 181 6 200 448 238 485 1.11e-12 70.5
MS.gene94332.t1 MTR_3g058000 24.159 327 215 11 124 441 167 469 1.32e-12 70.1
MS.gene94332.t1 MTR_2g055470 26.500 200 135 4 274 471 328 517 1.48e-12 70.1
MS.gene94332.t1 MTR_4g025970 24.402 418 261 18 48 448 89 468 1.76e-12 69.7
MS.gene94332.t1 MTR_7g028020 23.720 371 235 15 93 446 132 471 1.96e-12 69.7
MS.gene94332.t1 MTR_2g062680 31.852 135 62 3 263 397 32 136 2.12e-12 66.2
MS.gene94332.t1 MTR_7g027960 23.181 371 237 14 93 446 132 471 2.12e-12 69.7
MS.gene94332.t1 MTR_2g072380 22.857 350 234 12 131 471 168 490 2.40e-12 69.3
MS.gene94332.t1 MTR_4g025980 27.451 204 141 4 245 448 271 467 2.55e-12 69.3
MS.gene94332.t1 MTR_5g095290 25.201 373 235 16 85 448 134 471 2.87e-12 68.9
MS.gene94332.t1 MTR_6g004570 37.838 111 60 4 207 309 3 112 4.11e-12 66.6
MS.gene94332.t1 MTR_4g104550 23.861 373 246 13 85 448 120 463 5.93e-12 68.2
MS.gene94332.t1 MTR_3g057860 27.014 211 138 7 264 467 296 497 7.84e-12 67.8
MS.gene94332.t1 MTR_8g469300 21.831 284 207 7 162 441 199 471 7.86e-12 67.8
MS.gene94332.t1 MTR_6g462640 23.364 428 279 19 37 448 78 472 1.50e-11 67.0
MS.gene94332.t1 MTR_8g076290 24.363 353 223 16 85 422 127 450 1.72e-11 66.6
MS.gene94332.t1 MTR_2g065360 21.485 377 259 12 78 445 92 440 2.54e-11 65.9
MS.gene94332.t1 MTR_2g072260 27.317 205 127 5 274 471 321 510 2.88e-11 65.9
MS.gene94332.t1 MTR_5g016410 24.828 290 176 14 195 468 233 496 3.14e-11 65.9
MS.gene94332.t1 MTR_0171s0010 28.962 183 112 7 269 445 308 478 3.96e-11 65.5
MS.gene94332.t1 MTR_5g094570 24.383 324 214 11 130 448 174 471 4.15e-11 65.5
MS.gene94332.t1 MTR_0638s0020 23.442 337 210 13 120 441 90 393 4.17e-11 65.1
MS.gene94332.t1 MTR_1g107300 24.000 175 126 4 275 449 7 174 4.88e-11 62.8
MS.gene94332.t1 MTR_7g092600 23.552 259 176 7 205 453 242 488 5.37e-11 65.1
MS.gene94332.t1 MTR_5g095260 24.403 377 234 15 85 448 134 472 7.12e-11 64.7
MS.gene94332.t1 MTR_5g009110 23.986 296 204 9 73 360 1 283 7.56e-11 63.5
MS.gene94332.t1 MTR_1g023720 26.201 229 161 5 220 448 262 482 8.81e-11 64.3
MS.gene94332.t1 MTR_4g095050 25.552 317 202 13 131 441 173 461 9.88e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94332.t1 AT2G23180 42.437 476 265 4 1 472 42 512 3.31e-139 410
MS.gene94332.t1 AT4G39490 42.916 487 256 7 1 474 41 518 1.80e-136 403
MS.gene94332.t1 AT1G57750 42.616 474 254 6 1 473 41 497 9.29e-135 398
MS.gene94332.t1 AT4G39480 41.127 479 253 5 11 474 51 515 6.18e-132 392
MS.gene94332.t1 AT4G39500 42.181 486 249 7 1 473 1 467 3.94e-130 385
MS.gene94332.t1 AT2G21910 42.412 481 258 7 1 474 40 508 8.90e-130 386
MS.gene94332.t1 AT4G39500 42.181 486 249 7 1 473 51 517 2.83e-129 385
MS.gene94332.t1 AT4G32170 41.300 477 264 5 1 473 40 504 9.90e-129 383
MS.gene94332.t1 AT1G47620 41.090 477 268 6 1 473 49 516 2.59e-126 377
MS.gene94332.t1 AT1G65340 40.084 474 268 5 1 471 42 502 3.12e-124 371
MS.gene94332.t1 AT5G52320 40.803 473 265 5 1 471 42 501 2.94e-122 366
MS.gene94332.t1 AT5G52320 40.598 468 263 5 1 466 42 496 4.16e-120 360
MS.gene94332.t1 AT4G39510 40.795 478 267 6 1 473 40 506 1.31e-118 357
MS.gene94332.t1 AT5G02900 39.583 480 253 10 1 473 31 480 2.61e-109 332
MS.gene94332.t1 AT5G23190 37.190 484 283 8 1 474 70 542 6.74e-105 323
MS.gene94332.t1 AT5G08250 37.045 494 269 12 1 474 9 480 4.36e-103 317
MS.gene94332.t1 AT5G08250 37.045 494 269 12 1 474 71 542 1.82e-102 317
MS.gene94332.t1 AT1G57750 40.399 401 221 6 1 400 41 424 2.24e-101 310
MS.gene94332.t1 AT1G63710 37.137 482 279 9 2 472 39 507 1.70e-100 311
MS.gene94332.t1 AT3G26125 36.157 484 277 10 12 474 62 534 5.41e-98 305
MS.gene94332.t1 AT1G24540 35.464 485 285 9 1 472 51 520 8.14e-97 301
MS.gene94332.t1 AT1G13140 35.331 484 292 9 1 474 54 526 1.75e-95 298
MS.gene94332.t1 AT1G13150 36.632 475 276 8 12 474 58 519 7.67e-95 296
MS.gene94332.t1 AT4G00360 35.197 483 291 9 2 472 39 511 9.58e-95 297
MS.gene94332.t1 AT2G45970 36.049 491 275 12 2 472 39 510 1.16e-94 296
MS.gene94332.t1 AT1G01600 35.438 491 281 11 2 472 39 513 2.57e-91 288
MS.gene94332.t1 AT5G58860 35.537 484 282 10 2 472 42 508 3.05e-90 284
MS.gene94332.t1 AT1G13140 34.091 484 272 9 1 474 54 500 1.35e-89 282
MS.gene94332.t1 AT1G34540 33.682 478 290 11 2 472 40 497 5.68e-83 265
MS.gene94332.t1 AT3G56630 32.845 478 297 10 2 473 40 499 2.56e-80 258
MS.gene94332.t1 AT2G27690 35.000 440 255 13 36 470 71 484 2.67e-79 255
MS.gene94332.t1 AT2G45510 32.068 474 287 11 5 465 50 501 7.51e-74 241
MS.gene94332.t1 AT5G63450 33.937 442 259 10 41 472 84 502 3.62e-73 239
MS.gene94332.t1 AT3G48520 32.127 442 268 10 41 473 82 500 6.07e-73 239
MS.gene94332.t1 AT5G63450 33.937 442 259 10 41 472 142 560 1.04e-72 240
MS.gene94332.t1 AT2G44890 32.829 463 286 12 11 465 56 501 8.76e-72 236
MS.gene94332.t1 AT3G01900 31.435 439 268 9 41 472 78 490 5.41e-68 226
MS.gene94332.t1 AT2G44890 31.385 462 276 11 11 465 56 483 6.61e-66 220
MS.gene94332.t1 AT1G69500 30.461 499 301 12 6 473 41 524 1.57e-61 209
MS.gene94332.t1 AT1G31800 26.058 449 289 18 39 473 151 570 1.78e-30 125
MS.gene94332.t1 AT3G53130 23.182 440 312 13 39 472 120 539 1.01e-26 113
MS.gene94332.t1 AT4G15110 22.622 473 311 16 40 473 123 579 1.80e-21 97.8
MS.gene94332.t1 AT2G26710 24.370 476 306 14 1 467 80 510 5.18e-21 96.3
MS.gene94332.t1 AT3G14640 24.416 471 289 18 13 464 84 506 3.23e-20 94.0
MS.gene94332.t1 AT3G14640 24.416 471 289 18 13 464 106 528 3.59e-20 94.0
MS.gene94332.t1 AT5G52400 30.870 230 148 5 239 467 295 514 1.34e-18 89.0
MS.gene94332.t1 AT1G01280 26.116 448 280 22 39 460 75 497 1.50e-18 88.6
MS.gene94332.t1 AT3G48300 25.086 291 185 9 185 467 212 477 1.55e-18 88.6
MS.gene94332.t1 AT3G48300 25.086 291 185 9 185 467 214 479 1.56e-18 88.6
MS.gene94332.t1 AT4G15350 29.339 242 146 9 245 474 276 504 2.24e-18 88.2
MS.gene94332.t1 AT5G06900 23.666 431 274 17 33 445 72 465 6.15e-18 86.7
MS.gene94332.t1 AT4G13310 26.515 264 165 8 184 441 221 461 7.37e-18 86.7
MS.gene94332.t1 AT3G48270 24.138 261 172 7 185 441 214 452 8.65e-18 86.3
MS.gene94332.t1 AT2G45560 24.533 375 251 12 82 448 128 478 3.20e-17 84.7
MS.gene94332.t1 AT5G57260 24.348 345 235 11 110 448 147 471 3.46e-17 84.3
MS.gene94332.t1 AT3G14610 25.328 458 283 21 22 464 91 504 4.83e-17 84.0
MS.gene94332.t1 AT3G20950 26.543 324 196 12 120 430 174 468 5.70e-17 84.0
MS.gene94332.t1 AT5G24900 26.794 209 143 5 262 469 208 407 5.89e-17 83.2
MS.gene94332.t1 AT3G61040 31.746 189 117 5 256 441 281 460 6.33e-17 83.6
MS.gene94332.t1 AT5G24950 22.788 373 252 10 77 441 116 460 9.25e-17 83.2
MS.gene94332.t1 AT5G24900 26.794 209 143 5 262 469 325 524 1.02e-16 83.2
MS.gene94332.t1 AT2G24180 25.468 267 185 6 200 465 238 491 1.03e-16 82.8
MS.gene94332.t1 AT3G14630 25.176 425 266 16 39 445 91 481 1.22e-16 82.8
MS.gene94332.t1 AT2G30770 23.656 372 247 10 85 448 125 467 1.26e-16 82.8
MS.gene94332.t1 AT3G14630 25.622 402 249 15 60 445 169 536 1.35e-16 82.8
MS.gene94332.t1 AT5G38450 29.469 207 134 5 262 467 316 511 3.58e-16 81.3
MS.gene94332.t1 AT3G20140 25.926 297 200 8 175 466 217 498 6.25e-16 80.5
MS.gene94332.t1 AT1G64940 24.658 219 158 3 256 472 295 508 8.64e-16 80.1
MS.gene94332.t1 AT4G13290 26.642 274 170 9 171 441 209 454 1.15e-15 79.7
MS.gene94332.t1 AT4G13770 22.438 361 249 9 95 448 134 470 1.55e-15 79.3
MS.gene94332.t1 AT3G14690 23.348 454 292 20 33 471 134 546 1.65e-15 79.3
MS.gene94332.t1 AT3G14690 23.348 454 292 20 33 471 99 511 1.77e-15 79.3
MS.gene94332.t1 AT3G48280 26.296 270 168 10 185 447 213 458 2.29e-15 79.0
MS.gene94332.t1 AT2G46960 22.616 451 285 17 41 469 106 514 2.46e-15 79.0
MS.gene94332.t1 AT2G46950 21.946 442 285 12 44 467 166 565 3.74e-15 78.2
MS.gene94332.t1 AT1G64950 24.201 219 159 3 256 472 294 507 3.75e-15 78.2
MS.gene94332.t1 AT3G03470 25.764 229 161 4 251 472 283 509 4.74e-15 77.8
MS.gene94332.t1 AT5G35715 30.688 189 115 5 267 451 234 410 5.62e-15 77.4
MS.gene94332.t1 AT5G24910 27.027 222 144 7 256 472 324 532 8.26e-15 77.0
MS.gene94332.t1 AT3G48310 22.989 261 175 8 185 441 215 453 1.13e-14 76.6
MS.gene94332.t1 AT4G27710 21.493 442 286 11 50 469 112 514 1.26e-14 76.6
MS.gene94332.t1 AT1G67110 30.872 149 96 3 320 467 363 505 2.25e-14 75.9
MS.gene94332.t1 AT2G46960 27.642 246 159 8 230 469 166 398 2.29e-14 75.1
MS.gene94332.t1 AT1G66030 34.375 128 75 3 1 127 48 167 2.30e-14 71.2
MS.gene94332.t1 AT2G22330 25.410 244 170 5 200 442 292 524 2.69e-14 75.5
MS.gene94332.t1 AT2G22330 25.461 271 180 8 200 459 269 528 2.72e-14 75.5
MS.gene94332.t1 AT4G39950 25.301 249 174 5 200 447 307 544 4.90e-14 74.7
MS.gene94332.t1 AT5G51900 33.846 130 81 2 183 307 3 132 5.20e-14 72.0
MS.gene94332.t1 AT4G39950 25.301 249 174 5 200 447 267 504 5.61e-14 74.7
MS.gene94332.t1 AT2G27010 23.559 399 253 14 90 474 126 486 5.68e-14 74.3
MS.gene94332.t1 AT3G20130 27.273 231 135 10 258 472 267 480 5.87e-14 74.3
MS.gene94332.t1 AT3G20130 27.273 231 135 10 258 472 295 508 7.99e-14 73.9
MS.gene94332.t1 AT5G47990 28.169 213 130 9 264 466 302 501 1.05e-13 73.6
MS.gene94332.t1 AT4G31950 25.000 280 194 9 196 469 231 500 1.20e-13 73.6
MS.gene94332.t1 AT3G25180 23.200 375 260 11 85 453 133 485 1.57e-13 73.2
MS.gene94332.t1 AT1G64930 27.670 206 137 8 274 473 311 510 3.63e-13 72.0
MS.gene94332.t1 AT1G01190 29.469 207 129 8 275 472 333 531 4.39e-13 71.6
MS.gene94332.t1 AT1G01190 29.469 207 129 8 275 472 338 536 4.67e-13 71.6
MS.gene94332.t1 AT4G31940 24.555 281 193 7 200 472 248 517 6.57e-13 71.2
MS.gene94332.t1 AT2G12190 23.611 216 156 4 256 467 294 504 6.64e-13 71.2
MS.gene94332.t1 AT3G26210 22.460 374 263 15 84 451 122 474 9.24e-13 70.9
MS.gene94332.t1 AT1G50560 22.802 364 250 13 111 466 165 505 9.94e-13 70.5
MS.gene94332.t1 AT3G14660 27.477 222 135 8 245 456 148 353 1.31e-12 69.7
MS.gene94332.t1 AT3G20935 23.453 307 181 9 202 474 50 336 1.83e-12 68.9
MS.gene94332.t1 AT3G20100 26.941 219 127 9 264 466 301 502 2.25e-12 69.3
MS.gene94332.t1 AT5G05260 22.251 382 259 13 84 448 135 495 2.30e-12 69.3
MS.gene94332.t1 AT3G26310 24.219 384 247 17 78 448 115 467 2.89e-12 68.9
MS.gene94332.t1 AT1G28430 25.078 319 203 11 169 474 214 509 3.44e-12 68.9
MS.gene94332.t1 AT4G12320 24.453 274 185 8 200 465 244 503 3.83e-12 68.9
MS.gene94332.t1 AT3G20090 27.184 206 121 9 263 456 164 352 4.12e-12 68.2
MS.gene94332.t1 AT4G31970 25.448 279 193 8 200 472 247 516 7.04e-12 67.8
MS.gene94332.t1 AT2G42250 25.688 218 144 7 245 453 281 489 7.18e-12 67.8
MS.gene94332.t1 AT1G33720 24.668 377 235 16 92 448 131 478 7.20e-12 67.8
MS.gene94332.t1 AT2G30750 27.746 173 120 2 269 441 293 460 1.01e-11 67.4
MS.gene94332.t1 AT1G13100 20.924 368 259 11 84 441 116 461 1.07e-11 67.4
MS.gene94332.t1 AT1G64900 25.773 194 131 6 288 473 317 505 1.12e-11 67.4
MS.gene94332.t1 AT1G74110 21.596 426 281 17 40 442 111 506 1.19e-11 67.4
MS.gene94332.t1 AT1G33720 28.421 190 121 7 263 448 193 371 1.40e-11 66.6
MS.gene94332.t1 AT3G48290 23.577 246 165 5 200 441 228 454 1.65e-11 66.6
MS.gene94332.t1 AT3G20090 26.540 211 126 9 258 456 297 490 1.83e-11 66.6
MS.gene94332.t1 AT1G11610 21.785 381 259 11 77 448 117 467 1.87e-11 66.6
MS.gene94332.t1 AT1G11610 21.785 381 259 11 77 448 117 467 2.04e-11 66.6
MS.gene94332.t1 AT1G33720 28.261 184 117 7 269 448 174 346 2.33e-11 65.9
MS.gene94332.t1 AT1G33720 28.261 184 117 7 269 448 174 346 2.33e-11 65.9
MS.gene94332.t1 AT1G33720 28.261 184 117 7 269 448 174 346 2.33e-11 65.9
MS.gene94332.t1 AT4G12300 21.851 389 271 13 84 462 133 498 2.43e-11 66.2
MS.gene94332.t1 AT1G66540 26.071 280 162 13 195 459 60 309 2.55e-11 65.1
MS.gene94332.t1 AT1G66540 26.071 280 162 13 195 459 119 368 2.78e-11 65.5
MS.gene94332.t1 AT2G14100 26.407 231 147 9 253 472 289 507 2.83e-11 66.2
MS.gene94332.t1 AT3G32047 26.545 275 172 12 163 428 206 459 2.98e-11 65.9
MS.gene94332.t1 AT5G42580 26.818 220 138 8 258 466 280 487 2.99e-11 65.9
MS.gene94332.t1 AT4G15360 30.636 173 102 6 262 428 299 459 3.01e-11 65.9
MS.gene94332.t1 AT5G67310 25.362 276 168 10 200 462 245 495 3.14e-11 65.9
MS.gene94332.t1 AT4G37370 26.641 259 136 10 186 438 241 451 3.34e-11 65.9
MS.gene94332.t1 AT3G14620 21.397 458 305 17 19 464 93 507 3.51e-11 65.9
MS.gene94332.t1 AT2G02580 23.077 273 183 8 182 448 217 468 7.82e-11 64.7
MS.gene94332.t1 AT3G26300 25.385 260 165 9 197 448 230 468 9.32e-11 64.3
MS.gene94332.t1 AT3G26180 25.112 223 145 7 233 448 131 338 9.73e-11 63.9

Find 96 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGCAAAATCATGAATTT+TGG 0.126723 1.3:+19878300 None:intergenic
GAATATATCAACTTTGTATT+TGG 0.131073 1.3:+19877236 None:intergenic
ACTATATTCCGAAATGTATT+TGG 0.181970 1.3:-19877778 MS.gene94332:CDS
CTAGCTGATATCCATCTTTC+AGG 0.223126 1.3:+19877155 None:intergenic
TAGCTTCGTTCAAATGAAAA+TGG 0.237406 1.3:-19877054 MS.gene94332:CDS
CAGGTCTATGTTGGTTCTTT+TGG 0.239145 1.3:-19877487 MS.gene94332:CDS
GATAAGCTTGTTTACCTTCA+TGG 0.240969 1.3:-19877356 MS.gene94332:CDS
AGCAAGAATTTCAATAACTA+TGG 0.243863 1.3:-19878169 MS.gene94332:CDS
AGAAAATCTTCACCAATTCT+TGG 0.244503 1.3:-19877702 MS.gene94332:CDS
ATAGAAGTTCGCAGGGTTAT+AGG 0.253074 1.3:+19876981 None:intergenic
CCTTTCTTGTTTCCATTCAT+TGG 0.253427 1.3:+19878084 None:intergenic
TCTTTCCCAATACAACTTCT+AGG 0.254383 1.3:+19877080 None:intergenic
TGGGAAGGATGCAAGAAATA+TGG 0.293743 1.3:-19877202 MS.gene94332:CDS
TCTTAGTGTACTTGAGGATA+TGG 0.319799 1.3:-19877813 MS.gene94332:CDS
CATGATCAAGAAATGGTAAT+AGG 0.333566 1.3:+19877981 None:intergenic
CACTTGTAAGGAAGACAATT+AGG 0.339623 1.3:+19877869 None:intergenic
TGTAGCTTCCAAATACATTT+CGG 0.350773 1.3:+19877770 None:intergenic
AGAACTAATGAAGGAAAGAT+TGG 0.355434 1.3:-19877588 MS.gene94332:CDS
TAGTAATCAAATTCTCCTTC+TGG 0.358726 1.3:+19877399 None:intergenic
TGGTTGCAGCTTCTTTGTTA+TGG 0.362107 1.3:-19877034 MS.gene94332:CDS
CTACAAAAGTGGCTAGAAAT+TGG 0.382292 1.3:-19877752 MS.gene94332:CDS
TAGAAGTTCGCAGGGTTATA+GGG 0.384922 1.3:+19876982 None:intergenic
AATCTCTTCGGTGCAGGAAA+TGG 0.385179 1.3:-19877521 MS.gene94332:CDS
TTATACATTTGTCCAAGAAT+TGG 0.390119 1.3:+19877690 None:intergenic
TCAATTTGGATTCCAATGAA+TGG 0.405780 1.3:-19878096 MS.gene94332:CDS
GATAACTCATTGCACTTGTA+AGG 0.413236 1.3:+19877857 None:intergenic
CCAGTGGAGGATATAGCCTT+AGG 0.418651 1.3:+19877318 None:intergenic
TCTATGATGTTTCAAAACTA+AGG 0.427539 1.3:+19878279 None:intergenic
TTGGATGCATGATCAAGAAA+TGG 0.427789 1.3:+19877974 None:intergenic
GTTATGGAAGTTTCGCATAC+AGG 0.429314 1.3:-19877018 MS.gene94332:CDS
GGGAAGGATGCAAGAAATAT+GGG 0.440749 1.3:-19877201 MS.gene94332:CDS
GAGGATGTGGTTCACATTCA+TGG 0.443215 1.3:+19878192 None:intergenic
CTGGTCCTAGAAGTTGTATT+GGG 0.444321 1.3:-19877085 MS.gene94332:CDS
TAGCCTTAGGGCTTCACATA+TGG 0.445709 1.3:+19877331 None:intergenic
GGAAATGGAACAATTAGTTC+AGG 0.447340 1.3:-19877506 MS.gene94332:CDS
TCGCATGAAACACGGCTTGA+AGG 0.452848 1.3:-19876952 MS.gene94332:CDS
ATATATTCTTTGTATGCAAT+GGG 0.455371 1.3:-19877221 MS.gene94332:CDS
CAATTAGTTCAGGTCTATGT+TGG 0.455448 1.3:-19877496 MS.gene94332:CDS
TGAAGGAAAGATTGGGAAAG+GGG 0.465441 1.3:-19877580 MS.gene94332:CDS
GCTGGTCCTAGAAGTTGTAT+TGG 0.465878 1.3:-19877086 MS.gene94332:CDS
GATATATTCTTTGTATGCAA+TGG 0.470734 1.3:-19877222 MS.gene94332:CDS
CCAATGAATGGAAACAAGAA+AGG 0.472348 1.3:-19878084 MS.gene94332:CDS
GCGGTCAATCTCTTCGGTGC+AGG 0.475937 1.3:-19877527 MS.gene94332:CDS
GACACTGCGGTCAATCTCTT+CGG 0.476458 1.3:-19877533 MS.gene94332:CDS
AGAAATTGGTCTAGAGAAGA+AGG 0.484494 1.3:-19877738 MS.gene94332:CDS
TGGAATTTAAGCCTGAAAGA+TGG 0.493373 1.3:-19877166 MS.gene94332:CDS
GAACTAATGAAGGAAAGATT+GGG 0.502084 1.3:-19877587 MS.gene94332:CDS
CCTGCTAAAAGAACTAATGA+AGG 0.516710 1.3:-19877597 MS.gene94332:CDS
GAAGTTTCGCATACAGGTGG+TGG 0.521177 1.3:-19877012 MS.gene94332:CDS
AGGATGTGGTTCACATTCAT+GGG 0.524583 1.3:+19878193 None:intergenic
ATCGAATCCAAATATAAAAG+TGG 0.526163 1.3:+19877892 None:intergenic
AATATGGGGAGATGATTGCT+TGG 0.529247 1.3:-19877186 MS.gene94332:CDS
CAGTGGAGGATATAGCCTTA+GGG 0.531778 1.3:+19877319 None:intergenic
TGAAATTCTTGCTGAGGATG+TGG 0.535302 1.3:+19878179 None:intergenic
GCAAGAATTTCAATAACTAT+GGG 0.540296 1.3:-19878168 MS.gene94332:CDS
GAAGGACAATAGAAGTTCGC+AGG 0.544586 1.3:+19876973 None:intergenic
CCTAAGGCTATATCCTCCAC+TGG 0.548516 1.3:-19877318 MS.gene94332:CDS
ATGAAGGAAAGATTGGGAAA+GGG 0.548698 1.3:-19877581 MS.gene94332:CDS
TGTTTCTAATCATCCAATTG+TGG 0.550451 1.3:-19877462 MS.gene94332:CDS
ATCACTAGTGAGGATAAAGT+TGG 0.551779 1.3:+19878216 None:intergenic
AAGTTCATAGCATTCAATGC+TGG 0.558235 1.3:-19877104 MS.gene94332:CDS
TCAAGCCGTGTTTCATGCGA+AGG 0.558257 1.3:+19876955 None:intergenic
AGTTATTGAAATTCTTGCTG+AGG 0.572402 1.3:+19878173 None:intergenic
AAAAGCTCTTAGTGTACTTG+AGG 0.573128 1.3:-19877819 MS.gene94332:CDS
AAAAGTGGAAGTAATATCAA+AGG 0.576832 1.3:+19877907 None:intergenic
ATTCTTTGTATGCAATGGGA+AGG 0.582664 1.3:-19877217 MS.gene94332:CDS
GAGCCATATGTGAAGCCCTA+AGG 0.584469 1.3:-19877334 MS.gene94332:CDS
GAAGGAAAGATTGGGAAAGG+GGG 0.584694 1.3:-19877579 MS.gene94332:CDS
GGACCAACATGTTCTCCACT+AGG 0.587114 1.3:+19877257 None:intergenic
ATTCAAAAGAAATGAAGATG+TGG 0.595144 1.3:-19877636 MS.gene94332:CDS
CAATGAATGGAAACAAGAAA+GGG 0.595232 1.3:-19878083 MS.gene94332:CDS
ATTGTCCTTCGCATGAAACA+CGG 0.595867 1.3:-19876960 MS.gene94332:CDS
AATTTCAATAACTATGGGAA+AGG 0.598284 1.3:-19878163 MS.gene94332:CDS
AATGAAGGAAAGATTGGGAA+AGG 0.599707 1.3:-19877582 MS.gene94332:CDS
GTATTTGGAAGCTACAAAAG+TGG 0.603221 1.3:-19877763 MS.gene94332:CDS
AGATGGATATCAGCTAGAGG+AGG 0.610321 1.3:-19877149 MS.gene94332:CDS
ATTTACAAGATGTTCTTGAG+AGG 0.615046 1.3:-19877934 MS.gene94332:CDS
TTGGCAATGTTTGTGAACCA+AGG 0.618453 1.3:+19878235 None:intergenic
CTTCACATATGGCTCCATGA+AGG 0.620978 1.3:+19877342 None:intergenic
AGATAACTGTCTATACCAGA+AGG 0.622324 1.3:-19877414 MS.gene94332:CDS
TTTCGCATACAGGTGGTGGA+AGG 0.623143 1.3:-19877008 MS.gene94332:CDS
AAATCTGATATACTACCTAG+TGG 0.629278 1.3:-19877272 MS.gene94332:CDS
GATGGATATCAGCTAGAGGA+GGG 0.629649 1.3:-19877148 MS.gene94332:CDS
TGGTCTAGAGAAGAAGGGCA+AGG 0.637408 1.3:-19877732 MS.gene94332:CDS
GAAATTGGTCTAGAGAAGAA+GGG 0.641770 1.3:-19877737 MS.gene94332:CDS
ATGGAAGTTTCGCATACAGG+TGG 0.641998 1.3:-19877015 MS.gene94332:CDS
GATTGGTTATGCAAAACTGA+TGG 0.646998 1.3:+19878322 None:intergenic
AAGGACAATAGAAGTTCGCA+GGG 0.649959 1.3:+19876974 None:intergenic
CTACCTAGTGGAGAACATGT+TGG 0.655277 1.3:-19877260 MS.gene94332:CDS
AATGCTATGAACTTGTAAGA+CGG 0.669512 1.3:+19877113 None:intergenic
CACTTGTGCTGAAATGCCAG+TGG 0.670771 1.3:+19877302 None:intergenic
CATTCATGGGATCACTAGTG+AGG 0.673773 1.3:+19878206 None:intergenic
GAAAGATGGATATCAGCTAG+AGG 0.675087 1.3:-19877152 MS.gene94332:CDS
GGAAGGATGCAAGAAATATG+GGG 0.682183 1.3:-19877200 MS.gene94332:CDS
TTGTGCTGAAATGCCAGTGG+AGG 0.723669 1.3:+19877305 None:intergenic
GAAGTATATCAGAGACACTG+CGG 0.787719 1.3:-19877546 MS.gene94332:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTCTTTGTATGCAAT+GGG - chr1.3:19878033-19878052 MS.gene94332:CDS 20.0%
!! GAATATATCAACTTTGTATT+TGG + chr1.3:19878021-19878040 None:intergenic 20.0%
!!! ATAGAATATCTCAATGTTTT+TGG + chr1.3:19877221-19877240 None:intergenic 20.0%
!!! ATTACTTCCACTTTTATATT+TGG - chr1.3:19877355-19877374 MS.gene94332:CDS 20.0%
! AAAAGTGGAAGTAATATCAA+AGG + chr1.3:19877350-19877369 None:intergenic 25.0%
! AATTTCAATAACTATGGGAA+AGG - chr1.3:19877091-19877110 MS.gene94332:CDS 25.0%
! ACTATATTCCGAAATGTATT+TGG - chr1.3:19877476-19877495 MS.gene94332:CDS 25.0%
! AGCAAGAATTTCAATAACTA+TGG - chr1.3:19877085-19877104 MS.gene94332:CDS 25.0%
! ATCGAATCCAAATATAAAAG+TGG + chr1.3:19877365-19877384 None:intergenic 25.0%
! ATTCAAAAGAAATGAAGATG+TGG - chr1.3:19877618-19877637 MS.gene94332:CDS 25.0%
! GATATATTCTTTGTATGCAA+TGG - chr1.3:19878032-19878051 MS.gene94332:CDS 25.0%
! GCAAGAATTTCAATAACTAT+GGG - chr1.3:19877086-19877105 MS.gene94332:CDS 25.0%
! TCTATGATGTTTCAAAACTA+AGG + chr1.3:19876978-19876997 None:intergenic 25.0%
! TTATACATTTGTCCAAGAAT+TGG + chr1.3:19877567-19877586 None:intergenic 25.0%
!! CAAAATCATGAATTTTGGAT+TGG + chr1.3:19876952-19876971 None:intergenic 25.0%
!!! ATCAAGTACTTCAACTTTTT+TGG + chr1.3:19877302-19877321 None:intergenic 25.0%
!!! TTAGTTTTGAAACATCATAG+AGG - chr1.3:19876977-19876996 MS.gene94332:CDS 25.0%
AAATCTGATATACTACCTAG+TGG - chr1.3:19877982-19878001 MS.gene94332:CDS 30.0%
AATGCTATGAACTTGTAAGA+CGG + chr1.3:19878144-19878163 None:intergenic 30.0%
AGAAAATCTTCACCAATTCT+TGG - chr1.3:19877552-19877571 MS.gene94332:CDS 30.0%
AGAACTAATGAAGGAAAGAT+TGG - chr1.3:19877666-19877685 MS.gene94332:CDS 30.0%
AGTTATTGAAATTCTTGCTG+AGG + chr1.3:19877084-19877103 None:intergenic 30.0%
ATTTACAAGATGTTCTTGAG+AGG - chr1.3:19877320-19877339 MS.gene94332:CDS 30.0%
CAATGAATGGAAACAAGAAA+GGG - chr1.3:19877171-19877190 MS.gene94332:CDS 30.0%
CATGATCAAGAAATGGTAAT+AGG + chr1.3:19877276-19877295 None:intergenic 30.0%
CGAGAATTTCAAAAATCTCA+CGG + chr1.3:19877126-19877145 None:intergenic 30.0%
GAACTAATGAAGGAAAGATT+GGG - chr1.3:19877667-19877686 MS.gene94332:CDS 30.0%
TAGCTTCGTTCAAATGAAAA+TGG - chr1.3:19878200-19878219 MS.gene94332:CDS 30.0%
TAGTAATCAAATTCTCCTTC+TGG + chr1.3:19877858-19877877 None:intergenic 30.0%
TCAATTTGGATTCCAATGAA+TGG - chr1.3:19877158-19877177 MS.gene94332:CDS 30.0%
TGTAGCTTCCAAATACATTT+CGG + chr1.3:19877487-19877506 None:intergenic 30.0%
! CTAGCTTCTTTTGAATGTTT+TGG + chr1.3:19877246-19877265 None:intergenic 30.0%
! GGTTGCAAAATCATGAATTT+TGG + chr1.3:19876957-19876976 None:intergenic 30.0%
! TGTTTCTAATCATCCAATTG+TGG - chr1.3:19877792-19877811 MS.gene94332:CDS 30.0%
!! AAATGCATCTTTTACTGACT+TGG + chr1.3:19878329-19878348 None:intergenic 30.0%
!!! AGAGGTACTTTTCAGTTTAA+AGG - chr1.3:19876995-19877014 MS.gene94332:CDS 30.0%
!!! ATGATTTTAGCTTCCACAAT+TGG + chr1.3:19877808-19877827 None:intergenic 30.0%
!!! ATTTTTGAAATTCTCGGTGT+TGG - chr1.3:19877130-19877149 MS.gene94332:CDS 30.0%
!!! CGTGAGATTTTTGAAATTCT+CGG - chr1.3:19877124-19877143 MS.gene94332:CDS 30.0%
AAAAGCTCTTAGTGTACTTG+AGG - chr1.3:19877435-19877454 MS.gene94332:CDS 35.0%
AAGTTCATAGCATTCAATGC+TGG - chr1.3:19878150-19878169 MS.gene94332:CDS 35.0%
AATGAAGGAAAGATTGGGAA+AGG - chr1.3:19877672-19877691 MS.gene94332:CDS 35.0%
AGATAACTGTCTATACCAGA+AGG - chr1.3:19877840-19877859 MS.gene94332:CDS 35.0%
ATCACTAGTGAGGATAAAGT+TGG + chr1.3:19877041-19877060 None:intergenic 35.0%
ATGAAGGAAAGATTGGGAAA+GGG - chr1.3:19877673-19877692 MS.gene94332:CDS 35.0%
ATTCTTTGTATGCAATGGGA+AGG - chr1.3:19878037-19878056 MS.gene94332:CDS 35.0%
CAATTAGTTCAGGTCTATGT+TGG - chr1.3:19877758-19877777 MS.gene94332:CDS 35.0%
CACTTGTAAGGAAGACAATT+AGG + chr1.3:19877388-19877407 None:intergenic 35.0%
CCAATGAATGGAAACAAGAA+AGG - chr1.3:19877170-19877189 MS.gene94332:CDS 35.0%
CCTGCTAAAAGAACTAATGA+AGG - chr1.3:19877657-19877676 MS.gene94332:CDS 35.0%
CTACAAAAGTGGCTAGAAAT+TGG - chr1.3:19877502-19877521 MS.gene94332:CDS 35.0%
GATAACTCATTGCACTTGTA+AGG + chr1.3:19877400-19877419 None:intergenic 35.0%
GGAAATGGAACAATTAGTTC+AGG - chr1.3:19877748-19877767 MS.gene94332:CDS 35.0%
GTATTTGGAAGCTACAAAAG+TGG - chr1.3:19877491-19877510 MS.gene94332:CDS 35.0%
TCTTAGTGTACTTGAGGATA+TGG - chr1.3:19877441-19877460 MS.gene94332:CDS 35.0%
TCTTTCCCAATACAACTTCT+AGG + chr1.3:19878177-19878196 None:intergenic 35.0%
TGGAATTTAAGCCTGAAAGA+TGG - chr1.3:19878088-19878107 MS.gene94332:CDS 35.0%
TTGGATGCATGATCAAGAAA+TGG + chr1.3:19877283-19877302 None:intergenic 35.0%
! AGAAATTGGTCTAGAGAAGA+AGG - chr1.3:19877516-19877535 MS.gene94332:CDS 35.0%
! CCTTTCTTGTTTCCATTCAT+TGG + chr1.3:19877173-19877192 None:intergenic 35.0%
! CTTTTCAGTTTAAAGGACCT+TGG - chr1.3:19877002-19877021 MS.gene94332:CDS 35.0%
! GAAATTGGTCTAGAGAAGAA+GGG - chr1.3:19877517-19877536 MS.gene94332:CDS 35.0%
! GATAAGCTTGTTTACCTTCA+TGG - chr1.3:19877898-19877917 MS.gene94332:CDS 35.0%
! GATTGGTTATGCAAAACTGA+TGG + chr1.3:19876935-19876954 None:intergenic 35.0%
!! CCTTCATTAGTTCTTTTAGC+AGG + chr1.3:19877660-19877679 None:intergenic 35.0%
!!! CGGTGTTGGTATTTTCAATT+TGG - chr1.3:19877144-19877163 MS.gene94332:CDS 35.0%
AAGGACAATAGAAGTTCGCA+GGG + chr1.3:19878283-19878302 None:intergenic 40.0%
AATATGGGGAGATGATTGCT+TGG - chr1.3:19878068-19878087 MS.gene94332:CDS 40.0%
AGGATGTGGTTCACATTCAT+GGG + chr1.3:19877064-19877083 None:intergenic 40.0%
ATAGAAGTTCGCAGGGTTAT+AGG + chr1.3:19878276-19878295 None:intergenic 40.0%
ATTGTCCTTCGCATGAAACA+CGG - chr1.3:19878294-19878313 MS.gene94332:CDS 40.0%
CTAGCTGATATCCATCTTTC+AGG + chr1.3:19878102-19878121 None:intergenic 40.0%
CTGGTCCTAGAAGTTGTATT+GGG - chr1.3:19878169-19878188 MS.gene94332:CDS 40.0%
GAAAGATGGATATCAGCTAG+AGG - chr1.3:19878102-19878121 MS.gene94332:CDS 40.0%
GAAGTATATCAGAGACACTG+CGG - chr1.3:19877708-19877727 MS.gene94332:CDS 40.0%
GGAAGGATGCAAGAAATATG+GGG - chr1.3:19878054-19878073 MS.gene94332:CDS 40.0%
GGGAAGGATGCAAGAAATAT+GGG - chr1.3:19878053-19878072 MS.gene94332:CDS 40.0%
GTTATGGAAGTTTCGCATAC+AGG - chr1.3:19878236-19878255 MS.gene94332:CDS 40.0%
TAGAAGTTCGCAGGGTTATA+GGG + chr1.3:19878275-19878294 None:intergenic 40.0%
TGAAATTCTTGCTGAGGATG+TGG + chr1.3:19877078-19877097 None:intergenic 40.0%
TGAAGGAAAGATTGGGAAAG+GGG - chr1.3:19877674-19877693 MS.gene94332:CDS 40.0%
TGGGAAGGATGCAAGAAATA+TGG - chr1.3:19878052-19878071 MS.gene94332:CDS 40.0%
TGGTTGCAGCTTCTTTGTTA+TGG - chr1.3:19878220-19878239 MS.gene94332:CDS 40.0%
TTGGCAATGTTTGTGAACCA+AGG + chr1.3:19877022-19877041 None:intergenic 40.0%
!!! CAGGTCTATGTTGGTTCTTT+TGG - chr1.3:19877767-19877786 MS.gene94332:CDS 40.0%
AGATGGATATCAGCTAGAGG+AGG - chr1.3:19878105-19878124 MS.gene94332:CDS 45.0%
ATGGAAGTTTCGCATACAGG+TGG - chr1.3:19878239-19878258 MS.gene94332:CDS 45.0%
CATTCATGGGATCACTAGTG+AGG + chr1.3:19877051-19877070 None:intergenic 45.0%
CTACCTAGTGGAGAACATGT+TGG - chr1.3:19877994-19878013 MS.gene94332:CDS 45.0%
CTTCACATATGGCTCCATGA+AGG + chr1.3:19877915-19877934 None:intergenic 45.0%
GAAGGAAAGATTGGGAAAGG+GGG - chr1.3:19877675-19877694 MS.gene94332:CDS 45.0%
GAAGGACAATAGAAGTTCGC+AGG + chr1.3:19878284-19878303 None:intergenic 45.0%
GAGGATGTGGTTCACATTCA+TGG + chr1.3:19877065-19877084 None:intergenic 45.0%
GATGGATATCAGCTAGAGGA+GGG - chr1.3:19878106-19878125 MS.gene94332:CDS 45.0%
GCTGGTCCTAGAAGTTGTAT+TGG - chr1.3:19878168-19878187 MS.gene94332:CDS 45.0%
! AATCTCTTCGGTGCAGGAAA+TGG - chr1.3:19877733-19877752 MS.gene94332:CDS 45.0%
! CAGTGGAGGATATAGCCTTA+GGG + chr1.3:19877938-19877957 None:intergenic 45.0%
! TAGCCTTAGGGCTTCACATA+TGG + chr1.3:19877926-19877945 None:intergenic 45.0%
CACTTGTGCTGAAATGCCAG+TGG + chr1.3:19877955-19877974 None:intergenic 50.0%
CCAGTGGAGGATATAGCCTT+AGG + chr1.3:19877939-19877958 None:intergenic 50.0%
CCTAAGGCTATATCCTCCAC+TGG - chr1.3:19877936-19877955 MS.gene94332:CDS 50.0%
GAAGTTTCGCATACAGGTGG+TGG - chr1.3:19878242-19878261 MS.gene94332:CDS 50.0%
GACACTGCGGTCAATCTCTT+CGG - chr1.3:19877721-19877740 MS.gene94332:CDS 50.0%
GAGCCATATGTGAAGCCCTA+AGG - chr1.3:19877920-19877939 MS.gene94332:CDS 50.0%
GGACCAACATGTTCTCCACT+AGG + chr1.3:19878000-19878019 None:intergenic 50.0%
TCAAGCCGTGTTTCATGCGA+AGG + chr1.3:19878302-19878321 None:intergenic 50.0%
TCGCATGAAACACGGCTTGA+AGG - chr1.3:19878302-19878321 MS.gene94332:CDS 50.0%
TGGTCTAGAGAAGAAGGGCA+AGG - chr1.3:19877522-19877541 MS.gene94332:CDS 50.0%
TTGTGCTGAAATGCCAGTGG+AGG + chr1.3:19877952-19877971 None:intergenic 50.0%
!! TTTCGCATACAGGTGGTGGA+AGG - chr1.3:19878246-19878265 MS.gene94332:CDS 50.0%
! GCGGTCAATCTCTTCGGTGC+AGG - chr1.3:19877727-19877746 MS.gene94332:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 19876926 19878350 19876926 ID=MS.gene94332
chr1.3 mRNA 19876926 19878350 19876926 ID=MS.gene94332.t1;Parent=MS.gene94332
chr1.3 exon 19876926 19878350 19876926 ID=MS.gene94332.t1.exon1;Parent=MS.gene94332.t1
chr1.3 CDS 19876926 19878350 19876926 ID=cds.MS.gene94332.t1;Parent=MS.gene94332.t1
Gene Sequence

>MS.gene94332

ATGCTACCATCAGTTTTGCATAACCAATCCAAAATTCATGATTTTGCAACCTTAGTTTTGAAACATCATAGAGGTACTTTTCAGTTTAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACTAGTGATCCCATGAATGTGAACCACATCCTCAGCAAGAATTTCAATAACTATGGGAAAGGATATGATTTCCGTGAGATTTTTGAAATTCTCGGTGTTGGTATTTTCAATTTGGATTCCAATGAATGGAAACAAGAAAGGGCACTATTTCATTCATTGCTCAAAACCAAAAACATTGAGATATTCTATCACCAAAACATTCAAAAGAAGCTAGAGAATTGCCTATTACCATTTCTTGATCATGCATCCAAAAAAGTTGAAGTACTTGATTTACAAGATGTTCTTGAGAGGTTTACCTTTGATATTACTTCCACTTTTATATTTGGATTCGATCCTAATTGTCTTCCTTACAAGTGCAATGAGTTATCAGATATTGCTTATGAAAAAGCTCTTAGTGTACTTGAGGATATGGTATTGTGTAGACACTATATTCCGAAATGTATTTGGAAGCTACAAAAGTGGCTAGAAATTGGTCTAGAGAAGAAGGGCAAGGAAGCTAAAGAAAATCTTCACCAATTCTTGGACAAATGTATAACTGATTACAAAAGTGATGAAGATAGAAGAATATTCAAAAGAAATGAAGATGTGGATGAATCTCGTTATTGCCTGCTAAAAGAACTAATGAAGGAAAGATTGGGAAAGGGGGAAATGATTGAGAAGTATATCAGAGACACTGCGGTCAATCTCTTCGGTGCAGGAAATGGAACAATTAGTTCAGGTCTATGTTGGTTCTTTTGGCTTGTTTCTAATCATCCAATTGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAACTGTCTATACCAGAAGGAGAATTTGATTACTAACTTAAGTGTGAAAGAGCTTGATAAGCTTGTTTACCTTCATGGAGCCATATGTGAAGCCCTAAGGCTATATCCTCCACTGGCATTTCAGCACAAGTGTGCTATCAAATCTGATATACTACCTAGTGGAGAACATGTTGGTCCAAATACAAAGTTGATATATTCTTTGTATGCAATGGGAAGGATGCAAGAAATATGGGGAGATGATTGCTTGGAATTTAAGCCTGAAAGATGGATATCAGCTAGAGGAGGGATTATACATGTACCGTCTTACAAGTTCATAGCATTCAATGCTGGTCCTAGAAGTTGTATTGGGAAAGATCTTAGCTTCGTTCAAATGAAAATGGTTGCAGCTTCTTTGTTATGGAAGTTTCGCATACAGGTGGTGGAAGGTCACCCTATAACCCTGCGAACTTCTATTGTCCTTCGCATGAAACACGGCTTGAAGGTCCAAGTCAGTAAAAGATGCATTTGA

Protein sequence

>MS.gene94332.t1

MLPSVLHNQSKIHDFATLVLKHHRGTFQFKGPWFTNIANFILTSDPMNVNHILSKNFNNYGKGYDFREIFEILGVGIFNLDSNEWKQERALFHSLLKTKNIEIFYHQNIQKKLENCLLPFLDHASKKVEVLDLQDVLERFTFDITSTFIFGFDPNCLPYKCNELSDIAYEKALSVLEDMVLCRHYIPKCIWKLQKWLEIGLEKKGKEAKENLHQFLDKCITDYKSDEDRRIFKRNEDVDESRYCLLKELMKERLGKGEMIEKYIRDTAVNLFGAGNGTISSGLCWFFWLVSNHPIVEAKIIQEIKDNCLYQKENLITNLSVKELDKLVYLHGAICEALRLYPPLAFQHKCAIKSDILPSGEHVGPNTKLIYSLYAMGRMQEIWGDDCLEFKPERWISARGGIIHVPSYKFIAFNAGPRSCIGKDLSFVQMKMVAASLLWKFRIQVVEGHPITLRTSIVLRMKHGLKVQVSKRCI