AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026307


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026307.t1 MTR_1g035750 94.872 507 26 0 1 507 1 507 0.0 1010
MS.gene026307.t1 MTR_1g036130 63.209 511 181 4 1 507 1 508 0.0 682
MS.gene026307.t1 MTR_1g035670 64.961 508 173 3 1 507 1 504 0.0 682
MS.gene026307.t1 MTR_1g035790 62.157 510 184 5 1 507 1 504 0.0 659
MS.gene026307.t1 MTR_1g050362 62.475 509 184 6 3 506 1 507 0.0 655
MS.gene026307.t1 MTR_1g035760 62.598 508 162 4 1 507 1 481 0.0 653
MS.gene026307.t1 MTR_1g036200 61.886 509 182 6 3 507 1 501 0.0 646
MS.gene026307.t1 MTR_1g035580 61.719 512 177 7 1 507 1 498 0.0 644
MS.gene026307.t1 MTR_1g036010 59.216 510 204 4 1 507 1 509 0.0 637
MS.gene026307.t1 MTR_1g035830 60.000 510 200 4 1 507 1 509 0.0 635
MS.gene026307.t1 MTR_1g035940 59.020 510 205 4 1 507 1 509 0.0 624
MS.gene026307.t1 MTR_1g036270 60.000 515 196 9 1 507 1 513 0.0 622
MS.gene026307.t1 MTR_1g035800 60.819 513 192 6 1 505 1 512 0.0 618
MS.gene026307.t1 MTR_1g035860 61.959 439 162 3 10 447 16 450 0.0 568
MS.gene026307.t1 MTR_1g069715 63.235 408 146 4 83 487 1 407 0.0 548
MS.gene026307.t1 MTR_7g033580 52.652 509 226 3 1 507 1 496 0.0 532
MS.gene026307.t1 MTR_7g033570 50.888 507 238 4 1 507 1 496 0.0 528
MS.gene026307.t1 MTR_8g088470 52.200 500 223 4 9 505 5 491 0.0 526
MS.gene026307.t1 MTR_6g004600 48.627 510 246 6 9 507 13 517 4.54e-173 498
MS.gene026307.t1 MTR_6g004630 49.023 512 247 6 3 507 1 505 1.58e-171 493
MS.gene026307.t1 MTR_6g004590 48.039 510 249 5 9 507 13 517 2.92e-170 491
MS.gene026307.t1 MTR_6g004670 48.221 506 249 6 4 505 9 505 1.25e-164 476
MS.gene026307.t1 MTR_6g004610 49.467 469 228 5 38 504 1 462 1.85e-157 456
MS.gene026307.t1 MTR_1g037560 39.516 496 286 6 20 506 54 544 1.82e-126 380
MS.gene026307.t1 MTR_4g075110 37.769 511 303 7 4 505 45 549 1.31e-123 373
MS.gene026307.t1 MTR_1g037550 38.845 502 285 6 20 506 54 548 5.85e-121 366
MS.gene026307.t1 MTR_8g098435 35.946 523 293 11 1 505 7 505 2.46e-98 306
MS.gene026307.t1 MTR_8g030590 35.048 525 300 13 1 505 7 510 1.34e-95 300
MS.gene026307.t1 MTR_3g463060 37.959 490 259 13 34 505 40 502 2.45e-94 296
MS.gene026307.t1 MTR_4g012320 60.731 219 86 0 289 507 7 225 2.66e-94 286
MS.gene026307.t1 MTR_5g070010 35.174 489 287 9 33 505 34 508 8.19e-93 292
MS.gene026307.t1 MTR_7g088330 34.449 508 300 11 13 505 19 508 1.17e-86 276
MS.gene026307.t1 MTR_7g096340 32.520 492 297 13 27 506 35 503 2.38e-80 259
MS.gene026307.t1 MTR_1g070345 32.860 493 298 14 25 506 35 505 6.00e-80 258
MS.gene026307.t1 MTR_7g029275 32.544 507 310 14 13 505 20 508 9.45e-80 258
MS.gene026307.t1 MTR_3g080580 34.211 494 289 16 31 505 41 517 3.36e-78 254
MS.gene026307.t1 MTR_1g070365 32.114 492 301 12 25 505 35 504 1.58e-76 249
MS.gene026307.t1 MTR_7g096320 33.784 444 261 12 74 506 83 504 3.55e-76 248
MS.gene026307.t1 MTR_8g035810 31.774 513 318 17 7 505 16 510 7.81e-74 242
MS.gene026307.t1 MTR_4g054920 34.163 442 258 12 79 505 93 516 2.29e-73 241
MS.gene026307.t1 MTR_4g119660 30.058 519 325 10 13 506 11 516 1.22e-72 239
MS.gene026307.t1 MTR_5g019140 29.865 519 326 10 13 506 26 531 5.17e-72 238
MS.gene026307.t1 MTR_2g086040 34.339 431 257 12 79 505 90 498 1.39e-71 236
MS.gene026307.t1 MTR_1g060550 33.333 441 263 12 76 505 92 512 2.73e-71 236
MS.gene026307.t1 MTR_8g035860 31.068 515 318 16 7 505 16 509 6.79e-71 234
MS.gene026307.t1 MTR_8g035820 32.033 487 297 14 34 505 42 509 8.31e-70 232
MS.gene026307.t1 MTR_8g035780 32.438 484 301 13 34 506 43 511 7.02e-68 227
MS.gene026307.t1 MTR_1g102220 29.375 480 315 10 34 505 43 506 1.23e-67 226
MS.gene026307.t1 MTR_7g406990 35.655 359 214 7 30 380 47 396 3.81e-67 223
MS.gene026307.t1 MTR_8g035760 30.063 479 312 12 34 505 49 511 1.06e-65 221
MS.gene026307.t1 MTR_8g035680 29.072 485 310 14 34 505 49 512 2.97e-63 214
MS.gene026307.t1 MTR_6g084040 55.135 185 64 2 1 184 1 167 8.91e-62 200
MS.gene026307.t1 MTR_8g035810 30.769 455 284 16 7 448 16 452 2.40e-59 203
MS.gene026307.t1 MTR_8g035680 30.749 374 231 10 144 505 8 365 1.73e-51 179
MS.gene026307.t1 MTR_1g102210 31.142 289 164 6 223 505 102 361 4.80e-40 148
MS.gene026307.t1 MTR_8g035810 28.756 386 245 15 7 379 16 384 3.35e-39 147
MS.gene026307.t1 MTR_1g070370 33.077 260 148 7 168 423 5 242 7.96e-37 136
MS.gene026307.t1 MTR_1g040110 55.357 112 49 1 125 236 57 167 1.34e-35 130
MS.gene026307.t1 MTR_1g050590 57.143 119 48 1 250 368 3 118 1.74e-35 129
MS.gene026307.t1 MTR_7g079440 27.505 469 290 17 52 505 215 648 4.85e-35 139
MS.gene026307.t1 MTR_1g062190 23.904 456 319 12 57 505 105 539 1.29e-29 122
MS.gene026307.t1 MTR_5g009110 23.938 518 327 18 36 506 74 571 7.12e-27 114
MS.gene026307.t1 MTR_7g079440 28.052 385 239 14 52 428 215 569 4.25e-26 112
MS.gene026307.t1 MTR_1g036140 54.639 97 41 1 252 348 69 162 1.22e-24 100
MS.gene026307.t1 MTR_1g036140 63.235 68 24 1 1 67 1 68 4.62e-23 96.3
MS.gene026307.t1 MTR_3g093530 23.124 493 331 14 32 504 59 523 4.00e-24 105
MS.gene026307.t1 MTR_7g006900 24.372 398 261 13 110 500 103 467 1.59e-23 103
MS.gene026307.t1 MTR_6g017325 23.155 393 272 9 110 500 138 502 3.47e-22 100
MS.gene026307.t1 MTR_2g010250 28.676 272 186 6 239 505 237 505 1.13e-21 98.6
MS.gene026307.t1 MTR_8g035790 48.485 99 49 2 409 506 1 98 1.62e-21 89.7
MS.gene026307.t1 MTR_5g009110 24.091 440 275 15 109 506 1 423 1.68e-21 97.4
MS.gene026307.t1 MTR_8g098565 27.473 273 189 5 239 505 237 506 3.49e-21 97.1
MS.gene026307.t1 MTR_2g010380 24.490 441 310 12 76 505 81 509 5.99e-20 93.2
MS.gene026307.t1 MTR_8g046580 40.909 110 64 1 384 493 197 305 7.81e-20 90.5
MS.gene026307.t1 MTR_2g010290 29.864 221 148 5 290 505 314 532 1.15e-19 92.4
MS.gene026307.t1 MTR_6g008500 22.266 512 327 20 9 476 17 501 1.22e-19 92.4
MS.gene026307.t1 MTR_1g085680 24.561 456 276 15 70 500 99 511 1.23e-19 92.4
MS.gene026307.t1 MTR_0171s0020 25.281 356 237 13 128 474 137 472 1.55e-19 92.0
MS.gene026307.t1 MTR_2g010280 29.864 221 148 5 290 505 285 503 1.57e-19 92.0
MS.gene026307.t1 MTR_2g010320 26.990 289 200 7 222 505 221 503 2.06e-19 91.7
MS.gene026307.t1 MTR_4g071710 25.369 339 218 9 160 481 164 484 3.73e-19 90.9
MS.gene026307.t1 MTR_4g088420 32.812 192 123 4 294 484 20 206 3.89e-19 87.0
MS.gene026307.t1 MTR_1g015860 27.698 278 170 7 241 506 271 529 4.64e-19 90.5
MS.gene026307.t1 MTR_0147s0030 22.521 484 309 15 46 504 88 530 7.78e-19 89.7
MS.gene026307.t1 MTR_1g101050 25.379 264 187 6 241 502 253 508 1.44e-18 89.0
MS.gene026307.t1 MTR_7g012860 24.688 320 215 10 168 481 172 471 1.50e-18 89.0
MS.gene026307.t1 MTR_0287s0060 24.688 320 215 10 168 481 172 471 1.50e-18 89.0
MS.gene026307.t1 MTR_0025s0110 25.090 279 187 7 231 502 260 523 1.87e-18 88.6
MS.gene026307.t1 MTR_2g010330 28.085 235 162 5 276 505 275 507 2.16e-18 88.6
MS.gene026307.t1 MTR_5g009110 24.734 376 247 12 36 393 74 431 2.23e-18 88.2
MS.gene026307.t1 MTR_6g008430 27.068 266 181 9 232 494 245 500 2.39e-18 88.2
MS.gene026307.t1 MTR_6g072490 25.000 264 188 6 241 502 255 510 2.53e-18 88.2
MS.gene026307.t1 MTR_1g101040 25.758 264 186 6 241 502 257 512 3.07e-18 87.8
MS.gene026307.t1 MTR_6g008530 26.829 246 167 6 237 476 257 495 5.68e-18 87.0
MS.gene026307.t1 MTR_8g008530 26.154 260 166 7 258 504 272 518 6.18e-18 87.0
MS.gene026307.t1 MTR_0181s0030 22.689 476 334 17 10 474 14 466 6.76e-18 87.0
MS.gene026307.t1 MTR_6g008620 28.261 230 147 9 232 453 249 468 7.60e-18 86.7
MS.gene026307.t1 MTR_4g113650 23.144 458 302 13 58 500 92 514 7.85e-18 86.7
MS.gene026307.t1 MTR_4g088400 28.235 255 171 7 232 484 250 494 8.18e-18 86.7
MS.gene026307.t1 MTR_2g062670 30.964 197 102 6 151 338 52 223 9.48e-18 86.3
MS.gene026307.t1 MTR_3g014880 23.077 507 338 14 9 484 15 500 1.76e-17 85.5
MS.gene026307.t1 MTR_3g104560 28.777 278 167 8 241 506 144 402 1.97e-17 84.7
MS.gene026307.t1 MTR_6g008650 24.848 330 221 11 167 484 185 499 3.58e-17 84.7
MS.gene026307.t1 MTR_7g012330 23.620 326 209 11 168 481 173 470 3.78e-17 84.3
MS.gene026307.t1 MTR_3g104560 23.452 533 343 17 14 506 30 537 4.85e-17 84.3
MS.gene026307.t1 MTR_2g010300 27.602 221 141 5 290 506 285 490 4.86e-17 84.0
MS.gene026307.t1 MTR_8g027040 27.897 233 157 7 279 505 318 545 6.41e-17 84.0
MS.gene026307.t1 MTR_6g008640 24.242 330 225 10 165 484 183 497 8.52e-17 83.6
MS.gene026307.t1 MTR_8g012585 27.237 257 157 7 230 484 198 426 9.38e-17 83.2
MS.gene026307.t1 MTR_8g042000 23.799 458 271 20 70 497 107 516 1.04e-16 83.2
MS.gene026307.t1 MTR_2g072270 21.525 446 295 16 70 497 107 515 1.10e-16 83.2
MS.gene026307.t1 MTR_4g088425 27.734 256 172 7 232 484 233 478 2.90e-16 81.6
MS.gene026307.t1 MTR_4g088405 32.821 195 125 4 291 484 219 408 4.42e-16 80.9
MS.gene026307.t1 MTR_1g091003 24.848 495 307 22 1 474 9 459 5.00e-16 80.9
MS.gene026307.t1 MTR_7g055793 26.070 257 167 6 258 504 225 468 7.17e-16 80.5
MS.gene026307.t1 MTR_8g042060 25.641 273 174 9 243 500 225 483 7.95e-16 80.5
MS.gene026307.t1 MTR_2g023680 22.026 454 298 16 70 504 101 517 8.01e-16 80.5
MS.gene026307.t1 MTR_7g055793 26.070 257 167 6 258 504 280 523 9.00e-16 80.5
MS.gene026307.t1 MTR_8g042060 25.641 273 174 9 243 500 261 519 1.08e-15 80.1
MS.gene026307.t1 MTR_2g072400 22.126 461 290 15 70 504 98 515 1.09e-15 80.1
MS.gene026307.t1 MTR_7g079440 26.531 294 187 8 52 338 215 486 1.13e-15 79.7
MS.gene026307.t1 MTR_8g104030 26.423 246 164 7 237 474 8 244 1.17e-15 77.8
MS.gene026307.t1 MTR_4g104610 21.486 498 332 19 3 474 1 465 1.46e-15 79.7
MS.gene026307.t1 MTR_4g031820 23.820 445 287 15 70 497 111 520 1.47e-15 79.7
MS.gene026307.t1 MTR_5g034900 28.922 204 138 5 306 505 317 517 1.55e-15 79.7
MS.gene026307.t1 MTR_8g042020 27.645 293 165 13 234 504 255 522 2.07e-15 79.3
MS.gene026307.t1 MTR_2g062680 32.692 156 72 5 277 431 14 137 2.23e-15 75.1
MS.gene026307.t1 MTR_5g070920 22.635 296 213 7 211 500 205 490 4.06e-15 78.2
MS.gene026307.t1 MTR_7g075610 25.050 503 306 23 9 481 13 474 5.16e-15 77.8
MS.gene026307.t1 MTR_2g450040 22.319 457 325 16 32 476 44 482 6.85e-15 77.4
MS.gene026307.t1 MTR_6g042610 23.675 283 207 8 207 484 215 493 1.13e-14 77.0
MS.gene026307.t1 MTR_8g076290 26.778 239 149 8 232 455 223 450 1.34e-14 76.6
MS.gene026307.t1 MTR_8g104100 28.177 181 120 5 298 474 55 229 1.35e-14 74.3
MS.gene026307.t1 MTR_7g098550 23.163 449 299 14 60 500 90 500 1.65e-14 76.3
MS.gene026307.t1 MTR_7g103450 25.524 286 192 9 222 504 239 506 1.84e-14 76.3
MS.gene026307.t1 MTR_7g098550 23.163 449 291 14 60 500 90 492 2.79e-14 75.5
MS.gene026307.t1 MTR_1g069200 23.923 209 152 4 294 502 308 509 2.84e-14 75.5
MS.gene026307.t1 MTR_5g021390 24.046 262 167 8 237 481 238 484 2.96e-14 75.5
MS.gene026307.t1 MTR_6g022450 25.402 311 219 9 200 505 207 509 4.30e-14 75.1
MS.gene026307.t1 MTR_6g004570 40.909 110 53 4 245 343 4 112 8.22e-14 71.6
MS.gene026307.t1 MTR_5g070710 22.692 520 328 21 9 500 15 488 8.48e-14 73.9
MS.gene026307.t1 MTR_1g035660 34.884 129 63 5 161 287 22 131 9.42e-14 68.9
MS.gene026307.t1 MTR_2g055430 30.348 201 127 7 307 504 327 517 1.15e-13 73.6
MS.gene026307.t1 MTR_2g072340 21.281 484 303 16 50 504 81 515 1.18e-13 73.6
MS.gene026307.t1 MTR_5g070690 24.390 287 191 9 212 486 204 476 1.37e-13 73.6
MS.gene026307.t1 MTR_5g070800 24.390 287 191 9 212 486 204 476 1.37e-13 73.6
MS.gene026307.t1 MTR_5g094550 25.850 294 192 8 222 505 223 500 1.66e-13 73.2
MS.gene026307.t1 MTR_6g084770 21.475 461 324 16 29 481 46 476 1.86e-13 73.2
MS.gene026307.t1 MTR_2g065360 21.467 368 253 11 121 478 99 440 1.90e-13 72.8
MS.gene026307.t1 MTR_4g031820 34.228 149 84 5 355 497 358 498 2.44e-13 72.8
MS.gene026307.t1 MTR_2g061750 28.272 191 110 6 75 247 13 194 3.85e-13 68.9
MS.gene026307.t1 MTR_5g009110 25.168 298 195 9 109 393 1 283 4.01e-13 70.9
MS.gene026307.t1 MTR_2g061740 28.272 191 110 6 75 247 13 194 4.48e-13 68.6
MS.gene026307.t1 MTR_5g070850 22.703 370 244 14 121 474 129 472 4.62e-13 71.6
MS.gene026307.t1 MTR_4g104570 29.801 151 100 4 305 455 1 145 4.99e-13 68.6
MS.gene026307.t1 MTR_0059s0170 25.856 263 168 9 232 481 225 473 7.49e-13 71.2
MS.gene026307.t1 MTR_5g095260 23.925 372 239 14 121 481 134 472 7.62e-13 71.2
MS.gene026307.t1 MTR_5g018500 26.543 162 112 5 317 476 4 160 8.27e-13 67.8
MS.gene026307.t1 MTR_5g070830 28.324 173 111 5 303 471 412 575 9.30e-13 71.2
MS.gene026307.t1 MTR_2g437840 29.148 223 137 9 239 460 241 443 1.04e-12 70.5
MS.gene026307.t1 MTR_4g095050 25.369 339 213 15 165 488 171 484 1.09e-12 70.5
MS.gene026307.t1 MTR_2g072380 25.000 252 168 5 265 504 108 350 1.12e-12 69.7
MS.gene026307.t1 MTR_4g104540 30.065 153 101 4 303 455 230 376 1.19e-12 70.1
MS.gene026307.t1 MTR_2g055470 28.358 201 131 6 307 504 327 517 1.29e-12 70.5
MS.gene026307.t1 MTR_2g072380 24.535 269 174 5 238 504 249 490 1.38e-12 70.1
MS.gene026307.t1 MTR_2g061200 24.034 233 158 5 282 504 305 528 1.39e-12 70.5
MS.gene026307.t1 MTR_6g084900 26.316 209 143 5 303 505 65 268 2.36e-12 67.8
MS.gene026307.t1 MTR_2g072420 30.935 139 88 3 369 504 7 140 3.15e-12 64.7
MS.gene026307.t1 MTR_4g104660 22.246 463 315 16 29 480 55 483 3.23e-12 69.3
MS.gene026307.t1 MTR_5g016440 22.738 431 275 15 84 507 110 489 3.26e-12 68.9
MS.gene026307.t1 MTR_5g091760 26.415 212 142 6 245 455 230 428 3.40e-12 68.9
MS.gene026307.t1 MTR_1g035140 25.969 258 172 8 232 481 225 471 3.97e-12 68.9
MS.gene026307.t1 MTR_4g104550 21.199 467 316 19 31 481 33 463 3.99e-12 68.9
MS.gene026307.t1 MTR_5g007460 22.281 377 260 13 107 474 88 440 4.05e-12 68.6
MS.gene026307.t1 MTR_7g075580 25.301 249 170 8 264 502 257 499 4.21e-12 68.9
MS.gene026307.t1 MTR_4g077210 26.222 225 153 7 232 455 235 447 5.41e-12 68.6
MS.gene026307.t1 MTR_5g094520 26.710 307 187 10 211 498 237 524 7.36e-12 68.2
MS.gene026307.t1 MTR_3g058000 25.461 271 182 9 221 481 216 476 8.39e-12 67.8
MS.gene026307.t1 MTR_3g436390 24.911 281 195 8 233 507 231 501 8.95e-12 67.8
MS.gene026307.t1 MTR_6g035115 23.056 373 245 12 119 481 128 468 9.29e-12 67.8
MS.gene026307.t1 MTR_0638s0020 22.590 332 224 10 156 478 90 397 9.64e-12 67.4
MS.gene026307.t1 MTR_4g104640 20.222 361 264 11 119 474 140 481 9.80e-12 67.8
MS.gene026307.t1 MTR_5g094520 26.710 307 187 10 211 498 132 419 9.83e-12 67.4
MS.gene026307.t1 MTR_2g072310 23.420 269 177 5 238 504 109 350 1.05e-11 66.6
MS.gene026307.t1 MTR_8g466180 23.134 268 192 6 221 481 212 472 1.38e-11 67.0
MS.gene026307.t1 MTR_5g070700 23.826 298 206 10 212 500 206 491 1.47e-11 67.0
MS.gene026307.t1 MTR_3g467200 25.385 260 174 9 237 484 260 511 1.67e-11 67.0
MS.gene026307.t1 MTR_4g089055 22.973 370 249 13 121 481 144 486 1.72e-11 67.0
MS.gene026307.t1 MTR_1g107295 22.652 181 134 4 294 474 304 478 2.30e-11 66.6
MS.gene026307.t1 MTR_1g097220 21.790 257 188 9 258 507 280 530 3.88e-11 65.9
MS.gene026307.t1 MTR_5g019010 22.951 244 174 6 237 474 232 467 4.83e-11 65.5
MS.gene026307.t1 MTR_2g073480 23.056 373 233 12 119 481 56 384 5.24e-11 65.1
MS.gene026307.t1 MTR_2g072260 27.451 204 127 5 308 504 321 510 5.69e-11 65.1
MS.gene026307.t1 MTR_5g016410 21.978 546 317 25 9 501 7 496 6.26e-11 65.1
MS.gene026307.t1 MTR_6g084090 61.538 39 15 0 286 324 12 50 7.70e-11 57.8
MS.gene026307.t1 MTR_4g088195 20.378 476 318 15 31 482 40 478 8.21e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026307.t1 AT2G23180 41.667 516 286 4 1 505 1 512 8.34e-144 423
MS.gene026307.t1 AT4G39490 42.176 524 280 6 1 507 1 518 5.79e-139 411
MS.gene026307.t1 AT4G39480 42.941 510 274 4 9 507 12 515 2.51e-136 404
MS.gene026307.t1 AT4G39500 42.188 512 279 7 4 506 14 517 8.19e-135 400
MS.gene026307.t1 AT1G47620 42.181 486 258 6 32 506 43 516 1.98e-133 397
MS.gene026307.t1 AT4G32170 41.683 511 286 5 1 506 1 504 3.40e-133 395
MS.gene026307.t1 AT1G57750 38.911 514 286 5 4 506 1 497 7.91e-130 387
MS.gene026307.t1 AT4G39500 42.105 475 261 5 38 506 1 467 2.40e-127 379
MS.gene026307.t1 AT2G21910 41.079 482 271 4 32 507 34 508 2.53e-126 378
MS.gene026307.t1 AT4G39510 38.986 513 299 4 1 506 1 506 1.58e-125 376
MS.gene026307.t1 AT1G65340 39.148 493 282 4 17 504 23 502 9.57e-124 371
MS.gene026307.t1 AT5G08250 37.911 517 297 9 4 507 37 542 2.08e-123 372
MS.gene026307.t1 AT5G52320 39.918 486 277 4 23 504 27 501 2.85e-121 365
MS.gene026307.t1 AT5G23190 36.770 514 308 7 4 507 36 542 1.84e-120 365
MS.gene026307.t1 AT5G52320 39.501 481 276 4 23 499 27 496 1.42e-118 358
MS.gene026307.t1 AT5G08250 38.493 491 278 9 30 507 1 480 3.45e-118 357
MS.gene026307.t1 AT5G02900 40.000 515 265 10 1 506 1 480 6.79e-115 348
MS.gene026307.t1 AT3G26125 34.553 492 301 5 32 507 48 534 1.47e-106 328
MS.gene026307.t1 AT1G24540 36.458 480 293 6 33 505 46 520 2.37e-106 327
MS.gene026307.t1 AT1G63710 37.692 520 287 13 8 505 3 507 4.90e-106 327
MS.gene026307.t1 AT1G13150 34.969 489 293 7 33 507 42 519 1.10e-103 321
MS.gene026307.t1 AT2G45970 37.551 490 277 9 33 505 33 510 3.41e-103 320
MS.gene026307.t1 AT1G13140 34.959 492 289 8 33 507 49 526 9.59e-102 316
MS.gene026307.t1 AT4G00360 35.429 525 299 13 1 505 7 511 8.22e-100 311
MS.gene026307.t1 AT1G57750 36.508 441 252 5 4 433 1 424 8.12e-99 305
MS.gene026307.t1 AT1G13140 34.576 483 277 7 33 507 49 500 6.63e-98 305
MS.gene026307.t1 AT1G01600 35.887 496 280 11 33 505 33 513 1.60e-95 300
MS.gene026307.t1 AT5G58860 36.475 488 278 10 34 505 37 508 4.20e-95 298
MS.gene026307.t1 AT3G56630 33.126 483 297 11 32 505 33 498 2.28e-80 259
MS.gene026307.t1 AT1G34540 33.747 483 293 12 32 505 33 497 2.72e-80 259
MS.gene026307.t1 AT2G27690 34.965 429 257 9 76 502 75 483 1.56e-78 254
MS.gene026307.t1 AT2G45510 32.749 513 318 14 1 505 15 508 4.38e-75 246
MS.gene026307.t1 AT1G69500 30.597 536 328 10 3 506 1 524 9.01e-75 245
MS.gene026307.t1 AT5G63450 33.562 438 263 12 77 505 84 502 3.50e-74 243
MS.gene026307.t1 AT5G63450 33.562 438 263 12 77 505 142 560 1.59e-73 243
MS.gene026307.t1 AT2G44890 34.573 457 278 12 50 498 58 501 2.21e-73 241
MS.gene026307.t1 AT3G48520 30.709 508 321 14 10 506 13 500 1.36e-71 236
MS.gene026307.t1 AT2G44890 33.115 459 264 14 50 498 58 483 3.16e-67 224
MS.gene026307.t1 AT3G01900 31.098 492 298 15 26 505 28 490 3.36e-67 224
MS.gene026307.t1 AT1G31800 25.361 485 329 14 32 506 109 570 6.29e-36 141
MS.gene026307.t1 AT3G53130 25.054 459 310 12 57 505 105 539 1.83e-33 133
MS.gene026307.t1 AT4G15110 22.265 521 333 16 36 506 81 579 1.12e-25 111
MS.gene026307.t1 AT3G14680 26.593 455 283 19 56 497 88 504 4.41e-24 105
MS.gene026307.t1 AT5G24900 22.614 482 318 15 45 503 76 525 1.86e-22 100
MS.gene026307.t1 AT5G24900 27.599 279 175 7 237 503 145 408 2.07e-22 99.8
MS.gene026307.t1 AT5G52400 29.958 237 155 5 266 500 287 514 2.08e-22 100
MS.gene026307.t1 AT2G26710 24.167 480 312 15 38 500 66 510 6.68e-22 99.4
MS.gene026307.t1 AT3G26210 24.877 406 283 12 106 505 111 500 7.23e-22 99.0
MS.gene026307.t1 AT1G13110 22.973 370 270 9 106 474 112 467 1.41e-21 98.2
MS.gene026307.t1 AT3G14640 24.945 453 295 15 56 497 88 506 1.95e-21 97.8
MS.gene026307.t1 AT5G57260 25.532 376 249 14 119 484 120 474 2.13e-21 97.8
MS.gene026307.t1 AT3G14640 24.503 453 297 15 56 497 110 528 2.18e-21 97.8
MS.gene026307.t1 AT3G25180 23.714 447 288 13 58 484 70 483 5.20e-21 96.7
MS.gene026307.t1 AT2G24180 26.176 340 222 11 167 498 173 491 4.99e-20 93.6
MS.gene026307.t1 AT3G14690 23.269 520 325 18 17 504 69 546 1.31e-19 92.4
MS.gene026307.t1 AT3G14690 23.256 516 322 18 17 500 34 507 1.63e-19 92.0
MS.gene026307.t1 AT3G14610 24.401 459 289 18 56 497 87 504 2.09e-19 91.7
MS.gene026307.t1 AT4G31940 29.699 266 166 8 237 490 248 504 2.11e-19 91.7
MS.gene026307.t1 AT4G31950 29.412 272 170 10 233 491 231 493 2.69e-19 91.3
MS.gene026307.t1 AT5G35715 26.286 350 228 10 145 484 81 410 4.70e-19 90.1
MS.gene026307.t1 AT1G66030 30.636 173 102 4 1 162 1 166 6.48e-19 84.7
MS.gene026307.t1 AT4G13310 23.707 464 289 19 34 474 40 461 6.82e-19 90.1
MS.gene026307.t1 AT3G26830 25.000 380 267 12 98 474 97 461 7.86e-19 89.7
MS.gene026307.t1 AT5G24910 25.279 269 179 6 247 505 276 532 1.17e-18 89.4
MS.gene026307.t1 AT3G26330 24.462 372 250 15 118 481 120 468 2.80e-18 88.2
MS.gene026307.t1 AT4G13290 23.140 363 237 13 121 474 125 454 3.66e-18 87.8
MS.gene026307.t1 AT1G64940 26.772 254 171 6 261 505 261 508 4.65e-18 87.4
MS.gene026307.t1 AT2G46960 23.142 471 288 18 57 500 89 512 4.95e-18 87.4
MS.gene026307.t1 AT1G13100 22.520 373 269 11 106 474 105 461 5.05e-18 87.4
MS.gene026307.t1 AT2G45560 24.935 385 242 15 114 481 124 478 7.17e-18 87.0
MS.gene026307.t1 AT1G64950 26.378 254 175 4 260 505 258 507 9.22e-18 86.7
MS.gene026307.t1 AT2G45570 25.434 346 233 13 143 481 152 479 1.60e-17 85.9
MS.gene026307.t1 AT2G46950 22.103 466 320 12 48 500 130 565 1.75e-17 85.9
MS.gene026307.t1 AT4G27710 23.179 453 308 11 57 500 91 512 2.35e-17 85.1
MS.gene026307.t1 AT3G48300 22.124 452 271 20 31 455 34 431 2.87e-17 84.7
MS.gene026307.t1 AT3G48300 22.124 452 271 20 31 455 36 433 2.89e-17 84.7
MS.gene026307.t1 AT4G31970 28.571 266 169 8 237 490 247 503 6.14e-17 84.0
MS.gene026307.t1 AT3G14630 25.268 467 281 19 51 492 72 495 6.42e-17 84.0
MS.gene026307.t1 AT3G14630 25.427 468 279 20 51 492 127 550 1.14e-16 83.2
MS.gene026307.t1 AT3G26180 24.172 513 311 25 2 481 5 472 1.53e-16 82.8
MS.gene026307.t1 AT4G12320 21.893 507 331 18 2 482 18 485 1.89e-16 82.4
MS.gene026307.t1 AT3G26160 24.642 349 229 16 119 455 120 446 2.37e-16 82.0
MS.gene026307.t1 AT2G46960 24.859 354 219 14 158 500 79 396 2.48e-16 81.3
MS.gene026307.t1 AT3G48270 22.289 332 214 12 127 453 139 431 3.75e-16 81.3
MS.gene026307.t1 AT5G51900 34.211 152 89 3 219 359 2 153 4.72e-16 78.2
MS.gene026307.t1 AT3G03470 27.313 227 157 3 286 505 284 509 5.02e-16 81.3
MS.gene026307.t1 AT1G67110 29.714 175 112 5 327 500 341 505 7.24e-16 80.5
MS.gene026307.t1 AT5G25120 20.322 497 341 16 7 484 7 467 8.70e-16 80.5
MS.gene026307.t1 AT1G64930 27.928 222 148 6 290 505 293 508 1.51e-15 79.7
MS.gene026307.t1 AT5G06900 25.392 319 207 12 167 478 171 465 1.57e-15 79.7
MS.gene026307.t1 AT2G26170 27.869 244 162 5 270 505 201 438 1.62e-15 79.3
MS.gene026307.t1 AT2G26170 27.869 244 162 5 270 505 284 521 1.74e-15 79.3
MS.gene026307.t1 AT1G01190 26.446 242 164 8 272 505 296 531 3.72e-15 78.6
MS.gene026307.t1 AT1G01190 26.446 242 164 8 272 505 301 536 3.97e-15 78.6
MS.gene026307.t1 AT3G61880 26.180 233 148 9 249 474 280 495 7.28e-15 77.8
MS.gene026307.t1 AT3G61880 26.180 233 148 9 249 474 280 495 7.41e-15 77.4
MS.gene026307.t1 AT2G22330 24.286 280 188 9 219 481 244 516 1.00e-14 77.0
MS.gene026307.t1 AT3G26200 25.469 373 247 13 119 481 118 469 1.01e-14 77.0
MS.gene026307.t1 AT2G22330 24.286 280 188 9 219 481 267 539 1.26e-14 77.0
MS.gene026307.t1 AT3G20950 23.030 330 231 10 150 474 168 479 2.86e-14 75.9
MS.gene026307.t1 AT2G45580 24.260 338 227 11 167 494 21 339 3.09e-14 74.7
MS.gene026307.t1 AT2G12190 25.000 256 178 5 260 505 258 509 3.27e-14 75.5
MS.gene026307.t1 AT3G61040 26.728 217 142 8 263 474 256 460 3.39e-14 75.5
MS.gene026307.t1 AT2G45580 22.727 374 258 12 118 481 127 479 4.26e-14 75.1
MS.gene026307.t1 AT3G53300 23.256 473 303 17 29 481 37 469 4.96e-14 74.7
MS.gene026307.t1 AT5G38450 28.571 175 114 5 327 500 347 511 5.85e-14 74.7
MS.gene026307.t1 AT2G14100 24.857 350 229 13 167 505 181 507 6.62e-14 74.7
MS.gene026307.t1 AT5G24950 21.763 363 253 11 119 474 122 460 8.32e-14 74.3
MS.gene026307.t1 AT5G47990 23.467 375 237 15 150 505 164 507 9.52e-14 73.9
MS.gene026307.t1 AT2G30770 22.438 361 248 12 121 474 125 460 1.08e-13 73.9
MS.gene026307.t1 AT4G37330 22.727 396 245 12 84 474 113 452 1.08e-13 73.9
MS.gene026307.t1 AT5G04330 22.925 253 179 6 237 481 231 475 1.33e-13 73.6
MS.gene026307.t1 AT4G31500 24.471 331 233 11 167 494 167 483 1.78e-13 73.2
MS.gene026307.t1 AT5G25180 21.818 495 330 18 7 481 7 464 3.13e-13 72.4
MS.gene026307.t1 AT4G36220 23.723 274 185 7 222 481 223 486 3.99e-13 72.0
MS.gene026307.t1 AT2G27010 23.404 376 244 15 149 507 138 486 4.56e-13 72.0
MS.gene026307.t1 AT4G12310 22.846 267 186 8 222 482 235 487 6.76e-13 71.2
MS.gene026307.t1 AT4G37400 22.101 457 318 14 58 506 60 486 1.17e-12 70.5
MS.gene026307.t1 AT1G50560 23.919 347 237 13 167 505 184 511 1.22e-12 70.5
MS.gene026307.t1 AT3G48280 24.895 237 155 9 222 453 213 431 1.55e-12 70.1
MS.gene026307.t1 AT3G20100 23.243 370 246 15 150 505 163 508 1.95e-12 69.7
MS.gene026307.t1 AT3G48310 18.590 468 334 15 23 480 29 459 3.04e-12 69.3
MS.gene026307.t1 AT4G13770 20.882 340 251 7 145 481 146 470 3.53e-12 68.9
MS.gene026307.t1 AT4G12300 19.836 489 351 17 9 482 21 483 3.70e-12 68.9
MS.gene026307.t1 AT3G32047 24.359 312 213 11 167 474 180 472 3.75e-12 68.9
MS.gene026307.t1 AT3G26190 23.873 377 256 13 119 485 118 473 4.07e-12 68.9
MS.gene026307.t1 AT4G15360 22.652 362 244 15 109 458 119 456 4.67e-12 68.6
MS.gene026307.t1 AT1G64900 28.205 195 131 5 317 506 315 505 4.76e-12 68.6
MS.gene026307.t1 AT3G44250 25.897 390 254 14 102 481 104 468 8.38e-12 67.8
MS.gene026307.t1 AT4G20240 23.184 358 236 13 79 427 86 413 8.64e-12 67.8
MS.gene026307.t1 AT5G05260 20.842 475 328 18 26 474 36 488 9.45e-12 67.8
MS.gene026307.t1 AT3G26180 27.586 232 138 8 254 481 133 338 1.36e-11 66.6
MS.gene026307.t1 AT2G42850 25.676 222 146 7 241 459 233 438 1.38e-11 67.0
MS.gene026307.t1 AT1G66540 23.235 340 223 13 144 474 32 342 1.55e-11 66.6
MS.gene026307.t1 AT3G26310 21.833 371 261 13 118 481 119 467 1.92e-11 66.6
MS.gene026307.t1 AT3G20130 27.027 222 146 9 292 505 267 480 2.10e-11 66.6
MS.gene026307.t1 AT5G09970 22.047 254 190 5 255 504 285 534 2.13e-11 66.6
MS.gene026307.t1 AT3G20130 27.027 222 146 9 292 505 295 508 2.34e-11 66.6
MS.gene026307.t1 AT3G20960 23.397 312 210 12 156 459 66 356 2.64e-11 65.9
MS.gene026307.t1 AT5G25900 23.387 372 243 13 129 482 136 483 3.09e-11 66.2
MS.gene026307.t1 AT3G20960 23.473 311 209 12 157 459 170 459 4.52e-11 65.5
MS.gene026307.t1 AT5G67310 23.311 296 204 8 184 474 189 466 4.53e-11 65.5
MS.gene026307.t1 AT5G25130 20.926 497 340 16 7 485 7 468 6.58e-11 65.1
MS.gene026307.t1 AT4G37370 26.457 223 141 7 239 459 238 439 7.26e-11 65.1

Find 96 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACCTGCACTTTCCTATT+TGG 0.145321 1.4:+20056456 MS.gene026307:CDS
ATTCCAAGTATTGGCCAATT+TGG 0.171304 1.4:-20056009 None:intergenic
TAGTATAATATCCTTGTATT+TGG 0.200265 1.4:-20057110 None:intergenic
TTCTGTTGCGTCTCCAACTA+TGG 0.203732 1.4:-20055975 None:intergenic
CAGGTCTCAGTTGGTTCTTT+TGG 0.223831 1.4:+20056862 MS.gene026307:CDS
GTTTCTTCTCTTGACCAATT+TGG 0.239281 1.4:-20056620 None:intergenic
CATAGTGATTGGAAATATTA+TGG 0.276511 1.4:-20056047 None:intergenic
TCTTTACCCAAACAACTTCT+TGG 0.276591 1.4:-20057266 None:intergenic
TGGGAAGGATGGATAAAATA+TGG 0.277438 1.4:+20057144 MS.gene026307:CDS
CACATCGTAAGCAAGAATTT+TGG 0.320133 1.4:+20056177 MS.gene026307:CDS
TGCAGGGCCAAGAAGTTGTT+TGG 0.321225 1.4:+20057259 MS.gene026307:CDS
ATAGAAAGCCTTGGAGTTAC+AGG 0.329072 1.4:-20057365 None:intergenic
ATTATACTATTTGTATTCAA+TGG 0.332869 1.4:+20057124 MS.gene026307:CDS
TTTCATCTCTTGAATAATCT+TGG 0.333113 1.4:-20056913 None:intergenic
TTCCAAGTATTGGCCAATTT+GGG 0.342004 1.4:-20056008 None:intergenic
ATGAAAGATAATTGTCTATC+TGG 0.344650 1.4:+20056930 MS.gene026307:CDS
TGATTCCGATGAATGGAAAA+AGG 0.359177 1.4:+20056266 MS.gene026307:CDS
GAAATGCAATCATCCCAAAT+TGG 0.367942 1.4:+20055995 MS.gene026307:CDS
CACTTTCTTTGAAATGAAGA+TGG 0.370803 1.4:+20057292 MS.gene026307:CDS
TCATCGGAATCAGAATTTAA+AGG 0.384883 1.4:-20056255 None:intergenic
TGCAGCTTCCATACAAAAGT+TGG 0.389686 1.4:-20056588 None:intergenic
TGGCTGCCGCGGCTATACTA+TGG 0.392000 1.4:+20057312 MS.gene026307:CDS
ATCTCCACTCGGAAGTATAT+CGG 0.397271 1.4:-20057078 None:intergenic
ATAATCTTGGCTTCCACAAC+AGG 0.399180 1.4:-20056900 None:intergenic
ACGATGTGGTGTACATTCAT+TGG 0.404057 1.4:-20056162 None:intergenic
TAAATTCTGATTCCGATGAA+TGG 0.404261 1.4:+20056259 MS.gene026307:CDS
ATCCCAAATTGGCCAATACT+TGG 0.406326 1.4:+20056006 MS.gene026307:CDS
TCTTCTTAATTGTCCATAGT+TGG 0.406573 1.4:+20055962 MS.gene026307:CDS
CGGCTATACTATGGAAGTTT+CGG 0.414473 1.4:+20057321 MS.gene026307:CDS
AATCTATTGTTAGCAGGAAA+TGG 0.423632 1.4:+20056828 MS.gene026307:CDS
AATTTGGATCGAATCCAAAT+AGG 0.426721 1.4:-20056470 None:intergenic
CCAAGGCTTTCTATTACCCT+TGG 0.433155 1.4:+20057374 MS.gene026307:CDS
TATGGACAATTAAGAAGAAC+AGG 0.434962 1.4:-20055957 None:intergenic
GAGCTATATGTGAAGCCTTA+AGG 0.440405 1.4:+20057012 MS.gene026307:CDS
GAAGTTTCGGATACATTTAG+TGG 0.442454 1.4:+20057334 MS.gene026307:CDS
ATCAAAAGTGAACCTTGTTA+AGG 0.442728 1.4:-20056433 None:intergenic
ACAAACAATTCAGAAGAAAC+AGG 0.444384 1.4:+20056344 MS.gene026307:CDS
TAAAGCTCTTTCTATGATTG+AGG 0.448525 1.4:+20056539 MS.gene026307:CDS
TGGAATGAAACATGGCTTGA+AGG 0.454745 1.4:+20057394 MS.gene026307:CDS
CTGCAGAAGTGGCTCCAAAT+TGG 0.454751 1.4:+20056606 MS.gene026307:CDS
GGTTATATAATCATAGTGAT+TGG 0.455646 1.4:-20056058 None:intergenic
CATGATCAAGAAATGGTAGT+AGG 0.456100 1.4:-20056374 None:intergenic
TTATACTATTTGTATTCAAT+GGG 0.456853 1.4:+20057125 MS.gene026307:CDS
TCAAGCCATGTTTCATTCCA+AGG 0.467966 1.4:-20057391 None:intergenic
GCAGGGCCAAGAAGTTGTTT+GGG 0.474195 1.4:+20057260 MS.gene026307:CDS
GGGAAGGATGGATAAAATAT+GGG 0.475356 1.4:+20057145 MS.gene026307:CDS
TTGAGGAAGCAGTAGCCTAC+AGG 0.476224 1.4:+20056556 MS.gene026307:CDS
AAACTTGATTACTTCAATTG+TGG 0.477174 1.4:+20056959 MS.gene026307:CDS
ATACTGAAAGGAGCGGGAAA+AGG 0.484482 1.4:+20056768 MS.gene026307:CDS
GGCTGGTTCACGAGCACCAC+TGG 0.485140 1.4:+20056123 MS.gene026307:CDS
ATGGATGCATGATCAAGAAA+TGG 0.499853 1.4:-20056381 None:intergenic
CAGTTAGTGCAGGTCTCAGT+TGG 0.503939 1.4:+20056853 MS.gene026307:CDS
AAGTTCATAGCTTTCAATGC+AGG 0.505996 1.4:+20057242 MS.gene026307:CDS
AACAATTTCAGTCATGATCT+CGG 0.509884 1.4:+20056501 MS.gene026307:CDS
TACTGAAAGGAGCGGGAAAA+GGG 0.515947 1.4:+20056769 MS.gene026307:CDS
GCACTCAATCTATTGTTAGC+AGG 0.519470 1.4:+20056822 MS.gene026307:CDS
GACGGTAGCATTCCAAGTAT+TGG 0.519839 1.4:-20056018 None:intergenic
TTTGTATTCAATGGGAAGGA+TGG 0.524105 1.4:+20057133 MS.gene026307:CDS
ACTATTTGTATTCAATGGGA+AGG 0.527829 1.4:+20057129 MS.gene026307:CDS
AGTTCATAGCTTTCAATGCA+GGG 0.528807 1.4:+20057243 MS.gene026307:CDS
CAAGCCATGTTTCATTCCAA+GGG 0.533438 1.4:-20057390 None:intergenic
ATGTTCATGATTCAGTGCAT+TGG 0.538171 1.4:+20055919 MS.gene026307:CDS
TGTTTCATGTCATCCTGTTG+TGG 0.543232 1.4:+20056887 MS.gene026307:CDS
TTTCGGATACATTTAGTGGA+AGG 0.543334 1.4:+20057338 MS.gene026307:CDS
GACAGGAGGATAAAGCCTTA+AGG 0.545454 1.4:-20057027 None:intergenic
AAAGAGATACTGAAAGGAGC+GGG 0.546629 1.4:+20056762 MS.gene026307:CDS
ATTCAGCAGCACTAGAGAAG+TGG 0.549406 1.4:+20056716 MS.gene026307:CDS
TTGTATGGAAGCTGCAGAAG+TGG 0.557104 1.4:+20056595 MS.gene026307:CDS
TGAGGAAGCAGTAGCCTACA+GGG 0.557116 1.4:+20056557 MS.gene026307:CDS
ATTACCCTTGGAATGAAACA+TGG 0.564742 1.4:+20057386 MS.gene026307:CDS
CCAAGGGTAATAGAAAGCCT+TGG 0.572510 1.4:-20057374 None:intergenic
GAATCCAAATAGGAAAGTGC+AGG 0.575632 1.4:-20056460 None:intergenic
TGAAATGAAGATGGCTGCCG+CGG 0.575989 1.4:+20057301 MS.gene026307:CDS
TTGATAAAAGAGATACTGAA+AGG 0.579823 1.4:+20056756 MS.gene026307:CDS
GGAAATGGCACAGTTAGTGC+AGG 0.580878 1.4:+20056843 MS.gene026307:CDS
TGGAATTTAAGCCTGAGAGA+TGG 0.597446 1.4:+20057180 MS.gene026307:CDS
ATCATGTAAGTCCAAATACA+AGG 0.608745 1.4:+20057099 MS.gene026307:CDS
ACTTGCATGATGCCTTAACA+AGG 0.609106 1.4:+20056421 MS.gene026307:CDS
AAAAGAGATACTGAAAGGAG+CGG 0.610407 1.4:+20056761 MS.gene026307:CDS
AATATGGGGAGAAGACTGCA+TGG 0.624387 1.4:+20057160 MS.gene026307:CDS
AAGGTCATCCTGTAACTCCA+AGG 0.643847 1.4:+20057357 MS.gene026307:CDS
CAAAATTCTTGCTTACGATG+TGG 0.649193 1.4:-20056176 None:intergenic
GGACTTACATGATCTCCACT+CGG 0.653269 1.4:-20057089 None:intergenic
GAAATATTATGGAGAGCCGA+CGG 0.656271 1.4:-20056036 None:intergenic
AAAGCTATGAACTTGTAAGA+CGG 0.664105 1.4:-20057233 None:intergenic
AGTTGGAAAGAAGCCCCTGT+AGG 0.664765 1.4:-20056571 None:intergenic
GGAAGGATGGATAAAATATG+GGG 0.670089 1.4:+20057146 MS.gene026307:CDS
GATAAACTAGTTTACCTCCA+CGG 0.672570 1.4:+20056990 MS.gene026307:CDS
ATCCATAGTAAAAGCTCACG+TGG 0.685507 1.4:+20056398 MS.gene026307:CDS
AAACTTCCATAGTATAGCCG+CGG 0.711701 1.4:-20057318 None:intergenic
AGGCTTCACATATAGCTCCG+TGG 0.717814 1.4:-20057007 None:intergenic
AATACTTGGAATGCTACCGT+CGG 0.718723 1.4:+20056020 MS.gene026307:CDS
ATCGCTCGTAAAGATACCAG+TGG 0.722194 1.4:-20056139 None:intergenic
GAGGAAGCAGTAGCCTACAG+GGG 0.732739 1.4:+20056558 MS.gene026307:CDS
AAAGCCGATATACTTCCGAG+TGG 0.736346 1.4:+20057074 MS.gene026307:CDS
CTTCACATATAGCTCCGTGG+AGG 0.753666 1.4:-20057004 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATACTATTTGTATTCAA+TGG + chr1.4:20057124-20057143 MS.gene026307:CDS 15.0%
!! TTATACTATTTGTATTCAAT+GGG + chr1.4:20057125-20057144 MS.gene026307:CDS 15.0%
!! TAGTATAATATCCTTGTATT+TGG - chr1.4:20057113-20057132 None:intergenic 20.0%
!!! AAAGAAACTTTTGAAACTTT+TGG + chr1.4:20056225-20056244 MS.gene026307:CDS 20.0%
! AAACTTGATTACTTCAATTG+TGG + chr1.4:20056959-20056978 MS.gene026307:CDS 25.0%
! ATGAAAGATAATTGTCTATC+TGG + chr1.4:20056930-20056949 MS.gene026307:CDS 25.0%
! CATAGTGATTGGAAATATTA+TGG - chr1.4:20056050-20056069 None:intergenic 25.0%
! GGTTATATAATCATAGTGAT+TGG - chr1.4:20056061-20056080 None:intergenic 25.0%
! TTGATAAAAGAGATACTGAA+AGG + chr1.4:20056756-20056775 MS.gene026307:CDS 25.0%
! TTTCATCTCTTGAATAATCT+TGG - chr1.4:20056916-20056935 None:intergenic 25.0%
!!! AAATTGTTTTGAAGGCAATT+TGG - chr1.4:20056489-20056508 None:intergenic 25.0%
!!! AATTTTGGCAACTATGAAAA+AGG + chr1.4:20056192-20056211 MS.gene026307:CDS 25.0%
!!! ACCATGATGTTTTAAAACTA+AGG - chr1.4:20056082-20056101 None:intergenic 25.0%
!!! ACCTTAGTTTTAAAACATCA+TGG + chr1.4:20056078-20056097 MS.gene026307:CDS 25.0%
!!! ATTTTGGCAACTATGAAAAA+GGG + chr1.4:20056193-20056212 MS.gene026307:CDS 25.0%
!!! TTAGTTTTAAAACATCATGG+TGG + chr1.4:20056081-20056100 MS.gene026307:CDS 25.0%
AAAGCTATGAACTTGTAAGA+CGG - chr1.4:20057236-20057255 None:intergenic 30.0%
AACAATTTCAGTCATGATCT+CGG + chr1.4:20056501-20056520 MS.gene026307:CDS 30.0%
AATCTATTGTTAGCAGGAAA+TGG + chr1.4:20056828-20056847 MS.gene026307:CDS 30.0%
AATTTGGATCGAATCCAAAT+AGG - chr1.4:20056473-20056492 None:intergenic 30.0%
ACAAACAATTCAGAAGAAAC+AGG + chr1.4:20056344-20056363 MS.gene026307:CDS 30.0%
ACTATTTGTATTCAATGGGA+AGG + chr1.4:20057129-20057148 MS.gene026307:CDS 30.0%
ATCAAAAGTGAACCTTGTTA+AGG - chr1.4:20056436-20056455 None:intergenic 30.0%
ATCATGTAAGTCCAAATACA+AGG + chr1.4:20057099-20057118 MS.gene026307:CDS 30.0%
TAAAGCTCTTTCTATGATTG+AGG + chr1.4:20056539-20056558 MS.gene026307:CDS 30.0%
TAAATTCTGATTCCGATGAA+TGG + chr1.4:20056259-20056278 MS.gene026307:CDS 30.0%
TATGGACAATTAAGAAGAAC+AGG - chr1.4:20055960-20055979 None:intergenic 30.0%
TCATCGGAATCAGAATTTAA+AGG - chr1.4:20056258-20056277 None:intergenic 30.0%
TCTTCTTAATTGTCCATAGT+TGG + chr1.4:20055962-20055981 MS.gene026307:CDS 30.0%
! ATTGCAAACTTTTGCTCAAT+AGG - chr1.4:20057053-20057072 None:intergenic 30.0%
! TTGCAAACTTTTGCTCAATA+GGG - chr1.4:20057052-20057071 None:intergenic 30.0%
!! CACTTTCTTTGAAATGAAGA+TGG + chr1.4:20057292-20057311 MS.gene026307:CDS 30.0%
!! TGCTTCACTCATTTTTGAAA+AGG + chr1.4:20056298-20056317 MS.gene026307:CDS 30.0%
!!! CATGACTGAAATTGTTTTGA+AGG - chr1.4:20056497-20056516 None:intergenic 30.0%
AAAAGAGATACTGAAAGGAG+CGG + chr1.4:20056761-20056780 MS.gene026307:CDS 35.0%
AAGTTCATAGCTTTCAATGC+AGG + chr1.4:20057242-20057261 MS.gene026307:CDS 35.0%
AGTTCATAGCTTTCAATGCA+GGG + chr1.4:20057243-20057262 MS.gene026307:CDS 35.0%
ATGGATGCATGATCAAGAAA+TGG - chr1.4:20056384-20056403 None:intergenic 35.0%
ATGTTCATGATTCAGTGCAT+TGG + chr1.4:20055919-20055938 MS.gene026307:CDS 35.0%
ATTACCCTTGGAATGAAACA+TGG + chr1.4:20057386-20057405 MS.gene026307:CDS 35.0%
ATTACCTGCACTTTCCTATT+TGG + chr1.4:20056456-20056475 MS.gene026307:CDS 35.0%
CAAAATTCTTGCTTACGATG+TGG - chr1.4:20056179-20056198 None:intergenic 35.0%
CATGATCAAGAAATGGTAGT+AGG - chr1.4:20056377-20056396 None:intergenic 35.0%
GAAATGCAATCATCCCAAAT+TGG + chr1.4:20055995-20056014 MS.gene026307:CDS 35.0%
GAAGTTTCGGATACATTTAG+TGG + chr1.4:20057334-20057353 MS.gene026307:CDS 35.0%
GAGAGATGGATATCAAAAAG+CGG + chr1.4:20057194-20057213 MS.gene026307:CDS 35.0%
GGAAGGATGGATAAAATATG+GGG + chr1.4:20057146-20057165 MS.gene026307:CDS 35.0%
GGGAAGGATGGATAAAATAT+GGG + chr1.4:20057145-20057164 MS.gene026307:CDS 35.0%
GTTTCTTCTCTTGACCAATT+TGG - chr1.4:20056623-20056642 None:intergenic 35.0%
TCTTTACCCAAACAACTTCT+TGG - chr1.4:20057269-20057288 None:intergenic 35.0%
TGATTCCGATGAATGGAAAA+AGG + chr1.4:20056266-20056285 MS.gene026307:CDS 35.0%
TGGGAAGGATGGATAAAATA+TGG + chr1.4:20057144-20057163 MS.gene026307:CDS 35.0%
TTTCGGATACATTTAGTGGA+AGG + chr1.4:20057338-20057357 MS.gene026307:CDS 35.0%
TTTGTATTCAATGGGAAGGA+TGG + chr1.4:20057133-20057152 MS.gene026307:CDS 35.0%
! CACATCGTAAGCAAGAATTT+TGG + chr1.4:20056177-20056196 MS.gene026307:CDS 35.0%
! CTTTTTGATATCCATCTCTC+AGG - chr1.4:20057194-20057213 None:intergenic 35.0%
! GATAAACTAGTTTACCTCCA+CGG + chr1.4:20056990-20057009 MS.gene026307:CDS 35.0%
! GCTTCTTTCCAACTTTTGTA+TGG + chr1.4:20056580-20056599 MS.gene026307:CDS 35.0%
!! ATTCCAAGTATTGGCCAATT+TGG - chr1.4:20056012-20056031 None:intergenic 35.0%
!! TCTGTTTTGCTCTTCAAGTT+TGG - chr1.4:20056697-20056716 None:intergenic 35.0%
!! TTCCAAGTATTGGCCAATTT+GGG - chr1.4:20056011-20056030 None:intergenic 35.0%
!!! ACTTTTGAAACTTTTGGAGC+TGG + chr1.4:20056231-20056250 MS.gene026307:CDS 35.0%
AAACTTCCATAGTATAGCCG+CGG - chr1.4:20057321-20057340 None:intergenic 40.0%
AAAGAGATACTGAAAGGAGC+GGG + chr1.4:20056762-20056781 MS.gene026307:CDS 40.0%
AATACTTGGAATGCTACCGT+CGG + chr1.4:20056020-20056039 MS.gene026307:CDS 40.0%
ACGATGTGGTGTACATTCAT+TGG - chr1.4:20056165-20056184 None:intergenic 40.0%
ACTTGCATGATGCCTTAACA+AGG + chr1.4:20056421-20056440 MS.gene026307:CDS 40.0%
ATAATCTTGGCTTCCACAAC+AGG - chr1.4:20056903-20056922 None:intergenic 40.0%
ATAGAAAGCCTTGGAGTTAC+AGG - chr1.4:20057368-20057387 None:intergenic 40.0%
ATCCATAGTAAAAGCTCACG+TGG + chr1.4:20056398-20056417 MS.gene026307:CDS 40.0%
ATCCCAAATTGGCCAATACT+TGG + chr1.4:20056006-20056025 MS.gene026307:CDS 40.0%
CAAGCCATGTTTCATTCCAA+GGG - chr1.4:20057393-20057412 None:intergenic 40.0%
CGGCTATACTATGGAAGTTT+CGG + chr1.4:20057321-20057340 MS.gene026307:CDS 40.0%
GAAATATTATGGAGAGCCGA+CGG - chr1.4:20056039-20056058 None:intergenic 40.0%
GAGCTATATGTGAAGCCTTA+AGG + chr1.4:20057012-20057031 MS.gene026307:CDS 40.0%
GCACTCAATCTATTGTTAGC+AGG + chr1.4:20056822-20056841 MS.gene026307:CDS 40.0%
TCAAGCCATGTTTCATTCCA+AGG - chr1.4:20057394-20057413 None:intergenic 40.0%
TGCAGCTTCCATACAAAAGT+TGG - chr1.4:20056591-20056610 None:intergenic 40.0%
TGGAATGAAACATGGCTTGA+AGG + chr1.4:20057394-20057413 MS.gene026307:CDS 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.4:20057180-20057199 MS.gene026307:CDS 40.0%
TGTTTCATGTCATCCTGTTG+TGG + chr1.4:20056887-20056906 MS.gene026307:CDS 40.0%
! AACATCATGGTGGCACTTTT+AGG + chr1.4:20056091-20056110 MS.gene026307:CDS 40.0%
! AACTTTTGCTCAATAGGGAC+AGG - chr1.4:20057047-20057066 None:intergenic 40.0%
! ATCTCCACTCGGAAGTATAT+CGG - chr1.4:20057081-20057100 None:intergenic 40.0%
! CCTCTCCTTTTTCCATTCAT+CGG - chr1.4:20056274-20056293 None:intergenic 40.0%
! GAATCCAAATAGGAAAGTGC+AGG - chr1.4:20056463-20056482 None:intergenic 40.0%
AAAGCCGATATACTTCCGAG+TGG + chr1.4:20057074-20057093 MS.gene026307:CDS 45.0%
AAGGTCATCCTGTAACTCCA+AGG + chr1.4:20057357-20057376 MS.gene026307:CDS 45.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.4:20057160-20057179 MS.gene026307:CDS 45.0%
ATACTGAAAGGAGCGGGAAA+AGG + chr1.4:20056768-20056787 MS.gene026307:CDS 45.0%
ATCGCTCGTAAAGATACCAG+TGG - chr1.4:20056142-20056161 None:intergenic 45.0%
ATTCAGCAGCACTAGAGAAG+TGG + chr1.4:20056716-20056735 MS.gene026307:CDS 45.0%
CCAAGGCTTTCTATTACCCT+TGG + chr1.4:20057374-20057393 MS.gene026307:CDS 45.0%
CCAAGGGTAATAGAAAGCCT+TGG - chr1.4:20057377-20057396 None:intergenic 45.0%
CCGATGAATGGAAAAAGGAG+AGG + chr1.4:20056271-20056290 MS.gene026307:CDS 45.0%
GACAGGAGGATAAAGCCTTA+AGG - chr1.4:20057030-20057049 None:intergenic 45.0%
GACGGTAGCATTCCAAGTAT+TGG - chr1.4:20056021-20056040 None:intergenic 45.0%
GGACTTACATGATCTCCACT+CGG - chr1.4:20057092-20057111 None:intergenic 45.0%
TACTGAAAGGAGCGGGAAAA+GGG + chr1.4:20056769-20056788 MS.gene026307:CDS 45.0%
TTCTGTTGCGTCTCCAACTA+TGG - chr1.4:20055978-20055997 None:intergenic 45.0%
TTGTATGGAAGCTGCAGAAG+TGG + chr1.4:20056595-20056614 MS.gene026307:CDS 45.0%
! GTCCACGTGAGCTTTTACTA+TGG - chr1.4:20056403-20056422 None:intergenic 45.0%
! TTTTGCTCAATAGGGACAGG+AGG - chr1.4:20057044-20057063 None:intergenic 45.0%
!! CAGGTCTCAGTTGGTTCTTT+TGG + chr1.4:20056862-20056881 MS.gene026307:CDS 45.0%
!!! CTTTTAGGTTTGAAGGAGGC+TGG + chr1.4:20056106-20056125 MS.gene026307:CDS 45.0%
!!! GGCACTTTTAGGTTTGAAGG+AGG + chr1.4:20056102-20056121 MS.gene026307:CDS 45.0%
!!! GGTGGCACTTTTAGGTTTGA+AGG + chr1.4:20056099-20056118 MS.gene026307:CDS 45.0%
AGGCTTCACATATAGCTCCG+TGG - chr1.4:20057010-20057029 None:intergenic 50.0%
AGTTGGAAAGAAGCCCCTGT+AGG - chr1.4:20056574-20056593 None:intergenic 50.0%
CAGTTAGTGCAGGTCTCAGT+TGG + chr1.4:20056853-20056872 MS.gene026307:CDS 50.0%
CTGCAGAAGTGGCTCCAAAT+TGG + chr1.4:20056606-20056625 MS.gene026307:CDS 50.0%
CTTCACATATAGCTCCGTGG+AGG - chr1.4:20057007-20057026 None:intergenic 50.0%
GCAGGGCCAAGAAGTTGTTT+GGG + chr1.4:20057260-20057279 MS.gene026307:CDS 50.0%
GGAAATGGCACAGTTAGTGC+AGG + chr1.4:20056843-20056862 MS.gene026307:CDS 50.0%
TGAAATGAAGATGGCTGCCG+CGG + chr1.4:20057301-20057320 MS.gene026307:CDS 50.0%
TGAGGAAGCAGTAGCCTACA+GGG + chr1.4:20056557-20056576 MS.gene026307:CDS 50.0%
TGCAGGGCCAAGAAGTTGTT+TGG + chr1.4:20057259-20057278 MS.gene026307:CDS 50.0%
TTGAGGAAGCAGTAGCCTAC+AGG + chr1.4:20056556-20056575 MS.gene026307:CDS 50.0%
GAGGAAGCAGTAGCCTACAG+GGG + chr1.4:20056558-20056577 MS.gene026307:CDS 55.0%
TGGCTGCCGCGGCTATACTA+TGG + chr1.4:20057312-20057331 MS.gene026307:CDS 60.0%
! GGCTGGTTCACGAGCACCAC+TGG + chr1.4:20056123-20056142 MS.gene026307:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 20055919 20057442 20055919 ID=MS.gene026307
chr1.4 mRNA 20055919 20057442 20055919 ID=MS.gene026307.t1;Parent=MS.gene026307
chr1.4 exon 20055919 20057442 20055919 ID=MS.gene026307.t1.exon1;Parent=MS.gene026307.t1
chr1.4 CDS 20055919 20057442 20055919 ID=cds.MS.gene026307.t1;Parent=MS.gene026307.t1
Gene Sequence

>MS.gene026307

ATGTTCATGATTCAGTGCATTGGAGCATTTGTAGCAATCCTGTTCTTCTTAATTGTCCATAGTTGGAGACGCAACAGAAATGCAATCATCCCAAATTGGCCAATACTTGGAATGCTACCGTCGGCTCTCCATAATATTTCCAATCACTATGATTATATAACCTTAGTTTTAAAACATCATGGTGGCACTTTTAGGTTTGAAGGAGGCTGGTTCACGAGCACCACTGGTATCTTTACGAGCGATCCAATGAATGTACACCACATCGTAAGCAAGAATTTTGGCAACTATGAAAAAGGGTCTAATTTCAAAGAAACTTTTGAAACTTTTGGAGCTGGACCTTTAAATTCTGATTCCGATGAATGGAAAAAGGAGAGGACGATGCTTCACTCATTTTTGAAAAGGAAAAACTTTGAAAACTTTCTCAAACAAACAATTCAGAAGAAACAGGAGAATTTCCTACTACCATTTCTTGATCATGCATCCATAGTAAAAGCTCACGTGGACTTGCATGATGCCTTAACAAGGTTCACTTTTGATATTACCTGCACTTTCCTATTTGGATTCGATCCAAATTGCCTTCAAAACAATTTCAGTCATGATCTCGGAGATGTCACTTATCATAAAGCTCTTTCTATGATTGAGGAAGCAGTAGCCTACAGGGGCTTCTTTCCAACTTTTGTATGGAAGCTGCAGAAGTGGCTCCAAATTGGTCAAGAGAAGAAACTCAAAGTAGCTCAAGAAAGTCTTGACAAATTCTTGCATGAATGCATAATATCCAAACTTGAAGAGCAAAACAGATTCAGCAGCACTAGAGAAGTGGAAGATTCTGACTGTGACTTGATAAAAGAGATACTGAAAGGAGCGGGAAAAGGGAAAACAAGTGAGAAGTATCTTAGAGACACTGCACTCAATCTATTGTTAGCAGGAAATGGCACAGTTAGTGCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCATGTCATCCTGTTGTGGAAGCCAAGATTATTCAAGAGATGAAAGATAATTGTCTATCTGGTGATGAAAACTTGATTACTTCAATTGTGGAAAAGCTTGATAAACTAGTTTACCTCCACGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTGTCCCTATTGAGCAAAAGTTTGCAATCAAAGCCGATATACTTCCGAGTGGAGATCATGTAAGTCCAAATACAAGGATATTATACTATTTGTATTCAATGGGAAGGATGGATAAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCAAAAAGCGGACAAATTATACATGTACCGTCTTACAAGTTCATAGCTTTCAATGCAGGGCCAAGAAGTTGTTTGGGTAAAGACATCACTTTCTTTGAAATGAAGATGGCTGCCGCGGCTATACTATGGAAGTTTCGGATACATTTAGTGGAAGGTCATCCTGTAACTCCAAGGCTTTCTATTACCCTTGGAATGAAACATGGCTTGAAGGTCAAAGTCACTAAAAGATGCATTTGA

Protein sequence

>MS.gene026307.t1

MFMIQCIGAFVAILFFLIVHSWRRNRNAIIPNWPILGMLPSALHNISNHYDYITLVLKHHGGTFRFEGGWFTSTTGIFTSDPMNVHHIVSKNFGNYEKGSNFKETFETFGAGPLNSDSDEWKKERTMLHSFLKRKNFENFLKQTIQKKQENFLLPFLDHASIVKAHVDLHDALTRFTFDITCTFLFGFDPNCLQNNFSHDLGDVTYHKALSMIEEAVAYRGFFPTFVWKLQKWLQIGQEKKLKVAQESLDKFLHECIISKLEEQNRFSSTREVEDSDCDLIKEILKGAGKGKTSEKYLRDTALNLLLAGNGTVSAGLSWFFWLVSCHPVVEAKIIQEMKDNCLSGDENLITSIVEKLDKLVYLHGAICEALRLYPPVPIEQKFAIKADILPSGDHVSPNTRILYYLYSMGRMDKIWGEDCMEFKPERWISKSGQIIHVPSYKFIAFNAGPRSCLGKDITFFEMKMAAAAILWKFRIHLVEGHPVTPRLSITLGMKHGLKVKVTKRCI