AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067183


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067183.t1 MTR_1g035670 87.768 466 56 1 1 465 39 504 0.0 855
MS.gene067183.t1 MTR_1g036130 83.404 470 73 3 1 465 39 508 0.0 802
MS.gene067183.t1 MTR_1g035760 82.618 466 57 2 1 465 39 481 0.0 779
MS.gene067183.t1 MTR_1g035860 83.005 406 69 0 1 406 45 450 0.0 707
MS.gene067183.t1 MTR_1g036010 70.551 472 131 5 1 465 39 509 0.0 697
MS.gene067183.t1 MTR_1g035940 69.280 472 137 5 1 465 39 509 0.0 684
MS.gene067183.t1 MTR_1g035830 69.851 471 136 4 1 465 39 509 0.0 679
MS.gene067183.t1 MTR_1g069715 74.201 407 98 4 46 445 1 407 0.0 631
MS.gene067183.t1 MTR_1g035750 63.617 470 166 3 1 465 38 507 0.0 625
MS.gene067183.t1 MTR_1g035580 62.579 473 158 5 1 465 37 498 0.0 609
MS.gene067183.t1 MTR_1g035790 60.684 468 180 4 1 465 38 504 0.0 600
MS.gene067183.t1 MTR_1g050362 61.099 473 174 6 1 464 36 507 0.0 600
MS.gene067183.t1 MTR_1g036200 61.522 473 167 6 1 465 36 501 0.0 591
MS.gene067183.t1 MTR_1g036270 59.833 478 177 9 1 465 38 513 0.0 577
MS.gene067183.t1 MTR_1g035800 59.368 475 181 6 1 463 38 512 0.0 560
MS.gene067183.t1 MTR_7g033580 54.487 468 201 5 1 465 38 496 0.0 527
MS.gene067183.t1 MTR_8g088470 53.333 465 208 4 1 463 34 491 0.0 524
MS.gene067183.t1 MTR_7g033570 52.778 468 209 5 1 465 38 496 2.49e-180 514
MS.gene067183.t1 MTR_6g004670 49.893 467 227 4 1 463 42 505 2.99e-169 486
MS.gene067183.t1 MTR_6g004610 49.785 466 226 5 1 462 1 462 3.81e-164 472
MS.gene067183.t1 MTR_6g004630 49.680 469 228 5 1 465 41 505 3.97e-164 473
MS.gene067183.t1 MTR_6g004600 47.917 480 231 6 1 465 42 517 3.00e-159 461
MS.gene067183.t1 MTR_6g004590 47.292 480 234 6 1 465 42 517 2.77e-157 456
MS.gene067183.t1 MTR_1g037560 40.041 482 262 12 1 464 72 544 2.40e-120 363
MS.gene067183.t1 MTR_1g037550 39.085 481 272 9 1 464 72 548 1.66e-117 355
MS.gene067183.t1 MTR_4g075110 39.540 478 267 10 1 463 79 549 1.97e-117 355
MS.gene067183.t1 MTR_4g012320 60.274 219 86 1 248 465 7 225 6.25e-98 293
MS.gene067183.t1 MTR_8g098435 35.774 478 280 9 2 463 39 505 1.70e-92 290
MS.gene067183.t1 MTR_5g070010 35.368 475 278 8 2 458 40 503 1.23e-91 287
MS.gene067183.t1 MTR_8g030590 35.197 483 281 10 2 463 39 510 2.03e-89 283
MS.gene067183.t1 MTR_3g463060 35.518 473 269 11 2 458 45 497 1.71e-86 274
MS.gene067183.t1 MTR_7g096340 35.388 438 257 13 37 464 82 503 3.18e-82 263
MS.gene067183.t1 MTR_1g070365 35.512 459 267 12 16 463 64 504 6.79e-81 259
MS.gene067183.t1 MTR_1g070345 34.562 434 257 11 42 464 88 505 5.33e-79 254
MS.gene067183.t1 MTR_3g080580 34.216 453 250 13 40 464 86 518 3.36e-78 253
MS.gene067183.t1 MTR_8g035860 34.328 469 287 12 6 463 51 509 4.35e-78 252
MS.gene067183.t1 MTR_7g096320 34.475 438 261 13 37 464 83 504 4.40e-78 252
MS.gene067183.t1 MTR_8g035820 35.797 433 261 10 42 463 83 509 6.19e-77 249
MS.gene067183.t1 MTR_7g088330 34.862 436 260 10 40 463 85 508 6.41e-77 249
MS.gene067183.t1 MTR_8g035810 35.335 433 263 10 42 463 84 510 6.98e-77 249
MS.gene067183.t1 MTR_8g035780 34.169 439 266 10 40 464 82 511 4.38e-74 242
MS.gene067183.t1 MTR_5g019140 31.947 457 274 10 37 464 83 531 6.04e-74 242
MS.gene067183.t1 MTR_7g029275 33.867 437 262 14 40 463 86 508 5.31e-73 239
MS.gene067183.t1 MTR_4g054920 32.962 449 249 12 42 463 93 516 9.28e-73 238
MS.gene067183.t1 MTR_4g119660 31.510 457 276 10 37 464 68 516 1.12e-72 238
MS.gene067183.t1 MTR_2g086040 32.653 441 252 11 8 436 63 470 3.49e-69 229
MS.gene067183.t1 MTR_1g060550 32.688 413 238 9 40 436 93 481 4.79e-69 229
MS.gene067183.t1 MTR_8g035760 32.333 433 275 9 40 463 88 511 1.14e-68 228
MS.gene067183.t1 MTR_8g035680 32.110 436 273 11 40 463 88 512 1.17e-67 225
MS.gene067183.t1 MTR_1g102220 31.891 439 278 11 36 463 78 506 2.21e-67 224
MS.gene067183.t1 MTR_7g406990 35.447 347 211 8 1 339 55 396 2.48e-64 214
MS.gene067183.t1 MTR_8g035810 33.600 375 234 8 42 407 84 452 9.83e-61 205
MS.gene067183.t1 MTR_6g084040 63.014 146 35 2 1 145 38 165 8.13e-58 188
MS.gene067183.t1 MTR_1g050590 79.310 116 24 0 212 327 3 118 1.65e-57 186
MS.gene067183.t1 MTR_8g035680 31.806 371 232 9 104 463 5 365 8.96e-54 184
MS.gene067183.t1 MTR_1g040110 70.270 111 33 0 88 198 57 167 1.83e-51 172
MS.gene067183.t1 MTR_1g036140 80.000 95 19 0 214 308 69 163 6.06e-46 157
MS.gene067183.t1 MTR_8g035810 31.803 305 194 7 42 337 84 383 4.32e-40 149
MS.gene067183.t1 MTR_1g070370 34.902 255 146 5 131 382 5 242 6.36e-39 141
MS.gene067183.t1 MTR_1g102210 30.435 345 195 11 130 463 51 361 8.65e-37 139
MS.gene067183.t1 MTR_7g079440 25.163 461 295 17 23 463 218 648 2.17e-30 125
MS.gene067183.t1 MTR_1g062190 24.508 457 310 15 20 463 105 539 1.48e-28 118
MS.gene067183.t1 MTR_3g093530 24.877 406 278 11 58 456 132 517 7.26e-27 113
MS.gene067183.t1 MTR_5g009110 24.033 491 304 16 22 464 102 571 3.87e-25 108
MS.gene067183.t1 MTR_1g035660 48.673 113 42 2 123 235 21 117 9.59e-25 99.8
MS.gene067183.t1 MTR_7g079440 25.654 382 237 14 23 387 218 569 8.91e-24 104
MS.gene067183.t1 MTR_7g006900 23.632 402 258 15 71 458 101 467 1.11e-22 100
MS.gene067183.t1 MTR_0025s0110 22.148 447 309 16 21 456 101 519 3.51e-22 99.8
MS.gene067183.t1 MTR_6g017325 22.646 393 273 10 71 458 136 502 2.40e-21 97.1
MS.gene067183.t1 MTR_8g035790 46.465 99 50 2 368 464 1 98 4.22e-21 88.2
MS.gene067183.t1 MTR_1g101040 23.399 406 278 14 59 456 128 508 6.45e-21 95.9
MS.gene067183.t1 MTR_0147s0030 22.432 477 313 15 9 462 88 530 8.97e-21 95.5
MS.gene067183.t1 MTR_5g009110 24.036 441 269 15 72 464 1 423 1.27e-20 94.4
MS.gene067183.t1 MTR_6g072490 23.111 450 299 18 21 456 90 506 6.28e-20 92.8
MS.gene067183.t1 MTR_2g010250 28.916 249 165 7 225 464 261 506 1.03e-19 92.0
MS.gene067183.t1 MTR_8g046580 46.154 91 48 1 343 433 197 286 1.07e-19 89.7
MS.gene067183.t1 MTR_2g010320 26.393 341 237 9 131 463 169 503 1.20e-19 92.0
MS.gene067183.t1 MTR_8g012585 24.797 246 174 6 201 442 188 426 5.77e-19 89.4
MS.gene067183.t1 MTR_1g085680 22.595 447 291 16 33 458 99 511 6.28e-19 89.7
MS.gene067183.t1 MTR_2g010380 28.862 246 167 6 225 463 265 509 9.61e-19 89.0
MS.gene067183.t1 MTR_5g070690 27.197 239 159 4 199 429 231 462 1.27e-18 88.6
MS.gene067183.t1 MTR_5g070800 27.197 239 159 4 199 429 231 462 1.27e-18 88.6
MS.gene067183.t1 MTR_2g010330 28.629 248 165 7 225 463 263 507 2.11e-18 88.2
MS.gene067183.t1 MTR_1g101050 26.515 264 173 8 202 456 253 504 2.26e-18 88.2
MS.gene067183.t1 MTR_7g098550 25.000 448 287 15 23 458 90 500 2.54e-18 87.8
MS.gene067183.t1 MTR_5g070920 26.068 234 163 4 199 427 233 461 3.13e-18 87.4
MS.gene067183.t1 MTR_8g008530 23.325 403 273 14 71 462 141 518 3.31e-18 87.4
MS.gene067183.t1 MTR_2g062670 29.612 206 115 6 111 307 49 233 4.82e-18 87.0
MS.gene067183.t1 MTR_2g062670 26.444 329 153 11 55 360 189 451 2.90e-15 78.2
MS.gene067183.t1 MTR_5g009110 25.000 352 225 11 22 354 102 433 4.83e-18 86.7
MS.gene067183.t1 MTR_2g023680 23.855 415 260 13 67 458 132 513 6.52e-18 86.7
MS.gene067183.t1 MTR_7g055793 20.950 463 306 14 21 462 45 468 6.87e-18 86.3
MS.gene067183.t1 MTR_6g008620 23.214 392 265 13 34 412 100 468 8.57e-18 86.3
MS.gene067183.t1 MTR_2g072270 23.941 472 297 19 8 458 88 518 9.01e-18 86.3
MS.gene067183.t1 MTR_7g098550 24.444 450 279 15 23 458 90 492 1.04e-17 85.9
MS.gene067183.t1 MTR_8g098565 28.829 222 150 5 249 463 286 506 1.24e-17 85.9
MS.gene067183.t1 MTR_6g008500 25.630 238 160 6 199 427 264 493 1.92e-17 85.1
MS.gene067183.t1 MTR_6g008640 25.187 401 263 13 62 450 130 505 3.30e-17 84.3
MS.gene067183.t1 MTR_0181s0030 25.278 360 247 11 84 436 126 470 4.16e-17 84.0
MS.gene067183.t1 MTR_2g010290 29.464 224 144 7 249 463 314 532 5.71e-17 83.6
MS.gene067183.t1 MTR_6g008650 24.566 403 265 12 62 450 130 507 7.43e-17 83.6
MS.gene067183.t1 MTR_4g104610 22.689 357 250 11 84 429 120 461 8.01e-17 83.2
MS.gene067183.t1 MTR_8g104030 27.984 243 153 7 199 429 8 240 1.04e-16 80.9
MS.gene067183.t1 MTR_6g008430 29.317 249 164 8 185 432 241 478 1.34e-16 82.4
MS.gene067183.t1 MTR_8g042000 22.717 449 302 15 21 455 99 516 1.39e-16 82.4
MS.gene067183.t1 MTR_5g070830 24.896 241 162 6 199 429 343 574 1.79e-16 82.4
MS.gene067183.t1 MTR_8g469360 22.018 436 291 13 44 462 20 423 2.08e-16 81.6
MS.gene067183.t1 MTR_4g018800 23.150 419 271 15 34 432 98 485 2.24e-16 82.0
MS.gene067183.t1 MTR_6g008530 24.153 236 167 4 199 427 257 487 2.89e-16 81.6
MS.gene067183.t1 MTR_5g034900 27.727 220 151 6 249 463 301 517 4.70e-16 80.9
MS.gene067183.t1 MTR_1g015860 29.817 218 133 7 256 464 323 529 5.19e-16 80.9
MS.gene067183.t1 MTR_4g113650 21.983 464 323 13 5 458 80 514 5.20e-16 80.9
MS.gene067183.t1 MTR_4g071710 30.159 252 148 10 199 429 229 473 5.83e-16 80.5
MS.gene067183.t1 MTR_2g061200 22.931 423 292 12 58 462 122 528 6.18e-16 80.5
MS.gene067183.t1 MTR_2g065360 23.249 357 236 11 84 427 99 430 1.25e-15 79.3
MS.gene067183.t1 MTR_5g070710 24.895 237 161 5 199 427 232 459 1.91e-15 79.0
MS.gene067183.t1 MTR_3g014880 24.603 252 177 6 199 442 254 500 2.25e-15 79.0
MS.gene067183.t1 MTR_1g091003 25.436 401 254 16 39 429 90 455 2.30e-15 78.6
MS.gene067183.t1 MTR_2g061750 28.571 189 111 4 38 209 13 194 2.38e-15 75.1
MS.gene067183.t1 MTR_4g094775 27.778 234 143 7 201 429 241 453 2.45e-15 78.6
MS.gene067183.t1 MTR_5g091760 25.000 216 153 5 203 418 226 432 2.49e-15 78.6
MS.gene067183.t1 MTR_8g042060 21.842 467 305 18 13 458 92 519 2.57e-15 78.6
MS.gene067183.t1 MTR_2g061740 28.571 189 111 4 38 209 13 194 2.88e-15 74.7
MS.gene067183.t1 MTR_8g042020 24.014 279 181 9 196 458 255 518 3.39e-15 78.2
MS.gene067183.t1 MTR_6g008600 25.000 240 166 6 199 432 256 487 3.49e-15 78.2
MS.gene067183.t1 MTR_4g088420 31.319 182 118 4 263 442 30 206 4.66e-15 75.1
MS.gene067183.t1 MTR_1g022040 22.398 442 291 15 32 458 94 498 5.91e-15 77.4
MS.gene067183.t1 MTR_8g042060 23.596 267 175 8 209 458 229 483 5.93e-15 77.4
MS.gene067183.t1 MTR_6g042540 25.600 250 176 7 199 442 247 492 7.18e-15 77.0
MS.gene067183.t1 MTR_0171s0020 27.778 216 148 5 223 436 267 476 7.77e-15 77.0
MS.gene067183.t1 MTR_2g010280 29.545 220 149 5 249 463 285 503 1.01e-14 76.6
MS.gene067183.t1 MTR_5g070700 25.316 237 162 5 199 427 233 462 1.18e-14 76.6
MS.gene067183.t1 MTR_6g084770 26.778 239 153 7 201 429 239 465 1.55e-14 76.3
MS.gene067183.t1 MTR_4g088195 21.053 380 242 13 91 440 127 478 1.95e-14 75.9
MS.gene067183.t1 MTR_4g088425 29.719 249 161 7 199 442 239 478 2.02e-14 75.9
MS.gene067183.t1 MTR_4g095050 26.840 231 154 4 199 429 242 457 2.10e-14 75.9
MS.gene067183.t1 MTR_6g022450 26.733 202 139 4 217 414 261 457 2.22e-14 75.5
MS.gene067183.t1 MTR_8g104100 29.121 182 115 4 252 429 50 221 2.40e-14 73.6
MS.gene067183.t1 MTR_2g072340 21.806 454 305 18 19 455 88 508 2.57e-14 75.5
MS.gene067183.t1 MTR_3g104560 27.899 276 168 10 203 464 144 402 2.81e-14 74.7
MS.gene067183.t1 MTR_5g070840 31.159 138 90 2 294 429 1 135 3.00e-14 71.2
MS.gene067183.t1 MTR_2g062680 33.333 135 61 1 256 390 32 137 3.49e-14 71.2
MS.gene067183.t1 MTR_6g084900 22.979 235 162 5 205 429 2 227 4.23e-14 72.8
MS.gene067183.t1 MTR_7g103450 27.826 230 150 6 210 429 254 477 5.47e-14 74.3
MS.gene067183.t1 MTR_7g079440 24.399 291 182 10 23 297 218 486 6.22e-14 74.3
MS.gene067183.t1 MTR_4g088400 27.823 248 166 7 199 442 256 494 7.05e-14 73.9
MS.gene067183.t1 MTR_4g104540 23.563 348 226 14 130 461 104 427 7.42e-14 73.6
MS.gene067183.t1 MTR_3g104560 27.273 275 171 9 203 464 279 537 7.46e-14 73.9
MS.gene067183.t1 MTR_6g042610 26.432 227 155 6 199 419 247 467 9.35e-14 73.6
MS.gene067183.t1 MTR_8g036185 27.442 215 140 5 234 438 280 488 1.45e-13 73.2
MS.gene067183.t1 MTR_5g070850 23.013 239 169 5 199 429 233 464 1.49e-13 73.2
MS.gene067183.t1 MTR_5g009110 25.166 302 190 10 72 354 1 285 1.86e-13 71.6
MS.gene067183.t1 MTR_3g025260 23.985 271 185 9 167 429 209 466 8.41e-13 70.9
MS.gene067183.t1 MTR_2g437840 26.695 236 143 9 201 429 241 453 9.12e-13 70.5
MS.gene067183.t1 MTR_5g470730 25.000 200 136 4 199 390 233 426 9.79e-13 70.1
MS.gene067183.t1 MTR_8g076290 25.339 221 150 5 203 414 236 450 1.28e-12 70.1
MS.gene067183.t1 MTR_4g077210 28.571 224 143 8 199 418 241 451 1.50e-12 70.1
MS.gene067183.t1 MTR_7g075610 29.609 179 119 5 262 439 302 474 1.52e-12 69.7
MS.gene067183.t1 MTR_5g018500 26.923 156 107 4 276 429 4 154 1.73e-12 66.6
MS.gene067183.t1 MTR_3g024520 25.237 317 201 14 130 429 169 466 1.77e-12 69.7
MS.gene067183.t1 MTR_6g004570 34.951 103 54 2 206 295 3 105 1.78e-12 67.8
MS.gene067183.t1 MTR_2g010300 26.457 223 140 7 249 464 285 490 2.09e-12 69.3
MS.gene067183.t1 MTR_1g069200 22.932 266 194 6 194 456 248 505 2.33e-12 69.3
MS.gene067183.t1 MTR_4g088160 20.267 375 243 13 91 436 127 474 2.73e-12 69.3
MS.gene067183.t1 MTR_4g088405 33.333 183 115 4 262 442 231 408 3.12e-12 68.6
MS.gene067183.t1 MTR_5g070973 28.244 131 93 1 297 427 4 133 3.60e-12 65.5
MS.gene067183.t1 MTR_4g109470 22.368 456 290 18 4 429 42 463 3.70e-12 68.6
MS.gene067183.t1 MTR_6g084060 67.568 37 12 0 19 55 17 53 4.20e-12 61.2
MS.gene067183.t1 MTR_1g103670 21.143 350 238 11 81 418 123 446 4.48e-12 68.6
MS.gene067183.t1 MTR_5g094550 24.199 281 186 9 172 439 205 471 6.08e-12 68.2
MS.gene067183.t1 MTR_1g107295 21.914 324 205 12 130 429 175 474 6.27e-12 68.2
MS.gene067183.t1 MTR_4g104550 24.351 308 205 11 130 429 165 452 7.22e-12 67.8
MS.gene067183.t1 MTR_4g104660 22.928 362 237 15 84 429 138 473 7.39e-12 67.8
MS.gene067183.t1 MTR_5g095230 20.889 450 295 19 33 458 97 509 7.72e-12 67.8
MS.gene067183.t1 MTR_3g025230 23.485 396 258 17 55 429 95 466 1.22e-11 67.0
MS.gene067183.t1 MTR_5g007450 24.878 205 146 5 236 439 271 468 1.25e-11 67.0
MS.gene067183.t1 MTR_2g072260 20.459 479 314 20 8 458 67 506 1.29e-11 67.0
MS.gene067183.t1 MTR_5g095290 23.404 376 230 17 84 439 134 471 1.59e-11 66.6
MS.gene067183.t1 MTR_7g056103 21.914 324 228 9 119 429 157 468 1.75e-11 66.6
MS.gene067183.t1 MTR_4g088170 20.942 382 242 14 91 440 127 480 1.89e-11 66.6
MS.gene067183.t1 MTR_4g104570 26.442 208 131 7 264 461 1 196 1.89e-11 63.5
MS.gene067183.t1 MTR_3g436540 24.206 252 173 7 184 429 230 469 1.90e-11 66.6
MS.gene067183.t1 MTR_1g031700 20.994 362 253 11 81 432 123 461 1.91e-11 66.2
MS.gene067183.t1 MTR_2g072250 21.854 453 281 18 33 455 97 506 2.00e-11 66.2
MS.gene067183.t1 MTR_4g035330 23.011 352 232 12 84 429 123 441 2.36e-11 66.2
MS.gene067183.t1 MTR_5g007550 24.227 194 140 4 236 429 271 457 2.40e-11 66.2
MS.gene067183.t1 MTR_5g007460 23.590 195 142 4 236 429 248 436 2.49e-11 65.9
MS.gene067183.t1 MTR_7g012330 25.564 266 169 11 184 439 224 470 2.65e-11 65.9
MS.gene067183.t1 MTR_5g094560 26.337 243 148 10 200 429 236 460 2.66e-11 65.9
MS.gene067183.t1 MTR_6g084090 65.000 40 14 0 244 283 11 50 2.98e-11 58.9
MS.gene067183.t1 MTR_2g450040 27.950 161 109 5 294 450 341 498 4.11e-11 65.5
MS.gene067183.t1 MTR_1g107300 25.595 168 117 5 264 429 1 162 4.36e-11 62.8
MS.gene067183.t1 MTR_4g062500 23.673 245 166 8 199 429 235 472 4.58e-11 65.5
MS.gene067183.t1 MTR_3g057970 25.837 209 136 7 226 429 257 451 6.04e-11 64.7
MS.gene067183.t1 MTR_1g035140 27.155 232 143 10 210 429 243 460 6.63e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067183.t1 AT4G39490 42.650 483 254 6 1 465 41 518 4.73e-139 409
MS.gene067183.t1 AT4G39500 43.882 474 249 5 1 464 1 467 1.42e-138 406
MS.gene067183.t1 AT4G39500 43.882 474 249 5 1 464 51 517 7.36e-138 406
MS.gene067183.t1 AT4G32170 43.312 471 254 5 1 464 40 504 1.77e-137 405
MS.gene067183.t1 AT2G23180 42.647 476 255 4 1 463 42 512 2.43e-136 402
MS.gene067183.t1 AT4G39480 42.128 470 256 4 9 465 49 515 8.54e-133 393
MS.gene067183.t1 AT2G21910 41.474 475 262 6 1 465 40 508 3.82e-129 384
MS.gene067183.t1 AT1G47620 40.381 473 268 6 1 464 49 516 1.04e-127 380
MS.gene067183.t1 AT1G57750 40.213 470 262 6 1 464 41 497 9.34e-127 377
MS.gene067183.t1 AT4G39510 42.017 476 255 8 1 464 40 506 1.14e-123 370
MS.gene067183.t1 AT1G65340 39.535 473 263 7 1 462 42 502 1.06e-119 359
MS.gene067183.t1 AT5G52320 39.112 473 264 7 1 462 42 501 6.65e-116 350
MS.gene067183.t1 AT5G02900 41.213 478 239 11 1 464 31 480 2.40e-115 347
MS.gene067183.t1 AT5G52320 38.889 468 262 7 1 457 42 496 9.28e-114 344
MS.gene067183.t1 AT5G08250 38.462 481 271 11 1 465 9 480 8.47e-113 341
MS.gene067183.t1 AT5G08250 38.462 481 271 11 1 465 71 542 2.45e-112 342
MS.gene067183.t1 AT5G23190 37.238 478 282 9 1 465 70 542 5.01e-109 334
MS.gene067183.t1 AT1G24540 37.342 474 282 6 1 463 51 520 3.35e-107 328
MS.gene067183.t1 AT3G26125 35.318 487 287 10 1 465 54 534 5.19e-99 307
MS.gene067183.t1 AT1G63710 36.688 477 279 10 2 463 39 507 2.01e-96 300
MS.gene067183.t1 AT1G57750 37.783 397 229 5 1 392 41 424 2.80e-96 297
MS.gene067183.t1 AT2G45970 35.477 482 281 10 2 463 39 510 9.73e-95 296
MS.gene067183.t1 AT1G13140 34.029 479 296 8 1 465 54 526 2.95e-93 292
MS.gene067183.t1 AT4G00360 35.270 482 283 10 2 463 39 511 5.98e-92 290
MS.gene067183.t1 AT1G13150 34.534 472 289 8 8 465 54 519 1.11e-91 288
MS.gene067183.t1 AT1G13140 33.333 474 280 8 1 465 54 500 2.02e-89 281
MS.gene067183.t1 AT1G01600 34.576 483 287 11 2 463 39 513 2.97e-89 283
MS.gene067183.t1 AT5G58860 34.388 474 282 9 2 458 42 503 6.50e-86 273
MS.gene067183.t1 AT3G56630 35.010 477 277 15 2 463 40 498 1.38e-83 266
MS.gene067183.t1 AT1G34540 34.526 475 281 14 2 463 40 497 4.46e-82 262
MS.gene067183.t1 AT2G45510 34.820 471 283 12 5 463 50 508 8.94e-80 256
MS.gene067183.t1 AT2G27690 35.225 423 253 10 38 456 74 479 3.10e-78 252
MS.gene067183.t1 AT2G44890 34.115 469 289 11 5 463 50 508 1.55e-76 248
MS.gene067183.t1 AT5G63450 33.410 434 264 10 40 463 84 502 2.15e-75 245
MS.gene067183.t1 AT3G48520 34.163 442 259 12 36 464 78 500 3.17e-75 244
MS.gene067183.t1 AT5G63450 33.410 434 264 10 40 463 142 560 8.85e-75 245
MS.gene067183.t1 AT2G44890 32.906 468 278 11 5 463 50 490 6.65e-72 236
MS.gene067183.t1 AT3G01900 33.028 436 257 13 40 463 78 490 1.30e-68 227
MS.gene067183.t1 AT1G69500 30.172 464 281 9 37 464 68 524 2.56e-65 219
MS.gene067183.t1 AT1G31800 25.490 459 298 16 23 464 139 570 7.87e-31 125
MS.gene067183.t1 AT3G53130 23.491 464 306 15 20 463 105 539 1.55e-30 124
MS.gene067183.t1 AT5G51900 31.208 298 134 10 180 464 1 240 8.26e-28 111
MS.gene067183.t1 AT2G26710 23.965 459 315 13 5 458 81 510 1.89e-22 100
MS.gene067183.t1 AT5G24900 21.831 426 308 11 45 461 116 525 1.06e-21 98.2
MS.gene067183.t1 AT5G24900 22.378 429 296 13 48 461 2 408 1.44e-21 97.1
MS.gene067183.t1 AT5G52400 23.956 455 309 15 13 456 84 512 2.65e-21 97.1
MS.gene067183.t1 AT2G24180 26.727 333 224 11 130 456 173 491 4.63e-20 93.2
MS.gene067183.t1 AT3G14680 22.976 457 300 17 15 455 84 504 5.44e-20 93.2
MS.gene067183.t1 AT5G35715 25.201 373 241 13 64 424 45 391 1.53e-19 91.3
MS.gene067183.t1 AT1G64940 26.838 272 172 7 197 463 259 508 1.81e-19 91.3
MS.gene067183.t1 AT3G20940 26.471 272 173 7 204 463 253 509 2.45e-19 90.9
MS.gene067183.t1 AT1G64950 26.838 272 172 6 197 463 258 507 2.69e-19 90.9
MS.gene067183.t1 AT3G20140 25.872 344 226 8 130 463 180 504 1.36e-18 88.6
MS.gene067183.t1 AT5G24910 22.646 446 285 17 45 463 120 532 2.24e-18 88.2
MS.gene067183.t1 AT3G61040 28.879 232 154 6 199 429 235 456 3.01e-18 87.8
MS.gene067183.t1 AT1G66030 33.607 122 74 1 1 122 48 162 4.27e-18 82.0
MS.gene067183.t1 AT4G13310 23.077 338 234 12 84 414 124 442 7.74e-18 86.3
MS.gene067183.t1 AT4G13770 23.181 371 267 9 74 439 113 470 1.02e-17 85.9
MS.gene067183.t1 AT2G14100 26.087 299 195 10 130 420 181 461 3.42e-17 84.3
MS.gene067183.t1 AT2G45580 25.532 376 240 13 81 439 127 479 3.91e-17 84.3
MS.gene067183.t1 AT1G01280 23.133 415 285 15 36 433 73 470 4.26e-17 84.0
MS.gene067183.t1 AT4G15350 24.910 277 185 7 201 465 239 504 2.02e-16 82.0
MS.gene067183.t1 AT2G12190 25.912 274 174 7 197 463 258 509 2.29e-16 82.0
MS.gene067183.t1 AT3G26330 24.595 370 233 14 95 442 126 471 2.29e-16 81.6
MS.gene067183.t1 AT4G13290 23.099 342 221 12 84 414 125 435 3.98e-16 80.9
MS.gene067183.t1 AT4G31940 25.794 252 174 7 199 442 248 494 4.11e-16 81.3
MS.gene067183.t1 AT3G32047 24.138 377 226 10 56 420 131 459 4.39e-16 80.9
MS.gene067183.t1 AT3G25180 24.912 285 191 8 163 442 217 483 4.43e-16 80.9
MS.gene067183.t1 AT4G31950 26.587 252 172 7 199 442 236 482 5.40e-16 80.9
MS.gene067183.t1 AT2G46950 21.109 469 322 12 1 458 134 565 6.79e-16 80.5
MS.gene067183.t1 AT3G48270 22.021 386 243 11 51 429 114 448 1.09e-15 79.7
MS.gene067183.t1 AT3G48300 21.354 384 250 8 50 429 111 446 1.43e-15 79.3
MS.gene067183.t1 AT3G48300 21.354 384 250 8 50 429 113 448 1.44e-15 79.3
MS.gene067183.t1 AT5G06900 25.475 263 166 9 185 436 222 465 2.11e-15 79.0
MS.gene067183.t1 AT4G31970 27.273 253 169 9 199 442 247 493 2.33e-15 79.0
MS.gene067183.t1 AT5G38450 22.250 400 274 10 70 458 138 511 2.41e-15 78.6
MS.gene067183.t1 AT3G20950 24.291 247 167 6 194 431 242 477 2.50e-15 78.6
MS.gene067183.t1 AT1G64930 28.182 220 149 6 249 463 293 508 2.64e-15 78.6
MS.gene067183.t1 AT5G57260 25.309 324 215 11 130 442 167 474 3.55e-15 78.2
MS.gene067183.t1 AT1G50560 23.754 341 240 10 130 463 184 511 4.31e-15 77.8
MS.gene067183.t1 AT4G37340 29.204 226 135 6 198 418 235 440 4.38e-15 77.8
MS.gene067183.t1 AT3G26160 26.667 225 143 6 199 414 235 446 7.78e-15 77.0
MS.gene067183.t1 AT3G61880 25.110 227 149 8 210 429 279 491 1.42e-14 76.3
MS.gene067183.t1 AT3G61880 25.110 227 149 8 210 429 279 491 1.75e-14 76.3
MS.gene067183.t1 AT4G27710 23.894 452 301 16 20 458 91 512 2.29e-14 75.9
MS.gene067183.t1 AT1G33720 26.724 348 214 14 108 439 24 346 2.51e-14 74.7
MS.gene067183.t1 AT1G33720 26.724 348 214 14 108 439 24 346 2.51e-14 74.7
MS.gene067183.t1 AT1G33720 26.724 348 214 14 108 439 24 346 2.51e-14 74.7
MS.gene067183.t1 AT2G27000 23.134 268 183 6 210 465 252 508 2.55e-14 75.5
MS.gene067183.t1 AT3G26310 25.850 294 186 11 130 412 167 439 2.72e-14 75.5
MS.gene067183.t1 AT4G39950 25.714 245 172 7 199 439 307 545 2.94e-14 75.5
MS.gene067183.t1 AT3G14660 24.779 339 215 12 129 455 48 358 3.08e-14 74.3
MS.gene067183.t1 AT2G27010 26.316 247 162 5 192 429 212 447 3.32e-14 75.1
MS.gene067183.t1 AT1G33720 26.724 348 214 14 108 439 156 478 3.33e-14 75.1
MS.gene067183.t1 AT4G39950 25.820 244 171 7 199 438 267 504 3.37e-14 75.1
MS.gene067183.t1 AT3G20100 24.918 305 194 9 130 420 179 462 4.00e-14 75.1
MS.gene067183.t1 AT1G01190 26.977 215 138 8 248 453 313 517 4.42e-14 74.7
MS.gene067183.t1 AT1G01190 26.977 215 138 8 248 453 318 522 4.62e-14 74.7
MS.gene067183.t1 AT2G22330 25.103 243 172 7 199 437 269 505 7.71e-14 73.9
MS.gene067183.t1 AT3G26830 24.277 346 236 12 93 425 121 453 8.06e-14 73.9
MS.gene067183.t1 AT2G45550 24.054 370 259 12 77 439 124 478 8.10e-14 73.9
MS.gene067183.t1 AT1G74110 22.637 455 299 17 36 463 108 536 8.18e-14 73.9
MS.gene067183.t1 AT2G22330 25.103 243 172 7 199 437 292 528 9.00e-14 73.9
MS.gene067183.t1 AT2G45560 28.629 248 160 8 199 439 241 478 1.00e-13 73.6
MS.gene067183.t1 AT4G37370 27.523 218 142 6 201 418 238 439 1.03e-13 73.6
MS.gene067183.t1 AT2G30770 25.455 220 154 5 224 439 254 467 1.05e-13 73.6
MS.gene067183.t1 AT5G07990 23.485 396 261 16 51 429 92 462 1.14e-13 73.6
MS.gene067183.t1 AT3G26290 26.462 325 206 13 130 442 181 484 1.28e-13 73.2
MS.gene067183.t1 AT1G64900 29.134 254 160 8 225 464 258 505 1.32e-13 73.2
MS.gene067183.t1 AT3G26290 26.462 325 206 13 130 442 168 471 1.43e-13 73.2
MS.gene067183.t1 AT2G26170 27.778 252 161 9 222 463 198 438 2.66e-13 72.0
MS.gene067183.t1 AT5G24950 21.390 374 249 12 68 429 116 456 3.73e-13 72.0
MS.gene067183.t1 AT3G20080 24.128 344 225 10 138 465 51 374 4.19e-13 71.2
MS.gene067183.t1 AT3G20080 24.128 344 225 10 138 465 51 374 4.19e-13 71.2
MS.gene067183.t1 AT3G20080 24.128 344 225 10 138 465 51 374 4.19e-13 71.2
MS.gene067183.t1 AT3G20080 24.128 344 225 10 138 465 51 374 4.19e-13 71.2
MS.gene067183.t1 AT1G13100 22.255 337 245 9 84 414 117 442 4.80e-13 71.6
MS.gene067183.t1 AT2G26170 27.778 252 161 9 222 463 281 521 5.24e-13 71.6
MS.gene067183.t1 AT3G20080 25.410 244 159 6 234 465 279 511 5.25e-13 71.6
MS.gene067183.t1 AT3G20080 25.410 244 159 6 234 465 279 511 5.25e-13 71.6
MS.gene067183.t1 AT3G20110 22.973 296 203 7 130 420 177 452 5.59e-13 71.2
MS.gene067183.t1 AT3G26300 26.772 254 167 8 196 442 230 471 6.88e-13 70.9
MS.gene067183.t1 AT1G67110 27.219 169 105 5 297 458 348 505 7.38e-13 70.9
MS.gene067183.t1 AT2G46960 26.357 258 170 9 210 458 150 396 8.15e-13 70.5
MS.gene067183.t1 AT2G46960 22.418 455 306 15 20 458 89 512 1.00e-12 70.5
MS.gene067183.t1 AT2G46660 24.521 261 179 9 210 463 279 528 1.20e-12 70.5
MS.gene067183.t1 AT1G28430 26.515 264 170 7 215 465 257 509 1.35e-12 70.1
MS.gene067183.t1 AT4G15360 23.118 372 251 12 71 429 119 468 1.35e-12 70.1
MS.gene067183.t1 AT1G66540 27.074 229 130 10 201 418 66 268 1.44e-12 68.9
MS.gene067183.t1 AT1G66540 27.074 229 130 10 201 418 125 327 1.95e-12 68.9
MS.gene067183.t1 AT5G67310 26.271 236 151 7 199 429 245 462 1.99e-12 69.7
MS.gene067183.t1 AT5G42580 25.735 272 174 7 204 463 238 493 2.59e-12 69.3
MS.gene067183.t1 AT5G25140 22.520 373 255 12 81 442 118 467 3.07e-12 68.9
MS.gene067183.t1 AT3G20935 27.174 184 111 6 258 429 125 297 4.84e-12 67.8
MS.gene067183.t1 AT3G53300 25.460 326 207 11 110 424 153 453 5.07e-12 68.2
MS.gene067183.t1 AT3G48280 25.728 206 137 5 231 429 252 448 6.27e-12 68.2
MS.gene067183.t1 AT2G45570 24.538 379 247 15 81 439 120 479 6.91e-12 67.8
MS.gene067183.t1 AT3G03470 27.805 205 140 4 244 442 283 485 7.87e-12 67.8
MS.gene067183.t1 AT3G20960 24.407 295 198 8 184 465 227 509 9.16e-12 67.4
MS.gene067183.t1 AT2G02580 24.847 326 210 11 130 442 168 471 1.15e-11 67.0
MS.gene067183.t1 AT5G04330 25.311 241 163 6 199 429 231 464 1.19e-11 67.0
MS.gene067183.t1 AT3G20960 24.407 295 198 8 184 465 124 406 1.33e-11 66.6
MS.gene067183.t1 AT5G36220 27.354 223 120 8 221 418 241 446 2.40e-11 66.2
MS.gene067183.t1 AT4G37310 31.288 163 106 4 258 418 294 452 2.42e-11 66.2
MS.gene067183.t1 AT5G36220 27.354 223 120 8 221 418 95 300 2.63e-11 65.5
MS.gene067183.t1 AT4G12320 23.827 277 189 7 199 463 244 510 2.79e-11 65.9
MS.gene067183.t1 AT3G26280 22.135 384 261 13 51 424 103 458 2.82e-11 65.9
MS.gene067183.t1 AT2G23190 25.379 264 157 9 174 425 256 491 3.04e-11 65.9
MS.gene067183.t1 AT1G13110 21.024 371 260 12 64 424 111 458 3.13e-11 65.9
MS.gene067183.t1 AT3G26200 23.037 382 242 15 64 425 107 456 3.28e-11 65.9
MS.gene067183.t1 AT3G26280 22.135 384 261 13 51 424 120 475 3.38e-11 65.9
MS.gene067183.t1 AT4G37320 27.232 224 133 7 201 417 239 439 5.61e-11 65.1
MS.gene067183.t1 AT1G79370 23.237 241 163 6 190 418 253 483 7.03e-11 64.7
MS.gene067183.t1 AT3G28740 28.251 223 134 7 201 418 247 448 7.18e-11 64.7

Find 103 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTCTTGAATAATTT+TGG 0.132514 1.2:-20827832 None:intergenic
TCCATGATGTTTCAAAATTA+TGG 0.164422 1.2:-20827010 None:intergenic
CACATCGCGAGCAAGAATTT+TGG 0.236313 1.2:+20827108 MS.gene067183:CDS
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.2:+20828063 MS.gene067183:CDS
CTTAATGATGTATGTGAAAT+AGG 0.250323 1.2:+20827318 MS.gene067183:CDS
GCACTTGCTTTGCTCTTGTT+TGG 0.288326 1.2:-20827625 None:intergenic
CTTAGCTCATTAAACTTGTT+TGG 0.294588 1.2:-20827429 None:intergenic
ACCACCTTTATGTGAAATTT+CGG 0.304852 1.2:-20828248 None:intergenic
TCCTTACCCATACAACTTCT+AGG 0.313753 1.2:-20828185 None:intergenic
AACTTGTTTGGAAGGCAATT+AGG 0.324390 1.2:-20827417 None:intergenic
AGCATCTGCACTATTACATT+TGG 0.331822 1.2:+20827387 MS.gene067183:CDS
TTCACAAACACAAACTTTAT+CGG 0.341400 1.2:+20827060 MS.gene067183:CDS
AAAGACAGCTTTGGGGTTAC+CGG 0.359233 1.2:-20828281 None:intergenic
TTGTTTCCATACGTGGGAAT+TGG 0.366846 1.2:-20827196 None:intergenic
GAAGAACAAAAGACAGCTTT+GGG 0.367156 1.2:-20828289 None:intergenic
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.2:+20827508 MS.gene067183:CDS
GTTACCGAAATTTCACATAA+AGG 0.372110 1.2:+20828244 MS.gene067183:CDS
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.2:+20828064 MS.gene067183:CDS
AAATTATGGTTGCATGATCA+TGG 0.395086 1.2:-20826996 None:intergenic
TACAGGTCCTAGAAGTTGTA+TGG 0.398930 1.2:+20828178 MS.gene067183:CDS
AAGTTTATAGCTTTCAATAC+AGG 0.400273 1.2:+20828161 MS.gene067183:CDS
GATAAGCTAGTGTACCTTCA+TGG 0.401463 1.2:+20827909 MS.gene067183:CDS
GGAGGAACATTTAGATTTGA+AGG 0.402855 1.2:+20827030 MS.gene067183:CDS
ATTATGACCTCATCTATAAC+AGG 0.412150 1.2:-20827477 None:intergenic
TGAAGAACAAAAGACAGCTT+TGG 0.418517 1.2:-20828290 None:intergenic
GCGATGTGGTCGACATTCAT+TGG 0.422408 1.2:-20827093 None:intergenic
TCTCAGAAGGAAAACCTTCA+AGG 0.428980 1.2:+20827242 MS.gene067183:CDS
ACTGTACTCTTTGTACGCTA+TGG 0.429627 1.2:+20828043 MS.gene067183:CDS
CTCTCCACTAGGTAGTATAT+CGG 0.434770 1.2:-20827997 None:intergenic
GGAAATGGCACAGTTACTTC+AGG 0.442335 1.2:+20827762 MS.gene067183:CDS
TCACATACATCATTAAGAAA+TGG 0.444958 1.2:-20827312 None:intergenic
GCACTGATGAAGGAAGAATA+TGG 0.446771 1.2:+20827681 MS.gene067183:CDS
CATTTAGATTTGAAGGAGCC+TGG 0.451728 1.2:+20827037 MS.gene067183:CDS
TAAATTCCAATTCCCACGTA+TGG 0.452111 1.2:+20827190 MS.gene067183:CDS
TAGCTTTATTCAAATGAAGA+TGG 0.462100 1.2:+20828211 MS.gene067183:CDS
CATCATTAAGAAATGGTAGT+AGG 0.464665 1.2:-20827305 None:intergenic
GAGTACAGTAACCTAGTGTT+TGG 0.464865 1.2:-20828029 None:intergenic
GCTCATTAAACTTGTTTGGA+AGG 0.466990 1.2:-20827425 None:intergenic
TCCTCTGTTGTTTCCATACG+TGG 0.467300 1.2:-20827203 None:intergenic
AAAGTTTGTGTTTGTGAACC+AGG 0.467988 1.2:-20827055 None:intergenic
TAGATGAGGTCATAATTTAC+CGG 0.470321 1.2:+20827484 MS.gene067183:CDS
CTCTCTGATACCCATCTCTC+AGG 0.476597 1.2:-20828110 None:intergenic
CAGTTACTTCAGGTCTCAGT+TGG 0.479786 1.2:+20827772 MS.gene067183:CDS
CCAGTAATTGGTATGCTACC+GGG 0.480057 1.2:+20826949 None:intergenic
TTATACTTTCATACAAGAAA+CGG 0.484289 1.2:-20827596 None:intergenic
GGTTGCATGATCATGGAAAT+CGG 0.486632 1.2:-20826989 None:intergenic
TCCTAGAAGTTGTATGGGTA+AGG 0.489801 1.2:+20828184 MS.gene067183:CDS
CTGTACTCTTTGTACGCTAT+GGG 0.491458 1.2:+20828044 MS.gene067183:CDS
AAAGGTGGTGGAAGGTCATC+CGG 0.496710 1.2:+20828262 MS.gene067183:CDS
AAAGCTATAAACTTGTAAGA+TGG 0.506631 1.2:-20828152 None:intergenic
GCCAGTAATTGGTATGCTAC+CGG 0.507906 1.2:+20826948 None:intergenic
TTGTTGGAAGAAGTCCTTGA+AGG 0.508042 1.2:-20827256 None:intergenic
ATTGCACAGATATGCTCAAA+AGG 0.511230 1.2:-20827969 None:intergenic
ATGAAGGAAGAATATGGAAA+GGG 0.512003 1.2:+20827687 MS.gene067183:CDS
TGTTTCATTCATTTCTCAGA+AGG 0.514046 1.2:+20827229 MS.gene067183:CDS
GTCGACATTCATTGGATCAC+TGG 0.515263 1.2:-20827085 None:intergenic
GGAATTTAAGCCTGAGAGAT+GGG 0.521678 1.2:+20828100 MS.gene067183:CDS
TGAGATTCTTCCGAGATATG+AGG 0.522615 1.2:+20827881 MS.gene067183:CDS
CAAAATTCTTGCTCGCGATG+TGG 0.528826 1.2:-20827107 None:intergenic
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.2:+20827806 MS.gene067183:CDS
CAGATATGCTCAAAAGGTAC+AGG 0.535905 1.2:-20827963 None:intergenic
GAAATTTCACATAAAGGTGG+TGG 0.536525 1.2:+20828250 MS.gene067183:CDS
CTTTGTAAAAGCACTGATGA+AGG 0.544964 1.2:+20827671 MS.gene067183:CDS
GACAGGTGACGCAAAAGCCC+CGG 0.545156 1.2:-20826967 None:intergenic
TGGAATTTAAGCCTGAGAGA+TGG 0.546234 1.2:+20828099 MS.gene067183:CDS
TTATCAAGATCCTCATATCT+CGG 0.551902 1.2:-20827891 None:intergenic
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.2:-20827503 None:intergenic
CATGATCATGGAAATCGGAC+AGG 0.554044 1.2:-20826984 None:intergenic
AGGTGCGCACGTGGACCTTG+AGG 0.572846 1.2:+20827338 MS.gene067183:CDS
ATCTCTTCCTGTTATAGATG+AGG 0.574836 1.2:+20827470 MS.gene067183:CDS
TCACATGAAACATGGCCTGA+AGG 0.582075 1.2:+20828310 MS.gene067183:CDS
TTGGTCAAGAAAAGAAGTCA+AGG 0.584278 1.2:+20827553 MS.gene067183:CDS
GTGCAGCAATAGTGAAGACA+TGG 0.587868 1.2:+20827644 MS.gene067183:CDS
TTTGTACGCTATGGGAAGGA+TGG 0.588075 1.2:+20828052 MS.gene067183:CDS
ACAGGTCCTAGAAGTTGTAT+GGG 0.590779 1.2:+20828179 MS.gene067183:CDS
GGACTAACACGCTCTCCACT+AGG 0.590927 1.2:-20828008 None:intergenic
CCTCTGTTGTTTCCATACGT+GGG 0.591110 1.2:-20827202 None:intergenic
AGATAACATGCAAACACAAG+AGG 0.598763 1.2:+20827854 MS.gene067183:CDS
TGAAGGAAGAATATGGAAAG+GGG 0.601764 1.2:+20827688 MS.gene067183:CDS
TTTGTTCTTCACATGAAACA+TGG 0.601948 1.2:+20828302 MS.gene067183:CDS
TTTCACATAAAGGTGGTGGA+AGG 0.605673 1.2:+20828254 MS.gene067183:CDS
ATCAAAAGTGAACCTACTCA+AGG 0.610670 1.2:-20827364 None:intergenic
GAAGGAAGAATATGGAAAGG+GGG 0.613616 1.2:+20827689 MS.gene067183:CDS
ACCTTGAGGATGCCTTGAGT+AGG 0.615419 1.2:+20827352 MS.gene067183:CDS
GAGAGATGGGTATCAGAGAG+AGG 0.617792 1.2:+20828113 MS.gene067183:CDS
GATGAAGGAAGAATATGGAA+AGG 0.622476 1.2:+20827686 MS.gene067183:CDS
AATATGGGGAGAAGACTGCA+TGG 0.631048 1.2:+20828079 MS.gene067183:CDS
ACCGAAATTTCACATAAAGG+TGG 0.633013 1.2:+20828247 MS.gene067183:CDS
CTTCACATAGAGTTCCATGA+AGG 0.636192 1.2:-20827923 None:intergenic
TACAGGAGGATAAAGTCTCA+AGG 0.637791 1.2:-20827946 None:intergenic
GGAAGGATGGAACAAATATG+GGG 0.639334 1.2:+20828065 MS.gene067183:CDS
ACCTACTCAAGGCATCCTCA+AGG 0.640006 1.2:-20827353 None:intergenic
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.2:-20827960 None:intergenic
CAGTAATTGGTATGCTACCG+GGG 0.647585 1.2:+20826950 None:intergenic
ATGTGAAATAGGTGCGCACG+TGG 0.654315 1.2:+20827329 MS.gene067183:CDS
AAATCCGATATACTACCTAG+TGG 0.664104 1.2:+20827993 MS.gene067183:CDS
TGGTCAAGAAAAGAAGTCAA+GGG 0.666445 1.2:+20827554 MS.gene067183:CDS
TCTGAGAAATGAATGAAACA+TGG 0.674609 1.2:-20827226 None:intergenic
ACTCTTTGTACGCTATGGGA+AGG 0.676286 1.2:+20828048 MS.gene067183:CDS
AGCGTGTTAGTCCAAACACT+AGG 0.712892 1.2:+20828018 MS.gene067183:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.2:-20827516 None:intergenic
AAGAACAAAAGACAGCTTTG+GGG 0.724610 1.2:-20828288 None:intergenic
CCCACGTATGGAAACAACAG+AGG 0.727932 1.2:+20827202 MS.gene067183:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGAAATTTTTGACTTTTT+TGG + chr1.2:20827156-20827175 MS.gene067183:CDS 15.0%
!!! TTTGATTTCTTGAATAATTT+TGG - chr1.2:20827835-20827854 None:intergenic 15.0%
!! TTATACTTTCATACAAGAAA+CGG - chr1.2:20827599-20827618 None:intergenic 20.0%
! AAAGCTATAAACTTGTAAGA+TGG - chr1.2:20828155-20828174 None:intergenic 25.0%
! AAGTTTATAGCTTTCAATAC+AGG + chr1.2:20828161-20828180 MS.gene067183:CDS 25.0%
! CTTAATGATGTATGTGAAAT+AGG + chr1.2:20827318-20827337 MS.gene067183:CDS 25.0%
! TCACATACATCATTAAGAAA+TGG - chr1.2:20827315-20827334 None:intergenic 25.0%
! TCCATGATGTTTCAAAATTA+TGG - chr1.2:20827013-20827032 None:intergenic 25.0%
! TTCACAAACACAAACTTTAT+CGG + chr1.2:20827060-20827079 MS.gene067183:CDS 25.0%
!!! ACCATAATTTTGAAACATCA+TGG + chr1.2:20827009-20827028 MS.gene067183:CDS 25.0%
!!! ATAATTTTGAAACATCATGG+AGG + chr1.2:20827012-20827031 MS.gene067183:CDS 25.0%
!!! ATTTTTGACTTTTTTGGAGA+TGG + chr1.2:20827162-20827181 MS.gene067183:CDS 25.0%
!!! TAGCTTTATTCAAATGAAGA+TGG + chr1.2:20828211-20828230 MS.gene067183:CDS 25.0%
AAATTATGGTTGCATGATCA+TGG - chr1.2:20826999-20827018 None:intergenic 30.0%
ACAAACTATGAAGAAAAAGC+TGG + chr1.2:20827275-20827294 MS.gene067183:CDS 30.0%
ACCACCTTTATGTGAAATTT+CGG - chr1.2:20828251-20828270 None:intergenic 30.0%
ATGAAGGAAGAATATGGAAA+GGG + chr1.2:20827687-20827706 MS.gene067183:CDS 30.0%
ATTATGACCTCATCTATAAC+AGG - chr1.2:20827480-20827499 None:intergenic 30.0%
CATCATTAAGAAATGGTAGT+AGG - chr1.2:20827308-20827327 None:intergenic 30.0%
GTTACCGAAATTTCACATAA+AGG + chr1.2:20828244-20828263 MS.gene067183:CDS 30.0%
TAGATGAGGTCATAATTTAC+CGG + chr1.2:20827484-20827503 MS.gene067183:CDS 30.0%
TCTGAGAAATGAATGAAACA+TGG - chr1.2:20827229-20827248 None:intergenic 30.0%
TGTTTCATTCATTTCTCAGA+AGG + chr1.2:20827229-20827248 MS.gene067183:CDS 30.0%
TTATCAAGATCCTCATATCT+CGG - chr1.2:20827894-20827913 None:intergenic 30.0%
TTTGTTCTTCACATGAAACA+TGG + chr1.2:20828302-20828321 MS.gene067183:CDS 30.0%
! CTTAGCTCATTAAACTTGTT+TGG - chr1.2:20827432-20827451 None:intergenic 30.0%
!! GCTTTTTCTTCATAGTTTGT+TGG - chr1.2:20827275-20827294 None:intergenic 30.0%
!!! ATAATTTTGGCTTCCACAAT+AGG - chr1.2:20827822-20827841 None:intergenic 30.0%
AAAGTTTGTGTTTGTGAACC+AGG - chr1.2:20827058-20827077 None:intergenic 35.0%
AAATCCGATATACTACCTAG+TGG + chr1.2:20827993-20828012 MS.gene067183:CDS 35.0%
AAGAACAAAAGACAGCTTTG+GGG - chr1.2:20828291-20828310 None:intergenic 35.0%
ACCGAAATTTCACATAAAGG+TGG + chr1.2:20828247-20828266 MS.gene067183:CDS 35.0%
AGATAACATGCAAACACAAG+AGG + chr1.2:20827854-20827873 MS.gene067183:CDS 35.0%
AGCATCTGCACTATTACATT+TGG + chr1.2:20827387-20827406 MS.gene067183:CDS 35.0%
ATCAAAAGTGAACCTACTCA+AGG - chr1.2:20827367-20827386 None:intergenic 35.0%
ATCTCTTCCTGTTATAGATG+AGG + chr1.2:20827470-20827489 MS.gene067183:CDS 35.0%
ATTGCACAGATATGCTCAAA+AGG - chr1.2:20827972-20827991 None:intergenic 35.0%
GAAATTTCACATAAAGGTGG+TGG + chr1.2:20828250-20828269 MS.gene067183:CDS 35.0%
GAAGAACAAAAGACAGCTTT+GGG - chr1.2:20828292-20828311 None:intergenic 35.0%
GATGAAGGAAGAATATGGAA+AGG + chr1.2:20827686-20827705 MS.gene067183:CDS 35.0%
GGAGGAACATTTAGATTTGA+AGG + chr1.2:20827030-20827049 MS.gene067183:CDS 35.0%
TAAATTCCAATTCCCACGTA+TGG + chr1.2:20827190-20827209 MS.gene067183:CDS 35.0%
TGAAGAACAAAAGACAGCTT+TGG - chr1.2:20828293-20828312 None:intergenic 35.0%
TGAAGGAAGAATATGGAAAG+GGG + chr1.2:20827688-20827707 MS.gene067183:CDS 35.0%
TGGTCAAGAAAAGAAGTCAA+GGG + chr1.2:20827554-20827573 MS.gene067183:CDS 35.0%
TGTTTCAACTCATCCTATTG+TGG + chr1.2:20827806-20827825 MS.gene067183:CDS 35.0%
TTGGTCAAGAAAAGAAGTCA+AGG + chr1.2:20827553-20827572 MS.gene067183:CDS 35.0%
! AACTTGTTTGGAAGGCAATT+AGG - chr1.2:20827420-20827439 None:intergenic 35.0%
! ACTTCTTTTCTTGACCAACA+CGG - chr1.2:20827551-20827570 None:intergenic 35.0%
! GAAACGGTCAAGTTTTTCTT+CGG - chr1.2:20827583-20827602 None:intergenic 35.0%
! GCTCATTAAACTTGTTTGGA+AGG - chr1.2:20827428-20827447 None:intergenic 35.0%
!! AGCAAGAATTTTGGCAACTA+CGG + chr1.2:20827117-20827136 MS.gene067183:CDS 35.0%
!! CTTTGTAAAAGCACTGATGA+AGG + chr1.2:20827671-20827690 MS.gene067183:CDS 35.0%
!!! TTTTAGTGGCTTTAACCTTC+AGG - chr1.2:20828328-20828347 None:intergenic 35.0%
ACAGGTCCTAGAAGTTGTAT+GGG + chr1.2:20828179-20828198 MS.gene067183:CDS 40.0%
ACTGTACTCTTTGTACGCTA+TGG + chr1.2:20828043-20828062 MS.gene067183:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG + chr1.2:20827508-20827527 MS.gene067183:CDS 40.0%
CATTTAGATTTGAAGGAGCC+TGG + chr1.2:20827037-20827056 MS.gene067183:CDS 40.0%
CTCTCCACTAGGTAGTATAT+CGG - chr1.2:20828000-20828019 None:intergenic 40.0%
CTGTACTCTTTGTACGCTAT+GGG + chr1.2:20828044-20828063 MS.gene067183:CDS 40.0%
CTTCACATAGAGTTCCATGA+AGG - chr1.2:20827926-20827945 None:intergenic 40.0%
GAAGGAAGAATATGGAAAGG+GGG + chr1.2:20827689-20827708 MS.gene067183:CDS 40.0%
GAGTACAGTAACCTAGTGTT+TGG - chr1.2:20828032-20828051 None:intergenic 40.0%
GATAAGCTAGTGTACCTTCA+TGG + chr1.2:20827909-20827928 MS.gene067183:CDS 40.0%
GGAAGGATGGAACAAATATG+GGG + chr1.2:20828065-20828084 MS.gene067183:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG + chr1.2:20828100-20828119 MS.gene067183:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG + chr1.2:20828064-20828083 MS.gene067183:CDS 40.0%
GGTTGCATGATCATGGAAAT+CGG - chr1.2:20826992-20827011 None:intergenic 40.0%
TACAGGAGGATAAAGTCTCA+AGG - chr1.2:20827949-20827968 None:intergenic 40.0%
TACAGGTCCTAGAAGTTGTA+TGG + chr1.2:20828178-20828197 MS.gene067183:CDS 40.0%
TCCTAGAAGTTGTATGGGTA+AGG + chr1.2:20828184-20828203 MS.gene067183:CDS 40.0%
TCCTTACCCATACAACTTCT+AGG - chr1.2:20828188-20828207 None:intergenic 40.0%
TCTCAGAAGGAAAACCTTCA+AGG + chr1.2:20827242-20827261 MS.gene067183:CDS 40.0%
TGAGATTCTTCCGAGATATG+AGG + chr1.2:20827881-20827900 MS.gene067183:CDS 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.2:20828099-20828118 MS.gene067183:CDS 40.0%
TGGGAAGGATGGAACAAATA+TGG + chr1.2:20828063-20828082 MS.gene067183:CDS 40.0%
TTGTTGGAAGAAGTCCTTGA+AGG - chr1.2:20827259-20827278 None:intergenic 40.0%
TTGTTTCCATACGTGGGAAT+TGG - chr1.2:20827199-20827218 None:intergenic 40.0%
! ATATGCTCAAAAGGTACAGG+AGG - chr1.2:20827963-20827982 None:intergenic 40.0%
! CAGATATGCTCAAAAGGTAC+AGG - chr1.2:20827966-20827985 None:intergenic 40.0%
! GCACTGATGAAGGAAGAATA+TGG + chr1.2:20827681-20827700 MS.gene067183:CDS 40.0%
!! AATTTTGGCAACTACGGAAG+AGG + chr1.2:20827123-20827142 MS.gene067183:CDS 40.0%
!! ATTTTGGCAACTACGGAAGA+GGG + chr1.2:20827124-20827143 MS.gene067183:CDS 40.0%
!! TCTCTGCTTTTAGCAGGAAA+TGG + chr1.2:20827747-20827766 MS.gene067183:CDS 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG + chr1.2:20828254-20828273 MS.gene067183:CDS 40.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.2:20828079-20828098 MS.gene067183:CDS 45.0%
ACTCTTTGTACGCTATGGGA+AGG + chr1.2:20828048-20828067 MS.gene067183:CDS 45.0%
AGCGTGTTAGTCCAAACACT+AGG + chr1.2:20828018-20828037 MS.gene067183:CDS 45.0%
CAAAATTCTTGCTCGCGATG+TGG - chr1.2:20827110-20827129 None:intergenic 45.0%
CAGTTACTTCAGGTCTCAGT+TGG + chr1.2:20827772-20827791 MS.gene067183:CDS 45.0%
CATGATCATGGAAATCGGAC+AGG - chr1.2:20826987-20827006 None:intergenic 45.0%
CTGCAAAAATTGCTCCGTGT+TGG + chr1.2:20827534-20827553 MS.gene067183:CDS 45.0%
GCACTTGCTTTGCTCTTGTT+TGG - chr1.2:20827628-20827647 None:intergenic 45.0%
GGAAATGGCACAGTTACTTC+AGG + chr1.2:20827762-20827781 MS.gene067183:CDS 45.0%
GTCGACATTCATTGGATCAC+TGG - chr1.2:20827088-20827107 None:intergenic 45.0%
GTGCAGCAATAGTGAAGACA+TGG + chr1.2:20827644-20827663 MS.gene067183:CDS 45.0%
TCACATGAAACATGGCCTGA+AGG + chr1.2:20828310-20828329 MS.gene067183:CDS 45.0%
TTTGTACGCTATGGGAAGGA+TGG + chr1.2:20828052-20828071 MS.gene067183:CDS 45.0%
! CACATCGCGAGCAAGAATTT+TGG + chr1.2:20827108-20827127 MS.gene067183:CDS 45.0%
!! AAAGACAGCTTTGGGGTTAC+CGG - chr1.2:20828284-20828303 None:intergenic 45.0%
!! CCTCTGTTGTTTCCATACGT+GGG - chr1.2:20827205-20827224 None:intergenic 45.0%
!! TCACTCTCTCTGCTTTTAGC+AGG + chr1.2:20827741-20827760 MS.gene067183:CDS 45.0%
!! TCCTCTGTTGTTTCCATACG+TGG - chr1.2:20827206-20827225 None:intergenic 45.0%
!!! CAGGTCTCAGTTGGTTTTTC+TGG + chr1.2:20827781-20827800 MS.gene067183:CDS 45.0%
ACCTTGAGGATGCCTTGAGT+AGG + chr1.2:20827352-20827371 MS.gene067183:CDS 50.0%
ATGTGAAATAGGTGCGCACG+TGG + chr1.2:20827329-20827348 MS.gene067183:CDS 50.0%
CCCACGTATGGAAACAACAG+AGG + chr1.2:20827202-20827221 MS.gene067183:CDS 50.0%
CTCTCTGATACCCATCTCTC+AGG - chr1.2:20828113-20828132 None:intergenic 50.0%
GACAACGTGGTATGAAGTGC+CGG - chr1.2:20827506-20827525 None:intergenic 50.0%
GAGAGATGGGTATCAGAGAG+AGG + chr1.2:20828113-20828132 MS.gene067183:CDS 50.0%
GCGATGTGGTCGACATTCAT+TGG - chr1.2:20827096-20827115 None:intergenic 50.0%
TGCAGCTTCCATAGACAACG+TGG - chr1.2:20827519-20827538 None:intergenic 50.0%
! ACCTACTCAAGGCATCCTCA+AGG - chr1.2:20827356-20827375 None:intergenic 50.0%
!! AAAGGTGGTGGAAGGTCATC+CGG + chr1.2:20828262-20828281 MS.gene067183:CDS 50.0%
GGACTAACACGCTCTCCACT+AGG - chr1.2:20828011-20828030 None:intergenic 55.0%
GACAGGTGACGCAAAAGCCC+CGG - chr1.2:20826970-20826989 None:intergenic 60.0%
AGGTGCGCACGTGGACCTTG+AGG + chr1.2:20827338-20827357 MS.gene067183:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 20826961 20828358 20826961 ID=MS.gene067183
chr1.2 mRNA 20826961 20828358 20826961 ID=MS.gene067183.t1;Parent=MS.gene067183
chr1.2 exon 20826961 20828358 20826961 ID=MS.gene067183.t1.exon1;Parent=MS.gene067183.t1
chr1.2 CDS 20826961 20828358 20826961 ID=cds.MS.gene067183.t1;Parent=MS.gene067183.t1
Gene Sequence

>MS.gene067183

ATGCTACCGGGGCTTTTGCGTCACCTGTCCGATTTCCATGATCATGCAACCATAATTTTGAAACATCATGGAGGAACATTTAGATTTGAAGGAGCCTGGTTCACAAACACAAACTTTATCGGTACCAGTGATCCAATGAATGTCGACCACATCGCGAGCAAGAATTTTGGCAACTACGGAAGAGGGTCTAACTTCAAAGAAATTTTTGACTTTTTTGGAGATGGTATTTTAAATTCCAATTCCCACGTATGGAAACAACAGAGGACCATGTTTCATTCATTTCTCAGAAGGAAAACCTTCAAGGACTTCTTCCAACAAACTATGAAGAAAAAGCTGGAGAACTACCTACTACCATTTCTTAATGATGTATGTGAAATAGGTGCGCACGTGGACCTTGAGGATGCCTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTACATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTCATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATTGCTCCGTGTTGGTCAAGAAAAGAAGTCAAGGGAAGCCGAAGAAAAACTTGACCGTTTCTTGTATGAAAGTATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAATAGTGAAGACATGGATGACTTTGTAAAAGCACTGATGAAGGAAGAATATGGAAAGGGGGAAATCGACGAGAAGTATCTTACAGACAATTCACTCTCTCTGCTTTTAGCAGGAAATGGCACAGTTACTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATTATTCAAGAAATCAAAGATAACATGCAAACACAAGAGGAGAATGAGATTCTTCCGAGATATGAGGATCTTGATAAGCTAGTGTACCTTCATGGAACTCTATGTGAAGCCTTGAGACTTTATCCTCCTGTACCTTTTGAGCATATCTGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAACACTAGGTTACTGTACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGAGAGGACGCACTATACATGTTCCATCTTACAAGTTTATAGCTTTCAATACAGGTCCTAGAAGTTGTATGGGTAAGGATATTAGCTTTATTCAAATGAAGATGGTCGCAGCTGTGTTACCGAAATTTCACATAAAGGTGGTGGAAGGTCATCCGGTAACCCCAAAGCTGTCTTTTGTTCTTCACATGAAACATGGCCTGAAGGTTAAAGCCACTAAAAGATGCATTTGA

Protein sequence

>MS.gene067183.t1

MLPGLLRHLSDFHDHATIILKHHGGTFRFEGAWFTNTNFIGTSDPMNVDHIASKNFGNYGRGSNFKEIFDFFGDGILNSNSHVWKQQRTMFHSFLRRKTFKDFFQQTMKKKLENYLLPFLNDVCEIGAHVDLEDALSRFTFDSICTITFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFIPRCLWKLQKLLRVGQEKKSREAEEKLDRFLYESITFSKQEQSKCSNSEDMDDFVKALMKEEYGKGEIDEKYLTDNSLSLLLAGNGTVTSGLSWFFWLVSTHPIVEAKIIQEIKDNMQTQEENEILPRYEDLDKLVYLHGTLCEALRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPERWVSERGRTIHVPSYKFIAFNTGPRSCMGKDISFIQMKMVAAVLPKFHIKVVEGHPVTPKLSFVLHMKHGLKVKATKRCI