AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067179

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067179.t1 MTR_1g035800 90.947 475 42 1 1 474 38 512 0.0 885
MS.gene067179.t1 MTR_1g036270 76.520 477 110 2 1 476 38 513 0.0 746
MS.gene067179.t1 MTR_1g050362 74.526 475 118 2 1 475 36 507 0.0 740
MS.gene067179.t1 MTR_1g035580 75.000 476 105 2 1 476 37 498 0.0 732
MS.gene067179.t1 MTR_1g036200 74.580 476 111 2 1 476 36 501 0.0 731
MS.gene067179.t1 MTR_1g035790 73.739 476 116 2 1 476 38 504 0.0 725
MS.gene067179.t1 MTR_1g036130 61.975 476 175 4 1 476 39 508 0.0 602
MS.gene067179.t1 MTR_1g035670 62.185 476 170 5 1 476 39 504 0.0 601
MS.gene067179.t1 MTR_1g035750 62.474 477 171 5 1 476 38 507 0.0 592
MS.gene067179.t1 MTR_1g036010 59.119 477 188 6 1 476 39 509 0.0 581
MS.gene067179.t1 MTR_1g035830 59.958 477 184 5 1 476 39 509 0.0 575
MS.gene067179.t1 MTR_1g035940 58.910 477 189 5 1 476 39 509 0.0 574
MS.gene067179.t1 MTR_1g035760 60.294 476 156 4 1 476 39 481 0.0 560
MS.gene067179.t1 MTR_1g069715 61.951 410 151 4 48 456 2 407 0.0 530
MS.gene067179.t1 MTR_7g033580 54.412 476 200 6 1 476 38 496 1.83e-179 512
MS.gene067179.t1 MTR_7g033570 52.311 476 210 5 1 476 38 496 3.45e-174 498
MS.gene067179.t1 MTR_8g088470 52.321 474 210 5 1 474 34 491 4.23e-174 498
MS.gene067179.t1 MTR_1g035860 58.894 416 161 5 1 416 45 450 2.12e-170 489
MS.gene067179.t1 MTR_6g004600 49.689 483 229 7 1 476 42 517 7.34e-164 473
MS.gene067179.t1 MTR_6g004670 50.000 474 227 4 1 474 42 505 1.69e-162 469
MS.gene067179.t1 MTR_6g004630 50.943 477 220 7 1 476 42 505 1.90e-161 466
MS.gene067179.t1 MTR_6g004610 50.633 474 220 7 1 473 2 462 5.34e-160 462
MS.gene067179.t1 MTR_6g004590 49.068 483 232 7 1 476 42 517 7.84e-159 460
MS.gene067179.t1 MTR_1g037550 37.320 485 286 7 1 475 72 548 2.66e-108 332
MS.gene067179.t1 MTR_1g037560 37.190 484 284 8 1 475 72 544 7.03e-108 331
MS.gene067179.t1 MTR_4g075110 37.344 482 283 8 1 474 79 549 1.09e-103 320
MS.gene067179.t1 MTR_4g012320 60.000 215 85 1 262 476 12 225 8.80e-96 288
MS.gene067179.t1 MTR_8g030590 34.156 486 293 9 2 474 39 510 5.29e-86 274
MS.gene067179.t1 MTR_8g098435 33.954 483 293 8 2 474 39 505 7.74e-86 273
MS.gene067179.t1 MTR_3g463060 34.711 484 279 12 2 474 45 502 5.50e-80 258
MS.gene067179.t1 MTR_5g070010 33.060 487 294 10 2 474 40 508 1.36e-78 254
MS.gene067179.t1 MTR_7g096340 33.824 476 269 16 12 475 62 503 1.37e-78 254
MS.gene067179.t1 MTR_7g096320 34.273 461 266 13 24 475 72 504 1.12e-75 246
MS.gene067179.t1 MTR_7g088330 34.521 449 254 12 41 474 85 508 2.66e-74 243
MS.gene067179.t1 MTR_3g080580 31.648 455 267 8 41 474 86 517 1.39e-72 239
MS.gene067179.t1 MTR_1g070365 34.157 445 256 12 41 474 86 504 2.61e-71 235
MS.gene067179.t1 MTR_7g029275 33.408 449 258 12 41 474 86 508 6.57e-71 234
MS.gene067179.t1 MTR_1g070345 32.285 477 272 13 25 475 54 505 8.78e-71 233
MS.gene067179.t1 MTR_4g054920 33.680 481 272 17 11 474 66 516 2.38e-69 230
MS.gene067179.t1 MTR_8g035810 34.228 447 273 11 36 474 77 510 8.17e-68 226
MS.gene067179.t1 MTR_8g035860 33.710 442 272 8 41 474 81 509 1.81e-67 225
MS.gene067179.t1 MTR_1g060550 32.273 440 270 11 41 474 93 510 2.28e-66 222
MS.gene067179.t1 MTR_8g035780 33.860 443 272 10 41 475 82 511 3.26e-66 221
MS.gene067179.t1 MTR_8g035820 33.710 442 272 8 41 474 81 509 4.43e-66 221
MS.gene067179.t1 MTR_2g086040 32.360 445 256 10 11 447 63 470 1.69e-64 216
MS.gene067179.t1 MTR_8g035680 31.120 482 292 11 6 474 58 512 5.07e-63 213
MS.gene067179.t1 MTR_1g102220 30.180 444 281 9 41 474 82 506 1.08e-61 209
MS.gene067179.t1 MTR_4g119660 31.663 499 289 12 6 475 41 516 2.56e-61 209
MS.gene067179.t1 MTR_8g035760 31.390 446 272 9 41 474 88 511 3.96e-61 208
MS.gene067179.t1 MTR_5g019140 31.864 499 288 13 6 475 56 531 1.06e-60 207
MS.gene067179.t1 MTR_8g035810 33.083 399 244 11 26 417 70 452 1.13e-53 187
MS.gene067179.t1 MTR_7g406990 32.955 352 219 9 1 347 55 394 1.70e-52 183
MS.gene067179.t1 MTR_8g035680 31.414 382 229 7 105 474 5 365 1.20e-51 179
MS.gene067179.t1 MTR_1g070370 33.333 264 147 7 132 392 5 242 2.91e-38 140
MS.gene067179.t1 MTR_1g040110 54.054 111 51 0 89 199 57 167 1.68e-37 135
MS.gene067179.t1 MTR_1g050590 60.163 123 40 4 215 337 5 118 5.40e-36 129
MS.gene067179.t1 MTR_1g102210 27.147 361 212 9 123 474 43 361 9.45e-36 136
MS.gene067179.t1 MTR_6g084040 50.000 148 54 3 1 147 38 166 6.64e-33 123
MS.gene067179.t1 MTR_8g035810 31.003 329 205 10 26 347 70 383 8.46e-33 129
MS.gene067179.t1 MTR_7g079440 26.464 461 298 21 24 474 219 648 2.11e-31 128
MS.gene067179.t1 MTR_1g036140 55.769 104 38 3 213 316 67 162 7.38e-26 103
MS.gene067179.t1 MTR_5g009110 24.444 450 275 16 40 447 116 542 7.64e-26 111
MS.gene067179.t1 MTR_8g098565 22.523 444 319 9 40 474 79 506 7.51e-25 107
MS.gene067179.t1 MTR_7g079440 27.792 385 239 19 24 400 219 572 1.17e-24 107
MS.gene067179.t1 MTR_1g062190 24.222 450 297 19 39 474 120 539 3.33e-24 105
MS.gene067179.t1 MTR_2g010320 24.558 452 297 15 41 474 78 503 2.71e-22 100
MS.gene067179.t1 MTR_2g010250 24.161 447 307 14 41 474 78 505 3.35e-22 99.8
MS.gene067179.t1 MTR_7g006900 27.542 236 155 7 237 469 245 467 6.36e-22 98.6
MS.gene067179.t1 MTR_5g009110 23.188 414 259 13 73 447 1 394 9.90e-22 97.8
MS.gene067179.t1 MTR_2g010290 24.439 446 291 14 41 474 121 532 1.28e-21 98.2
MS.gene067179.t1 MTR_6g017325 22.388 402 269 11 74 469 138 502 7.86e-21 95.5
MS.gene067179.t1 MTR_2g010380 23.491 464 323 15 26 474 63 509 8.41e-21 95.5
MS.gene067179.t1 MTR_8g035790 45.455 99 52 2 378 475 1 98 1.86e-20 86.7
MS.gene067179.t1 MTR_2g010330 23.725 451 302 16 41 474 82 507 2.92e-20 94.0
MS.gene067179.t1 MTR_8g046580 45.455 99 53 1 351 449 195 292 4.29e-20 91.3
MS.gene067179.t1 MTR_2g010280 23.251 443 314 10 41 474 78 503 7.06e-20 92.8
MS.gene067179.t1 MTR_0147s0030 26.122 245 169 5 233 473 294 530 1.19e-19 92.0
MS.gene067179.t1 MTR_1g101040 28.947 228 150 5 245 471 296 512 1.59e-19 91.7
MS.gene067179.t1 MTR_2g062670 32.843 204 99 7 112 306 49 223 1.83e-19 91.3
MS.gene067179.t1 MTR_6g008500 28.218 202 128 4 258 453 319 509 3.25e-19 90.9
MS.gene067179.t1 MTR_5g009110 25.294 340 213 13 40 362 116 431 3.50e-19 90.5
MS.gene067179.t1 MTR_8g104030 27.823 248 164 7 200 443 8 244 7.64e-19 87.0
MS.gene067179.t1 MTR_2g010300 22.768 448 298 13 41 475 78 490 1.21e-18 89.0
MS.gene067179.t1 MTR_1g101050 28.755 233 148 6 245 471 288 508 2.69e-18 87.8
MS.gene067179.t1 MTR_3g093530 27.530 247 167 6 227 473 289 523 3.35e-18 87.8
MS.gene067179.t1 MTR_6g072490 27.347 245 165 6 228 471 278 510 3.81e-18 87.4
MS.gene067179.t1 MTR_0025s0110 27.612 268 173 6 216 471 265 523 4.91e-18 87.0
MS.gene067179.t1 MTR_6g008530 28.351 194 122 4 258 445 313 495 5.08e-18 87.0
MS.gene067179.t1 MTR_8g104100 29.570 186 112 5 266 443 55 229 9.80e-18 83.6
MS.gene067179.t1 MTR_8g008530 25.701 214 152 4 260 473 312 518 2.23e-17 85.1
MS.gene067179.t1 MTR_6g008640 26.692 266 157 8 195 445 247 489 3.75e-17 84.3
MS.gene067179.t1 MTR_1g085680 22.072 444 293 13 41 469 106 511 6.39e-17 83.6
MS.gene067179.t1 MTR_5g034900 28.177 181 126 3 274 453 317 494 1.97e-16 82.0
MS.gene067179.t1 MTR_8g042000 23.571 420 266 13 64 466 135 516 3.67e-16 81.3
MS.gene067179.t1 MTR_5g070690 28.910 211 133 5 266 473 295 491 4.38e-16 80.9
MS.gene067179.t1 MTR_5g070800 28.910 211 133 5 266 473 295 491 4.38e-16 80.9
MS.gene067179.t1 MTR_4g104610 22.493 369 259 11 83 444 118 466 5.00e-16 80.9
MS.gene067179.t1 MTR_4g113650 29.319 191 128 4 276 466 328 511 6.47e-16 80.5
MS.gene067179.t1 MTR_5g070920 26.126 222 147 5 255 473 285 492 1.34e-15 79.3
MS.gene067179.t1 MTR_5g009110 24.262 305 194 11 73 362 1 283 2.81e-15 77.0
MS.gene067179.t1 MTR_8g042060 24.419 258 169 7 227 473 281 523 2.82e-15 78.6
MS.gene067179.t1 MTR_8g042060 25.097 259 167 8 227 473 244 487 3.03e-15 78.2
MS.gene067179.t1 MTR_4g088420 31.148 183 117 5 273 453 31 206 3.08e-15 75.5
MS.gene067179.t1 MTR_5g070710 22.849 372 248 11 109 473 151 490 3.80e-15 78.2
MS.gene067179.t1 MTR_4g071710 26.471 340 218 11 124 450 164 484 4.74e-15 77.8
MS.gene067179.t1 MTR_8g012585 27.523 218 148 5 261 474 238 449 5.98e-15 77.4
MS.gene067179.t1 MTR_1g015860 29.796 245 146 8 242 475 300 529 6.18e-15 77.4
MS.gene067179.t1 MTR_2g072270 20.098 408 284 11 69 466 140 515 7.28e-15 77.4
MS.gene067179.t1 MTR_6g084770 25.000 280 163 9 206 452 213 478 1.01e-14 76.6
MS.gene067179.t1 MTR_4g088195 24.138 348 223 14 117 451 159 478 1.05e-14 76.6
MS.gene067179.t1 MTR_1g035660 47.222 72 31 2 128 199 26 90 1.05e-14 71.6
MS.gene067179.t1 MTR_3g104560 28.936 235 143 7 251 475 182 402 1.18e-14 76.3
MS.gene067179.t1 MTR_0171s0020 24.211 285 186 8 175 447 210 476 1.21e-14 76.6
MS.gene067179.t1 MTR_2g023680 23.077 338 216 9 166 473 194 517 1.55e-14 76.3
MS.gene067179.t1 MTR_6g084900 25.339 221 151 3 236 452 30 240 1.71e-14 73.9
MS.gene067179.t1 MTR_8g042020 24.514 257 170 8 227 473 280 522 1.98e-14 75.9
MS.gene067179.t1 MTR_8g076290 26.741 359 209 20 85 424 127 450 2.45e-14 75.5
MS.gene067179.t1 MTR_8g469360 25.234 214 152 4 260 473 218 423 2.76e-14 75.1
MS.gene067179.t1 MTR_3g104560 28.936 235 143 7 251 475 317 537 3.44e-14 75.1
MS.gene067179.t1 MTR_5g007460 21.393 402 283 10 42 443 72 440 4.98e-14 74.3
MS.gene067179.t1 MTR_0022s0290 28.571 189 128 4 262 450 306 487 5.95e-14 74.3
MS.gene067179.t1 MTR_2g055430 25.758 198 139 3 276 473 328 517 5.97e-14 74.3
MS.gene067179.t1 MTR_6g008430 23.938 259 182 6 195 452 245 489 6.94e-14 74.3
MS.gene067179.t1 MTR_4g104570 28.324 173 109 4 276 444 4 165 7.62e-14 70.5
MS.gene067179.t1 MTR_4g077210 27.600 250 161 10 180 428 221 451 7.95e-14 73.9
MS.gene067179.t1 MTR_6g042610 24.324 259 174 7 195 445 241 485 8.99e-14 73.9
MS.gene067179.t1 MTR_7g055793 23.364 214 156 3 260 473 263 468 1.03e-13 73.6
MS.gene067179.t1 MTR_4g031820 30.719 153 92 4 320 466 376 520 1.19e-13 73.6
MS.gene067179.t1 MTR_7g055793 23.364 214 156 3 260 473 318 523 1.20e-13 73.6
MS.gene067179.t1 MTR_4g031820 30.719 153 92 4 320 466 354 498 1.31e-13 73.2
MS.gene067179.t1 MTR_2g072400 21.130 407 281 9 77 473 139 515 1.35e-13 73.2
MS.gene067179.t1 MTR_4g089055 24.603 378 242 14 83 450 142 486 2.36e-13 72.4
MS.gene067179.t1 MTR_2g055470 25.758 198 139 3 276 473 328 517 2.60e-13 72.4
MS.gene067179.t1 MTR_4g062510 24.742 194 126 6 265 450 306 487 2.77e-13 72.4
MS.gene067179.t1 MTR_1g107300 24.000 175 126 4 277 451 7 174 3.56e-13 68.9
MS.gene067179.t1 MTR_4g062500 24.125 257 183 8 200 451 235 484 4.67e-13 71.6
MS.gene067179.t1 MTR_4g104540 25.346 217 140 5 262 474 221 419 4.68e-13 71.2
MS.gene067179.t1 MTR_2g061200 24.583 240 152 6 252 473 300 528 6.47e-13 71.2
MS.gene067179.t1 MTR_5g070840 30.723 166 104 5 313 473 5 164 7.72e-13 67.4
MS.gene067179.t1 MTR_7g075610 29.282 181 109 7 276 450 307 474 7.79e-13 70.9
MS.gene067179.t1 MTR_5g070830 26.512 215 133 7 266 473 407 603 8.77e-13 70.9
MS.gene067179.t1 MTR_4g088160 22.741 343 226 13 117 447 159 474 9.23e-13 70.9
MS.gene067179.t1 MTR_0171s0010 28.652 178 109 6 276 447 313 478 1.15e-12 70.5
MS.gene067179.t1 MTR_4g018800 24.706 340 198 14 130 445 186 491 1.18e-12 70.5
MS.gene067179.t1 MTR_5g070700 25.188 266 174 9 214 473 247 493 1.28e-12 70.1
MS.gene067179.t1 MTR_5g018500 26.136 176 112 5 285 453 4 168 1.36e-12 67.0
MS.gene067179.t1 MTR_2g073480 25.551 227 152 6 228 450 171 384 1.43e-12 69.7
MS.gene067179.t1 MTR_2g073440 25.439 228 153 6 227 450 237 451 1.65e-12 69.7
MS.gene067179.t1 MTR_5g095230 20.306 458 307 16 33 473 97 513 1.91e-12 69.7
MS.gene067179.t1 MTR_7g098550 29.252 147 98 2 323 469 360 500 2.09e-12 69.7
MS.gene067179.t1 MTR_7g098550 29.252 147 98 2 323 469 352 492 2.21e-12 69.3
MS.gene067179.t1 MTR_7g075580 26.699 206 135 6 273 471 303 499 2.28e-12 69.3
MS.gene067179.t1 MTR_1g069200 23.558 208 151 3 264 471 310 509 3.37e-12 68.9
MS.gene067179.t1 MTR_5g045770 24.650 357 232 13 103 450 139 467 3.48e-12 68.9
MS.gene067179.t1 MTR_7g075540 29.101 189 105 7 273 450 301 471 3.91e-12 68.6
MS.gene067179.t1 MTR_2g072340 24.242 198 142 3 276 473 326 515 4.77e-12 68.6
MS.gene067179.t1 MTR_4g088170 22.571 350 228 14 117 451 159 480 6.73e-12 68.2
MS.gene067179.t1 MTR_6g022450 27.027 185 124 4 266 447 304 480 7.13e-12 67.8
MS.gene067179.t1 MTR_4g109470 25.000 268 170 9 195 452 230 476 7.23e-12 67.8
MS.gene067179.t1 MTR_6g035115 30.055 183 109 6 276 452 301 470 9.55e-12 67.4
MS.gene067179.t1 MTR_6g008630 26.178 191 124 4 261 445 222 401 1.02e-11 67.0
MS.gene067179.t1 MTR_1g035140 24.335 263 176 10 195 450 225 471 1.02e-11 67.4
MS.gene067179.t1 MTR_6g042540 23.774 265 169 8 195 446 241 485 1.10e-11 67.4
MS.gene067179.t1 MTR_4g088405 28.279 244 152 6 227 453 171 408 1.21e-11 67.0
MS.gene067179.t1 MTR_2g072310 25.628 199 138 4 276 473 161 350 1.48e-11 66.2
MS.gene067179.t1 MTR_2g450040 25.543 184 130 4 263 445 305 482 1.56e-11 67.0
MS.gene067179.t1 MTR_4g094775 28.090 178 116 5 266 443 292 457 1.69e-11 66.6
MS.gene067179.t1 MTR_1g022040 23.853 218 148 5 252 469 299 498 1.69e-11 66.6
MS.gene067179.t1 MTR_5g045250 24.314 255 170 10 193 443 249 484 1.93e-11 66.6
MS.gene067179.t1 MTR_2g072380 24.747 198 141 3 276 473 161 350 1.93e-11 65.9
MS.gene067179.t1 MTR_5g070973 26.708 161 109 4 316 473 10 164 2.00e-11 63.2
MS.gene067179.t1 MTR_4g026030 26.613 248 148 8 226 450 79 315 2.64e-11 65.5
MS.gene067179.t1 MTR_6g004570 37.500 104 58 3 214 311 10 112 3.33e-11 63.9
MS.gene067179.t1 MTR_8g012590 25.137 183 130 4 266 447 293 469 3.39e-11 65.9
MS.gene067179.t1 MTR_5g018980 25.532 235 151 8 220 444 251 471 3.51e-11 65.9
MS.gene067179.t1 MTR_2g065360 24.370 357 223 15 104 447 118 440 3.64e-11 65.5
MS.gene067179.t1 MTR_2g072380 24.747 198 141 3 276 473 301 490 3.67e-11 65.5
MS.gene067179.t1 MTR_3g020780 26.500 200 131 5 256 449 292 481 3.72e-11 65.5
MS.gene067179.t1 MTR_2g061740 27.568 185 114 7 35 204 9 188 4.13e-11 62.8
MS.gene067179.t1 MTR_3g057860 26.540 211 139 7 266 474 296 492 4.95e-11 65.1
MS.gene067179.t1 MTR_4g026080 26.776 183 117 5 273 450 1 171 5.28e-11 62.4
MS.gene067179.t1 MTR_4g078110 22.868 258 173 8 222 473 229 466 6.73e-11 64.7
MS.gene067179.t1 MTR_4g026200 25.664 226 147 7 229 450 259 467 8.25e-11 64.3
MS.gene067179.t1 MTR_5g470730 26.389 144 101 1 255 398 286 424 8.95e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067179.t1 AT2G23180 44.215 484 247 7 1 474 42 512 1.85e-139 411
MS.gene067179.t1 AT4G39490 42.710 487 259 6 1 476 41 518 3.31e-138 408
MS.gene067179.t1 AT1G57750 42.647 476 253 7 1 475 41 497 7.65e-134 396
MS.gene067179.t1 AT4G39480 42.072 473 257 6 12 476 52 515 4.22e-133 395
MS.gene067179.t1 AT4G39500 41.336 479 265 6 1 475 1 467 1.25e-130 387
MS.gene067179.t1 AT4G39500 41.336 479 265 6 1 475 51 517 9.12e-130 386
MS.gene067179.t1 AT4G32170 42.050 478 261 6 1 475 40 504 1.27e-126 378
MS.gene067179.t1 AT2G21910 41.408 483 262 8 1 476 40 508 9.84e-124 370
MS.gene067179.t1 AT1G47620 39.959 488 260 6 1 475 49 516 1.10e-123 370
MS.gene067179.t1 AT1G65340 40.292 479 262 6 1 473 42 502 1.36e-122 367
MS.gene067179.t1 AT4G39510 39.468 489 260 6 1 475 40 506 2.51e-121 364
MS.gene067179.t1 AT5G52320 39.583 480 263 6 1 473 42 501 9.60e-117 352
MS.gene067179.t1 AT5G52320 39.368 475 261 6 1 468 42 496 9.16e-115 347
MS.gene067179.t1 AT5G02900 39.794 485 247 11 1 475 31 480 1.23e-109 333
MS.gene067179.t1 AT1G24540 37.681 483 279 9 1 474 51 520 8.11e-104 320
MS.gene067179.t1 AT5G23190 36.626 486 285 10 1 476 70 542 5.66e-101 313
MS.gene067179.t1 AT1G57750 40.594 404 220 7 1 403 41 425 1.00e-100 309
MS.gene067179.t1 AT5G08250 37.475 491 273 11 1 476 9 480 1.97e-100 310
MS.gene067179.t1 AT5G08250 37.475 491 273 11 1 476 71 542 8.52e-100 310
MS.gene067179.t1 AT1G63710 35.950 484 284 9 2 474 39 507 1.93e-96 301
MS.gene067179.t1 AT3G26125 35.950 484 282 8 11 476 61 534 6.85e-96 300
MS.gene067179.t1 AT1G13150 35.146 478 285 10 10 476 56 519 1.15e-92 291
MS.gene067179.t1 AT1G13140 34.568 486 295 10 1 476 54 526 6.33e-92 289
MS.gene067179.t1 AT4G00360 34.845 485 292 9 2 474 39 511 9.74e-92 289
MS.gene067179.t1 AT2G45970 35.391 486 287 12 2 474 39 510 5.46e-91 287
MS.gene067179.t1 AT1G13140 34.021 485 273 10 1 476 54 500 8.57e-89 280
MS.gene067179.t1 AT1G01600 34.156 486 296 10 2 474 39 513 1.49e-87 278
MS.gene067179.t1 AT5G58860 32.784 485 296 9 2 474 42 508 3.59e-81 261
MS.gene067179.t1 AT1G34540 32.365 482 293 11 2 474 40 497 2.32e-76 248
MS.gene067179.t1 AT2G27690 34.305 446 252 12 36 472 71 484 3.65e-76 247
MS.gene067179.t1 AT3G56630 32.988 482 291 11 2 474 40 498 5.27e-76 247
MS.gene067179.t1 AT2G44890 34.152 448 271 10 26 466 70 500 2.13e-70 233
MS.gene067179.t1 AT5G63450 32.506 443 266 11 41 474 84 502 1.97e-69 230
MS.gene067179.t1 AT2G45510 35.167 418 252 8 41 452 81 485 6.42e-69 229
MS.gene067179.t1 AT5G63450 32.506 443 266 11 41 474 142 560 9.57e-69 229
MS.gene067179.t1 AT3G48520 31.603 443 271 9 41 475 82 500 2.21e-67 224
MS.gene067179.t1 AT2G44890 32.962 449 259 11 26 467 70 483 1.49e-65 219
MS.gene067179.t1 AT3G01900 31.448 442 266 11 41 474 78 490 3.26e-65 218
MS.gene067179.t1 AT1G69500 31.197 468 281 10 38 475 68 524 1.07e-58 202
MS.gene067179.t1 AT3G53130 24.777 448 297 16 39 474 120 539 2.02e-29 121
MS.gene067179.t1 AT1G31800 25.926 459 305 18 24 475 140 570 3.36e-28 118
MS.gene067179.t1 AT5G24900 28.708 209 139 5 264 471 208 407 2.30e-20 93.6
MS.gene067179.t1 AT5G24900 28.571 210 140 5 263 471 324 524 5.42e-20 93.2
MS.gene067179.t1 AT2G26710 31.443 194 126 4 276 469 324 510 2.37e-19 91.3
MS.gene067179.t1 AT3G48300 24.112 394 257 13 83 469 119 477 7.34e-19 89.4
MS.gene067179.t1 AT3G48300 24.112 394 257 13 83 469 121 479 7.40e-19 89.4
MS.gene067179.t1 AT5G52400 28.512 242 155 6 229 467 286 512 9.71e-19 89.4
MS.gene067179.t1 AT1G64940 25.397 252 179 5 227 474 262 508 6.14e-18 86.7
MS.gene067179.t1 AT5G51900 35.461 141 84 3 181 314 1 141 7.96e-18 83.2
MS.gene067179.t1 AT5G51900 41.538 65 38 0 411 475 176 240 7.67e-11 62.8
MS.gene067179.t1 AT1G64950 23.148 324 238 5 156 474 190 507 1.44e-17 85.5
MS.gene067179.t1 AT4G13310 25.668 374 233 14 83 444 122 462 1.58e-17 85.5
MS.gene067179.t1 AT5G24910 25.822 213 148 5 263 474 329 532 1.27e-16 82.8
MS.gene067179.t1 AT4G27710 23.974 463 290 17 24 469 95 512 2.70e-16 81.6
MS.gene067179.t1 AT5G57260 23.797 374 259 14 85 453 122 474 3.82e-16 81.3
MS.gene067179.t1 AT5G05260 23.057 386 255 13 83 450 134 495 4.86e-16 80.9
MS.gene067179.t1 AT3G14650 23.736 455 300 17 20 466 89 504 6.59e-16 80.5
MS.gene067179.t1 AT2G46950 22.222 432 298 10 44 469 166 565 7.74e-16 80.5
MS.gene067179.t1 AT3G48270 24.121 199 133 4 262 452 277 465 1.19e-15 79.7
MS.gene067179.t1 AT2G45580 25.352 355 225 15 111 451 2 330 1.30e-15 78.6
MS.gene067179.t1 AT3G14640 23.333 420 274 13 59 466 145 528 1.45e-15 79.7
MS.gene067179.t1 AT3G14640 23.333 420 274 13 59 466 123 506 1.46e-15 79.3
MS.gene067179.t1 AT3G14680 27.935 247 165 7 230 473 275 511 1.73e-15 79.3
MS.gene067179.t1 AT5G35715 29.630 189 117 5 269 453 234 410 1.83e-15 79.0
MS.gene067179.t1 AT2G45580 24.868 378 243 16 88 451 134 484 2.01e-15 79.0
MS.gene067179.t1 AT3G25180 26.339 224 149 6 229 448 267 478 2.31e-15 79.0
MS.gene067179.t1 AT1G67110 28.708 209 137 5 262 469 308 505 2.51e-15 78.6
MS.gene067179.t1 AT2G12190 22.741 321 235 6 156 469 190 504 3.55e-15 78.2
MS.gene067179.t1 AT5G38450 31.081 148 95 3 323 469 370 511 3.63e-15 78.2
MS.gene067179.t1 AT3G03470 26.407 231 159 5 251 474 283 509 3.77e-15 78.2
MS.gene067179.t1 AT3G14660 27.642 246 153 7 230 466 129 358 3.88e-15 77.4
MS.gene067179.t1 AT2G46960 27.160 243 161 9 231 469 166 396 4.58e-15 77.4
MS.gene067179.t1 AT2G46960 27.160 243 161 9 231 469 282 512 5.99e-15 77.4
MS.gene067179.t1 AT3G14660 27.642 246 153 7 230 466 275 504 9.19e-15 77.0
MS.gene067179.t1 AT4G15350 28.814 236 137 9 256 476 285 504 2.42e-14 75.5
MS.gene067179.t1 AT3G14690 27.660 235 150 7 240 473 296 511 2.51e-14 75.5
MS.gene067179.t1 AT3G14690 27.660 235 150 7 240 473 331 546 2.68e-14 75.5
MS.gene067179.t1 AT4G13290 30.058 173 107 4 276 444 293 455 4.66e-14 74.7
MS.gene067179.t1 AT1G64930 26.293 232 161 6 249 475 284 510 5.18e-14 74.7
MS.gene067179.t1 AT2G27000 23.659 410 266 14 83 476 130 508 5.45e-14 74.7
MS.gene067179.t1 AT3G14610 29.442 197 120 6 276 466 321 504 1.88e-13 72.8
MS.gene067179.t1 AT2G45550 23.500 400 261 16 85 473 131 496 1.97e-13 72.8
MS.gene067179.t1 AT3G20120 25.984 254 152 8 202 443 109 338 2.24e-13 72.0
MS.gene067179.t1 AT3G20120 25.984 254 152 8 202 443 109 338 2.24e-13 72.0
MS.gene067179.t1 AT3G20120 25.984 254 152 8 202 443 109 338 2.24e-13 72.0
MS.gene067179.t1 AT3G20950 25.664 339 204 16 120 443 174 479 2.27e-13 72.8
MS.gene067179.t1 AT1G33730 26.316 228 153 7 228 450 125 342 2.41e-13 71.6
MS.gene067179.t1 AT1G33730 26.316 228 153 7 228 450 125 342 2.41e-13 71.6
MS.gene067179.t1 AT3G20120 25.984 254 152 8 202 443 245 474 2.50e-13 72.4
MS.gene067179.t1 AT2G30770 26.882 186 128 3 268 450 287 467 2.82e-13 72.4
MS.gene067179.t1 AT3G20935 28.415 183 104 6 273 443 134 301 7.53e-13 70.1
MS.gene067179.t1 AT5G24950 22.802 364 251 10 85 444 124 461 8.01e-13 70.9
MS.gene067179.t1 AT3G20110 27.660 188 116 6 265 447 297 469 8.26e-13 70.9
MS.gene067179.t1 AT1G75130 29.299 157 102 3 310 466 348 495 1.07e-12 70.5
MS.gene067179.t1 AT1G01190 26.147 218 140 8 255 464 318 522 1.19e-12 70.5
MS.gene067179.t1 AT1G01190 26.147 218 140 8 255 464 313 517 1.51e-12 70.1
MS.gene067179.t1 AT5G47990 23.016 378 232 15 112 468 162 501 1.85e-12 69.7
MS.gene067179.t1 AT1G64900 26.378 254 176 6 227 475 258 505 2.13e-12 69.7
MS.gene067179.t1 AT1G13100 20.879 364 268 11 83 443 115 461 2.52e-12 69.3
MS.gene067179.t1 AT3G48280 25.000 188 127 3 266 449 281 458 2.73e-12 69.3
MS.gene067179.t1 AT3G26210 22.872 376 263 13 83 453 121 474 3.58e-12 68.9
MS.gene067179.t1 AT3G20100 33.071 127 69 4 326 443 356 475 4.49e-12 68.6
MS.gene067179.t1 AT3G26310 23.056 373 259 12 85 453 122 470 4.91e-12 68.6
MS.gene067179.t1 AT4G39950 25.000 228 161 7 227 452 328 547 7.51e-12 68.2
MS.gene067179.t1 AT1G33720 27.700 213 134 8 265 473 193 389 7.83e-12 67.4
MS.gene067179.t1 AT4G12320 21.799 289 210 7 180 464 224 500 8.11e-12 67.8
MS.gene067179.t1 AT1G33720 28.218 202 125 8 276 473 179 364 9.18e-12 67.0
MS.gene067179.t1 AT1G33720 28.218 202 125 8 276 473 179 364 9.18e-12 67.0
MS.gene067179.t1 AT1G33720 28.218 202 125 8 276 473 179 364 9.18e-12 67.0
MS.gene067179.t1 AT4G39950 25.000 228 161 7 227 452 288 507 9.30e-12 67.8
MS.gene067179.t1 AT2G46660 25.000 208 136 7 277 474 331 528 9.46e-12 67.8
MS.gene067179.t1 AT3G32047 25.000 320 198 13 139 447 188 476 1.05e-11 67.4
MS.gene067179.t1 AT3G20130 32.298 161 89 7 326 474 328 480 1.23e-11 67.0
MS.gene067179.t1 AT2G27010 27.179 195 115 6 265 447 276 455 1.23e-11 67.0
MS.gene067179.t1 AT1G50560 23.410 346 221 12 111 443 165 479 1.26e-11 67.0
MS.gene067179.t1 AT3G20130 32.298 161 89 7 326 474 356 508 1.60e-11 67.0
MS.gene067179.t1 AT2G14100 27.320 194 126 6 255 443 291 474 2.38e-11 66.2
MS.gene067179.t1 AT5G25140 21.563 371 265 13 85 453 121 467 2.49e-11 66.2
MS.gene067179.t1 AT1G13090 21.763 363 263 11 83 443 118 461 2.69e-11 66.2
MS.gene067179.t1 AT2G22330 25.114 219 154 7 227 443 313 523 5.49e-11 65.1
MS.gene067179.t1 AT3G26300 24.096 249 155 6 226 453 236 471 5.54e-11 65.1
MS.gene067179.t1 AT4G15360 30.323 155 86 5 301 449 340 478 5.71e-11 65.1
MS.gene067179.t1 AT2G22330 25.114 219 154 7 227 443 290 500 5.91e-11 65.1
MS.gene067179.t1 AT4G37340 24.597 248 149 8 185 428 227 440 6.85e-11 64.7
MS.gene067179.t1 AT1G12740 24.803 254 171 7 227 474 237 476 6.97e-11 64.7
MS.gene067179.t1 AT1G12740 25.200 250 169 7 227 474 243 476 7.55e-11 64.7
MS.gene067179.t1 AT1G12740 26.000 250 167 8 227 474 237 470 8.89e-11 64.3

Find 81 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATATTAACTTAGTATT+TGG 0.160957 1.2:+20862154 None:intergenic
TGTAACTTCCAAAAGCATTT+TGG 0.202551 1.2:+20862694 None:intergenic
ATCAAGTACCTGTGCACTTT+TGG 0.238468 1.2:+20862879 None:intergenic
TAGCATTGTTCAAATGAAAA+TGG 0.239889 1.2:-20861972 MS.gene067179:CDS
ATTCATTGCTCAAAGGAAAA+AGG 0.246694 1.2:-20862975 MS.gene067179:CDS
ATCACTGGTGAGAATAAAAT+TGG 0.261197 1.2:+20863140 None:intergenic
TGGGAAGAATGAAAGAAATA+TGG 0.264557 1.2:-20862120 MS.gene067179:CDS
CAGGTCTAAGTTGGTTCTTT+TGG 0.270623 1.2:-20862405 MS.gene067179:CDS
TCTTCTCTCTTCACCACCTT+TGG 0.276214 1.2:+20862585 None:intergenic
TCTTTCCCAAGACAACTTCT+AGG 0.281155 1.2:+20861998 None:intergenic
TCTAACACAGGAGGATAATT+TGG 0.303888 1.2:-20862323 MS.gene067179:CDS
ACTATATTCCAAAATGCTTT+TGG 0.305319 1.2:-20862702 MS.gene067179:CDS
CATGATCAAGAAATGGTAAT+AGG 0.333566 1.2:+20862905 None:intergenic
ACTCTCTTGGGTGCAGGAAA+TGG 0.361761 1.2:-20862439 MS.gene067179:CDS
AACTTGTAAGGAAGGCAATT+AGG 0.362311 1.2:+20862793 None:intergenic
TTATACATTTGGACAAGAAT+TGG 0.365140 1.2:+20862614 None:intergenic
AATAAACTAGCGTACCTTCA+TGG 0.375478 1.2:-20862274 MS.gene067179:CDS
GGTTACAAAATCATGAAGAT+TGG 0.380711 1.2:+20863224 None:intergenic
TTTGGAATAAGTTATACATT+TGG 0.381899 1.2:+20862603 None:intergenic
GGGAATTCATTGAACTTGTA+AGG 0.385773 1.2:+20862781 None:intergenic
TCTCCACTAGGTAGTATATC+AGG 0.393729 1.2:+20862187 None:intergenic
ACCTTAGGATTGAAACTTTG+TGG 0.398887 1.2:-20863204 MS.gene067179:CDS
GATTGATTATGCAAAACTAA+TGG 0.408276 1.2:+20863246 None:intergenic
TCAATTTGGATTTCGAAGAA+TGG 0.424723 1.2:-20863020 MS.gene067179:CDS
CTTGCTAAAGGAACTAATGA+AGG 0.426314 1.2:-20862521 MS.gene067179:CDS
ATTGCACACTTGTGCTGAAA+TGG 0.427516 1.2:+20862214 None:intergenic
GGGAAGAATGAAAGAAATAT+GGG 0.432061 1.2:-20862119 MS.gene067179:CDS
AGACACTGCATTCACTCTCT+TGG 0.432798 1.2:-20862452 MS.gene067179:CDS
AATATTCTCTTTGTATGCAA+TGG 0.432806 1.2:-20862140 MS.gene067179:CDS
CAGTTAGTTCAGGTCTAAGT+TGG 0.438031 1.2:-20862414 MS.gene067179:CDS
ATATTCTCTTTGTATGCAAT+GGG 0.442104 1.2:-20862139 MS.gene067179:CDS
TTGGATGCATGATCAAGAAA+TGG 0.444210 1.2:+20862898 None:intergenic
GGAACTAATGAAGGAAGGCT+TGG 0.445551 1.2:-20862512 MS.gene067179:CDS
AGGCTTGGGAAATGAGGAAA+TGG 0.457759 1.2:-20862497 MS.gene067179:CDS
AAAAGCTATTTCTATGATTG+AGG 0.464681 1.2:-20862743 MS.gene067179:CDS
TCCACAAAGTTTCAATCCTA+AGG 0.466210 1.2:+20863203 None:intergenic
GACACTGCATTCACTCTCTT+GGG 0.468589 1.2:-20862451 MS.gene067179:CDS
TCTATCTGATATCCATCTCT+CGG 0.472790 1.2:+20862072 None:intergenic
TGGTTGCAGCTGCTATGTTA+TGG 0.484121 1.2:-20861952 MS.gene067179:CDS
GGAAATGGAACAGTTAGTTC+AGG 0.492446 1.2:-20862424 MS.gene067179:CDS
GAACTAATGAAGGAAGGCTT+GGG 0.501697 1.2:-20862511 MS.gene067179:CDS
GCATTCACTCTCTTGGGTGC+AGG 0.502247 1.2:-20862445 MS.gene067179:CDS
CGGAGAACAATAGAAACTCT+TGG 0.503905 1.2:+20861890 None:intergenic
ATTCATTGAACTTGTAAGGA+AGG 0.508025 1.2:+20862785 None:intergenic
GCAGGTCCTAGAAGTTGTCT+TGG 0.508533 1.2:-20862004 MS.gene067179:CDS
TCGAATTTAAGCCCGAGAGA+TGG 0.508943 1.2:-20862084 MS.gene067179:CDS
GAAGGAAGGCTTGGGAAATG+AGG 0.522843 1.2:-20862503 MS.gene067179:CDS
CAGGTCCTAGAAGTTGTCTT+GGG 0.528394 1.2:-20862003 MS.gene067179:CDS
ATTGTTCTCCGCATGGAACA+TGG 0.535313 1.2:-20861878 MS.gene067179:CDS
TGTTTCAACTCATCCCATAG+TGG 0.538557 1.2:-20862380 MS.gene067179:CDS
CAAAATGCATGTAATATCAA+AGG 0.541155 1.2:+20862831 None:intergenic
CTACTTCATTCATTGCTCAA+AGG 0.558483 1.2:-20862982 MS.gene067179:CDS
TTTCACATTCAAGTTGTGGA+AGG 0.561453 1.2:-20861926 MS.gene067179:CDS
GAGAGATGGATATCAGATAG+AGG 0.562636 1.2:-20862070 MS.gene067179:CDS
CTAAAGGAACTAATGAAGGA+AGG 0.563022 1.2:-20862517 MS.gene067179:CDS
AAGTTCATAGCATTCAATGC+AGG 0.568382 1.2:-20862022 MS.gene067179:CDS
AGTTTCTATTGTTCTCCGCA+TGG 0.568921 1.2:-20861885 MS.gene067179:CDS
CTATCTGATATCCATCTCTC+GGG 0.571324 1.2:+20862073 None:intergenic
GAAGTTTCACATTCAAGTTG+TGG 0.577648 1.2:-20861930 MS.gene067179:CDS
TTGAGGATACGCTATTGTCT+AGG 0.581028 1.2:-20862726 MS.gene067179:CDS
GAGCTATATGTGAAGCATTG+AGG 0.586952 1.2:-20862252 MS.gene067179:CDS
AAATGTATAACTTATTCCAA+AGG 0.587319 1.2:-20862601 MS.gene067179:CDS
TGTATAACTTATTCCAAAGG+TGG 0.588935 1.2:-20862598 MS.gene067179:CDS
CACTTGTGCTGAAATGGTAC+AGG 0.591739 1.2:+20862220 None:intergenic
AAAAGATAATTGTCTAACAC+AGG 0.601430 1.2:-20862335 MS.gene067179:CDS
TTGGCAATGTTTGTGAACCA+AGG 0.605219 1.2:+20863159 None:intergenic
TCGAAGAATGGAAACAAGAG+AGG 0.613478 1.2:-20863008 MS.gene067179:CDS
TCATGCATCCAAAAGTGCAC+AGG 0.614274 1.2:-20862887 MS.gene067179:CDS
GAGAGAAGAAGATTGCGAAA+CGG 0.615056 1.2:-20862571 MS.gene067179:CDS
AGGTCAAGAGAAGAAGTACA+TGG 0.620922 1.2:-20862656 MS.gene067179:CDS
AATGCTATGAACTTGTAAGA+TGG 0.621257 1.2:+20862031 None:intergenic
ATGCACATTCGAATGATCAC+TGG 0.621383 1.2:+20863125 None:intergenic
CTTCACATATAGCTCCATGA+AGG 0.626592 1.2:+20862260 None:intergenic
ATTTACAAGATATTCTTGAG+AGG 0.629888 1.2:-20862858 MS.gene067179:CDS
CTTTGAATCCATGTTCCATG+CGG 0.633250 1.2:+20861870 None:intergenic
AAACCTGATATACTACCTAG+TGG 0.634744 1.2:-20862190 MS.gene067179:CDS
TTGTGCTGAAATGGTACAGG+AGG 0.637198 1.2:+20862223 None:intergenic
GGTTTAACATAATCTCCACT+AGG 0.640391 1.2:+20862175 None:intergenic
AGATAATTGTCTAACACAGG+AGG 0.649283 1.2:-20862332 MS.gene067179:CDS
GGAAGAATGAAAGAAATATG+GGG 0.664779 1.2:-20862118 MS.gene067179:CDS
TTAGGATTGAAACTTTGTGG+AGG 0.667140 1.2:-20863201 MS.gene067179:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTATAACTTATTCCAA+AGG - chr1.2:20862495-20862514 MS.gene067179:CDS 20.0%
!! CAAAAACATCAAAAATTTCA+AGG + chr1.2:20862044-20862063 None:intergenic 20.0%
!! GAGAATATTAACTTAGTATT+TGG + chr1.2:20862945-20862964 None:intergenic 20.0%
!!! ATTACATGCATTTTGTTATT+TGG - chr1.2:20862273-20862292 MS.gene067179:CDS 20.0%
!!! CTTGAAATTTTTGATGTTTT+TGG - chr1.2:20862042-20862061 MS.gene067179:CDS 20.0%
!!! TTTGGAATAAGTTATACATT+TGG + chr1.2:20862496-20862515 None:intergenic 20.0%
! AAAAGATAATTGTCTAACAC+AGG - chr1.2:20862761-20862780 MS.gene067179:CDS 25.0%
! AATATTCTCTTTGTATGCAA+TGG - chr1.2:20862956-20862975 MS.gene067179:CDS 25.0%
! ATATTCTCTTTGTATGCAAT+GGG - chr1.2:20862957-20862976 MS.gene067179:CDS 25.0%
! ATTTACAAGATATTCTTGAG+AGG - chr1.2:20862238-20862257 MS.gene067179:CDS 25.0%
! CAAAATGCATGTAATATCAA+AGG + chr1.2:20862268-20862287 None:intergenic 25.0%
! GATTGATTATGCAAAACTAA+TGG + chr1.2:20861853-20861872 None:intergenic 25.0%
! TAGCATTGTTCAAATGAAAA+TGG - chr1.2:20863124-20863143 MS.gene067179:CDS 25.0%
! TTACAAAAATGGCTACAAAT+AGG - chr1.2:20862420-20862439 MS.gene067179:CDS 25.0%
! TTATACATTTGGACAAGAAT+TGG + chr1.2:20862485-20862504 None:intergenic 25.0%
!! ACTATATTCCAAAATGCTTT+TGG - chr1.2:20862394-20862413 MS.gene067179:CDS 25.0%
!!! AAAAGCTATTTCTATGATTG+AGG - chr1.2:20862353-20862372 MS.gene067179:CDS 25.0%
!!! AAGCAATTTTTACTTGCTAA+AGG - chr1.2:20862563-20862582 MS.gene067179:CDS 25.0%
!!! AATTATTTTAGCTTCCACTA+TGG + chr1.2:20862733-20862752 None:intergenic 25.0%
!!! ATTATTTTAGCTTCCACTAT+GGG + chr1.2:20862732-20862751 None:intergenic 25.0%
!!! CTTTTGAATGTTTTGTTGAA+AGG + chr1.2:20862157-20862176 None:intergenic 25.0%
!!! TGGTGTTAGTATTTTCAATT+TGG - chr1.2:20862062-20862081 MS.gene067179:CDS 25.0%
AATGCTATGAACTTGTAAGA+TGG + chr1.2:20863068-20863087 None:intergenic 30.0%
ATCACTGGTGAGAATAAAAT+TGG + chr1.2:20861959-20861978 None:intergenic 30.0%
ATTCATTGAACTTGTAAGGA+AGG + chr1.2:20862314-20862333 None:intergenic 30.0%
ATTCATTGCTCAAAGGAAAA+AGG - chr1.2:20862121-20862140 MS.gene067179:CDS 30.0%
CATGATCAAGAAATGGTAAT+AGG + chr1.2:20862194-20862213 None:intergenic 30.0%
GGAAGAATGAAAGAAATATG+GGG - chr1.2:20862978-20862997 MS.gene067179:CDS 30.0%
GGGAAGAATGAAAGAAATAT+GGG - chr1.2:20862977-20862996 MS.gene067179:CDS 30.0%
GGTTACAAAATCATGAAGAT+TGG + chr1.2:20861875-20861894 None:intergenic 30.0%
TCAATTTGGATTTCGAAGAA+TGG - chr1.2:20862076-20862095 MS.gene067179:CDS 30.0%
TGGGAAGAATGAAAGAAATA+TGG - chr1.2:20862976-20862995 MS.gene067179:CDS 30.0%
TGTATAACTTATTCCAAAGG+TGG - chr1.2:20862498-20862517 MS.gene067179:CDS 30.0%
! CTTCATGATTTTGTAACCTT+AGG - chr1.2:20861877-20861896 MS.gene067179:CDS 30.0%
!! AATTTTAGCAACTATGGGAA+AGG - chr1.2:20862009-20862028 MS.gene067179:CDS 30.0%
!! AGCAAGAATTTTAGCAACTA+TGG - chr1.2:20862003-20862022 MS.gene067179:CDS 30.0%
!! CTTTTCATTTTAAAGGACCT+TGG - chr1.2:20861920-20861939 MS.gene067179:CDS 30.0%
!! GCAAGAATTTTAGCAACTAT+GGG - chr1.2:20862004-20862023 MS.gene067179:CDS 30.0%
!! GCTTTTGGAAGTTACAAAAA+TGG - chr1.2:20862409-20862428 MS.gene067179:CDS 30.0%
!!! TGTAACTTCCAAAAGCATTT+TGG + chr1.2:20862405-20862424 None:intergenic 30.0%
AAACCTGATATACTACCTAG+TGG - chr1.2:20862906-20862925 MS.gene067179:CDS 35.0%
AACTTGTAAGGAAGGCAATT+AGG + chr1.2:20862306-20862325 None:intergenic 35.0%
AAGTTCATAGCATTCAATGC+AGG - chr1.2:20863074-20863093 MS.gene067179:CDS 35.0%
AATAAACTAGCGTACCTTCA+TGG - chr1.2:20862822-20862841 MS.gene067179:CDS 35.0%
ACCTTAGGATTGAAACTTTG+TGG - chr1.2:20861892-20861911 MS.gene067179:CDS 35.0%
AGATAATTGTCTAACACAGG+AGG - chr1.2:20862764-20862783 MS.gene067179:CDS 35.0%
CTAAAGGAACTAATGAAGGA+AGG - chr1.2:20862579-20862598 MS.gene067179:CDS 35.0%
CTACTTCATTCATTGCTCAA+AGG - chr1.2:20862114-20862133 MS.gene067179:CDS 35.0%
CTTGCTAAAGGAACTAATGA+AGG - chr1.2:20862575-20862594 MS.gene067179:CDS 35.0%
GGGAATTCATTGAACTTGTA+AGG + chr1.2:20862318-20862337 None:intergenic 35.0%
GGTTTAACATAATCTCCACT+AGG + chr1.2:20862924-20862943 None:intergenic 35.0%
TCCACAAAGTTTCAATCCTA+AGG + chr1.2:20861896-20861915 None:intergenic 35.0%
TCTAACACAGGAGGATAATT+TGG - chr1.2:20862773-20862792 MS.gene067179:CDS 35.0%
TCTATCTGATATCCATCTCT+CGG + chr1.2:20863027-20863046 None:intergenic 35.0%
TTAGGATTGAAACTTTGTGG+AGG - chr1.2:20861895-20861914 MS.gene067179:CDS 35.0%
TTGGATGCATGATCAAGAAA+TGG + chr1.2:20862201-20862220 None:intergenic 35.0%
! CTTTTACATGAGCAATCTCT+GGG + chr1.2:20862338-20862357 None:intergenic 35.0%
!! GAAGTTTCACATTCAAGTTG+TGG - chr1.2:20863166-20863185 MS.gene067179:CDS 35.0%
!! TTTCACATTCAAGTTGTGGA+AGG - chr1.2:20863170-20863189 MS.gene067179:CDS 35.0%
!!! GGAGGCACTTTTCATTTTAA+AGG - chr1.2:20861913-20861932 MS.gene067179:CDS 35.0%
AGTTTCTATTGTTCTCCGCA+TGG - chr1.2:20863211-20863230 MS.gene067179:CDS 40.0%
ATGCACATTCGAATGATCAC+TGG + chr1.2:20861974-20861993 None:intergenic 40.0%
ATTGCACACTTGTGCTGAAA+TGG + chr1.2:20862885-20862904 None:intergenic 40.0%
CAGTTAGTTCAGGTCTAAGT+TGG - chr1.2:20862682-20862701 MS.gene067179:CDS 40.0%
CGGAGAACAATAGAAACTCT+TGG + chr1.2:20863209-20863228 None:intergenic 40.0%
CTATCTGATATCCATCTCTC+GGG + chr1.2:20863026-20863045 None:intergenic 40.0%
CTTCACATATAGCTCCATGA+AGG + chr1.2:20862839-20862858 None:intergenic 40.0%
CTTTGAATCCATGTTCCATG+CGG + chr1.2:20863229-20863248 None:intergenic 40.0%
GAACTAATGAAGGAAGGCTT+GGG - chr1.2:20862585-20862604 MS.gene067179:CDS 40.0%
GAGAGAAGAAGATTGCGAAA+CGG - chr1.2:20862525-20862544 MS.gene067179:CDS 40.0%
GAGAGATGGATATCAGATAG+AGG - chr1.2:20863026-20863045 MS.gene067179:CDS 40.0%
GGAAATGGAACAGTTAGTTC+AGG - chr1.2:20862672-20862691 MS.gene067179:CDS 40.0%
TCGAAGAATGGAAACAAGAG+AGG - chr1.2:20862088-20862107 MS.gene067179:CDS 40.0%
TCTCCACTAGGTAGTATATC+AGG + chr1.2:20862912-20862931 None:intergenic 40.0%
TCTTTCCCAAGACAACTTCT+AGG + chr1.2:20863101-20863120 None:intergenic 40.0%
TGTTTCAACTCATCCCATAG+TGG - chr1.2:20862716-20862735 MS.gene067179:CDS 40.0%
TTGAGGATACGCTATTGTCT+AGG - chr1.2:20862370-20862389 MS.gene067179:CDS 40.0%
TTGGCAATGTTTGTGAACCA+AGG + chr1.2:20861940-20861959 None:intergenic 40.0%
! AGGTCAAGAGAAGAAGTACA+TGG - chr1.2:20862440-20862459 MS.gene067179:CDS 40.0%
! ATCAAGTACCTGTGCACTTT+TGG + chr1.2:20862220-20862239 None:intergenic 40.0%
! GCTTTTACATGAGCAATCTC+TGG + chr1.2:20862339-20862358 None:intergenic 40.0%
!! GAGCTATATGTGAAGCATTG+AGG - chr1.2:20862844-20862863 MS.gene067179:CDS 40.0%
!!! CAGGTCTAAGTTGGTTCTTT+TGG - chr1.2:20862691-20862710 MS.gene067179:CDS 40.0%
AGACACTGCATTCACTCTCT+TGG - chr1.2:20862644-20862663 MS.gene067179:CDS 45.0%
AGGCTTGGGAAATGAGGAAA+TGG - chr1.2:20862599-20862618 MS.gene067179:CDS 45.0%
ATTGTTCTCCGCATGGAACA+TGG - chr1.2:20863218-20863237 MS.gene067179:CDS 45.0%
CACTTGTGCTGAAATGGTAC+AGG + chr1.2:20862879-20862898 None:intergenic 45.0%
CAGGTCCTAGAAGTTGTCTT+GGG - chr1.2:20863093-20863112 MS.gene067179:CDS 45.0%
GACACTGCATTCACTCTCTT+GGG - chr1.2:20862645-20862664 MS.gene067179:CDS 45.0%
GGAACTAATGAAGGAAGGCT+TGG - chr1.2:20862584-20862603 MS.gene067179:CDS 45.0%
TCGAATTTAAGCCCGAGAGA+TGG - chr1.2:20863012-20863031 MS.gene067179:CDS 45.0%
TCTTCTCTCTTCACCACCTT+TGG + chr1.2:20862514-20862533 None:intergenic 45.0%
TGGTTGCAGCTGCTATGTTA+TGG - chr1.2:20863144-20863163 MS.gene067179:CDS 45.0%
TTGTGCTGAAATGGTACAGG+AGG + chr1.2:20862876-20862895 None:intergenic 45.0%
! TCATGCATCCAAAAGTGCAC+AGG - chr1.2:20862209-20862228 MS.gene067179:CDS 45.0%
ACTCTCTTGGGTGCAGGAAA+TGG - chr1.2:20862657-20862676 MS.gene067179:CDS 50.0%
GAAGGAAGGCTTGGGAAATG+AGG - chr1.2:20862593-20862612 MS.gene067179:CDS 50.0%
GCAGGTCCTAGAAGTTGTCT+TGG - chr1.2:20863092-20863111 MS.gene067179:CDS 50.0%
GCATTCACTCTCTTGGGTGC+AGG - chr1.2:20862651-20862670 MS.gene067179:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 20861844 20863274 20861844 ID=MS.gene067179
chr1.2 mRNA 20861844 20863274 20861844 ID=MS.gene067179.t1;Parent=MS.gene067179
chr1.2 exon 20861844 20863274 20861844 ID=MS.gene067179.t1.exon1;Parent=MS.gene067179.t1
chr1.2 CDS 20861844 20863274 20861844 ID=cds.MS.gene067179.t1;Parent=MS.gene067179.t1
Gene Sequence

>MS.gene067179

ATGCTACCATTAGTTTTGCATAATCAATCCAATCTTCATGATTTTGTAACCTTAGGATTGAAACTTTGTGGAGGCACTTTTCATTTTAAAGGACCTTGGTTCACAAACATTGCCAATTTTATTCTCACCAGTGATCATTCGAATGTGCATCACATCACTAGCAAGAATTTTAGCAACTATGGGAAAGGAACTGATTTCCTTGAAATTTTTGATGTTTTTGGTGTTAGTATTTTCAATTTGGATTTCGAAGAATGGAAACAAGAGAGGACACTACTTCATTCATTGCTCAAAGGAAAAAGGTTTGAGATATCCTTTCAACAAAACATTCAAAAGAAGCTAGAGAATTGCCTATTACCATTTCTTGATCATGCATCCAAAAGTGCACAGGTACTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATTACATGCATTTTGTTATTTGGATTTGATCCTAATTGCCTTCCTTACAAGTTCAATGAATTCCCAGAGATTGCTCATGTAAAAGCTATTTCTATGATTGAGGATACGCTATTGTCTAGGCACTATATTCCAAAATGCTTTTGGAAGTTACAAAAATGGCTACAAATAGGTCAAGAGAAGAAGTACATGGTAGCTAAAGAAAATATTTACCAATTCTTGTCCAAATGTATAACTTATTCCAAAGGTGGTGAAGAGAGAAGAAGATTGCGAAACGGTGAAGATTTTGATGAAAGCAATTTTTACTTGCTAAAGGAACTAATGAAGGAAGGCTTGGGAAATGAGGAAATGGTTGAAAATGAAAAGTATATTAGAGACACTGCATTCACTCTCTTGGGTGCAGGAAATGGAACAGTTAGTTCAGGTCTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCCATAGTGGAAGCTAAAATAATTCAAGAGATAAAAGATAATTGTCTAACACAGGAGGATAATTTGGTCACTAACTTAAGAGTTGAAAAGCTTAATAAACTAGCGTACCTTCATGGAGCTATATGTGAAGCATTGAGGCTTTATCCTCCTGTACCATTTCAGCACAAGTGTGCAATCAAACCTGATATACTACCTAGTGGAGATTATGTTAAACCAAATACTAAGTTAATATTCTCTTTGTATGCAATGGGAAGAATGAAAGAAATATGGGGTAATGATCGCTTCGAATTTAAGCCCGAGAGATGGATATCAGATAGAGGACAAATTATACATGTACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCTAGAAGTTGTCTTGGGAAAGATATTAGCATTGTTCAAATGAAAATGGTTGCAGCTGCTATGTTATGGAAGTTTCACATTCAAGTTGTGGAAGGTCATTCTGTAACTCCAAGAGTTTCTATTGTTCTCCGCATGGAACATGGATTCAAAGTCAAAGTTAGTAAAAGATGCATTTAA
Protein sequence

>MS.gene067179.t1

MLPLVLHNQSNLHDFVTLGLKLCGGTFHFKGPWFTNIANFILTSDHSNVHHITSKNFSNYGKGTDFLEIFDVFGVSIFNLDFEEWKQERTLLHSLLKGKRFEISFQQNIQKKLENCLLPFLDHASKSAQVLDLQDILERFTFDITCILLFGFDPNCLPYKFNEFPEIAHVKAISMIEDTLLSRHYIPKCFWKLQKWLQIGQEKKYMVAKENIYQFLSKCITYSKGGEERRRLRNGEDFDESNFYLLKELMKEGLGNEEMVENEKYIRDTAFTLLGAGNGTVSSGLSWFFWLVSTHPIVEAKIIQEIKDNCLTQEDNLVTNLRVEKLNKLAYLHGAICEALRLYPPVPFQHKCAIKPDILPSGDYVKPNTKLIFSLYAMGRMKEIWGNDRFEFKPERWISDRGQIIHVPSYKFIAFNAGPRSCLGKDISIVQMKMVAAAMLWKFHIQVVEGHSVTPRVSIVLRMEHGFKVKVSKRCI