AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026330.t1 MTR_1g035670 92.262 504 25 1 1 490 1 504 0.0 966
MS.gene026330.t1 MTR_1g036130 82.087 508 73 3 1 490 1 508 0.0 845
MS.gene026330.t1 MTR_1g035760 80.754 504 60 2 1 490 1 481 0.0 827
MS.gene026330.t1 MTR_1g036010 70.980 510 127 5 1 490 1 509 0.0 751
MS.gene026330.t1 MTR_1g035860 82.989 435 60 1 10 430 16 450 0.0 747
MS.gene026330.t1 MTR_1g035830 70.923 509 129 4 1 490 1 509 0.0 743
MS.gene026330.t1 MTR_1g035940 69.412 510 135 5 1 490 1 509 0.0 731
MS.gene026330.t1 MTR_1g035750 62.795 508 170 4 1 490 1 507 0.0 660
MS.gene026330.t1 MTR_1g035580 61.400 500 181 6 1 490 1 498 0.0 629
MS.gene026330.t1 MTR_1g069715 74.693 407 83 4 84 470 1 407 0.0 627
MS.gene026330.t1 MTR_1g035790 58.498 506 192 4 1 490 1 504 0.0 615
MS.gene026330.t1 MTR_1g036200 59.363 502 175 6 10 490 8 501 0.0 604
MS.gene026330.t1 MTR_1g050362 58.367 502 185 6 10 489 8 507 0.0 599
MS.gene026330.t1 MTR_1g036270 56.505 515 197 7 1 490 1 513 0.0 598
MS.gene026330.t1 MTR_1g035800 57.310 513 193 6 1 488 1 512 0.0 580
MS.gene026330.t1 MTR_8g088470 52.834 494 208 5 11 488 7 491 0.0 546
MS.gene026330.t1 MTR_7g033580 53.320 497 206 6 10 490 10 496 0.0 539
MS.gene026330.t1 MTR_7g033570 51.710 497 214 7 10 490 10 496 0.0 530
MS.gene026330.t1 MTR_6g004630 48.718 507 235 7 2 490 6 505 1.79e-171 493
MS.gene026330.t1 MTR_6g004670 50.000 474 217 5 32 488 35 505 4.08e-170 489
MS.gene026330.t1 MTR_6g004610 49.462 465 216 4 39 487 1 462 1.91e-164 474
MS.gene026330.t1 MTR_6g004600 45.941 505 243 5 13 490 16 517 1.76e-160 465
MS.gene026330.t1 MTR_6g004590 45.068 517 254 6 1 490 4 517 6.42e-160 464
MS.gene026330.t1 MTR_1g037560 39.627 482 263 6 33 489 66 544 5.31e-124 373
MS.gene026330.t1 MTR_1g037550 39.712 486 261 7 33 489 66 548 1.01e-122 370
MS.gene026330.t1 MTR_4g075110 38.431 510 284 8 4 488 45 549 1.15e-121 367
MS.gene026330.t1 MTR_8g030590 34.884 516 294 9 6 488 4 510 8.62e-96 300
MS.gene026330.t1 MTR_8g098435 34.816 517 290 9 1 488 7 505 1.02e-93 294
MS.gene026330.t1 MTR_5g070010 34.286 490 280 7 30 488 30 508 1.08e-92 291
MS.gene026330.t1 MTR_4g012320 57.534 219 79 1 286 490 7 225 2.38e-90 275
MS.gene026330.t1 MTR_3g463060 35.282 479 279 9 30 488 35 502 3.97e-89 282
MS.gene026330.t1 MTR_7g096340 36.111 432 249 11 75 489 82 503 5.23e-83 266
MS.gene026330.t1 MTR_1g070345 35.208 480 276 13 31 489 40 505 8.84e-83 265
MS.gene026330.t1 MTR_1g070365 37.838 444 248 10 62 488 72 504 1.13e-82 265
MS.gene026330.t1 MTR_7g088330 33.398 515 299 12 2 488 10 508 2.47e-82 264
MS.gene026330.t1 MTR_3g080580 32.800 500 276 11 30 489 39 518 2.62e-80 259
MS.gene026330.t1 MTR_8g035860 33.532 504 297 12 10 488 19 509 2.69e-79 256
MS.gene026330.t1 MTR_8g035820 34.375 480 277 11 35 488 42 509 5.49e-79 255
MS.gene026330.t1 MTR_8g035810 32.937 504 301 12 10 488 19 510 1.46e-78 254
MS.gene026330.t1 MTR_7g029275 32.848 481 290 11 30 488 39 508 2.26e-78 254
MS.gene026330.t1 MTR_7g096320 35.185 432 253 12 75 489 83 504 4.00e-78 253
MS.gene026330.t1 MTR_4g054920 34.607 445 234 12 80 488 93 516 6.51e-76 248
MS.gene026330.t1 MTR_8g035780 35.068 442 249 10 76 489 80 511 4.83e-75 245
MS.gene026330.t1 MTR_6g084040 63.043 184 48 3 1 183 1 165 9.30e-74 230
MS.gene026330.t1 MTR_1g060550 33.172 413 223 8 78 461 93 481 4.87e-69 229
MS.gene026330.t1 MTR_2g086040 32.949 434 241 10 80 488 90 498 6.06e-69 229
MS.gene026330.t1 MTR_7g406990 36.364 352 199 7 33 363 49 396 1.08e-68 226
MS.gene026330.t1 MTR_4g119660 28.788 528 316 11 9 489 2 516 1.33e-68 228
MS.gene026330.t1 MTR_5g019140 29.679 529 313 12 7 489 16 531 1.50e-68 228
MS.gene026330.t1 MTR_8g035760 29.622 476 300 10 35 488 49 511 2.46e-66 222
MS.gene026330.t1 MTR_1g102220 30.979 439 269 9 74 488 78 506 5.84e-66 221
MS.gene026330.t1 MTR_8g035680 29.228 479 299 12 35 488 49 512 1.57e-64 218
MS.gene026330.t1 MTR_8g035810 32.063 446 267 11 10 431 19 452 4.03e-64 215
MS.gene026330.t1 MTR_1g040110 75.676 111 27 0 126 236 57 167 2.40e-57 188
MS.gene026330.t1 MTR_1g050590 75.862 116 14 1 250 351 3 118 1.00e-53 176
MS.gene026330.t1 MTR_8g035680 30.458 371 224 8 142 488 5 365 1.92e-51 179
MS.gene026330.t1 MTR_8g035810 30.343 379 223 11 10 361 19 383 4.78e-44 160
MS.gene026330.t1 MTR_1g036140 84.884 86 13 0 252 337 69 154 6.02e-43 150
MS.gene026330.t1 MTR_1g036140 80.882 68 13 0 1 68 1 68 2.36e-31 119
MS.gene026330.t1 MTR_1g070370 37.903 248 134 5 169 406 5 242 9.23e-41 147
MS.gene026330.t1 MTR_1g102210 30.793 328 203 10 168 488 51 361 4.40e-37 140
MS.gene026330.t1 MTR_7g079440 26.432 454 285 16 61 488 218 648 1.79e-34 137
MS.gene026330.t1 MTR_1g035660 53.982 113 36 3 161 273 21 117 3.86e-29 112
MS.gene026330.t1 MTR_7g079440 27.200 375 226 14 61 411 218 569 5.83e-26 111
MS.gene026330.t1 MTR_3g093530 24.112 394 268 11 109 487 146 523 1.29e-25 110
MS.gene026330.t1 MTR_5g009110 22.661 481 310 14 60 489 102 571 1.78e-25 110
MS.gene026330.t1 MTR_1g062190 22.538 457 308 14 57 488 104 539 4.66e-25 108
MS.gene026330.t1 MTR_7g006900 22.137 393 262 11 109 483 101 467 1.66e-22 100
MS.gene026330.t1 MTR_6g017325 22.308 390 265 9 109 483 136 502 2.39e-22 100
MS.gene026330.t1 MTR_1g101040 24.289 387 266 10 110 485 142 512 2.40e-22 100
MS.gene026330.t1 MTR_2g072270 24.893 466 287 18 46 483 88 518 6.12e-22 99.4
MS.gene026330.t1 MTR_2g062670 33.333 180 91 4 168 338 67 226 1.29e-21 98.2
MS.gene026330.t1 MTR_2g062670 33.333 171 64 4 168 338 283 403 1.77e-17 85.5
MS.gene026330.t1 MTR_0025s0110 22.049 449 302 14 59 485 101 523 1.54e-21 98.2
MS.gene026330.t1 MTR_1g085680 23.303 442 281 14 71 483 99 511 1.64e-21 97.8
MS.gene026330.t1 MTR_5g009110 22.506 431 275 13 110 489 1 423 1.07e-20 94.7
MS.gene026330.t1 MTR_6g008430 26.389 288 192 7 198 467 207 492 1.27e-20 95.1
MS.gene026330.t1 MTR_0147s0030 22.101 457 318 13 51 487 92 530 1.30e-20 95.1
MS.gene026330.t1 MTR_6g072490 23.711 388 269 10 109 485 139 510 1.61e-20 94.7
MS.gene026330.t1 MTR_8g035790 45.455 99 52 2 392 489 1 98 3.45e-20 85.9
MS.gene026330.t1 MTR_8g008530 24.505 404 254 15 109 487 141 518 4.76e-20 93.6
MS.gene026330.t1 MTR_8g046580 45.263 95 47 2 371 463 201 292 1.64e-19 89.4
MS.gene026330.t1 MTR_0181s0030 24.194 496 315 20 1 461 1 470 3.42e-19 90.9
MS.gene026330.t1 MTR_5g021390 23.750 480 317 17 11 464 28 484 3.43e-19 90.9
MS.gene026330.t1 MTR_6g008620 24.821 419 257 17 72 459 100 491 3.54e-19 90.9
MS.gene026330.t1 MTR_2g023680 22.573 412 264 10 105 487 132 517 4.19e-19 90.5
MS.gene026330.t1 MTR_1g101050 27.239 268 174 8 232 485 248 508 4.38e-19 90.5
MS.gene026330.t1 MTR_8g042000 23.503 451 283 15 59 480 99 516 4.91e-19 90.5
MS.gene026330.t1 MTR_4g071710 29.008 262 153 9 233 464 226 484 7.21e-19 89.7
MS.gene026330.t1 MTR_2g010320 25.450 389 250 14 125 488 130 503 7.71e-19 89.7
MS.gene026330.t1 MTR_8g469360 23.267 404 257 13 109 487 48 423 9.73e-19 89.0
MS.gene026330.t1 MTR_2g061200 23.844 411 273 10 104 487 131 528 1.02e-18 89.4
MS.gene026330.t1 MTR_4g018800 24.500 400 238 17 72 436 98 468 1.92e-18 88.6
MS.gene026330.t1 MTR_6g008530 25.000 240 162 4 237 459 257 495 3.59e-18 87.8
MS.gene026330.t1 MTR_6g008640 25.570 395 240 13 100 467 130 497 4.65e-18 87.4
MS.gene026330.t1 MTR_2g061750 30.851 188 104 6 78 247 15 194 5.68e-18 82.8
MS.gene026330.t1 MTR_5g009110 22.989 348 223 9 60 378 102 433 5.84e-18 86.7
MS.gene026330.t1 MTR_8g012585 25.283 265 178 6 242 488 187 449 6.47e-18 86.7
MS.gene026330.t1 MTR_6g042540 25.581 258 164 7 232 467 241 492 7.10e-18 86.7
MS.gene026330.t1 MTR_2g061740 30.851 188 104 6 78 247 15 194 8.34e-18 82.4
MS.gene026330.t1 MTR_4g104610 22.653 490 318 16 3 458 4 466 8.75e-18 86.3
MS.gene026330.t1 MTR_7g079440 26.298 289 179 10 61 335 218 486 1.21e-17 85.9
MS.gene026330.t1 MTR_5g070920 26.556 241 157 4 233 454 225 464 1.43e-17 85.9
MS.gene026330.t1 MTR_3g014880 26.667 255 166 8 232 467 248 500 1.94e-17 85.5
MS.gene026330.t1 MTR_8g076290 22.738 431 289 16 30 436 38 448 2.80e-17 84.7
MS.gene026330.t1 MTR_2g072340 22.418 455 298 16 59 487 90 515 2.92e-17 84.7
MS.gene026330.t1 MTR_8g098565 28.431 204 125 4 305 488 304 506 3.09e-17 84.7
MS.gene026330.t1 MTR_8g042020 25.899 278 172 8 234 487 255 522 3.77e-17 84.3
MS.gene026330.t1 MTR_2g072400 22.022 445 292 16 71 487 98 515 4.56e-17 84.3
MS.gene026330.t1 MTR_7g055793 22.151 465 307 14 48 487 89 523 4.72e-17 84.3
MS.gene026330.t1 MTR_7g055793 22.151 465 307 14 48 487 34 468 5.26e-17 84.0
MS.gene026330.t1 MTR_6g008500 25.506 247 162 7 232 459 258 501 5.70e-17 84.0
MS.gene026330.t1 MTR_0171s0020 27.907 258 155 8 227 461 227 476 7.15e-17 83.6
MS.gene026330.t1 MTR_1g022040 21.247 433 294 11 70 483 94 498 7.38e-17 83.6
MS.gene026330.t1 MTR_1g015860 23.519 540 331 23 3 489 19 529 8.25e-17 83.6
MS.gene026330.t1 MTR_6g008600 25.899 278 154 9 225 459 225 493 9.97e-17 83.2
MS.gene026330.t1 MTR_5g070690 26.667 240 155 4 237 458 231 467 1.28e-16 82.8
MS.gene026330.t1 MTR_5g070800 26.667 240 155 4 237 458 231 467 1.28e-16 82.8
MS.gene026330.t1 MTR_6g008650 24.297 391 252 13 100 467 130 499 1.30e-16 82.8
MS.gene026330.t1 MTR_4g104660 22.614 482 322 17 10 463 25 483 1.31e-16 82.8
MS.gene026330.t1 MTR_5g070830 26.210 248 156 6 233 457 335 578 1.47e-16 82.8
MS.gene026330.t1 MTR_8g042060 22.222 468 297 16 51 487 92 523 1.66e-16 82.4
MS.gene026330.t1 MTR_2g010380 25.183 409 260 15 114 488 113 509 1.84e-16 82.4
MS.gene026330.t1 MTR_6g084090 80.000 40 8 0 282 321 11 50 2.29e-16 73.6
MS.gene026330.t1 MTR_6g022450 25.694 288 184 8 216 487 225 498 2.61e-16 82.0
MS.gene026330.t1 MTR_2g010250 30.000 210 127 6 298 488 297 505 2.62e-16 81.6
MS.gene026330.t1 MTR_1g023730 23.925 372 246 12 119 464 122 482 2.91e-16 81.6
MS.gene026330.t1 MTR_4g104540 22.695 423 266 16 87 478 27 419 4.34e-16 80.9
MS.gene026330.t1 MTR_8g042060 24.436 266 169 7 243 483 225 483 7.17e-16 80.5
MS.gene026330.t1 MTR_6g042610 25.197 254 171 7 232 467 241 493 7.23e-16 80.5
MS.gene026330.t1 MTR_8g104030 26.250 240 149 5 237 454 8 241 9.08e-16 78.2
MS.gene026330.t1 MTR_7g087520 24.119 369 242 14 111 453 118 474 1.08e-15 80.1
MS.gene026330.t1 MTR_4g113650 22.462 463 309 14 43 483 80 514 1.57e-15 79.3
MS.gene026330.t1 MTR_5g070710 24.790 238 158 4 233 451 224 459 1.79e-15 79.3
MS.gene026330.t1 MTR_2g010330 29.817 218 130 6 293 488 291 507 1.87e-15 79.3
MS.gene026330.t1 MTR_4g089055 23.760 383 252 13 104 464 122 486 2.14e-15 79.0
MS.gene026330.t1 MTR_2g010280 30.000 210 127 5 298 488 295 503 2.60e-15 78.6
MS.gene026330.t1 MTR_2g062680 36.585 123 63 2 292 414 30 137 2.60e-15 74.7
MS.gene026330.t1 MTR_4g088400 27.165 254 158 8 232 467 250 494 3.28e-15 78.6
MS.gene026330.t1 MTR_0171s0030 26.255 259 158 8 227 461 139 388 3.28e-15 78.2
MS.gene026330.t1 MTR_2g010290 28.326 233 139 8 281 488 303 532 3.64e-15 78.2
MS.gene026330.t1 MTR_7g012860 25.403 248 164 7 233 464 229 471 3.77e-15 78.2
MS.gene026330.t1 MTR_0287s0060 25.403 248 164 7 233 464 229 471 3.77e-15 78.2
MS.gene026330.t1 MTR_4g089020 23.981 417 260 16 104 487 100 492 6.71e-15 77.4
MS.gene026330.t1 MTR_4g088425 27.016 248 167 5 232 467 233 478 7.66e-15 77.4
MS.gene026330.t1 MTR_4g088420 29.570 186 119 3 293 467 22 206 8.09e-15 74.3
MS.gene026330.t1 MTR_8g012590 23.132 281 191 7 222 487 217 487 9.46e-15 77.0
MS.gene026330.t1 MTR_7g103450 25.820 244 168 5 224 457 241 481 1.12e-14 76.6
MS.gene026330.t1 MTR_1g091003 23.844 411 250 16 77 461 90 463 1.37e-14 76.3
MS.gene026330.t1 MTR_1g069200 23.077 468 296 20 51 485 73 509 1.47e-14 76.3
MS.gene026330.t1 MTR_3g436540 25.483 259 169 7 222 464 230 480 2.85e-14 75.5
MS.gene026330.t1 MTR_7g098550 22.667 450 274 14 61 483 90 492 3.91e-14 75.1
MS.gene026330.t1 MTR_5g095290 23.416 363 233 15 122 464 134 471 4.79e-14 74.7
MS.gene026330.t1 MTR_7g098550 23.214 448 282 14 61 483 90 500 7.16e-14 74.3
MS.gene026330.t1 MTR_3g436390 25.271 277 182 9 233 490 231 501 7.21e-14 74.3
MS.gene026330.t1 MTR_0022s0290 24.000 400 242 14 104 464 111 487 8.03e-14 73.9
MS.gene026330.t1 MTR_1g091023 23.743 358 241 11 119 461 123 463 8.39e-14 73.9
MS.gene026330.t1 MTR_6g084900 24.464 233 151 6 242 454 1 228 9.75e-14 72.0
MS.gene026330.t1 MTR_5g034900 26.500 200 130 4 305 488 319 517 1.02e-13 73.9
MS.gene026330.t1 MTR_8g104100 27.957 186 114 4 290 461 50 229 1.11e-13 71.6
MS.gene026330.t1 MTR_3g076530 23.529 306 205 9 168 457 175 467 1.33e-13 73.6
MS.gene026330.t1 MTR_2g055430 20.700 343 233 9 166 487 193 517 1.58e-13 73.2
MS.gene026330.t1 MTR_6g084770 25.207 242 157 7 237 458 233 470 1.93e-13 72.8
MS.gene026330.t1 MTR_2g072310 23.358 274 188 7 232 487 81 350 2.29e-13 71.6
MS.gene026330.t1 MTR_5g094660 20.614 456 315 16 30 464 41 470 2.66e-13 72.4
MS.gene026330.t1 MTR_1g091010 26.667 225 144 7 249 461 247 462 3.34e-13 72.0
MS.gene026330.t1 MTR_5g009110 22.819 298 188 8 110 378 1 285 3.52e-13 70.9
MS.gene026330.t1 MTR_3g058220 22.410 473 306 18 24 464 29 472 4.02e-13 72.0
MS.gene026330.t1 MTR_3g104560 27.972 286 159 10 223 489 145 402 4.03e-13 71.2
MS.gene026330.t1 MTR_5g095260 23.611 360 237 14 122 464 134 472 5.33e-13 71.6
MS.gene026330.t1 MTR_3g058380 22.977 383 251 13 105 464 31 392 5.60e-13 71.2
MS.gene026330.t1 MTR_8g027040 25.616 203 134 5 302 488 344 545 5.71e-13 71.6
MS.gene026330.t1 MTR_5g470730 25.490 204 128 4 233 414 225 426 7.13e-13 70.9
MS.gene026330.t1 MTR_5g073250 24.096 249 171 6 229 464 228 471 7.64e-13 70.9
MS.gene026330.t1 MTR_5g091760 26.699 206 130 5 244 436 229 426 8.40e-13 70.9
MS.gene026330.t1 MTR_6g004570 38.095 105 52 4 242 333 1 105 1.24e-12 68.2
MS.gene026330.t1 MTR_3g104560 27.972 286 159 10 223 489 280 537 1.56e-12 70.1
MS.gene026330.t1 MTR_2g073480 23.451 226 157 5 249 464 165 384 1.60e-12 69.7
MS.gene026330.t1 MTR_7g056103 21.008 357 244 11 132 464 137 479 1.62e-12 70.1
MS.gene026330.t1 MTR_4g109470 25.896 251 140 9 232 453 230 463 2.26e-12 69.7
MS.gene026330.t1 MTR_2g073440 23.451 226 157 5 249 464 232 451 2.26e-12 69.3
MS.gene026330.t1 MTR_6g084060 71.429 35 10 0 59 93 19 53 2.80e-12 62.0
MS.gene026330.t1 MTR_4g094775 23.043 460 305 16 30 467 35 467 3.40e-12 68.9
MS.gene026330.t1 MTR_4g088160 20.811 370 240 12 122 461 128 474 4.41e-12 68.6
MS.gene026330.t1 MTR_5g018500 26.415 159 104 4 313 459 3 160 4.90e-12 65.5
MS.gene026330.t1 MTR_1g037370 22.378 286 199 6 169 436 157 437 5.26e-12 68.2
MS.gene026330.t1 MTR_5g019010 22.603 438 280 19 30 436 37 446 6.92e-12 68.2
MS.gene026330.t1 MTR_5g070840 31.452 124 84 1 335 458 18 140 7.05e-12 64.3
MS.gene026330.t1 MTR_7g092620 25.269 186 116 5 299 468 303 481 8.88e-12 67.8
MS.gene026330.t1 MTR_3g057910 24.194 248 166 7 236 465 232 475 9.33e-12 67.4
MS.gene026330.t1 MTR_2g450040 22.727 242 170 7 233 459 243 482 1.11e-11 67.4
MS.gene026330.t1 MTR_7g075540 25.893 224 140 7 259 464 256 471 1.43e-11 67.0
MS.gene026330.t1 MTR_3g057900 23.056 360 234 13 122 461 129 465 1.77e-11 66.6
MS.gene026330.t1 MTR_5g016440 27.230 213 134 7 292 490 284 489 2.00e-11 66.6
MS.gene026330.t1 MTR_4g088195 21.067 375 241 12 122 465 128 478 2.41e-11 66.2
MS.gene026330.t1 MTR_4g088405 30.481 187 118 3 292 467 223 408 3.52e-11 65.5
MS.gene026330.t1 MTR_5g072980 20.968 372 261 11 112 464 116 473 3.93e-11 65.5
MS.gene026330.t1 MTR_5g072930 20.968 372 261 11 112 464 116 473 3.93e-11 65.5
MS.gene026330.t1 MTR_2g073420 23.246 228 155 6 249 464 260 479 5.52e-11 65.1
MS.gene026330.t1 MTR_8g468780 22.358 246 163 6 237 461 168 406 7.39e-11 64.7
MS.gene026330.t1 MTR_6g034965 22.453 481 324 18 7 461 10 467 8.27e-11 64.7
MS.gene026330.t1 MTR_1g055325 20.994 362 255 10 119 464 143 489 9.56e-11 64.3
MS.gene026330.t1 MTR_4g026200 23.746 299 200 9 182 464 181 467 9.80e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026330.t1 AT4G32170 42.323 508 270 7 1 489 1 504 4.31e-144 423
MS.gene026330.t1 AT4G39500 42.043 509 271 5 2 489 12 517 1.11e-142 420
MS.gene026330.t1 AT2G23180 41.779 517 267 8 1 488 1 512 1.86e-139 411
MS.gene026330.t1 AT4G39490 39.499 519 281 5 1 490 4 518 7.78e-139 410
MS.gene026330.t1 AT4G39500 43.191 470 245 4 39 489 1 467 1.69e-138 407
MS.gene026330.t1 AT1G57750 39.800 500 287 5 1 489 1 497 1.06e-135 401
MS.gene026330.t1 AT2G21910 40.787 483 263 6 28 490 29 508 5.92e-132 392
MS.gene026330.t1 AT1G47620 39.882 509 274 7 9 489 12 516 1.35e-130 389
MS.gene026330.t1 AT4G39480 41.702 470 245 4 47 490 49 515 7.45e-130 387
MS.gene026330.t1 AT4G39510 39.882 509 280 6 1 489 4 506 5.47e-128 382
MS.gene026330.t1 AT5G52320 39.490 471 266 5 32 487 35 501 1.06e-120 363
MS.gene026330.t1 AT1G65340 38.723 470 270 4 33 487 36 502 1.07e-120 363
MS.gene026330.t1 AT5G08250 37.282 515 286 9 4 490 37 542 2.88e-118 358
MS.gene026330.t1 AT5G52320 39.056 466 265 5 32 482 35 496 5.28e-118 356
MS.gene026330.t1 AT5G02900 39.223 515 252 11 1 489 1 480 6.73e-117 352
MS.gene026330.t1 AT5G08250 38.223 484 263 8 35 490 5 480 5.40e-115 348
MS.gene026330.t1 AT5G23190 36.062 513 296 8 4 490 36 542 5.68e-113 345
MS.gene026330.t1 AT1G24540 35.743 498 292 6 15 488 27 520 3.13e-108 332
MS.gene026330.t1 AT1G57750 37.383 428 254 5 1 417 1 425 1.14e-104 320
MS.gene026330.t1 AT4G00360 35.547 512 288 9 10 488 9 511 5.39e-102 317
MS.gene026330.t1 AT3G26125 33.871 496 285 7 31 490 46 534 9.63e-101 313
MS.gene026330.t1 AT1G63710 34.774 509 297 9 8 488 6 507 2.87e-98 306
MS.gene026330.t1 AT1G01600 34.442 511 297 9 10 488 9 513 5.38e-97 303
MS.gene026330.t1 AT2G45970 34.756 492 278 9 30 488 29 510 3.72e-96 301
MS.gene026330.t1 AT1G13140 31.915 517 311 8 6 490 19 526 3.18e-95 298
MS.gene026330.t1 AT1G13140 31.361 507 301 7 6 490 19 500 1.41e-91 288
MS.gene026330.t1 AT1G13150 32.377 488 297 7 30 490 38 519 2.85e-89 283
MS.gene026330.t1 AT5G58860 33.137 510 301 7 8 488 10 508 1.38e-88 280
MS.gene026330.t1 AT3G56630 34.151 489 286 12 23 488 23 498 2.33e-87 277
MS.gene026330.t1 AT1G34540 32.941 510 297 12 11 488 1 497 1.39e-86 275
MS.gene026330.t1 AT2G45510 34.127 504 288 13 3 481 17 501 5.26e-83 266
MS.gene026330.t1 AT3G48520 35.469 437 247 11 74 489 78 500 2.20e-81 261
MS.gene026330.t1 AT2G44890 33.595 509 296 12 1 481 7 501 1.87e-79 256
MS.gene026330.t1 AT5G63450 34.112 428 256 9 78 488 84 502 1.42e-77 252
MS.gene026330.t1 AT5G63450 34.112 428 256 9 78 488 142 560 7.18e-77 251
MS.gene026330.t1 AT2G44890 32.874 508 283 12 1 481 7 483 2.18e-74 243
MS.gene026330.t1 AT2G27690 33.886 422 247 9 80 485 78 483 9.10e-74 241
MS.gene026330.t1 AT3G01900 30.832 493 295 15 18 488 22 490 8.85e-69 228
MS.gene026330.t1 AT1G69500 28.996 538 319 13 1 489 1 524 4.03e-67 224
MS.gene026330.t1 AT1G31800 26.770 452 297 16 56 489 135 570 3.58e-34 136
MS.gene026330.t1 AT5G51900 30.986 284 140 9 218 489 1 240 7.01e-30 117
MS.gene026330.t1 AT3G53130 23.312 459 302 15 57 488 104 539 1.16e-27 116
MS.gene026330.t1 AT1G66030 30.769 169 101 2 1 160 1 162 5.99e-23 95.9
MS.gene026330.t1 AT3G14680 23.385 449 295 15 53 480 84 504 4.60e-22 99.8
MS.gene026330.t1 AT5G24900 22.246 463 316 14 51 486 80 525 1.06e-21 98.6
MS.gene026330.t1 AT4G15110 22.199 482 312 15 60 489 109 579 1.41e-21 98.6
MS.gene026330.t1 AT5G24900 22.877 424 287 13 86 486 2 408 2.96e-21 96.3
MS.gene026330.t1 AT3G14650 22.727 440 301 14 57 480 88 504 3.17e-21 97.1
MS.gene026330.t1 AT2G26710 24.781 456 302 14 43 483 81 510 4.35e-21 96.7
MS.gene026330.t1 AT3G25180 23.896 498 309 16 11 467 15 483 4.83e-21 96.7
MS.gene026330.t1 AT3G14640 22.907 454 293 15 53 480 106 528 1.79e-20 94.7
MS.gene026330.t1 AT3G14640 22.907 454 293 15 53 480 84 506 1.81e-20 94.7
MS.gene026330.t1 AT5G24910 24.279 416 259 18 104 488 142 532 1.20e-19 92.4
MS.gene026330.t1 AT5G52400 23.991 446 296 14 53 481 93 512 1.31e-19 92.0
MS.gene026330.t1 AT4G27710 24.169 451 290 15 57 483 90 512 3.39e-19 90.9
MS.gene026330.t1 AT3G48270 22.368 456 289 15 30 457 34 452 4.11e-19 90.5
MS.gene026330.t1 AT2G24180 26.727 333 211 12 168 481 173 491 5.66e-19 90.1
MS.gene026330.t1 AT3G14630 22.973 444 295 14 57 480 84 500 2.88e-18 87.8
MS.gene026330.t1 AT3G14630 22.921 445 294 14 57 480 139 555 4.30e-18 87.8
MS.gene026330.t1 AT3G48300 21.822 472 325 16 30 483 32 477 7.25e-18 86.7
MS.gene026330.t1 AT3G48300 21.822 472 325 16 30 483 34 479 7.30e-18 86.7
MS.gene026330.t1 AT4G13310 23.380 432 280 13 30 436 35 440 7.38e-18 86.7
MS.gene026330.t1 AT3G14690 22.788 452 296 17 59 487 90 511 7.91e-18 86.7
MS.gene026330.t1 AT3G14690 22.676 441 291 16 70 487 133 546 8.68e-18 86.7
MS.gene026330.t1 AT1G64950 28.629 248 154 7 263 488 261 507 8.83e-18 86.3
MS.gene026330.t1 AT1G64940 27.935 247 156 7 263 488 263 508 9.43e-18 86.3
MS.gene026330.t1 AT3G14660 22.819 447 292 16 57 480 88 504 1.10e-17 86.3
MS.gene026330.t1 AT3G61040 29.091 220 140 6 263 470 256 471 1.15e-17 85.9
MS.gene026330.t1 AT5G07990 22.521 484 327 18 10 464 9 473 2.20e-17 85.1
MS.gene026330.t1 AT5G38450 21.465 396 269 9 108 483 138 511 2.34e-17 85.1
MS.gene026330.t1 AT4G31950 24.901 253 171 5 233 467 231 482 3.69e-17 84.7
MS.gene026330.t1 AT5G06900 24.016 254 168 5 223 461 222 465 8.56e-17 83.6
MS.gene026330.t1 AT4G31940 25.000 248 168 4 237 467 248 494 3.27e-16 81.6
MS.gene026330.t1 AT3G20140 25.449 334 215 11 168 482 180 498 5.38e-16 80.9
MS.gene026330.t1 AT3G14610 22.148 447 296 16 57 480 87 504 5.46e-16 80.9
MS.gene026330.t1 AT4G13290 27.632 228 137 7 221 436 222 433 5.89e-16 80.9
MS.gene026330.t1 AT4G13770 21.443 485 342 12 2 464 3 470 6.56e-16 80.5
MS.gene026330.t1 AT1G13100 21.900 379 252 15 95 449 97 455 7.98e-16 80.5
MS.gene026330.t1 AT4G31970 25.600 250 164 7 237 467 247 493 2.57e-15 79.0
MS.gene026330.t1 AT5G25120 22.133 497 327 18 1 467 1 467 2.75e-15 78.6
MS.gene026330.t1 AT3G48280 20.998 481 318 18 10 463 13 458 4.91e-15 77.8
MS.gene026330.t1 AT3G20940 26.230 244 145 8 247 467 254 485 6.46e-15 77.4
MS.gene026330.t1 AT2G25160 28.571 266 165 9 187 436 202 458 7.13e-15 77.4
MS.gene026330.t1 AT2G12190 27.600 250 156 8 263 488 261 509 7.51e-15 77.4
MS.gene026330.t1 AT5G47990 23.699 346 221 12 168 488 180 507 9.44e-15 77.0
MS.gene026330.t1 AT4G39950 24.896 241 166 5 237 464 307 545 9.63e-15 77.0
MS.gene026330.t1 AT4G39950 24.793 242 167 5 237 465 267 506 1.03e-14 77.0
MS.gene026330.t1 AT2G30770 25.306 245 156 6 237 464 233 467 1.36e-14 76.6
MS.gene026330.t1 AT1G01190 27.027 222 140 7 286 488 318 536 1.94e-14 76.3
MS.gene026330.t1 AT1G01190 27.027 222 140 7 286 488 313 531 2.01e-14 76.3
MS.gene026330.t1 AT5G24950 21.133 459 300 15 30 458 35 461 2.95e-14 75.5
MS.gene026330.t1 AT2G22330 24.268 239 166 5 237 462 269 505 3.86e-14 75.1
MS.gene026330.t1 AT5G05260 25.000 376 233 13 122 464 136 495 4.02e-14 75.1
MS.gene026330.t1 AT5G25180 21.368 468 300 16 30 464 32 464 4.44e-14 74.7
MS.gene026330.t1 AT2G22330 24.268 239 166 5 237 462 292 528 4.76e-14 75.1
MS.gene026330.t1 AT3G14660 23.952 334 211 11 167 480 48 358 5.31e-14 73.9
MS.gene026330.t1 AT5G35715 23.370 368 244 12 102 449 45 394 2.17e-13 72.4
MS.gene026330.t1 AT3G14620 22.556 399 258 13 106 480 136 507 2.57e-13 72.4
MS.gene026330.t1 AT1G74110 21.713 502 319 20 30 488 66 536 2.57e-13 72.8
MS.gene026330.t1 AT1G33720 24.593 492 305 22 10 464 16 478 3.35e-13 72.0
MS.gene026330.t1 AT2G46960 23.011 465 288 18 53 483 84 512 5.15e-13 71.6
MS.gene026330.t1 AT1G67110 22.051 390 265 12 109 483 140 505 5.55e-13 71.6
MS.gene026330.t1 AT3G20100 22.559 297 197 8 168 444 179 462 5.61e-13 71.6
MS.gene026330.t1 AT3G61880 23.361 244 164 7 262 488 292 529 6.35e-13 71.2
MS.gene026330.t1 AT3G61880 24.171 211 140 6 262 458 292 496 6.39e-13 71.2
MS.gene026330.t1 AT5G04330 23.887 247 167 5 237 464 231 475 6.86e-13 71.2
MS.gene026330.t1 AT1G33720 26.239 343 209 15 146 464 24 346 7.42e-13 70.5
MS.gene026330.t1 AT1G33720 26.239 343 209 15 146 464 24 346 7.42e-13 70.5
MS.gene026330.t1 AT1G33720 26.239 343 209 15 146 464 24 346 7.42e-13 70.5
MS.gene026330.t1 AT4G37330 24.194 372 209 14 85 436 113 431 7.68e-13 70.9
MS.gene026330.t1 AT4G31500 21.038 366 250 8 125 464 117 469 8.92e-13 70.9
MS.gene026330.t1 AT4G37340 28.767 219 124 8 233 436 233 434 1.23e-12 70.5
MS.gene026330.t1 AT3G26290 24.259 371 234 13 122 467 123 471 2.72e-12 69.3
MS.gene026330.t1 AT3G26290 24.638 345 222 11 144 467 157 484 2.72e-12 69.3
MS.gene026330.t1 AT4G20240 25.243 309 191 12 122 410 125 413 3.07e-12 68.9
MS.gene026330.t1 AT2G46660 23.913 230 157 6 275 488 301 528 3.63e-12 68.9
MS.gene026330.t1 AT1G64900 26.506 249 160 6 263 489 258 505 4.47e-12 68.6
MS.gene026330.t1 AT5G42580 25.097 259 161 8 247 482 239 487 6.22e-12 68.2
MS.gene026330.t1 AT3G20110 22.045 313 205 8 168 461 177 469 6.25e-12 68.2
MS.gene026330.t1 AT2G45550 24.179 335 226 10 146 464 156 478 7.14e-12 68.2
MS.gene026330.t1 AT5G42590 22.016 486 324 16 6 464 10 467 7.71e-12 67.8
MS.gene026330.t1 AT5G10610 24.797 246 162 9 232 464 229 464 9.02e-12 67.8
MS.gene026330.t1 AT2G46960 25.074 339 202 14 169 483 86 396 1.04e-11 67.0
MS.gene026330.t1 AT4G15380 24.681 235 148 7 270 483 273 499 1.10e-11 67.4
MS.gene026330.t1 AT5G09970 25.600 250 153 10 263 487 293 534 1.19e-11 67.4
MS.gene026330.t1 AT4G36220 26.203 187 120 5 293 464 303 486 1.39e-11 67.0
MS.gene026330.t1 AT2G45570 25.066 379 232 13 119 464 120 479 1.54e-11 67.0
MS.gene026330.t1 AT3G20130 23.643 258 167 7 253 488 231 480 1.61e-11 67.0
MS.gene026330.t1 AT5G25140 22.222 378 237 12 119 467 118 467 1.61e-11 67.0
MS.gene026330.t1 AT3G20130 24.031 258 166 7 253 488 259 508 1.63e-11 67.0
MS.gene026330.t1 AT2G30750 25.806 217 142 5 264 464 254 467 2.28e-11 66.2
MS.gene026330.t1 AT2G23190 25.478 314 194 13 140 436 188 478 2.66e-11 66.2
MS.gene026330.t1 AT2G23220 27.404 208 129 6 239 436 254 449 3.21e-11 65.9
MS.gene026330.t1 AT1G33720 28.649 185 112 6 294 464 193 371 6.67e-11 64.7
MS.gene026330.t1 AT4G37400 22.785 316 222 7 163 467 162 466 7.74e-11 64.7
MS.gene026330.t1 AT1G50520 22.619 420 265 16 90 488 130 510 8.62e-11 64.7
MS.gene026330.t1 AT3G20935 25.263 190 114 6 293 461 123 305 8.90e-11 63.9

Find 101 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTATTGGCAAATTAAT+TGG 0.164337 1.2:-19980467 None:intergenic
CCAATTAATTTGCCAATAAT+TGG 0.178939 1.2:+19980467 MS.gene026330:CDS
CTTAATGATGTATCTGAAAT+AGG 0.218560 1.2:+19980848 MS.gene026330:CDS
CACATCGCGAGCAAGAATTT+TGG 0.239888 1.2:+19980638 MS.gene026330:CDS
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.2:+19981551 MS.gene026330:CDS
GAGTACAGTAACCTTGTATT+TGG 0.262632 1.2:-19981517 None:intergenic
AAAGAAAGCTTTGGGATTAC+AGG 0.287527 1.2:-19981772 None:intergenic
GCACTTGCTTTGCTCTTGTT+TGG 0.288326 1.2:-19981155 None:intergenic
CTTAACTCATTAAACTTGTT+TGG 0.288910 1.2:-19980959 None:intergenic
CCCGGTAGCATACCAATTAT+TGG 0.291433 1.2:-19980479 None:intergenic
TCTTCCTATACATTTACTAT+TGG 0.293852 1.2:+19980420 MS.gene026330:CDS
GGTTGTATGATCATGGAAAT+TGG 0.300292 1.2:-19980519 None:intergenic
ACCACCTTTATGTGAAATTT+CGG 0.304852 1.2:-19981739 None:intergenic
TCCTCCAATACACTGAATTA+TGG 0.306529 1.2:-19980381 None:intergenic
TCCTTACGCATACAACTTCT+AGG 0.313753 1.2:-19981673 None:intergenic
AACTTGTTTGGAAGGCAATT+AGG 0.324390 1.2:-19980947 None:intergenic
GTTACCGAAATTTCACATAA+AGG 0.334159 1.2:+19981735 MS.gene026330:CDS
TTCACAAACACAAGCTTTAT+CGG 0.335557 1.2:+19980590 MS.gene026330:CDS
AGCATCTGCACGATTGCATT+TGG 0.338049 1.2:+19980917 MS.gene026330:CDS
TGAAGGAAGGAGCTGGAAAC+GGG 0.346031 1.2:+19981218 MS.gene026330:CDS
TAAATTCTAATTCCCATGTA+TGG 0.351742 1.2:+19980720 MS.gene026330:CDS
TTCGCTGCTGTTTCCATACA+TGG 0.360259 1.2:-19980733 None:intergenic
TGGTCAAGAAAGGAAGTTAA+AGG 0.362304 1.2:+19981084 MS.gene026330:CDS
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.2:+19981038 MS.gene026330:CDS
TGAAGAACAAAAGAAAGCTT+TGG 0.378414 1.2:-19981781 None:intergenic
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.2:+19981552 MS.gene026330:CDS
ATTATCACCTCATCTATAAC+AGG 0.399453 1.2:-19981007 None:intergenic
AAGTTCATAGCTTTCAATAC+AGG 0.400273 1.2:+19981649 MS.gene026330:CDS
GAAGAACAAAAGAAAGCTTT+GGG 0.402585 1.2:-19981780 None:intergenic
ACTGTACTCTTTGTATGCTA+TGG 0.408529 1.2:+19981531 MS.gene026330:CDS
AGTAAATGTATAGGAAGATT+AGG 0.412657 1.2:-19980415 None:intergenic
GCCAATAATTGGTATGCTAC+CGG 0.424744 1.2:+19980478 MS.gene026330:CDS
GGAGGAACATTTCGATTTGA+AGG 0.425306 1.2:+19980560 MS.gene026330:CDS
GTGCAGCAGCAGTGAAGAAA+TGG 0.426826 1.2:+19981174 MS.gene026330:CDS
TAGATGAGGTGATAATTTAC+CGG 0.429693 1.2:+19981014 MS.gene026330:CDS
TCAGATACATCATTAAGAAA+TGG 0.437927 1.2:-19980842 None:intergenic
ATGAAGGAAGGAGCTGGAAA+CGG 0.439031 1.2:+19981217 MS.gene026330:CDS
TCACATGAAACATGGCTTGA+AGG 0.439698 1.2:+19981801 MS.gene026330:CDS
AAAATAAGGTTGTATGATCA+TGG 0.439829 1.2:-19980526 None:intergenic
TGGACTAACACGCTCTCCAC+TGG 0.440100 1.2:-19981497 None:intergenic
CCAATAATTGGTATGCTACC+GGG 0.449780 1.2:+19980479 MS.gene026330:CDS
TCTCTCTGATACCCATCTCT+CGG 0.461016 1.2:-19981599 None:intergenic
CATCATTAAGAAATGGTAGT+AGG 0.468567 1.2:-19980835 None:intergenic
CTGTACTCTTTGTATGCTAT+GGG 0.473624 1.2:+19981532 MS.gene026330:CDS
ATGTCCATAATTCAGTGTAT+TGG 0.475089 1.2:+19980377 MS.gene026330:CDS
CATTTCGATTTGAAGGAGCT+TGG 0.479272 1.2:+19980567 MS.gene026330:CDS
ACTCATTAAACTTGTTTGGA+AGG 0.480960 1.2:-19980955 None:intergenic
GGCTCAACGTTGGTCAAGAA+AGG 0.490371 1.2:+19981074 MS.gene026330:CDS
AATAGGTGCTCAGGTGGACC+TGG 0.491109 1.2:+19980865 MS.gene026330:CDS
TAGCTTCATTCAAATGAAGA+TGG 0.491117 1.2:+19981699 MS.gene026330:CDS
CAATTAGTTCAGCTCTCAGT+TGG 0.493356 1.2:+19981302 MS.gene026330:CDS
GGAATTTAAGCCCGAGAGAT+GGG 0.500530 1.2:+19981588 MS.gene026330:CDS
TCCATAATTCAGTGTATTGG+AGG 0.503198 1.2:+19980380 MS.gene026330:CDS
ATTGCACAGATATGCTCAAA+AGG 0.511230 1.2:-19981457 None:intergenic
ATCAACATTCATCGGATCAC+TGG 0.513726 1.2:-19980615 None:intergenic
GTCTCCAATAGTAAATGTAT+AGG 0.514329 1.2:-19980424 None:intergenic
TCCTAGAAGTTGTATGCGTA+AGG 0.520344 1.2:+19981672 MS.gene026330:CDS
ACCTACTCACGGCATCCTCC+AGG 0.521594 1.2:-19980883 None:intergenic
CTCTCTGATACCCATCTCTC+GGG 0.525215 1.2:-19981598 None:intergenic
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.2:+19981336 MS.gene026330:CDS
TGGAATTTAAGCCCGAGAGA+TGG 0.534787 1.2:+19981587 MS.gene026330:CDS
CAGATATGCTCAAAAGGTAC+AGG 0.535905 1.2:-19981451 None:intergenic
GAAATTTCACATAAAGGTGG+TGG 0.536525 1.2:+19981741 MS.gene026330:CDS
GCACTCATGAAGGAAGGAGC+TGG 0.544188 1.2:+19981211 MS.gene026330:CDS
TTTGTATGCTATGGGAAGGA+TGG 0.548102 1.2:+19981540 MS.gene026330:CDS
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.2:-19981033 None:intergenic
AAAGCTATGAACTTGTAAGA+TGG 0.556387 1.2:-19981640 None:intergenic
GACAGGTGACGCAAAAGCCC+CGG 0.558091 1.2:-19980497 None:intergenic
TGTATCTGAAATAGGTGCTC+AGG 0.559444 1.2:+19980856 MS.gene026330:CDS
TCGCTGCTGTTTCCATACAT+GGG 0.560548 1.2:-19980732 None:intergenic
TATGATCATGGAAATTGGAC+AGG 0.567855 1.2:-19980514 None:intergenic
ATCTCTTCCTGTTATAGATG+AGG 0.572397 1.2:+19981000 MS.gene026330:CDS
CTTTGTAAAAGCACTCATGA+AGG 0.576080 1.2:+19981201 MS.gene026330:CDS
ATCTGAAATAGGTGCTCAGG+TGG 0.576147 1.2:+19980859 MS.gene026330:CDS
TGGCTTCACATAGAGCTCCA+TGG 0.581799 1.2:-19981414 None:intergenic
AATGTATAGGAAGATTAGGA+TGG 0.582788 1.2:-19980411 None:intergenic
TTTGTTCTTCACATGAAACA+TGG 0.588468 1.2:+19981793 MS.gene026330:CDS
GTAAAAGCACTCATGAAGGA+AGG 0.588505 1.2:+19981205 MS.gene026330:CDS
AAGAAAGCTTTGGGATTACA+GGG 0.590168 1.2:-19981771 None:intergenic
GCGATGTGATCAACATTCAT+CGG 0.603130 1.2:-19980623 None:intergenic
GATAAGCTAGTGTACCTCCA+TGG 0.604777 1.2:+19981397 MS.gene026330:CDS
GAGAGATGGGTATCAGAGAG+AGG 0.605657 1.2:+19981601 MS.gene026330:CDS
TTTCACATAAAGGTGGTGGA+AGG 0.605673 1.2:+19981745 MS.gene026330:CDS
GGACTAACACGCTCTCCACT+GGG 0.606430 1.2:-19981496 None:intergenic
CAATAATTGGTATGCTACCG+GGG 0.609852 1.2:+19980480 MS.gene026330:CDS
GAAGGAAGGAGCTGGAAACG+GGG 0.618485 1.2:+19981219 MS.gene026330:CDS
AATATGGGGAGAAGACTGCA+TGG 0.631048 1.2:+19981567 MS.gene026330:CDS
AAGGAAGGAGCTGGAAACGG+GGG 0.631233 1.2:+19981220 MS.gene026330:CDS
ACCGAAATTTCACATAAAGG+TGG 0.633013 1.2:+19981738 MS.gene026330:CDS
ACCTGGAGGATGCCGTGAGT+AGG 0.633637 1.2:+19980882 MS.gene026330:CDS
GGAAGGATGGAACAAATATG+GGG 0.639334 1.2:+19981553 MS.gene026330:CDS
ATCAAAAGTGAACCTACTCA+CGG 0.642197 1.2:-19980894 None:intergenic
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.2:-19981448 None:intergenic
TACAGGAGGATAAAGCCTCA+TGG 0.642609 1.2:-19981434 None:intergenic
AGGTGCTCAGGTGGACCTGG+AGG 0.643711 1.2:+19980868 MS.gene026330:CDS
AGCGTGTTAGTCCAAATACA+AGG 0.645393 1.2:+19981506 MS.gene026330:CDS
GAGCTCTATGTGAAGCCATG+AGG 0.674811 1.2:+19981419 MS.gene026330:CDS
ACTCTTTGTATGCTATGGGA+AGG 0.698064 1.2:+19981536 MS.gene026330:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.2:-19981046 None:intergenic
AAATTCGATATACTACCCAG+TGG 0.736209 1.2:+19981481 MS.gene026330:CDS
CTTCACATAGAGCTCCATGG+AGG 0.762445 1.2:-19981411 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGAAATTTTTGATTTTTT+TGG + chr1.2:19980686-19980705 MS.gene026330:CDS 10.0%
!!! TTTTATTTCTTGAATAATTT+TGG - chr1.2:19981365-19981384 None:intergenic 10.0%
!!! ATCAAAAATTTCTTTGAAGT+TGG - chr1.2:19980681-19980700 None:intergenic 20.0%
!!! ATTTTTGATTTTTTTGGAGA+TGG + chr1.2:19980692-19980711 MS.gene026330:CDS 20.0%
! AAAATAAGGTTGTATGATCA+TGG - chr1.2:19980529-19980548 None:intergenic 25.0%
! ACAAAGTATGAAGAAAAAGT+TGG + chr1.2:19980805-19980824 MS.gene026330:CDS 25.0%
! AGTAAATGTATAGGAAGATT+AGG - chr1.2:19980418-19980437 None:intergenic 25.0%
! CCAATTATTGGCAAATTAAT+TGG - chr1.2:19980470-19980489 None:intergenic 25.0%
! TAAATTCTAATTCCCATGTA+TGG + chr1.2:19980720-19980739 MS.gene026330:CDS 25.0%
! TCAGATACATCATTAAGAAA+TGG - chr1.2:19980845-19980864 None:intergenic 25.0%
! TCCATGATGTTTCAAAAATA+AGG - chr1.2:19980543-19980562 None:intergenic 25.0%
! TCTTCCTATACATTTACTAT+TGG + chr1.2:19980420-19980439 MS.gene026330:CDS 25.0%
!! CTTAACTCATTAAACTTGTT+TGG - chr1.2:19980962-19980981 None:intergenic 25.0%
!! CTTAATGATGTATCTGAAAT+AGG + chr1.2:19980848-19980867 MS.gene026330:CDS 25.0%
!!! ACCTTATTTTTGAAACATCA+TGG + chr1.2:19980539-19980558 MS.gene026330:CDS 25.0%
!!! ACTTTTTCTTCATACTTTGT+TGG - chr1.2:19980805-19980824 None:intergenic 25.0%
!!! CCAATTAATTTGCCAATAAT+TGG + chr1.2:19980467-19980486 MS.gene026330:CDS 25.0%
!!! GAAACTGTCAAGATTTTTTT+CGG - chr1.2:19981113-19981132 None:intergenic 25.0%
!!! TTATTTTTGAAACATCATGG+AGG + chr1.2:19980542-19980561 MS.gene026330:CDS 25.0%
AAAGCTATGAACTTGTAAGA+TGG - chr1.2:19981643-19981662 None:intergenic 30.0%
AAGTTCATAGCTTTCAATAC+AGG + chr1.2:19981649-19981668 MS.gene026330:CDS 30.0%
AATGTATAGGAAGATTAGGA+TGG - chr1.2:19980414-19980433 None:intergenic 30.0%
ACCACCTTTATGTGAAATTT+CGG - chr1.2:19981742-19981761 None:intergenic 30.0%
ATGTCCATAATTCAGTGTAT+TGG + chr1.2:19980377-19980396 MS.gene026330:CDS 30.0%
ATTATCACCTCATCTATAAC+AGG - chr1.2:19981010-19981029 None:intergenic 30.0%
CATCATTAAGAAATGGTAGT+AGG - chr1.2:19980838-19980857 None:intergenic 30.0%
GAAGAACAAAAGAAAGCTTT+GGG - chr1.2:19981783-19981802 None:intergenic 30.0%
GTCTCCAATAGTAAATGTAT+AGG - chr1.2:19980427-19980446 None:intergenic 30.0%
GTTACCGAAATTTCACATAA+AGG + chr1.2:19981735-19981754 MS.gene026330:CDS 30.0%
TAGATGAGGTGATAATTTAC+CGG + chr1.2:19981014-19981033 MS.gene026330:CDS 30.0%
TAGCTTCATTCAAATGAAGA+TGG + chr1.2:19981699-19981718 MS.gene026330:CDS 30.0%
TGAAGAACAAAAGAAAGCTT+TGG - chr1.2:19981784-19981803 None:intergenic 30.0%
TTGTTGGAAAAAGTTCTTGA+AGG - chr1.2:19980789-19980808 None:intergenic 30.0%
TTTGTTCTTCACATGAAACA+TGG + chr1.2:19981793-19981812 MS.gene026330:CDS 30.0%
! ACTCATTAAACTTGTTTGGA+AGG - chr1.2:19980958-19980977 None:intergenic 30.0%
! TTCACAAACACAAGCTTTAT+CGG + chr1.2:19980590-19980609 MS.gene026330:CDS 30.0%
!!! ATAATTTTGGCTTCCACAAT+AGG - chr1.2:19981352-19981371 None:intergenic 30.0%
AAATTCGATATACTACCCAG+TGG + chr1.2:19981481-19981500 MS.gene026330:CDS 35.0%
ACCGAAATTTCACATAAAGG+TGG + chr1.2:19981738-19981757 MS.gene026330:CDS 35.0%
ACTGTACTCTTTGTATGCTA+TGG + chr1.2:19981531-19981550 MS.gene026330:CDS 35.0%
ATCAAAAGTGAACCTACTCA+CGG - chr1.2:19980897-19980916 None:intergenic 35.0%
ATCTCTTCCTGTTATAGATG+AGG + chr1.2:19981000-19981019 MS.gene026330:CDS 35.0%
ATTGCACAGATATGCTCAAA+AGG - chr1.2:19981460-19981479 None:intergenic 35.0%
CTGTACTCTTTGTATGCTAT+GGG + chr1.2:19981532-19981551 MS.gene026330:CDS 35.0%
GAAATTTCACATAAAGGTGG+TGG + chr1.2:19981741-19981760 MS.gene026330:CDS 35.0%
GAGTACAGTAACCTTGTATT+TGG - chr1.2:19981520-19981539 None:intergenic 35.0%
GGTTGTATGATCATGGAAAT+TGG - chr1.2:19980522-19980541 None:intergenic 35.0%
TATGATCATGGAAATTGGAC+AGG - chr1.2:19980517-19980536 None:intergenic 35.0%
TCCATAATTCAGTGTATTGG+AGG + chr1.2:19980380-19980399 MS.gene026330:CDS 35.0%
TCCTCCAATACACTGAATTA+TGG - chr1.2:19980384-19980403 None:intergenic 35.0%
TGGTCAAGAAAGGAAGTTAA+AGG + chr1.2:19981084-19981103 MS.gene026330:CDS 35.0%
TGTTTCAACTCATCCTATTG+TGG + chr1.2:19981336-19981355 MS.gene026330:CDS 35.0%
! AACTTGTTTGGAAGGCAATT+AGG - chr1.2:19980950-19980969 None:intergenic 35.0%
!! AAAGAAAGCTTTGGGATTAC+AGG - chr1.2:19981775-19981794 None:intergenic 35.0%
!! AAGAAAGCTTTGGGATTACA+GGG - chr1.2:19981774-19981793 None:intergenic 35.0%
!! AATTTTGGCAACTACAGAAG+GGG + chr1.2:19980653-19980672 MS.gene026330:CDS 35.0%
!! AGAATTTTGGCAACTACAGA+AGG + chr1.2:19980651-19980670 MS.gene026330:CDS 35.0%
!! CTTTGTAAAAGCACTCATGA+AGG + chr1.2:19981201-19981220 MS.gene026330:CDS 35.0%
!! GAATTTTGGCAACTACAGAA+GGG + chr1.2:19980652-19980671 MS.gene026330:CDS 35.0%
!! TCTCTCTTTTTAGCAGGAAA+TGG + chr1.2:19981277-19981296 MS.gene026330:CDS 35.0%
ACTCTTTGTATGCTATGGGA+AGG + chr1.2:19981536-19981555 MS.gene026330:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG + chr1.2:19981038-19981057 MS.gene026330:CDS 40.0%
AGCGTGTTAGTCCAAATACA+AGG + chr1.2:19981506-19981525 MS.gene026330:CDS 40.0%
ATCAACATTCATCGGATCAC+TGG - chr1.2:19980618-19980637 None:intergenic 40.0%
CAATAATTGGTATGCTACCG+GGG + chr1.2:19980480-19980499 MS.gene026330:CDS 40.0%
CAATTAGTTCAGCTCTCAGT+TGG + chr1.2:19981302-19981321 MS.gene026330:CDS 40.0%
CCAATAATTGGTATGCTACC+GGG + chr1.2:19980479-19980498 MS.gene026330:CDS 40.0%
GCCAATAATTGGTATGCTAC+CGG + chr1.2:19980478-19980497 MS.gene026330:CDS 40.0%
GCGATGTGATCAACATTCAT+CGG - chr1.2:19980626-19980645 None:intergenic 40.0%
GGAAGGATGGAACAAATATG+GGG + chr1.2:19981553-19981572 MS.gene026330:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG + chr1.2:19981552-19981571 MS.gene026330:CDS 40.0%
GTCTATGGAAGCTGCAAAAA+TGG + chr1.2:19981053-19981072 MS.gene026330:CDS 40.0%
TCACATGAAACATGGCTTGA+AGG + chr1.2:19981801-19981820 MS.gene026330:CDS 40.0%
TCCTAGAAGTTGTATGCGTA+AGG + chr1.2:19981672-19981691 MS.gene026330:CDS 40.0%
TCCTTACGCATACAACTTCT+AGG - chr1.2:19981676-19981695 None:intergenic 40.0%
TGGGAAGGATGGAACAAATA+TGG + chr1.2:19981551-19981570 MS.gene026330:CDS 40.0%
TTTGTATGCTATGGGAAGGA+TGG + chr1.2:19981540-19981559 MS.gene026330:CDS 40.0%
! ATATGCTCAAAAGGTACAGG+AGG - chr1.2:19981451-19981470 None:intergenic 40.0%
! CAGATATGCTCAAAAGGTAC+AGG - chr1.2:19981454-19981473 None:intergenic 40.0%
! CATTTCGATTTGAAGGAGCT+TGG + chr1.2:19980567-19980586 MS.gene026330:CDS 40.0%
! GGAGGAACATTTCGATTTGA+AGG + chr1.2:19980560-19980579 MS.gene026330:CDS 40.0%
! TGTATCTGAAATAGGTGCTC+AGG + chr1.2:19980856-19980875 MS.gene026330:CDS 40.0%
!! ATTTTGGCAACTACAGAAGG+GGG + chr1.2:19980654-19980673 MS.gene026330:CDS 40.0%
!! GTAAAAGCACTCATGAAGGA+AGG + chr1.2:19981205-19981224 MS.gene026330:CDS 40.0%
!! GTACTCTCTCTCTTTTTAGC+AGG + chr1.2:19981271-19981290 MS.gene026330:CDS 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG + chr1.2:19981745-19981764 MS.gene026330:CDS 40.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.2:19981567-19981586 MS.gene026330:CDS 45.0%
AGCATCTGCACGATTGCATT+TGG + chr1.2:19980917-19980936 MS.gene026330:CDS 45.0%
ATGAAGGAAGGAGCTGGAAA+CGG + chr1.2:19981217-19981236 MS.gene026330:CDS 45.0%
CCCGGTAGCATACCAATTAT+TGG - chr1.2:19980482-19980501 None:intergenic 45.0%
CTGCAAAAATGGCTCAACGT+TGG + chr1.2:19981064-19981083 MS.gene026330:CDS 45.0%
GATAAGCTAGTGTACCTCCA+TGG + chr1.2:19981397-19981416 MS.gene026330:CDS 45.0%
GCACTTGCTTTGCTCTTGTT+TGG - chr1.2:19981158-19981177 None:intergenic 45.0%
GGAATTTAAGCCCGAGAGAT+GGG + chr1.2:19981588-19981607 MS.gene026330:CDS 45.0%
TACAGGAGGATAAAGCCTCA+TGG - chr1.2:19981437-19981456 None:intergenic 45.0%
TCTCTCTGATACCCATCTCT+CGG - chr1.2:19981602-19981621 None:intergenic 45.0%
TGGAATTTAAGCCCGAGAGA+TGG + chr1.2:19981587-19981606 MS.gene026330:CDS 45.0%
! ATCTGAAATAGGTGCTCAGG+TGG + chr1.2:19980859-19980878 MS.gene026330:CDS 45.0%
! CACATCGCGAGCAAGAATTT+TGG + chr1.2:19980638-19980657 MS.gene026330:CDS 45.0%
!! TCGCTGCTGTTTCCATACAT+GGG - chr1.2:19980735-19980754 None:intergenic 45.0%
!! TTCGCTGCTGTTTCCATACA+TGG - chr1.2:19980736-19980755 None:intergenic 45.0%
!!! CAGCTCTCAGTTGGTTTTTC+TGG + chr1.2:19981311-19981330 MS.gene026330:CDS 45.0%
CTCTCTGATACCCATCTCTC+GGG - chr1.2:19981601-19981620 None:intergenic 50.0%
CTTCACATAGAGCTCCATGG+AGG - chr1.2:19981414-19981433 None:intergenic 50.0%
GACAACGTGGTATGAAGTGC+CGG - chr1.2:19981036-19981055 None:intergenic 50.0%
GAGAGATGGGTATCAGAGAG+AGG + chr1.2:19981601-19981620 MS.gene026330:CDS 50.0%
GAGCTCTATGTGAAGCCATG+AGG + chr1.2:19981419-19981438 MS.gene026330:CDS 50.0%
GGCTCAACGTTGGTCAAGAA+AGG + chr1.2:19981074-19981093 MS.gene026330:CDS 50.0%
GTGCAGCAGCAGTGAAGAAA+TGG + chr1.2:19981174-19981193 MS.gene026330:CDS 50.0%
TGAAGGAAGGAGCTGGAAAC+GGG + chr1.2:19981218-19981237 MS.gene026330:CDS 50.0%
TGCAGCTTCCATAGACAACG+TGG - chr1.2:19981049-19981068 None:intergenic 50.0%
TGGCTTCACATAGAGCTCCA+TGG - chr1.2:19981417-19981436 None:intergenic 50.0%
AAGGAAGGAGCTGGAAACGG+GGG + chr1.2:19981220-19981239 MS.gene026330:CDS 55.0%
AATAGGTGCTCAGGTGGACC+TGG + chr1.2:19980865-19980884 MS.gene026330:CDS 55.0%
GAAGGAAGGAGCTGGAAACG+GGG + chr1.2:19981219-19981238 MS.gene026330:CDS 55.0%
GCACTCATGAAGGAAGGAGC+TGG + chr1.2:19981211-19981230 MS.gene026330:CDS 55.0%
GGACTAACACGCTCTCCACT+GGG - chr1.2:19981499-19981518 None:intergenic 55.0%
TGGACTAACACGCTCTCCAC+TGG - chr1.2:19981500-19981519 None:intergenic 55.0%
ACCTACTCACGGCATCCTCC+AGG - chr1.2:19980886-19980905 None:intergenic 60.0%
ACCTGGAGGATGCCGTGAGT+AGG + chr1.2:19980882-19980901 MS.gene026330:CDS 60.0%
AGGAGCTGGAAACGGGGGAA+TGG + chr1.2:19981225-19981244 MS.gene026330:CDS 60.0%
GACAGGTGACGCAAAAGCCC+CGG - chr1.2:19980500-19980519 None:intergenic 60.0%
AGGTGCTCAGGTGGACCTGG+AGG + chr1.2:19980868-19980887 MS.gene026330:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 19980377 19981849 19980377 ID=MS.gene026330
chr1.2 mRNA 19980377 19981849 19980377 ID=MS.gene026330.t1;Parent=MS.gene026330
chr1.2 exon 19980377 19981849 19980377 ID=MS.gene026330.t1.exon1;Parent=MS.gene026330.t1
chr1.2 CDS 19980377 19981849 19980377 ID=cds.MS.gene026330.t1;Parent=MS.gene026330.t1
Gene Sequence

>MS.gene026330

ATGTCCATAATTCAGTGTATTGGAGGATTTCTAGCCATCCTAATCTTCCTATACATTTACTATTGGAGACGCAATAGAGATGAATTTGCACCAATTAATTTGCCAATAATTGGTATGCTACCGGGGCTTTTGCGTCACCTGTCCAATTTCCATGATCATACAACCTTATTTTTGAAACATCATGGAGGAACATTTCGATTTGAAGGAGCTTGGTTCACAAACACAAGCTTTATCGGTACCAGTGATCCGATGAATGTTGATCACATCGCGAGCAAGAATTTTGGCAACTACAGAAGGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAATTCCCATGTATGGAAACAGCAGCGAACAATGTTTCATTCATTTCTCAAAAAGAAAACCTTCAAGAACTTTTTCCAACAAAGTATGAAGAAAAAGTTGGAGAACTGCCTACTACCATTTCTTAATGATGTATCTGAAATAGGTGCTCAGGTGGACCTGGAGGATGCCGTGAGTAGGTTCACTTTTGATAGCATCTGCACGATTGCATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGTTAAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCAACGTTGGTCAAGAAAGGAAGTTAAAGGAAGCCGAAAAAAATCTTGACAGTTTCTTGTATGAAAGTTTAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATGACTTTGTAAAAGCACTCATGAAGGAAGGAGCTGGAAACGGGGGAATGGACGAGAAGTATCTTAGAGACAATGTACTCTCTCTCTTTTTAGCAGGAAATGGCACAATTAGTTCAGCTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATTATTCAAGAAATAAAAGATGTAGATCTTGATAAGCTAGTGTACCTCCATGGAGCTCTATGTGAAGCCATGAGGCTTTATCCTCCTGTACCTTTTGAGCATATCTGTGCAATCAAATTCGATATACTACCCAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTACTGTACTCTTTGTATGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCCGAGAGATGGGTATCAGAGAGAGGAAACACTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGTCCTAGAAGTTGTATGCGTAAGGATATTAGCTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACCGAAATTTCACATAAAGGTGGTGGAAGGTCACCCTGTAATCCCAAAGCTTTCTTTTGTTCTTCACATGAAACATGGCTTGAAGGTTAAAGTCACTAAAAGATGCATTTGA
Protein sequence

>MS.gene026330.t1

MSIIQCIGGFLAILIFLYIYYWRRNRDEFAPINLPIIGMLPGLLRHLSNFHDHTTLFLKHHGGTFRFEGAWFTNTSFIGTSDPMNVDHIASKNFGNYRRGSNFKEIFDFFGDGILNSNSHVWKQQRTMFHSFLKKKTFKNFFQQSMKKKLENCLLPFLNDVSEIGAQVDLEDAVSRFTFDSICTIAFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFIPRCLWKLQKWLNVGQERKLKEAEKNLDSFLYESLTFSKQEQSKCSSSEEMDDFVKALMKEGAGNGGMDEKYLRDNVLSLFLAGNGTISSALSWFFWLVSTHPIVEAKIIQEIKDVDLDKLVYLHGALCEAMRLYPPVPFEHICAIKFDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPERWVSERGNTIHVPSYKFIAFNTGPRSCMRKDISFIQMKMVAAALLPKFHIKVVEGHPVIPKLSFVLHMKHGLKVKVTKRCI