AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041220.t1 MTR_7g033570 94.960 496 25 0 1 496 1 496 0.0 980
MS.gene041220.t1 MTR_7g033580 85.081 496 74 0 1 496 1 496 0.0 892
MS.gene041220.t1 MTR_8g088470 79.588 485 98 1 12 495 8 492 0.0 817
MS.gene041220.t1 MTR_1g035670 53.521 497 219 5 10 496 10 504 0.0 565
MS.gene041220.t1 MTR_6g004670 56.073 494 208 4 9 494 13 505 0.0 557
MS.gene041220.t1 MTR_1g036130 51.606 498 227 5 12 496 12 508 0.0 547
MS.gene041220.t1 MTR_6g004630 54.251 494 218 4 10 496 13 505 0.0 546
MS.gene041220.t1 MTR_6g004590 53.187 502 216 5 13 496 17 517 0.0 542
MS.gene041220.t1 MTR_1g035790 52.372 506 229 7 1 496 1 504 0.0 541
MS.gene041220.t1 MTR_6g004600 52.475 505 221 4 10 496 14 517 0.0 538
MS.gene041220.t1 MTR_1g036200 52.390 502 230 6 3 496 1 501 0.0 537
MS.gene041220.t1 MTR_1g035750 51.081 509 234 3 1 496 1 507 0.0 536
MS.gene041220.t1 MTR_1g035760 51.927 493 206 7 12 496 12 481 0.0 535
MS.gene041220.t1 MTR_1g035830 50.797 502 230 6 10 496 10 509 0.0 529
MS.gene041220.t1 MTR_1g036010 50.598 502 231 6 10 496 10 509 0.0 527
MS.gene041220.t1 MTR_1g035800 51.758 512 229 6 1 494 1 512 0.0 526
MS.gene041220.t1 MTR_6g004610 55.292 463 199 4 38 493 1 462 0.0 523
MS.gene041220.t1 MTR_1g050362 51.690 503 223 8 9 494 7 506 0.0 518
MS.gene041220.t1 MTR_1g035580 51.195 502 218 6 10 496 9 498 0.0 517
MS.gene041220.t1 MTR_1g036270 50.195 514 237 6 1 496 1 513 2.78e-178 510
MS.gene041220.t1 MTR_1g035940 48.503 501 243 5 10 496 10 509 1.95e-175 503
MS.gene041220.t1 MTR_1g069715 51.351 407 181 6 84 475 2 406 8.20e-147 436
MS.gene041220.t1 MTR_1g035860 46.804 438 221 5 9 436 15 450 9.01e-147 429
MS.gene041220.t1 MTR_1g037560 41.478 487 270 5 23 494 57 543 9.65e-135 401
MS.gene041220.t1 MTR_1g037550 39.879 494 278 5 20 494 54 547 1.09e-134 401
MS.gene041220.t1 MTR_4g075110 39.087 504 291 6 6 494 47 549 1.01e-131 393
MS.gene041220.t1 MTR_4g012320 79.556 225 46 0 272 496 1 225 2.09e-131 380
MS.gene041220.t1 MTR_8g030590 40.412 485 263 10 33 496 33 512 6.50e-118 357
MS.gene041220.t1 MTR_5g070010 39.167 480 273 7 33 496 34 510 1.91e-115 350
MS.gene041220.t1 MTR_8g098435 39.583 480 269 9 33 496 33 507 1.69e-112 342
MS.gene041220.t1 MTR_3g463060 37.238 478 274 7 33 496 39 504 4.13e-104 321
MS.gene041220.t1 MTR_1g060550 39.348 399 224 9 77 467 93 481 3.03e-86 275
MS.gene041220.t1 MTR_5g019140 33.588 524 305 12 5 495 18 531 3.99e-86 275
MS.gene041220.t1 MTR_4g119660 33.588 524 305 13 5 495 3 516 4.07e-86 274
MS.gene041220.t1 MTR_3g080580 33.534 498 299 11 19 494 30 517 5.14e-85 272
MS.gene041220.t1 MTR_7g096340 32.489 474 295 11 33 494 42 502 2.28e-82 264
MS.gene041220.t1 MTR_7g029275 32.742 507 305 10 9 494 17 508 2.91e-82 264
MS.gene041220.t1 MTR_1g070365 33.058 484 301 11 23 494 32 504 8.82e-82 263
MS.gene041220.t1 MTR_2g086040 34.906 424 257 8 74 491 85 495 1.29e-81 262
MS.gene041220.t1 MTR_1g070345 33.128 486 292 13 27 495 36 505 2.42e-81 261
MS.gene041220.t1 MTR_7g088330 34.127 504 296 15 13 494 19 508 2.57e-81 261
MS.gene041220.t1 MTR_8g035860 34.310 478 289 13 34 495 42 510 4.41e-81 261
MS.gene041220.t1 MTR_7g096320 32.347 473 297 10 33 494 43 503 1.31e-79 257
MS.gene041220.t1 MTR_4g054920 34.862 436 254 10 79 495 93 517 2.29e-79 257
MS.gene041220.t1 MTR_8g035780 34.043 470 285 11 34 487 43 503 3.22e-79 256
MS.gene041220.t1 MTR_8g035820 34.624 439 266 11 73 495 77 510 2.11e-78 254
MS.gene041220.t1 MTR_7g406990 38.462 351 204 6 30 369 47 396 7.37e-76 245
MS.gene041220.t1 MTR_8g035810 32.569 436 267 10 79 495 84 511 8.18e-76 247
MS.gene041220.t1 MTR_1g102220 31.120 482 295 12 34 495 43 507 2.37e-73 241
MS.gene041220.t1 MTR_8g035680 28.721 477 301 12 34 489 49 507 8.73e-68 226
MS.gene041220.t1 MTR_8g035760 28.330 473 307 13 34 489 49 506 1.52e-65 220
MS.gene041220.t1 MTR_8g035810 32.447 376 228 9 79 436 84 451 9.44e-63 211
MS.gene041220.t1 MTR_8g035680 28.286 350 224 7 157 489 21 360 3.49e-51 178
MS.gene041220.t1 MTR_6g084040 44.253 174 78 2 10 182 10 165 3.85e-44 153
MS.gene041220.t1 MTR_1g102210 29.630 351 199 10 155 490 40 357 5.76e-42 153
MS.gene041220.t1 MTR_8g035810 30.065 306 191 7 79 367 84 383 5.10e-39 146
MS.gene041220.t1 MTR_1g070370 33.865 251 147 6 168 412 5 242 5.85e-39 142
MS.gene041220.t1 MTR_7g079440 27.352 457 282 20 61 494 219 648 2.34e-35 140
MS.gene041220.t1 MTR_1g062190 25.346 434 296 13 75 494 120 539 1.56e-30 125
MS.gene041220.t1 MTR_5g009110 25.319 470 285 17 77 495 117 571 2.85e-30 124
MS.gene041220.t1 MTR_7g079440 28.191 376 226 16 61 417 219 569 5.83e-28 117
MS.gene041220.t1 MTR_5g009110 24.714 437 265 15 109 495 1 423 1.14e-27 115
MS.gene041220.t1 MTR_2g062670 35.602 191 116 4 148 337 49 233 3.40e-25 108
MS.gene041220.t1 MTR_2g062670 30.526 190 88 5 148 337 265 410 2.25e-17 85.1
MS.gene041220.t1 MTR_2g072270 24.190 463 267 20 63 489 104 518 3.61e-25 108
MS.gene041220.t1 MTR_1g050590 43.590 117 60 2 246 357 3 118 5.35e-25 100
MS.gene041220.t1 MTR_8g046580 48.039 102 50 2 369 469 193 292 6.78e-25 105
MS.gene041220.t1 MTR_1g101040 29.434 265 172 7 229 487 253 508 8.43e-24 104
MS.gene041220.t1 MTR_1g040110 38.583 127 75 1 109 232 41 167 1.47e-23 97.4
MS.gene041220.t1 MTR_6g072490 28.409 264 176 7 229 487 251 506 9.65e-23 101
MS.gene041220.t1 MTR_1g101050 28.030 264 177 7 229 487 249 504 1.76e-22 100
MS.gene041220.t1 MTR_3g093530 22.611 429 297 12 79 493 116 523 1.78e-22 100
MS.gene041220.t1 MTR_4g113650 22.653 490 307 13 39 496 72 521 2.04e-22 100
MS.gene041220.t1 MTR_7g006900 26.840 231 150 5 266 492 255 470 4.90e-22 99.4
MS.gene041220.t1 MTR_6g017325 24.235 392 266 13 109 492 137 505 2.87e-21 97.1
MS.gene041220.t1 MTR_8g042000 23.195 457 298 15 58 493 99 523 7.66e-21 95.9
MS.gene041220.t1 MTR_1g085680 22.687 454 297 15 61 492 93 514 7.96e-21 95.9
MS.gene041220.t1 MTR_0147s0030 23.009 452 302 14 59 493 108 530 9.25e-21 95.9
MS.gene041220.t1 MTR_2g072400 23.129 441 299 14 70 493 98 515 1.46e-20 95.1
MS.gene041220.t1 MTR_7g079440 28.322 286 168 13 61 327 219 486 2.53e-20 94.0
MS.gene041220.t1 MTR_3g014880 22.263 539 334 21 10 494 16 523 4.88e-20 93.6
MS.gene041220.t1 MTR_0025s0110 22.689 476 306 17 38 487 80 519 5.14e-20 93.6
MS.gene041220.t1 MTR_7g098550 23.356 441 299 11 61 495 91 498 7.18e-20 92.8
MS.gene041220.t1 MTR_6g008500 24.847 326 212 9 160 465 189 501 1.28e-19 92.4
MS.gene041220.t1 MTR_7g055793 22.467 454 304 14 58 493 100 523 1.41e-19 92.0
MS.gene041220.t1 MTR_7g055793 22.467 454 304 14 58 493 45 468 1.50e-19 91.7
MS.gene041220.t1 MTR_6g008620 25.000 460 274 19 25 442 38 468 1.54e-19 92.0
MS.gene041220.t1 MTR_7g098550 22.902 441 309 10 61 495 91 506 2.00e-19 91.7
MS.gene041220.t1 MTR_5g095230 22.947 475 307 19 38 493 79 513 3.25e-19 90.9
MS.gene041220.t1 MTR_2g055430 22.422 446 295 16 70 493 101 517 3.84e-19 90.5
MS.gene041220.t1 MTR_8g008530 22.410 415 256 12 108 493 141 518 4.31e-19 90.5
MS.gene041220.t1 MTR_5g009110 26.866 335 208 13 77 388 117 437 4.31e-19 90.1
MS.gene041220.t1 MTR_2g072340 22.366 465 318 16 46 493 77 515 5.09e-19 90.1
MS.gene041220.t1 MTR_8g042020 22.462 463 293 14 58 493 99 522 1.19e-18 89.4
MS.gene041220.t1 MTR_6g022450 24.633 341 230 9 163 493 175 498 1.42e-18 89.0
MS.gene041220.t1 MTR_2g010250 27.174 276 177 8 236 494 237 505 1.57e-18 88.6
MS.gene041220.t1 MTR_1g069200 21.475 461 321 15 42 487 71 505 2.06e-18 88.6
MS.gene041220.t1 MTR_6g008600 27.003 337 197 13 134 449 167 475 2.59e-18 88.2
MS.gene041220.t1 MTR_6g008650 23.031 508 323 22 10 473 16 499 2.81e-18 88.2
MS.gene041220.t1 MTR_2g023680 24.079 407 271 13 104 493 132 517 2.87e-18 87.8
MS.gene041220.t1 MTR_6g008530 27.350 234 152 7 242 465 270 495 5.00e-18 87.4
MS.gene041220.t1 MTR_2g055470 21.300 446 300 15 70 493 101 517 5.77e-18 87.0
MS.gene041220.t1 MTR_1g015860 27.203 261 178 6 241 495 275 529 8.78e-18 86.7
MS.gene041220.t1 MTR_6g042540 22.880 507 330 18 5 473 9 492 1.13e-17 86.3
MS.gene041220.t1 MTR_1g036140 42.000 100 52 2 247 341 68 166 1.88e-17 80.5
MS.gene041220.t1 MTR_1g036140 37.113 97 53 4 10 99 10 105 2.01e-12 65.9
MS.gene041220.t1 MTR_6g042610 23.256 473 311 17 33 473 41 493 1.94e-17 85.5
MS.gene041220.t1 MTR_8g104030 23.750 240 165 5 233 460 8 241 2.39e-17 82.8
MS.gene041220.t1 MTR_8g036185 24.848 330 218 9 163 470 168 489 2.67e-17 85.1
MS.gene041220.t1 MTR_7g012860 26.496 234 154 7 235 462 241 462 2.84e-17 84.7
MS.gene041220.t1 MTR_0287s0060 26.496 234 154 7 235 462 241 462 2.84e-17 84.7
MS.gene041220.t1 MTR_2g072250 22.500 440 302 14 70 493 97 513 3.82e-17 84.3
MS.gene041220.t1 MTR_8g098565 29.213 178 122 3 295 469 302 478 4.10e-17 84.3
MS.gene041220.t1 MTR_8g042060 22.151 465 314 15 48 493 88 523 6.50e-17 84.0
MS.gene041220.t1 MTR_8g042060 26.733 202 131 4 297 493 298 487 1.37e-16 82.8
MS.gene041220.t1 MTR_3g104560 27.969 261 164 9 245 495 156 402 1.43e-16 82.0
MS.gene041220.t1 MTR_5g070920 26.293 232 157 5 233 455 233 459 1.44e-16 82.8
MS.gene041220.t1 MTR_5g034900 27.315 216 152 4 282 494 304 517 1.53e-16 82.8
MS.gene041220.t1 MTR_4g104610 22.703 370 240 10 144 487 142 491 1.91e-16 82.4
MS.gene041220.t1 MTR_8g035790 40.404 99 55 3 398 494 1 97 1.92e-16 75.5
MS.gene041220.t1 MTR_8g076290 26.852 216 138 7 242 444 242 450 2.16e-16 82.0
MS.gene041220.t1 MTR_3g104560 27.969 261 164 9 245 495 291 537 2.28e-16 82.0
MS.gene041220.t1 MTR_7g103450 29.961 257 158 12 242 493 267 506 2.55e-16 82.0
MS.gene041220.t1 MTR_5g009110 26.159 302 188 11 109 388 1 289 2.71e-16 80.1
MS.gene041220.t1 MTR_2g010290 25.283 265 180 7 236 494 280 532 2.84e-16 82.0
MS.gene041220.t1 MTR_8g012585 21.519 395 278 10 121 494 66 449 3.35e-16 81.3
MS.gene041220.t1 MTR_2g061750 28.962 183 105 7 74 237 12 188 3.56e-16 77.8
MS.gene041220.t1 MTR_2g061740 28.962 183 105 7 74 237 12 188 4.07e-16 77.4
MS.gene041220.t1 MTR_6g008640 22.334 497 303 18 25 473 36 497 4.09e-16 81.3
MS.gene041220.t1 MTR_0181s0030 22.993 461 322 17 25 470 31 473 6.43e-16 80.5
MS.gene041220.t1 MTR_8g104100 23.558 208 146 4 260 460 21 222 7.10e-16 78.2
MS.gene041220.t1 MTR_2g062680 32.353 136 61 2 286 420 32 137 7.84e-16 76.3
MS.gene041220.t1 MTR_2g072380 27.638 199 133 4 297 493 161 350 1.00e-15 79.0
MS.gene041220.t1 MTR_2g072310 27.136 199 134 4 297 493 161 350 1.01e-15 79.0
MS.gene041220.t1 MTR_6g004570 43.519 108 39 4 243 332 6 109 1.65e-15 76.6
MS.gene041220.t1 MTR_2g072380 27.638 199 133 4 297 493 301 490 1.69e-15 79.3
MS.gene041220.t1 MTR_8g042040 22.222 459 283 15 58 493 99 506 1.94e-15 79.3
MS.gene041220.t1 MTR_1g022040 22.581 434 300 14 70 493 95 502 1.96e-15 79.0
MS.gene041220.t1 MTR_2g010320 24.104 307 209 10 203 494 206 503 2.00e-15 79.0
MS.gene041220.t1 MTR_8g469360 22.611 429 283 14 85 493 24 423 2.88e-15 78.2
MS.gene041220.t1 MTR_0171s0030 26.357 258 171 8 222 467 138 388 3.44e-15 77.8
MS.gene041220.t1 MTR_2g010330 28.249 177 124 3 295 469 305 480 3.63e-15 78.2
MS.gene041220.t1 MTR_5g070690 25.101 247 168 5 240 476 238 477 4.20e-15 78.2
MS.gene041220.t1 MTR_5g070800 25.101 247 168 5 240 476 238 477 4.20e-15 78.2
MS.gene041220.t1 MTR_5g070710 24.308 325 214 10 145 455 151 457 5.70e-15 77.8
MS.gene041220.t1 MTR_7g012330 24.786 234 157 7 242 469 249 469 7.03e-15 77.4
MS.gene041220.t1 MTR_6g008430 29.940 167 109 4 284 449 307 466 7.82e-15 77.4
MS.gene041220.t1 MTR_2g010280 25.820 244 169 5 236 469 235 476 9.44e-15 77.0
MS.gene041220.t1 MTR_6g084770 25.726 241 159 7 233 460 233 466 1.21e-14 76.6
MS.gene041220.t1 MTR_2g010380 22.951 244 176 5 236 469 241 482 2.59e-14 75.5
MS.gene041220.t1 MTR_4g104540 29.448 163 109 3 282 444 220 376 3.47e-14 74.7
MS.gene041220.t1 MTR_5g091760 22.769 325 220 10 143 463 150 447 3.55e-14 75.1
MS.gene041220.t1 MTR_5g070830 25.126 199 140 3 266 460 382 575 3.82e-14 75.5
MS.gene041220.t1 MTR_1g091003 24.771 218 156 5 245 462 248 457 3.98e-14 75.1
MS.gene041220.t1 MTR_4g094775 23.932 234 162 6 240 473 250 467 4.31e-14 75.1
MS.gene041220.t1 MTR_4g104570 30.464 151 99 3 294 444 1 145 5.90e-14 71.2
MS.gene041220.t1 MTR_1g091023 24.545 220 154 6 245 462 248 457 6.44e-14 74.3
MS.gene041220.t1 MTR_4g088420 26.519 181 127 3 294 473 31 206 8.10e-14 71.6
MS.gene041220.t1 MTR_0171s0010 27.354 223 142 8 254 469 266 475 8.73e-14 73.9
MS.gene041220.t1 MTR_1g091010 24.312 218 157 5 245 462 247 456 1.33e-13 73.2
MS.gene041220.t1 MTR_8g063280 26.131 199 139 4 267 463 272 464 1.63e-13 73.2
MS.gene041220.t1 MTR_2g072260 20.833 432 299 14 80 493 104 510 1.76e-13 73.2
MS.gene041220.t1 MTR_4g031820 22.018 436 287 15 70 493 111 505 2.28e-13 72.8
MS.gene041220.t1 MTR_4g088195 21.925 374 246 14 121 471 128 478 2.45e-13 72.8
MS.gene041220.t1 MTR_6g084900 22.944 231 163 5 240 460 3 228 3.22e-13 70.5
MS.gene041220.t1 MTR_7g075610 28.155 206 128 6 266 463 274 467 3.32e-13 72.0
MS.gene041220.t1 MTR_2g072420 30.070 143 94 3 356 496 5 143 3.35e-13 67.4
MS.gene041220.t1 MTR_5g026520 27.429 175 118 5 277 448 292 460 3.42e-13 72.0
MS.gene041220.t1 MTR_3g436390 26.522 230 154 8 232 455 238 458 3.71e-13 72.0
MS.gene041220.t1 MTR_2g061200 20.131 457 305 12 64 493 105 528 3.84e-13 72.0
MS.gene041220.t1 MTR_4g031820 22.870 446 293 17 70 493 111 527 4.72e-13 71.6
MS.gene041220.t1 MTR_4g077210 25.229 218 154 4 233 448 241 451 5.75e-13 71.2
MS.gene041220.t1 MTR_5g470730 25.090 279 178 7 157 420 164 426 5.90e-13 71.2
MS.gene041220.t1 MTR_5g007460 22.822 241 157 4 230 470 236 447 6.85e-13 71.2
MS.gene041220.t1 MTR_4g078110 27.513 189 130 4 257 444 240 422 7.42e-13 70.9
MS.gene041220.t1 MTR_5g019010 23.094 459 295 18 32 464 40 466 9.10e-13 70.9
MS.gene041220.t1 MTR_2g010300 25.490 204 133 5 295 494 301 489 1.01e-12 70.5
MS.gene041220.t1 MTR_0022s0290 24.000 225 153 7 242 455 255 472 1.04e-12 70.5
MS.gene041220.t1 MTR_5g070700 22.692 260 183 6 240 489 240 491 1.06e-12 70.5
MS.gene041220.t1 MTR_8g089800 26.337 243 162 7 239 473 237 470 1.10e-12 70.5
MS.gene041220.t1 MTR_8g012970 25.778 225 157 4 257 480 258 473 1.26e-12 70.5
MS.gene041220.t1 MTR_5g056720 25.781 256 154 8 244 489 191 420 1.37e-12 70.1
MS.gene041220.t1 MTR_5g010750 20.825 509 349 19 1 494 1 470 1.62e-12 70.1
MS.gene041220.t1 MTR_4g088400 25.610 246 171 6 233 473 256 494 1.69e-12 70.1
MS.gene041220.t1 MTR_4g104550 22.082 317 212 11 143 444 141 437 1.82e-12 69.7
MS.gene041220.t1 MTR_7g056103 21.369 482 324 19 6 460 16 469 1.91e-12 69.7
MS.gene041220.t1 MTR_4g026200 22.511 231 170 7 235 463 237 460 2.30e-12 69.3
MS.gene041220.t1 MTR_3g076530 24.138 232 153 8 240 463 251 467 2.60e-12 69.3
MS.gene041220.t1 MTR_1g031700 25.616 203 131 7 266 462 271 459 2.83e-12 69.3
MS.gene041220.t1 MTR_1750s0010 25.658 152 107 3 293 444 1 146 3.28e-12 64.7
MS.gene041220.t1 MTR_5g018500 24.074 162 116 4 306 465 4 160 3.28e-12 65.9
MS.gene041220.t1 MTR_5g070850 21.727 359 249 12 110 454 119 459 4.43e-12 68.6
MS.gene041220.t1 MTR_5g010750 21.294 479 325 18 1 464 1 442 4.81e-12 68.2
MS.gene041220.t1 MTR_1g107300 23.000 200 130 5 300 494 9 189 5.76e-12 65.5
MS.gene041220.t1 MTR_1g107295 21.569 255 168 6 227 460 232 475 8.53e-12 67.8
MS.gene041220.t1 MTR_4g088170 22.133 375 246 14 121 471 128 480 1.02e-11 67.4
MS.gene041220.t1 MTR_3g025260 22.957 257 179 8 220 466 228 475 1.14e-11 67.4
MS.gene041220.t1 MTR_4g088160 20.755 371 246 14 121 467 128 474 1.15e-11 67.4
MS.gene041220.t1 MTR_4g088425 27.755 245 161 8 233 470 239 474 1.34e-11 67.0
MS.gene041220.t1 MTR_1g031710 26.590 173 112 5 253 420 67 229 1.83e-11 65.5
MS.gene041220.t1 MTR_7g075540 27.053 207 128 8 266 463 272 464 2.01e-11 66.6
MS.gene041220.t1 MTR_5g007450 23.109 238 144 6 230 463 259 461 2.06e-11 66.6
MS.gene041220.t1 MTR_4g088405 28.125 192 130 4 284 473 223 408 2.48e-11 66.2
MS.gene041220.t1 MTR_1g103670 25.405 185 119 6 266 444 271 442 3.33e-11 65.9
MS.gene041220.t1 MTR_5g070840 26.619 139 97 2 324 460 1 136 3.34e-11 62.4
MS.gene041220.t1 MTR_4g109470 22.594 239 170 5 233 463 236 467 3.37e-11 65.9
MS.gene041220.t1 MTR_5g095260 23.099 355 238 14 121 463 134 465 3.70e-11 65.9
MS.gene041220.t1 MTR_2g450040 26.016 246 162 10 228 462 242 478 4.62e-11 65.5
MS.gene041220.t1 MTR_3g076550 24.274 379 241 15 121 487 128 472 4.64e-11 65.5
MS.gene041220.t1 MTR_4g062500 21.552 232 163 8 242 460 248 473 4.84e-11 65.5
MS.gene041220.t1 MTR_8g469300 22.650 234 163 7 222 444 226 452 5.16e-11 65.5
MS.gene041220.t1 MTR_1g023730 23.789 227 157 7 242 463 260 475 7.68e-11 64.7
MS.gene041220.t1 MTR_5g073230 21.488 242 168 7 233 463 223 453 8.85e-11 64.3
MS.gene041220.t1 MTR_5g007550 22.449 245 151 6 230 470 259 468 9.25e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041220.t1 AT2G23180 44.747 514 264 4 1 495 1 513 3.04e-159 462
MS.gene041220.t1 AT4G39490 43.822 518 269 4 1 496 1 518 1.87e-158 460
MS.gene041220.t1 AT2G21910 46.771 511 254 7 1 496 1 508 1.33e-153 447
MS.gene041220.t1 AT4G39500 44.444 504 250 6 12 494 22 516 3.79e-150 439
MS.gene041220.t1 AT4G39480 44.773 507 264 3 6 496 9 515 3.59e-148 434
MS.gene041220.t1 AT1G57750 42.262 504 271 4 1 494 3 496 3.33e-147 431
MS.gene041220.t1 AT4G39500 45.106 470 241 4 38 494 1 466 7.46e-145 424
MS.gene041220.t1 AT1G65340 43.478 506 264 4 3 493 4 502 7.76e-145 425
MS.gene041220.t1 AT4G32170 42.829 516 260 7 1 494 1 503 6.52e-144 422
MS.gene041220.t1 AT5G52320 44.239 486 250 5 22 493 23 501 2.25e-143 421
MS.gene041220.t1 AT1G47620 43.841 479 245 4 33 494 44 515 7.96e-143 420
MS.gene041220.t1 AT4G39510 42.685 499 259 4 14 494 16 505 1.39e-142 419
MS.gene041220.t1 AT5G52320 44.283 481 247 5 22 488 23 496 9.11e-142 417
MS.gene041220.t1 AT5G08250 39.489 509 285 8 6 496 39 542 2.78e-129 387
MS.gene041220.t1 AT5G23190 38.340 506 296 5 6 496 38 542 4.96e-129 386
MS.gene041220.t1 AT5G02900 42.063 504 235 9 12 494 12 479 6.04e-128 381
MS.gene041220.t1 AT5G08250 39.834 482 267 8 33 496 4 480 1.31e-124 373
MS.gene041220.t1 AT3G26125 38.911 496 276 8 25 496 42 534 2.96e-116 353
MS.gene041220.t1 AT1G63710 38.797 482 272 9 33 496 33 509 5.31e-114 347
MS.gene041220.t1 AT1G57750 40.278 432 238 4 1 422 3 424 1.47e-113 342
MS.gene041220.t1 AT1G01600 38.356 511 285 11 13 496 8 515 4.76e-113 345
MS.gene041220.t1 AT2G45970 38.969 485 270 9 33 496 33 512 1.62e-112 343
MS.gene041220.t1 AT1G13150 38.966 503 278 13 15 496 25 519 7.59e-112 341
MS.gene041220.t1 AT1G24540 37.605 476 282 5 33 494 46 520 3.21e-111 339
MS.gene041220.t1 AT1G13140 38.398 487 272 11 31 496 47 526 3.53e-111 340
MS.gene041220.t1 AT5G58860 38.554 498 288 8 12 494 14 508 7.88e-111 338
MS.gene041220.t1 AT4G00360 38.114 509 287 10 13 496 8 513 2.27e-110 338
MS.gene041220.t1 AT1G13140 37.448 478 263 10 31 496 47 500 5.01e-108 331
MS.gene041220.t1 AT3G56630 35.967 481 275 15 33 495 34 499 1.60e-87 278
MS.gene041220.t1 AT1G34540 34.937 478 283 14 33 495 34 498 7.65e-86 273
MS.gene041220.t1 AT2G27690 36.744 430 257 7 74 495 73 495 2.48e-85 271
MS.gene041220.t1 AT1G69500 31.740 523 308 12 13 495 11 524 1.29e-82 265
MS.gene041220.t1 AT2G45510 34.542 469 283 12 34 487 42 501 1.02e-81 263
MS.gene041220.t1 AT3G48520 34.467 441 261 9 69 495 74 500 2.57e-80 259
MS.gene041220.t1 AT2G44890 33.474 475 280 16 34 487 42 501 2.02e-78 254
MS.gene041220.t1 AT5G63450 34.180 433 256 11 77 494 84 502 1.15e-75 247
MS.gene041220.t1 AT5G63450 34.180 433 256 11 77 494 142 560 5.29e-75 247
MS.gene041220.t1 AT2G44890 32.340 470 274 14 34 487 42 483 1.36e-74 244
MS.gene041220.t1 AT3G01900 31.315 479 303 11 26 494 28 490 4.17e-71 234
MS.gene041220.t1 AT1G31800 26.932 453 291 18 61 495 140 570 5.00e-35 138
MS.gene041220.t1 AT3G53130 26.606 436 288 16 75 494 120 539 4.31e-32 129
MS.gene041220.t1 AT2G26710 24.053 449 295 13 61 493 96 514 5.45e-26 111
MS.gene041220.t1 AT2G46950 23.333 450 300 14 59 492 148 568 2.40e-25 110
MS.gene041220.t1 AT5G52400 24.099 444 303 14 58 492 99 517 5.35e-22 99.4
MS.gene041220.t1 AT4G27710 24.945 457 288 21 57 491 91 514 1.57e-21 98.2
MS.gene041220.t1 AT2G46960 22.727 462 296 16 57 492 89 515 5.72e-21 96.3
MS.gene041220.t1 AT5G24900 23.310 429 290 15 82 491 116 524 7.49e-21 95.9
MS.gene041220.t1 AT5G24900 23.239 426 288 15 85 491 2 407 1.93e-20 94.0
MS.gene041220.t1 AT1G66030 30.588 170 100 3 1 159 1 163 2.13e-20 88.6
MS.gene041220.t1 AT5G51900 38.806 134 67 2 216 334 3 136 2.73e-20 90.5
MS.gene041220.t1 AT4G13310 27.356 329 208 11 124 444 137 442 1.23e-19 92.0
MS.gene041220.t1 AT3G14660 22.467 454 304 17 57 493 89 511 3.45e-19 90.9
MS.gene041220.t1 AT3G48300 26.829 328 221 11 167 489 164 477 4.59e-19 90.5
MS.gene041220.t1 AT3G48300 26.829 328 221 11 167 489 166 479 4.63e-19 90.5
MS.gene041220.t1 AT5G24910 21.429 476 317 17 46 494 87 532 4.71e-19 90.5
MS.gene041220.t1 AT3G14640 22.271 458 302 16 57 493 111 535 6.24e-19 90.1
MS.gene041220.t1 AT3G14640 22.271 458 302 16 57 493 89 513 7.39e-19 89.7
MS.gene041220.t1 AT3G14630 23.656 465 307 17 46 493 74 507 8.13e-19 89.7
MS.gene041220.t1 AT2G27000 24.679 389 268 12 121 496 132 508 8.54e-19 89.7
MS.gene041220.t1 AT3G14680 23.568 454 299 18 57 493 89 511 9.53e-19 89.4
MS.gene041220.t1 AT4G13290 28.772 285 175 8 167 444 172 435 1.12e-18 89.4
MS.gene041220.t1 AT3G14630 23.656 465 307 17 46 493 129 562 1.20e-18 89.4
MS.gene041220.t1 AT3G14650 22.687 454 303 18 57 493 89 511 1.26e-18 89.0
MS.gene041220.t1 AT3G61040 28.302 212 145 5 253 463 255 460 1.31e-18 89.0
MS.gene041220.t1 AT3G25180 22.062 417 290 10 75 473 84 483 1.58e-18 89.0
MS.gene041220.t1 AT3G14620 23.673 452 288 16 56 486 92 507 1.01e-17 86.3
MS.gene041220.t1 AT1G64940 22.878 271 197 4 227 489 237 503 4.76e-17 84.3
MS.gene041220.t1 AT4G15350 23.858 394 265 15 121 496 128 504 1.42e-16 82.8
MS.gene041220.t1 AT3G14660 26.493 268 172 9 236 493 113 365 1.44e-16 81.6
MS.gene041220.t1 AT3G14690 21.315 441 302 15 70 493 99 511 2.12e-16 82.4
MS.gene041220.t1 AT3G14690 21.315 441 302 15 70 493 134 546 2.38e-16 82.0
MS.gene041220.t1 AT2G46960 22.392 393 256 13 121 492 35 399 3.36e-16 80.9
MS.gene041220.t1 AT4G37340 25.000 288 196 8 165 448 169 440 3.74e-16 81.3
MS.gene041220.t1 AT3G20940 27.477 222 147 6 240 455 255 468 6.93e-16 80.5
MS.gene041220.t1 AT3G20140 25.000 316 212 11 152 459 166 464 9.22e-16 80.1
MS.gene041220.t1 AT1G64950 24.771 218 158 3 274 489 289 502 1.69e-15 79.3
MS.gene041220.t1 AT3G48270 26.950 282 184 12 167 442 166 431 2.52e-15 79.0
MS.gene041220.t1 AT5G38450 22.469 405 263 11 109 492 140 514 3.67e-15 78.6
MS.gene041220.t1 AT3G20110 25.075 335 232 9 121 450 132 452 5.40e-15 77.8
MS.gene041220.t1 AT2G45580 26.050 238 152 8 235 463 96 318 6.53e-15 76.6
MS.gene041220.t1 AT3G20935 29.480 173 111 5 294 462 134 299 8.10e-15 76.3
MS.gene041220.t1 AT2G45580 26.050 238 152 8 235 463 250 472 1.05e-14 77.0
MS.gene041220.t1 AT5G06900 25.108 231 158 7 240 467 247 465 1.73e-14 76.3
MS.gene041220.t1 AT4G15360 23.907 343 232 13 121 450 133 459 6.42e-14 74.7
MS.gene041220.t1 AT4G37410 23.511 319 224 9 145 459 147 449 9.24e-14 73.9
MS.gene041220.t1 AT3G48310 24.290 317 214 11 163 471 163 461 1.06e-13 73.6
MS.gene041220.t1 AT5G35715 23.810 420 245 16 71 460 23 397 1.13e-13 73.6
MS.gene041220.t1 AT4G13770 22.944 231 173 4 238 467 241 467 1.48e-13 73.2
MS.gene041220.t1 AT1G01190 26.699 206 135 7 298 494 333 531 1.98e-13 73.2
MS.gene041220.t1 AT1G01190 26.699 206 135 7 298 494 338 536 2.02e-13 73.2
MS.gene041220.t1 AT1G50520 23.324 343 235 14 121 450 138 465 2.36e-13 72.8
MS.gene041220.t1 AT1G75130 22.297 444 289 15 61 486 90 495 2.45e-13 72.8
MS.gene041220.t1 AT2G12190 23.636 220 160 4 274 489 289 504 3.30e-13 72.4
MS.gene041220.t1 AT3G48280 23.944 284 189 8 168 442 166 431 4.38e-13 71.6
MS.gene041220.t1 AT1G66540 24.080 299 197 10 159 448 50 327 4.99e-13 71.2
MS.gene041220.t1 AT1G67110 24.889 225 150 4 273 492 298 508 9.42e-13 70.9
MS.gene041220.t1 AT5G47990 22.368 304 216 9 155 449 169 461 1.37e-12 70.5
MS.gene041220.t1 AT3G26270 24.691 243 161 7 233 465 240 470 1.39e-12 70.1
MS.gene041220.t1 AT1G64930 25.110 227 161 6 274 495 288 510 1.41e-12 70.1
MS.gene041220.t1 AT3G03470 23.256 258 174 5 244 494 269 509 2.15e-12 69.7
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 170 511 2.43e-12 69.7
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 170 511 2.43e-12 69.7
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 33 374 2.67e-12 68.9
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 33 374 2.67e-12 68.9
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 33 374 2.67e-12 68.9
MS.gene041220.t1 AT3G20080 24.444 360 235 12 156 496 33 374 2.67e-12 68.9
MS.gene041220.t1 AT2G46660 23.789 227 157 7 240 462 279 493 3.38e-12 68.9
MS.gene041220.t1 AT2G23220 24.085 328 228 10 121 444 141 451 3.49e-12 68.9
MS.gene041220.t1 AT1G33720 25.238 210 145 5 293 496 200 403 3.70e-12 68.6
MS.gene041220.t1 AT5G10610 23.237 482 301 22 9 459 7 450 3.93e-12 68.9
MS.gene041220.t1 AT4G20240 23.659 410 261 15 29 416 34 413 4.57e-12 68.6
MS.gene041220.t1 AT2G24180 23.237 241 165 6 256 487 262 491 5.20e-12 68.6
MS.gene041220.t1 AT1G66540 23.875 289 190 10 169 448 1 268 8.32e-12 67.0
MS.gene041220.t1 AT4G37400 24.415 299 206 9 166 459 166 449 8.79e-12 67.8
MS.gene041220.t1 AT2G26170 24.409 254 173 7 251 494 277 521 1.05e-11 67.4
MS.gene041220.t1 AT2G45560 24.910 277 184 9 230 495 246 509 1.05e-11 67.4
MS.gene041220.t1 AT2G26170 24.409 254 173 7 251 494 194 438 1.15e-11 67.0
MS.gene041220.t1 AT3G20130 26.728 217 145 8 241 450 253 462 1.34e-11 67.0
MS.gene041220.t1 AT3G20130 26.728 217 145 8 241 450 225 434 1.54e-11 67.0
MS.gene041220.t1 AT2G30770 27.072 181 127 3 292 472 293 468 1.89e-11 66.6
MS.gene041220.t1 AT2G45550 24.464 233 162 6 270 496 286 510 2.28e-11 66.6
MS.gene041220.t1 AT5G05260 25.962 208 145 5 241 447 273 472 3.49e-11 65.9
MS.gene041220.t1 AT3G28740 24.294 354 222 13 121 459 134 456 3.59e-11 65.9
MS.gene041220.t1 AT3G20100 23.779 307 209 12 156 450 169 462 4.34e-11 65.5
MS.gene041220.t1 AT2G45570 23.162 272 185 6 235 494 250 509 9.39e-11 64.7

Find 98 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATTGGAGAAATATTT+TGG 0.134143 7.2:+65577510 MS.gene041220:CDS
GCTCTCTCACATGGAATTTC+AGG 0.159034 7.2:-65578091 None:intergenic
TTCTGAGAAATCCACCTTTC+TGG 0.163522 7.2:-65578739 None:intergenic
TACCATCAAGTGAACATAAT+TGG 0.197349 7.2:+65578491 MS.gene041220:CDS
TCTTGTGGAAGCTGCAAAAT+TGG 0.201502 7.2:+65578164 MS.gene041220:CDS
TCGGAAGGGTGGAGGAAATA+TGG 0.227134 7.2:+65578692 MS.gene041220:CDS
GAACATAATTGGAAAGATTT+AGG 0.232318 7.2:+65578502 MS.gene041220:CDS
TTGTCCTTGCATTTCTCTTT+TGG 0.233225 7.2:-65578263 None:intergenic
AACAGAAAGACTTGGGATTA+TGG 0.258538 7.2:-65578914 None:intergenic
AACATATGTTCTGTGGTATT+AGG 0.264357 7.2:+65578037 MS.gene041220:CDS
TTCCAATTATGTTCACTTGA+TGG 0.285884 7.2:-65578493 None:intergenic
TGTAATGTGTTGCACGTTCT+TGG 0.286012 7.2:-65577744 None:intergenic
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.2:+65578840 MS.gene041220:CDS
TGCAGCTTCCACAAGAGTTT+TGG 0.307166 7.2:-65578157 None:intergenic
TTCTGTTGAGCCTCCAATAA+TGG 0.310818 7.2:-65577556 None:intergenic
TTAACCATGGTCCTTCAAAA+AGG 0.318367 7.2:-65577691 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7.2:+65578807 MS.gene041220:CDS
AGATCAATAGAAAGACATTT+AGG 0.370231 7.2:-65578067 None:intergenic
TGGAAAGATTTAGGAGCAAA+AGG 0.375361 7.2:+65578511 MS.gene041220:CDS
GAAACACACCAATCACAAAA+TGG 0.375398 7.2:+65577576 MS.gene041220:CDS
ACAGAAAGACTTGGGATTAT+GGG 0.382050 7.2:-65578913 None:intergenic
AAATTCATTGCTTTCAATGC+TGG 0.386232 7.2:+65578790 MS.gene041220:CDS
CGGAAGGGTGGAGGAAATAT+GGG 0.397563 7.2:+65578693 MS.gene041220:CDS
GAAAGCAATGAATTTGTAAG+AGG 0.414835 7.2:-65578782 None:intergenic
TTAGGTCTGATTCACACATT+TGG 0.425646 7.2:+65577840 MS.gene041220:CDS
TGTGCAGATTTATGCTCAAA+AGG 0.438259 7.2:-65578598 None:intergenic
CTATTAGCTCGGGCCTTACC+TGG 0.446394 7.2:+65578401 MS.gene041220:CDS
GTAATGTGTTGCACGTTCTT+GGG 0.456449 7.2:-65577743 None:intergenic
CGGAGGACACATTGTTCATA+AGG 0.457115 7.2:+65578125 MS.gene041220:CDS
AGCAAGTTAGTTTACCTACA+TGG 0.459663 7.2:+65578538 MS.gene041220:CDS
ACACATGAAACATGGCTTGA+AGG 0.461488 7.2:+65578942 MS.gene041220:CDS
ATCACAAAATGGCCTGTGCT+TGG 0.463931 7.2:+65577587 MS.gene041220:CDS
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7.2:+65578808 MS.gene041220:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.474975 7.2:+65578512 MS.gene041220:CDS
CCTGTGCTTGGAATGCTACC+TGG 0.476136 7.2:+65577599 MS.gene041220:CDS
CTGCAAAATTGGTTTCAAGT+TGG 0.480614 7.2:+65578175 MS.gene041220:CDS
ATAATGTATGTGTTTGGCAT+TGG 0.480634 7.2:+65577497 None:intergenic
ATGTGCTTCCTAGTGGACAT+AGG 0.486334 7.2:+65578629 MS.gene041220:CDS
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7.2:+65578813 MS.gene041220:CDS
AGAATCTTAGCTTCAATCAA+AGG 0.493189 7.2:-65578448 None:intergenic
TTGCACGTTCTTGGGATCAC+TGG 0.495887 7.2:-65577735 None:intergenic
CTCTCTCACATGGAATTTCA+GGG 0.496357 7.2:-65578090 None:intergenic
GCTTGGAATTTAAACCAGAA+AGG 0.498570 7.2:+65578725 MS.gene041220:CDS
GACATAACTTTAAAACAAAA+CGG 0.501657 7.2:+65577659 MS.gene041220:CDS
TCAATTAATCTACTTGCAGC+TGG 0.503336 7.2:+65578370 MS.gene041220:CDS
TGTCCACTAGGAAGCACATC+AGG 0.504227 7.2:-65578625 None:intergenic
ACATTGATAATGTATGTGTT+TGG 0.505869 7.2:+65577491 None:intergenic
AATATCATTATGAATGAAGT+AGG 0.506125 7.2:+65578304 MS.gene041220:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.2:+65578708 MS.gene041220:CDS
TGTGTCCTCCGCTAGTGTAA+AGG 0.525215 7.2:-65578113 None:intergenic
TGGAAGAGATACTATTAGCT+CGG 0.527180 7.2:+65578390 MS.gene041220:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7.2:-65578814 None:intergenic
AGCACAAGATTCGAAAACTA+CGG 0.533439 7.2:+65577767 MS.gene041220:CDS
ATTATGAATGAAGTAGGAGA+TGG 0.541098 7.2:+65578310 MS.gene041220:CDS
TGTGCTTCCTAGTGGACATA+GGG 0.549066 7.2:+65578630 MS.gene041220:CDS
TCGTTGCAATCCATTATTGG+AGG 0.556704 7.2:+65577546 MS.gene041220:CDS
GAAAGGTGGATTTCTCAGAA+AGG 0.556835 7.2:+65578742 MS.gene041220:CDS
ATACTCCGTCGGAAGGGTGG+AGG 0.557016 7.2:+65578684 MS.gene041220:CDS
TGGAATTTAAACCAGAAAGG+TGG 0.560001 7.2:+65578728 MS.gene041220:CDS
GGAAGAGATACTATTAGCTC+GGG 0.561271 7.2:+65578391 MS.gene041220:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.2:+65578677 MS.gene041220:CDS
TGTAAGACAACAGAAAGACT+TGG 0.564398 7.2:-65578922 None:intergenic
AGTGTAAAGGCTCTCTCACA+TGG 0.565394 7.2:-65578100 None:intergenic
CCAGGTAGCATTCCAAGCAC+AGG 0.567414 7.2:-65577599 None:intergenic
CACAACGTATCCAACATTCA+CGG 0.568204 7.2:+65577629 MS.gene041220:CDS
TCTATACTCCGTCGGAAGGG+TGG 0.569109 7.2:+65578681 MS.gene041220:CDS
TATTTCCTCCACCCTTCCGA+CGG 0.573423 7.2:-65578689 None:intergenic
GCACAAGATTCGAAAACTAC+GGG 0.574750 7.2:+65577768 MS.gene041220:CDS
CTTTGACAACATATGTTCTG+TGG 0.575024 7.2:+65578030 MS.gene041220:CDS
GTCTACATAACCGTGAATGT+TGG 0.575206 7.2:-65577639 None:intergenic
ATCTTAAGCCAAAACTCTTG+TGG 0.576068 7.2:+65578149 MS.gene041220:CDS
TTCTCTATACTCCGTCGGAA+GGG 0.579589 7.2:+65578678 MS.gene041220:CDS
AAAGCAATGAATTTGTAAGA+GGG 0.580193 7.2:-65578781 None:intergenic
ATGTTCATATTTGTTAACCA+TGG 0.582823 7.2:-65577704 None:intergenic
CACAGAACATATGTTGTCAA+AGG 0.582988 7.2:-65578029 None:intergenic
GATTTATGCTCAAAAGGTAT+CGG 0.588173 7.2:-65578592 None:intergenic
GGTGGATTTCTCAGAAAGGA+GGG 0.598377 7.2:+65578746 MS.gene041220:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.2:+65578560 MS.gene041220:CDS
AAACCTGATGTGCTTCCTAG+TGG 0.606972 7.2:+65578622 MS.gene041220:CDS
GAATTATCACATTCAAGTGG+TGG 0.608088 7.2:+65578882 MS.gene041220:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7.2:+65578879 MS.gene041220:CDS
AGGTGGATTTCTCAGAAAGG+AGG 0.609698 7.2:+65578745 MS.gene041220:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.2:+65578673 MS.gene041220:CDS
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.2:+65578797 MS.gene041220:CDS
GTTGTCTTACACATGAAACA+TGG 0.631184 7.2:+65578934 MS.gene041220:CDS
GACTCAACCCTATGTCCACT+AGG 0.632364 7.2:-65578637 None:intergenic
GTAAGACAACAGAAAGACTT+GGG 0.634736 7.2:-65578921 None:intergenic
CTTCACATAAAGCTCCATGT+AGG 0.635547 7.2:-65578552 None:intergenic
ATGGTTAACAAATATGAACA+TGG 0.638409 7.2:+65577706 MS.gene041220:CDS
GGAAGGGTGGAGGAAATATG+GGG 0.642362 7.2:+65578694 MS.gene041220:CDS
AGATTCGAAAACTACGGGAA+AGG 0.642747 7.2:+65577773 MS.gene041220:CDS
AAAACCAAAAGAGAAATGCA+AGG 0.650772 7.2:+65578259 MS.gene041220:CDS
TTATGCTCAAAAGGTATCGG+CGG 0.659417 7.2:-65578589 None:intergenic
GATACGTTGTGTAAGAGACC+AGG 0.668163 7.2:-65577617 None:intergenic
TGAGAGAGCCTTTACACTAG+CGG 0.678400 7.2:+65578105 MS.gene041220:CDS
TATCGGCGGATAAAGCCTCA+AGG 0.679760 7.2:-65578575 None:intergenic
GAGAGCCTTTACACTAGCGG+AGG 0.710609 7.2:+65578108 MS.gene041220:CDS
ATAACTTTAAAACAAAACGG+AGG 0.737890 7.2:+65577662 MS.gene041220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCATTATGAATGAAGT+AGG + chr7.2:65578304-65578323 MS.gene041220:CDS 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG + chr7.2:65578002-65578021 MS.gene041220:CDS 20.0%
!!! GACATAACTTTAAAACAAAA+CGG + chr7.2:65577659-65577678 MS.gene041220:CDS 20.0%
!!! GTTACAAATTTTTTTCTCAA+CGG - chr7.2:65577933-65577952 None:intergenic 20.0%
! AAAGCAATGAATTTGTAAGA+GGG - chr7.2:65578784-65578803 None:intergenic 25.0%
! AGATCAATAGAAAGACATTT+AGG - chr7.2:65578070-65578089 None:intergenic 25.0%
! ATGGTTAACAAATATGAACA+TGG + chr7.2:65577706-65577725 MS.gene041220:CDS 25.0%
! GAACATAATTGGAAAGATTT+AGG + chr7.2:65578502-65578521 MS.gene041220:CDS 25.0%
!! ATGTTCATATTTGTTAACCA+TGG - chr7.2:65577707-65577726 None:intergenic 25.0%
!!! ATAACTTTAAAACAAAACGG+AGG + chr7.2:65577662-65577681 MS.gene041220:CDS 25.0%
AAAACCAAAAGAGAAATGCA+AGG + chr7.2:65578259-65578278 MS.gene041220:CDS 30.0%
AAATTCATTGCTTTCAATGC+TGG + chr7.2:65578790-65578809 MS.gene041220:CDS 30.0%
AACATATGTTCTGTGGTATT+AGG + chr7.2:65578037-65578056 MS.gene041220:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG + chr7.2:65578840-65578859 MS.gene041220:CDS 30.0%
AGAATCTTAGCTTCAATCAA+AGG - chr7.2:65578451-65578470 None:intergenic 30.0%
ATTATGAATGAAGTAGGAGA+TGG + chr7.2:65578310-65578329 MS.gene041220:CDS 30.0%
GAAAGCAATGAATTTGTAAG+AGG - chr7.2:65578785-65578804 None:intergenic 30.0%
GTTGAATTATCACATTCAAG+TGG + chr7.2:65578879-65578898 MS.gene041220:CDS 30.0%
TACCATCAAGTGAACATAAT+TGG + chr7.2:65578491-65578510 MS.gene041220:CDS 30.0%
TTCCAATTATGTTCACTTGA+TGG - chr7.2:65578496-65578515 None:intergenic 30.0%
! GATTTATGCTCAAAAGGTAT+CGG - chr7.2:65578595-65578614 None:intergenic 30.0%
! TTCTTGGAGAAGGAATTTTT+AGG + chr7.2:65577822-65577841 MS.gene041220:CDS 30.0%
! TTGACCATGCTTCTAAAAAT+GGG + chr7.2:65577969-65577988 MS.gene041220:CDS 30.0%
! TTTCAAGCAGGAAAATTTTC+AGG + chr7.2:65577892-65577911 MS.gene041220:CDS 30.0%
! TTTTCGTTGCAATCCATTAT+TGG + chr7.2:65577543-65577562 MS.gene041220:CDS 30.0%
!! TGGCATTGGAGAAATATTTT+GGG + chr7.2:65577511-65577530 MS.gene041220:CDS 30.0%
!! TTGGCATTGGAGAAATATTT+TGG + chr7.2:65577510-65577529 MS.gene041220:CDS 30.0%
!!! AGAGAGATTTTTGAAGTTCT+TGG + chr7.2:65577806-65577825 MS.gene041220:CDS 30.0%
!!! ATTTTTGAAGTTCTTGGAGA+AGG + chr7.2:65577812-65577831 MS.gene041220:CDS 30.0%
AACAGAAAGACTTGGGATTA+TGG - chr7.2:65578917-65578936 None:intergenic 35.0%
ACAGAAAGACTTGGGATTAT+GGG - chr7.2:65578916-65578935 None:intergenic 35.0%
AGCACAAGATTCGAAAACTA+CGG + chr7.2:65577767-65577786 MS.gene041220:CDS 35.0%
ATCTTAAGCCAAAACTCTTG+TGG + chr7.2:65578149-65578168 MS.gene041220:CDS 35.0%
CACAGAACATATGTTGTCAA+AGG - chr7.2:65578032-65578051 None:intergenic 35.0%
CTTTGACAACATATGTTCTG+TGG + chr7.2:65578030-65578049 MS.gene041220:CDS 35.0%
GAAACACACCAATCACAAAA+TGG + chr7.2:65577576-65577595 MS.gene041220:CDS 35.0%
GAATTATCACATTCAAGTGG+TGG + chr7.2:65578882-65578901 MS.gene041220:CDS 35.0%
GCTTGGAATTTAAACCAGAA+AGG + chr7.2:65578725-65578744 MS.gene041220:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG + chr7.2:65578512-65578531 MS.gene041220:CDS 35.0%
GTAAGACAACAGAAAGACTT+GGG - chr7.2:65578924-65578943 None:intergenic 35.0%
GTTGTCTTACACATGAAACA+TGG + chr7.2:65578934-65578953 MS.gene041220:CDS 35.0%
TCAATTAATCTACTTGCAGC+TGG + chr7.2:65578370-65578389 MS.gene041220:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG + chr7.2:65578511-65578530 MS.gene041220:CDS 35.0%
TGGAAGAGATACTATTAGCT+CGG + chr7.2:65578390-65578409 MS.gene041220:CDS 35.0%
TGGAATTTAAACCAGAAAGG+TGG + chr7.2:65578728-65578747 MS.gene041220:CDS 35.0%
TGTAAGACAACAGAAAGACT+TGG - chr7.2:65578925-65578944 None:intergenic 35.0%
TGTGCAGATTTATGCTCAAA+AGG - chr7.2:65578601-65578620 None:intergenic 35.0%
TTAACCATGGTCCTTCAAAA+AGG - chr7.2:65577694-65577713 None:intergenic 35.0%
TTAGGTCTGATTCACACATT+TGG + chr7.2:65577840-65577859 MS.gene041220:CDS 35.0%
! AGCAAGTTAGTTTACCTACA+TGG + chr7.2:65578538-65578557 MS.gene041220:CDS 35.0%
! CTGCAAAATTGGTTTCAAGT+TGG + chr7.2:65578175-65578194 MS.gene041220:CDS 35.0%
! CTTGACCATGCTTCTAAAAA+TGG + chr7.2:65577968-65577987 MS.gene041220:CDS 35.0%
! TGACCATGCTTCTAAAAATG+GGG + chr7.2:65577970-65577989 MS.gene041220:CDS 35.0%
! TTGTCCTTGCATTTCTCTTT+TGG - chr7.2:65578266-65578285 None:intergenic 35.0%
!! ACTTCACTCAATTTTCAAGC+AGG + chr7.2:65577880-65577899 MS.gene041220:CDS 35.0%
AATATGGGGAGAAGATTGCT+TGG + chr7.2:65578708-65578727 MS.gene041220:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG + chr7.2:65578942-65578961 MS.gene041220:CDS 40.0%
AGATTCGAAAACTACGGGAA+AGG + chr7.2:65577773-65577792 MS.gene041220:CDS 40.0%
CACAACGTATCCAACATTCA+CGG + chr7.2:65577629-65577648 MS.gene041220:CDS 40.0%
CTCTCTCACATGGAATTTCA+GGG - chr7.2:65578093-65578112 None:intergenic 40.0%
CTTCACATAAAGCTCCATGT+AGG - chr7.2:65578555-65578574 None:intergenic 40.0%
GCACAAGATTCGAAAACTAC+GGG + chr7.2:65577768-65577787 MS.gene041220:CDS 40.0%
GGAAGAGATACTATTAGCTC+GGG + chr7.2:65578391-65578410 MS.gene041220:CDS 40.0%
GTAATGTGTTGCACGTTCTT+GGG - chr7.2:65577746-65577765 None:intergenic 40.0%
GTCTACATAACCGTGAATGT+TGG - chr7.2:65577642-65577661 None:intergenic 40.0%
GTGTATTCTCTATACTCCGT+CGG + chr7.2:65578673-65578692 MS.gene041220:CDS 40.0%
TCGTTGCAATCCATTATTGG+AGG + chr7.2:65577546-65577565 MS.gene041220:CDS 40.0%
TCTTGTGGAAGCTGCAAAAT+TGG + chr7.2:65578164-65578183 MS.gene041220:CDS 40.0%
TGTAATGTGTTGCACGTTCT+TGG - chr7.2:65577747-65577766 None:intergenic 40.0%
TTCTGTTGAGCCTCCAATAA+TGG - chr7.2:65577559-65577578 None:intergenic 40.0%
! GAAAGGTGGATTTCTCAGAA+AGG + chr7.2:65578742-65578761 MS.gene041220:CDS 40.0%
! GGAGGAACATTCCTTTTTGA+AGG + chr7.2:65577680-65577699 MS.gene041220:CDS 40.0%
! TTCTAAAAATGGGGTGCAAG+TGG + chr7.2:65577979-65577998 MS.gene041220:CDS 40.0%
! TTCTGAGAAATCCACCTTTC+TGG - chr7.2:65578742-65578761 None:intergenic 40.0%
!! CATTCCTTTTTGAAGGACCA+TGG + chr7.2:65577687-65577706 MS.gene041220:CDS 40.0%
!! TTATGCTCAAAAGGTATCGG+CGG - chr7.2:65578592-65578611 None:intergenic 40.0%
AAACCTGATGTGCTTCCTAG+TGG + chr7.2:65578622-65578641 MS.gene041220:CDS 45.0%
ACCAAGGAGTTGTTTGGGTA+AGG + chr7.2:65578813-65578832 MS.gene041220:CDS 45.0%
AGTGTAAAGGCTCTCTCACA+TGG - chr7.2:65578103-65578122 None:intergenic 45.0%
ATCACAAAATGGCCTGTGCT+TGG + chr7.2:65577587-65577606 MS.gene041220:CDS 45.0%
ATTCTCTATACTCCGTCGGA+AGG + chr7.2:65578677-65578696 MS.gene041220:CDS 45.0%
CCAACCAGAAAAACCAGGTA+AGG - chr7.2:65578417-65578436 None:intergenic 45.0%
CGGAGGACACATTGTTCATA+AGG + chr7.2:65578125-65578144 MS.gene041220:CDS 45.0%
GATACGTTGTGTAAGAGACC+AGG - chr7.2:65577620-65577639 None:intergenic 45.0%
GCTCTCTCACATGGAATTTC+AGG - chr7.2:65578094-65578113 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG - chr7.2:65578817-65578836 None:intergenic 45.0%
TGAGAGAGCCTTTACACTAG+CGG + chr7.2:65578105-65578124 MS.gene041220:CDS 45.0%
TTCTCTATACTCCGTCGGAA+GGG + chr7.2:65578678-65578697 MS.gene041220:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG + chr7.2:65578797-65578816 MS.gene041220:CDS 45.0%
! AGGTGGATTTCTCAGAAAGG+AGG + chr7.2:65578745-65578764 MS.gene041220:CDS 45.0%
! ATGTGCTTCCTAGTGGACAT+AGG + chr7.2:65578629-65578648 MS.gene041220:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG + chr7.2:65578560-65578579 MS.gene041220:CDS 45.0%
! GGTGGATTTCTCAGAAAGGA+GGG + chr7.2:65578746-65578765 MS.gene041220:CDS 45.0%
! TGCAGCTTCCACAAGAGTTT+TGG - chr7.2:65578160-65578179 None:intergenic 45.0%
! TGTGCTTCCTAGTGGACATA+GGG + chr7.2:65578630-65578649 MS.gene041220:CDS 45.0%
!! AGCACAGGCCATTTTGTGAT+TGG - chr7.2:65577587-65577606 None:intergenic 45.0%
!! CCTTACCTGGTTTTTCTGGT+TGG + chr7.2:65578414-65578433 MS.gene041220:CDS 45.0%
!! GCACCCCATTTTTAGAAGCA+TGG - chr7.2:65577976-65577995 None:intergenic 45.0%
CGCAACCAACCAGAAAAACC+AGG - chr7.2:65578422-65578441 None:intergenic 50.0%
CGGAAGGGTGGAGGAAATAT+GGG + chr7.2:65578693-65578712 MS.gene041220:CDS 50.0%
GACTCAACCCTATGTCCACT+AGG - chr7.2:65578640-65578659 None:intergenic 50.0%
GCTGGACCAAGGAGTTGTTT+GGG + chr7.2:65578808-65578827 MS.gene041220:CDS 50.0%
GGAAGGGTGGAGGAAATATG+GGG + chr7.2:65578694-65578713 MS.gene041220:CDS 50.0%
TATCGGCGGATAAAGCCTCA+AGG - chr7.2:65578578-65578597 None:intergenic 50.0%
TATTTCCTCCACCCTTCCGA+CGG - chr7.2:65578692-65578711 None:intergenic 50.0%
TCGGAAGGGTGGAGGAAATA+TGG + chr7.2:65578692-65578711 MS.gene041220:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG + chr7.2:65578807-65578826 MS.gene041220:CDS 50.0%
TGTGTCCTCCGCTAGTGTAA+AGG - chr7.2:65578116-65578135 None:intergenic 50.0%
TTGCACGTTCTTGGGATCAC+TGG - chr7.2:65577738-65577757 None:intergenic 50.0%
! TGTCCACTAGGAAGCACATC+AGG - chr7.2:65578628-65578647 None:intergenic 50.0%
CCAGGTAGCATTCCAAGCAC+AGG - chr7.2:65577602-65577621 None:intergenic 55.0%
CCTGTGCTTGGAATGCTACC+TGG + chr7.2:65577599-65577618 MS.gene041220:CDS 55.0%
CTATTAGCTCGGGCCTTACC+TGG + chr7.2:65578401-65578420 MS.gene041220:CDS 55.0%
GAGAGCCTTTACACTAGCGG+AGG + chr7.2:65578108-65578127 MS.gene041220:CDS 55.0%
TCTATACTCCGTCGGAAGGG+TGG + chr7.2:65578681-65578700 MS.gene041220:CDS 55.0%
!! CGGGCCTTACCTGGTTTTTC+TGG + chr7.2:65578410-65578429 MS.gene041220:CDS 55.0%
ATACTCCGTCGGAAGGGTGG+AGG + chr7.2:65578684-65578703 MS.gene041220:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 65577500 65578990 65577500 ID=MS.gene041220
chr7.2 mRNA 65577500 65578990 65577500 ID=MS.gene041220.t1;Parent=MS.gene041220
chr7.2 exon 65577500 65578990 65577500 ID=MS.gene041220.t1.exon1;Parent=MS.gene041220.t1
chr7.2 CDS 65577500 65578990 65577500 ID=cds.MS.gene041220.t1;Parent=MS.gene041220.t1
Gene Sequence

>MS.gene041220

ATGTATGTGTTTGGCATTGGAGAAATATTTTGGGCAGTTCTTGTTTTCGTTGCAATCCATTATTGGAGGCTCAACAGAAACACACCAATCACAAAATGGCCTGTGCTTGGAATGCTACCTGGTCTCTTACACAACGTATCCAACATTCACGGTTATGTAGACATAACTTTAAAACAAAACGGAGGAACATTCCTTTTTGAAGGACCATGGTTAACAAATATGAACATGGTTTGCACCAGTGATCCCAAGAACGTGCAACACATTACAAGCACAAGATTCGAAAACTACGGGAAAGGAAACGATTTCAGAGAGATTTTTGAAGTTCTTGGAGAAGGAATTTTTAGGTCTGATTCACACATTTGGAAGTACAACAGAAAGCTACTTCACTCAATTTTCAAGCAGGAAAATTTTCAGGTATTTATTCAAAAAACCGTTGAGAAAAAAATTTGTAACTATCTTCTTGTATTTCTTGACCATGCTTCTAAAAATGGGGTGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAACATATGTTCTGTGGTATTAGGATTTGATCCTAAATGTCTTTCTATTGATCTCCCTGAAATTCCATGTGAGAGAGCCTTTACACTAGCGGAGGACACATTGTTCATAAGGCATCTTAAGCCAAAACTCTTGTGGAAGCTGCAAAATTGGTTTCAAGTTGGTGAAGAGAAACAATTTATAAAGAATAATAAATTTATTGATGAAATGTTGTATTCAGAAATCAAAACCAAAAGAGAAATGCAAGGACAACAAAAATTTGACTTGCTAAATATCATTATGAATGAAGTAGGAGATGGAGAAAATCTAATAGATGACAAGTTTTTGAGAGATACATCAATTAATCTACTTGCAGCTGGAAGAGATACTATTAGCTCGGGCCTTACCTGGTTTTTCTGGTTGGTTGCGACGCATCCTTTGATTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGTGAACATAATTGGAAAGATTTAGGAGCAAAAGGGTTTAGCAAGTTAGTTTACCTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCGCCGATACCTTTTGAGCATAAATCTGCACAGAAACCTGATGTGCTTCCTAGTGGACATAGGGTTGAGTCAAATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTCTCAGAAAGGAGGGATAGTTCATGTTCCCTCTTACAAATTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTCTTTCTGTTGTCTTACACATGAAACATGGCTTGAAGGTTAATCTCAAAAAAAGAAGCATTTAA

Protein sequence

>MS.gene041220.t1

MYVFGIGEIFWAVLVFVAIHYWRLNRNTPITKWPVLGMLPGLLHNVSNIHGYVDITLKQNGGTFLFEGPWLTNMNMVCTSDPKNVQHITSTRFENYGKGNDFREIFEVLGEGIFRSDSHIWKYNRKLLHSIFKQENFQVFIQKTVEKKICNYLLVFLDHASKNGVQVDLQDIFQRLTFDNICSVVLGFDPKCLSIDLPEIPCERAFTLAEDTLFIRHLKPKLLWKLQNWFQVGEEKQFIKNNKFIDEMLYSEIKTKREMQGQQKFDLLNIIMNEVGDGENLIDDKFLRDTSINLLAAGRDTISSGLTWFFWLVATHPLIEAKILEEIKENLPSSEHNWKDLGAKGFSKLVYLHGALCEALRLYPPIPFEHKSAQKPDVLPSGHRVESNTMIVYSLYSVGRVEEIWGEDCLEFKPERWISQKGGIVHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSLSVVLHMKHGLKVNLKKRSI