AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43566

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43566.t1 MTR_1g035670 90.079 504 49 1 18 520 1 504 0.0 956
MS.gene43566.t1 MTR_1g036130 84.055 508 76 2 18 520 1 508 0.0 881
MS.gene43566.t1 MTR_1g035760 83.333 504 60 2 18 520 1 481 0.0 853
MS.gene43566.t1 MTR_1g035860 86.437 435 58 1 27 460 16 450 0.0 783
MS.gene43566.t1 MTR_1g036010 72.745 510 131 5 18 520 1 509 0.0 778
MS.gene43566.t1 MTR_1g035830 72.102 509 136 4 18 520 1 509 0.0 759
MS.gene43566.t1 MTR_1g035940 70.588 510 142 5 18 520 1 509 0.0 748
MS.gene43566.t1 MTR_1g035750 65.354 508 170 4 18 520 1 507 0.0 693
MS.gene43566.t1 MTR_1g035580 63.014 511 168 7 18 520 1 498 0.0 654
MS.gene43566.t1 MTR_1g035790 60.474 506 195 5 18 520 1 504 0.0 644
MS.gene43566.t1 MTR_1g036200 62.151 502 174 6 27 520 8 501 0.0 644
MS.gene43566.t1 MTR_1g036270 60.583 515 189 7 18 520 1 513 0.0 642
MS.gene43566.t1 MTR_1g069715 75.430 407 93 4 101 500 1 407 0.0 637
MS.gene43566.t1 MTR_1g050362 60.956 502 185 7 27 519 8 507 0.0 630
MS.gene43566.t1 MTR_1g035800 60.429 513 190 6 18 518 1 512 0.0 621
MS.gene43566.t1 MTR_7g033580 54.326 497 214 6 27 520 10 496 0.0 560
MS.gene43566.t1 MTR_8g088470 54.141 495 213 7 28 518 7 491 0.0 556
MS.gene43566.t1 MTR_7g033570 52.716 497 222 7 27 520 10 496 0.0 544
MS.gene43566.t1 MTR_6g004630 49.012 506 248 6 19 520 6 505 2.49e-174 501
MS.gene43566.t1 MTR_6g004670 48.185 496 249 4 27 518 14 505 5.67e-171 493
MS.gene43566.t1 MTR_6g004590 45.753 518 262 5 18 520 4 517 5.69e-166 480
MS.gene43566.t1 MTR_6g004600 46.838 506 250 5 30 520 16 517 1.34e-165 479
MS.gene43566.t1 MTR_6g004610 49.893 467 224 5 56 517 1 462 8.53e-165 476
MS.gene43566.t1 MTR_1g037560 40.984 488 261 10 50 519 66 544 1.27e-127 384
MS.gene43566.t1 MTR_4g075110 38.536 519 298 9 14 518 38 549 1.00e-126 381
MS.gene43566.t1 MTR_1g037550 39.836 487 272 7 50 519 66 548 2.54e-126 380
MS.gene43566.t1 MTR_5g070010 34.774 509 291 9 33 518 18 508 1.11e-95 300
MS.gene43566.t1 MTR_8g030590 36.327 490 284 10 48 518 30 510 2.32e-95 300
MS.gene43566.t1 MTR_8g098435 37.243 486 280 9 48 518 30 505 2.75e-95 299
MS.gene43566.t1 MTR_4g012320 59.817 219 87 1 303 520 7 225 4.28e-94 286
MS.gene43566.t1 MTR_3g463060 35.818 483 282 10 48 518 36 502 1.43e-91 289
MS.gene43566.t1 MTR_7g096340 34.497 487 284 18 47 519 38 503 5.34e-83 266
MS.gene43566.t1 MTR_1g070365 35.331 484 283 13 47 518 39 504 3.30e-82 265
MS.gene43566.t1 MTR_3g080580 32.604 503 286 13 47 519 39 518 2.20e-81 263
MS.gene43566.t1 MTR_7g029275 33.333 483 296 13 48 518 40 508 7.39e-81 261
MS.gene43566.t1 MTR_7g088330 33.465 505 305 12 30 518 19 508 3.18e-80 259
MS.gene43566.t1 MTR_1g070345 33.402 485 293 14 47 519 39 505 4.79e-80 259
MS.gene43566.t1 MTR_7g096320 33.881 487 287 17 47 519 39 504 9.07e-80 258
MS.gene43566.t1 MTR_8g035860 34.369 483 294 12 48 518 38 509 2.98e-79 257
MS.gene43566.t1 MTR_8g035810 34.369 483 295 11 48 518 38 510 6.55e-79 256
MS.gene43566.t1 MTR_8g035820 35.073 479 288 12 52 518 42 509 1.02e-78 256
MS.gene43566.t1 MTR_4g119660 30.885 531 317 15 24 519 1 516 1.22e-76 250
MS.gene43566.t1 MTR_5g019140 31.262 531 315 16 24 519 16 531 1.45e-76 251
MS.gene43566.t1 MTR_6g084040 64.130 184 46 3 18 200 1 165 2.66e-76 238
MS.gene43566.t1 MTR_4g054920 34.081 446 250 10 96 518 92 516 4.36e-75 246
MS.gene43566.t1 MTR_8g035780 33.884 484 289 13 52 519 43 511 1.58e-74 245
MS.gene43566.t1 MTR_8g035760 31.723 476 303 11 52 518 49 511 6.52e-72 238
MS.gene43566.t1 MTR_7g406990 36.364 352 212 7 50 393 49 396 8.98e-72 236
MS.gene43566.t1 MTR_8g035680 31.027 477 306 11 52 518 49 512 8.99e-71 235
MS.gene43566.t1 MTR_1g060550 33.171 410 240 7 95 491 93 481 2.14e-69 231
MS.gene43566.t1 MTR_2g086040 32.099 486 279 15 49 518 48 498 8.54e-67 224
MS.gene43566.t1 MTR_1g102220 30.833 480 303 13 52 518 43 506 5.65e-66 222
MS.gene43566.t1 MTR_1g050590 87.069 116 14 1 267 381 3 118 6.00e-64 204
MS.gene43566.t1 MTR_8g035810 33.176 425 263 10 48 461 38 452 1.39e-62 212
MS.gene43566.t1 MTR_1g040110 76.577 111 26 0 143 253 57 167 5.50e-57 187
MS.gene43566.t1 MTR_8g035680 32.861 353 220 7 175 518 21 365 1.13e-54 188
MS.gene43566.t1 MTR_1g036140 85.106 94 13 1 269 361 69 162 7.38e-46 158
MS.gene43566.t1 MTR_1g036140 80.882 68 13 0 18 85 1 68 1.57e-33 125
MS.gene43566.t1 MTR_8g035810 31.844 358 218 10 48 391 38 383 9.57e-43 157
MS.gene43566.t1 MTR_1g070370 37.255 255 139 7 186 436 5 242 8.87e-40 144
MS.gene43566.t1 MTR_1g102210 30.994 342 197 9 185 518 51 361 1.71e-37 142
MS.gene43566.t1 MTR_7g079440 25.690 471 291 19 70 518 215 648 3.77e-31 128
MS.gene43566.t1 MTR_5g009110 23.197 513 332 15 54 519 74 571 2.44e-27 116
MS.gene43566.t1 MTR_1g035660 51.327 113 39 3 178 290 21 117 2.80e-27 107
MS.gene43566.t1 MTR_3g093530 25.971 412 278 12 113 517 132 523 2.25e-26 112
MS.gene43566.t1 MTR_1g101040 23.094 459 318 14 65 515 81 512 4.08e-24 105
MS.gene43566.t1 MTR_1g062190 22.391 460 318 13 74 518 104 539 5.59e-24 105
MS.gene43566.t1 MTR_0025s0110 22.678 463 317 14 65 515 90 523 7.20e-24 105
MS.gene43566.t1 MTR_6g072490 24.138 464 307 16 65 515 79 510 1.19e-23 104
MS.gene43566.t1 MTR_7g079440 26.098 387 239 16 70 441 215 569 2.66e-23 103
MS.gene43566.t1 MTR_7g006900 23.810 399 261 13 126 513 101 467 8.49e-23 101
MS.gene43566.t1 MTR_6g017325 24.365 394 265 12 126 513 136 502 2.69e-22 100
MS.gene43566.t1 MTR_1g101050 23.094 459 318 14 65 515 77 508 3.27e-22 100
MS.gene43566.t1 MTR_0147s0030 22.484 467 317 13 68 517 92 530 8.08e-22 99.4
MS.gene43566.t1 MTR_1g085680 23.282 451 287 15 88 515 99 513 2.16e-21 97.8
MS.gene43566.t1 MTR_8g035790 46.465 99 51 2 422 519 1 98 2.79e-21 89.0
MS.gene43566.t1 MTR_2g072270 23.226 465 291 17 73 513 96 518 4.01e-21 97.1
MS.gene43566.t1 MTR_5g009110 22.811 434 283 11 127 519 1 423 9.09e-21 95.1
MS.gene43566.t1 MTR_6g008500 22.710 524 342 20 6 489 1 501 1.31e-20 95.5
MS.gene43566.t1 MTR_0181s0030 25.104 482 318 17 26 491 16 470 2.20e-20 94.7
MS.gene43566.t1 MTR_2g023680 22.198 455 291 12 88 517 101 517 2.67e-20 94.4
MS.gene43566.t1 MTR_8g042000 24.197 467 292 18 65 510 91 516 2.92e-20 94.4
MS.gene43566.t1 MTR_2g061200 25.175 429 275 14 113 517 122 528 6.29e-20 93.2
MS.gene43566.t1 MTR_8g046580 44.330 97 53 1 397 493 197 292 1.14e-19 90.1
MS.gene43566.t1 MTR_2g010250 32.727 220 142 5 304 518 287 505 2.32e-19 91.7
MS.gene43566.t1 MTR_5g009110 23.622 381 244 11 54 408 74 433 1.15e-18 89.0
MS.gene43566.t1 MTR_6g008430 25.926 297 195 9 215 497 207 492 1.62e-18 89.0
MS.gene43566.t1 MTR_6g008650 23.471 507 331 18 32 505 25 507 1.87e-18 89.0
MS.gene43566.t1 MTR_8g098565 30.180 222 147 5 304 518 286 506 2.87e-18 88.2
MS.gene43566.t1 MTR_7g055793 21.903 452 315 12 76 517 100 523 3.30e-18 88.2
MS.gene43566.t1 MTR_7g055793 21.903 452 315 12 76 517 45 468 3.37e-18 87.8
MS.gene43566.t1 MTR_8g012585 27.092 251 162 7 256 497 188 426 3.99e-18 87.4
MS.gene43566.t1 MTR_2g072400 21.353 473 319 15 62 517 79 515 6.66e-18 87.0
MS.gene43566.t1 MTR_2g010320 25.141 354 249 10 174 518 157 503 8.00e-18 86.7
MS.gene43566.t1 MTR_8g008530 22.269 476 310 15 64 517 81 518 1.08e-17 86.3
MS.gene43566.t1 MTR_2g010290 31.364 220 145 5 304 518 314 532 1.11e-17 86.3
MS.gene43566.t1 MTR_6g008530 25.820 244 168 6 254 489 257 495 1.48e-17 85.9
MS.gene43566.t1 MTR_6g008640 24.025 487 311 18 51 505 46 505 1.94e-17 85.5
MS.gene43566.t1 MTR_1g022040 21.709 433 305 13 87 513 94 498 2.39e-17 85.1
MS.gene43566.t1 MTR_2g061750 29.500 200 105 7 87 264 9 194 2.78e-17 80.9
MS.gene43566.t1 MTR_2g062670 27.451 255 139 7 118 363 18 235 3.02e-17 84.7
MS.gene43566.t1 MTR_2g062670 30.168 179 76 4 185 363 283 412 1.19e-14 76.6
MS.gene43566.t1 MTR_2g061740 29.688 192 101 6 95 264 15 194 3.96e-17 80.5
MS.gene43566.t1 MTR_8g042020 25.000 288 175 10 251 517 255 522 4.09e-17 84.7
MS.gene43566.t1 MTR_1g015860 21.825 559 350 21 10 519 9 529 4.55e-17 84.3
MS.gene43566.t1 MTR_2g010330 30.357 224 142 6 304 518 289 507 6.72e-17 84.0
MS.gene43566.t1 MTR_8g042060 21.729 451 298 15 88 517 107 523 7.31e-17 84.0
MS.gene43566.t1 MTR_6g042540 20.722 526 344 15 11 497 1 492 7.78e-17 83.6
MS.gene43566.t1 MTR_2g072340 20.705 454 320 13 76 517 90 515 9.81e-17 83.6
MS.gene43566.t1 MTR_2g010280 31.364 220 145 5 304 518 285 503 1.39e-16 82.8
MS.gene43566.t1 MTR_4g088400 26.693 251 176 6 249 497 250 494 1.61e-16 82.8
MS.gene43566.t1 MTR_2g010380 27.881 269 182 8 258 518 245 509 2.00e-16 82.4
MS.gene43566.t1 MTR_4g104660 22.766 470 303 16 48 493 50 483 3.04e-16 82.0
MS.gene43566.t1 MTR_4g088425 27.490 251 175 5 249 497 233 478 4.22e-16 81.3
MS.gene43566.t1 MTR_4g104610 21.605 486 341 17 20 488 4 466 4.47e-16 81.3
MS.gene43566.t1 MTR_8g042060 24.567 289 186 9 244 517 216 487 5.66e-16 80.9
MS.gene43566.t1 MTR_4g113650 21.888 466 321 13 60 513 80 514 6.77e-16 80.9
MS.gene43566.t1 MTR_0171s0020 27.344 256 172 7 244 491 227 476 7.12e-16 80.9
MS.gene43566.t1 MTR_4g071710 27.820 266 164 8 250 494 226 484 9.02e-16 80.5
MS.gene43566.t1 MTR_6g042610 24.125 257 183 6 249 497 241 493 1.54e-15 79.7
MS.gene43566.t1 MTR_2g055430 19.101 445 317 12 88 517 101 517 1.66e-15 79.7
MS.gene43566.t1 MTR_3g104560 26.545 275 173 9 258 519 144 402 3.11e-15 78.2
MS.gene43566.t1 MTR_5g070920 25.703 249 170 6 250 488 225 468 3.42e-15 78.6
MS.gene43566.t1 MTR_4g089055 24.806 387 256 14 121 494 122 486 3.78e-15 78.6
MS.gene43566.t1 MTR_8g104030 29.508 244 149 9 254 484 8 241 3.97e-15 76.3
MS.gene43566.t1 MTR_2g055470 19.551 445 315 12 88 517 101 517 3.98e-15 78.6
MS.gene43566.t1 MTR_4g088420 30.769 182 120 4 317 497 30 206 4.45e-15 75.1
MS.gene43566.t1 MTR_5g070690 27.935 247 156 6 254 488 231 467 5.28e-15 77.8
MS.gene43566.t1 MTR_5g070800 27.935 247 156 6 254 488 231 467 5.28e-15 77.8
MS.gene43566.t1 MTR_5g095230 21.075 465 317 17 70 517 82 513 8.06e-15 77.4
MS.gene43566.t1 MTR_3g104560 26.545 275 173 9 258 519 279 537 8.56e-15 77.4
MS.gene43566.t1 MTR_2g072380 22.609 345 235 9 184 517 27 350 9.31e-15 76.3
MS.gene43566.t1 MTR_7g103450 26.357 258 162 6 241 487 241 481 1.62e-14 76.6
MS.gene43566.t1 MTR_7g098550 22.907 454 281 15 78 513 90 492 2.98e-14 75.5
MS.gene43566.t1 MTR_5g034900 25.871 201 144 4 321 518 319 517 4.08e-14 75.1
MS.gene43566.t1 MTR_0022s0290 24.176 364 249 13 137 487 131 480 6.18e-14 74.7
MS.gene43566.t1 MTR_6g084770 26.000 250 158 9 254 488 233 470 6.94e-14 74.3
MS.gene43566.t1 MTR_2g010300 28.889 225 132 7 304 519 285 490 6.98e-14 74.3
MS.gene43566.t1 MTR_7g098550 23.451 452 289 15 78 513 90 500 7.05e-14 74.3
MS.gene43566.t1 MTR_7g075610 23.944 497 311 22 28 494 15 474 7.18e-14 74.3
MS.gene43566.t1 MTR_8g469300 24.118 340 209 14 172 488 159 472 9.63e-14 73.9
MS.gene43566.t1 MTR_2g450040 20.849 518 345 21 23 505 11 498 1.38e-13 73.6
MS.gene43566.t1 MTR_4g095050 25.602 332 216 11 183 501 171 484 1.39e-13 73.6
MS.gene43566.t1 MTR_5g094550 25.385 260 167 8 246 494 228 471 1.84e-13 73.2
MS.gene43566.t1 MTR_1g492820 21.748 492 339 17 48 518 49 515 2.61e-13 72.8
MS.gene43566.t1 MTR_2g065360 22.764 369 242 13 139 491 99 440 2.91e-13 72.4
MS.gene43566.t1 MTR_7g056103 23.444 482 294 21 48 494 38 479 4.00e-13 72.0
MS.gene43566.t1 MTR_3g025260 24.199 281 193 10 222 494 209 477 4.31e-13 72.0
MS.gene43566.t1 MTR_8g076290 23.188 345 229 13 139 468 127 450 5.12e-13 71.6
MS.gene43566.t1 MTR_1g069200 24.299 214 155 3 303 516 304 510 6.08e-13 71.6
MS.gene43566.t1 MTR_1g103670 22.590 363 246 13 136 487 123 461 8.17e-13 70.9
MS.gene43566.t1 MTR_8g104100 29.032 186 118 5 310 491 54 229 9.11e-13 68.9
MS.gene43566.t1 MTR_5g070830 24.706 255 164 8 250 487 335 578 9.25e-13 71.2
MS.gene43566.t1 MTR_5g070840 29.371 143 96 2 348 488 1 140 9.45e-13 67.0
MS.gene43566.t1 MTR_4g088405 32.124 193 125 4 306 497 221 408 1.04e-12 70.5
MS.gene43566.t1 MTR_0059s0170 25.316 474 286 23 48 494 41 473 1.40e-12 70.5
MS.gene43566.t1 MTR_2g437840 27.615 239 154 8 256 492 241 462 1.76e-12 70.1
MS.gene43566.t1 MTR_1g091010 25.461 271 164 10 227 491 224 462 1.81e-12 70.1
MS.gene43566.t1 MTR_3g058220 22.270 467 309 19 48 494 40 472 2.41e-12 69.7
MS.gene43566.t1 MTR_5g009110 23.179 302 195 7 127 408 1 285 2.52e-12 68.2
MS.gene43566.t1 MTR_5g018500 26.543 162 112 4 330 489 4 160 2.60e-12 66.2
MS.gene43566.t1 MTR_1g107295 25.701 214 139 7 290 494 283 485 2.61e-12 69.7
MS.gene43566.t1 MTR_1g031700 21.389 360 254 11 136 487 123 461 2.71e-12 69.3
MS.gene43566.t1 MTR_5g070700 24.549 277 186 9 250 513 225 491 3.31e-12 69.3
MS.gene43566.t1 MTR_7g012330 22.246 463 314 17 48 494 38 470 3.50e-12 68.9
MS.gene43566.t1 MTR_3g025230 23.262 374 249 16 139 494 124 477 4.55e-12 68.9
MS.gene43566.t1 MTR_6g084060 71.429 35 10 0 76 110 19 53 5.61e-12 61.2
MS.gene43566.t1 MTR_4g109470 26.667 255 146 10 249 483 230 463 5.85e-12 68.6
MS.gene43566.t1 MTR_6g004570 37.143 105 52 4 259 349 1 105 6.61e-12 66.2
MS.gene43566.t1 MTR_5g007460 23.832 214 154 5 279 491 239 444 8.33e-12 67.8
MS.gene43566.t1 MTR_5g070710 23.140 242 170 5 250 481 224 459 9.13e-12 67.8
MS.gene43566.t1 MTR_4g088160 21.390 374 246 13 139 491 128 474 1.05e-11 67.8
MS.gene43566.t1 MTR_3g076560 23.026 304 212 9 185 484 191 476 1.73e-11 67.0
MS.gene43566.t1 MTR_1g035140 26.217 267 166 11 244 494 220 471 1.88e-11 66.6
MS.gene43566.t1 MTR_5g016440 24.148 352 224 15 183 520 167 489 2.10e-11 66.6
MS.gene43566.t1 MTR_4g088195 21.429 378 249 12 139 495 128 478 2.46e-11 66.6
MS.gene43566.t1 MTR_1g107300 25.556 180 126 5 318 495 1 174 2.46e-11 63.9
MS.gene43566.t1 MTR_5g045250 22.525 404 284 16 92 487 102 484 2.54e-11 66.2
MS.gene43566.t1 MTR_8g468780 25.296 253 154 10 254 488 168 403 2.55e-11 66.2
MS.gene43566.t1 MTR_5g007450 24.878 205 146 5 291 494 271 468 3.93e-11 65.9
MS.gene43566.t1 MTR_4g062500 25.000 256 172 10 254 495 235 484 5.04e-11 65.5
MS.gene43566.t1 MTR_0638s0020 22.754 334 216 13 174 491 90 397 5.79e-11 65.1
MS.gene43566.t1 MTR_6g084090 67.500 40 12 1 299 337 11 50 5.83e-11 58.2
MS.gene43566.t1 MTR_1g037370 28.022 182 116 6 292 468 268 439 8.36e-11 64.7
MS.gene43566.t1 MTR_5g070850 22.311 251 171 6 254 491 233 472 9.16e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43566.t1 AT4G32170 43.640 511 272 6 18 519 1 504 6.43e-150 439
MS.gene43566.t1 AT4G39500 42.495 513 276 5 19 519 12 517 2.66e-147 432
MS.gene43566.t1 AT2G23180 40.504 516 288 5 18 518 1 512 8.75e-142 419
MS.gene43566.t1 AT4G39490 41.096 511 280 6 28 520 11 518 1.47e-141 418
MS.gene43566.t1 AT4G39500 43.038 474 253 4 56 519 1 467 9.12e-140 412
MS.gene43566.t1 AT2G21910 41.770 486 267 6 45 520 29 508 4.67e-137 406
MS.gene43566.t1 AT1G57750 38.627 510 292 5 18 519 1 497 6.30e-133 395
MS.gene43566.t1 AT4G39480 40.891 516 288 5 18 520 4 515 1.85e-132 395
MS.gene43566.t1 AT1G47620 38.697 522 294 6 18 519 1 516 1.39e-131 392
MS.gene43566.t1 AT4G39510 39.494 514 291 7 18 519 1 506 1.73e-128 384
MS.gene43566.t1 AT5G08250 37.476 515 298 10 21 520 37 542 1.06e-121 368
MS.gene43566.t1 AT5G52320 39.121 478 271 6 49 517 35 501 1.30e-120 363
MS.gene43566.t1 AT5G02900 39.382 518 260 12 18 519 1 480 1.57e-119 360
MS.gene43566.t1 AT5G23190 36.452 513 307 8 21 520 36 542 7.44e-119 361
MS.gene43566.t1 AT5G52320 38.901 473 269 6 49 512 35 496 1.00e-118 358
MS.gene43566.t1 AT1G65340 37.736 477 278 5 50 517 36 502 4.41e-118 357
MS.gene43566.t1 AT5G08250 38.144 485 277 9 51 520 4 480 1.74e-116 353
MS.gene43566.t1 AT1G24540 37.137 482 288 6 48 518 43 520 1.41e-112 344
MS.gene43566.t1 AT1G63710 37.008 508 300 10 25 518 6 507 5.69e-104 322
MS.gene43566.t1 AT2G45970 36.992 492 278 10 48 518 30 510 1.98e-103 321
MS.gene43566.t1 AT4G00360 36.399 511 298 10 27 518 9 511 1.36e-101 317
MS.gene43566.t1 AT3G26125 34.608 497 293 9 48 520 46 534 6.03e-101 314
MS.gene43566.t1 AT1G57750 36.156 437 258 5 18 446 1 424 3.01e-100 309
MS.gene43566.t1 AT1G01600 35.742 512 302 10 27 518 9 513 3.90e-99 310
MS.gene43566.t1 AT1G13140 32.046 518 322 9 23 520 19 526 1.42e-93 295
MS.gene43566.t1 AT1G13150 33.676 487 303 7 48 520 39 519 1.41e-92 292
MS.gene43566.t1 AT5G58860 34.314 510 308 8 25 518 10 508 4.43e-92 290
MS.gene43566.t1 AT1G13140 31.299 508 313 9 23 520 19 500 4.79e-88 280
MS.gene43566.t1 AT1G34540 33.658 514 301 14 28 518 1 497 1.00e-86 276
MS.gene43566.t1 AT3G56630 34.286 490 297 12 40 518 23 498 6.80e-85 271
MS.gene43566.t1 AT2G45510 34.252 508 303 13 16 511 13 501 4.49e-83 267
MS.gene43566.t1 AT2G44890 33.659 511 310 12 16 511 5 501 7.99e-81 261
MS.gene43566.t1 AT5G63450 31.944 504 319 10 24 518 14 502 2.53e-80 260
MS.gene43566.t1 AT5G63450 30.930 527 340 10 1 518 49 560 9.65e-80 260
MS.gene43566.t1 AT3G48520 31.953 507 312 11 27 519 13 500 1.55e-79 258
MS.gene43566.t1 AT2G27690 34.118 425 261 9 95 516 76 484 6.41e-77 250
MS.gene43566.t1 AT2G44890 32.809 509 299 12 16 511 5 483 3.84e-76 248
MS.gene43566.t1 AT3G01900 32.582 488 285 16 47 518 31 490 3.87e-75 246
MS.gene43566.t1 AT1G69500 29.740 538 328 11 18 519 1 524 4.44e-73 241
MS.gene43566.t1 AT1G31800 25.625 480 304 18 61 519 123 570 4.82e-31 127
MS.gene43566.t1 AT3G53130 23.644 461 311 16 74 518 104 539 9.92e-28 117
MS.gene43566.t1 AT5G24900 22.532 466 322 13 68 515 80 524 5.47e-23 102
MS.gene43566.t1 AT2G26710 24.837 459 311 16 60 513 81 510 1.84e-22 101
MS.gene43566.t1 AT5G24900 22.717 427 295 12 103 515 2 407 3.60e-22 99.4
MS.gene43566.t1 AT1G66030 29.586 169 103 3 18 177 1 162 8.49e-22 92.8
MS.gene43566.t1 AT3G14680 22.757 457 307 15 74 517 88 511 2.47e-21 97.8
MS.gene43566.t1 AT4G15110 22.428 486 319 14 77 519 109 579 4.81e-21 97.1
MS.gene43566.t1 AT3G14640 22.294 462 305 15 74 517 110 535 6.57e-21 96.7
MS.gene43566.t1 AT3G14640 22.294 462 305 15 74 517 88 513 7.06e-21 96.3
MS.gene43566.t1 AT3G14650 22.717 449 311 15 70 510 84 504 1.21e-20 95.5
MS.gene43566.t1 AT5G52400 23.776 429 298 12 88 511 108 512 5.88e-20 93.6
MS.gene43566.t1 AT5G24910 22.965 479 310 20 65 518 88 532 9.93e-20 92.8
MS.gene43566.t1 AT3G14660 23.226 465 303 17 70 517 84 511 6.34e-19 90.1
MS.gene43566.t1 AT4G27710 23.230 452 306 13 74 513 90 512 7.96e-19 90.1
MS.gene43566.t1 AT2G45580 27.326 344 225 12 161 494 151 479 1.15e-18 89.4
MS.gene43566.t1 AT3G14690 22.247 445 301 15 87 517 133 546 1.32e-18 89.4
MS.gene43566.t1 AT3G14690 22.368 456 306 16 76 517 90 511 1.34e-18 89.4
MS.gene43566.t1 AT2G45580 27.941 340 219 13 165 494 2 325 1.46e-18 87.8
MS.gene43566.t1 AT2G24180 26.727 333 224 11 185 511 173 491 2.07e-18 88.6
MS.gene43566.t1 AT4G13770 21.561 487 352 13 19 494 3 470 1.15e-17 86.3
MS.gene43566.t1 AT3G25180 25.862 290 182 8 218 497 217 483 1.26e-17 86.3
MS.gene43566.t1 AT5G38450 22.366 465 313 13 68 513 76 511 1.83e-17 85.9
MS.gene43566.t1 AT4G13310 23.140 363 242 14 139 488 124 462 2.24e-17 85.5
MS.gene43566.t1 AT3G26830 26.214 309 208 9 183 484 163 458 3.18e-17 84.7
MS.gene43566.t1 AT4G13290 24.518 363 229 14 139 488 125 455 3.44e-17 84.7
MS.gene43566.t1 AT3G14610 22.523 444 311 14 74 510 87 504 3.96e-17 84.7
MS.gene43566.t1 AT3G61040 30.332 211 138 6 280 487 256 460 4.02e-17 84.7
MS.gene43566.t1 AT5G51900 36.306 157 77 6 235 372 1 153 5.15e-17 81.3
MS.gene43566.t1 AT3G14630 22.103 466 307 15 70 517 80 507 6.61e-17 84.0
MS.gene43566.t1 AT4G31950 25.581 258 176 8 250 497 231 482 8.59e-17 83.6
MS.gene43566.t1 AT5G57260 26.260 377 236 16 139 497 122 474 9.01e-17 83.6
MS.gene43566.t1 AT3G14630 22.222 459 301 15 70 510 135 555 1.17e-16 83.6
MS.gene43566.t1 AT1G64940 26.000 250 170 6 280 518 263 508 1.36e-16 82.8
MS.gene43566.t1 AT4G31940 25.397 252 175 5 254 497 248 494 1.95e-16 82.4
MS.gene43566.t1 AT1G64950 26.394 269 175 6 253 518 259 507 2.19e-16 82.4
MS.gene43566.t1 AT3G48270 22.051 390 245 12 106 487 114 452 2.46e-16 82.0
MS.gene43566.t1 AT5G35715 25.373 335 221 10 156 478 74 391 3.40e-16 81.3
MS.gene43566.t1 AT4G39950 20.565 496 363 15 16 493 22 504 8.78e-16 80.5
MS.gene43566.t1 AT4G39950 20.523 497 364 15 16 494 62 545 1.10e-15 80.5
MS.gene43566.t1 AT3G48300 23.284 335 230 10 185 513 164 477 1.30e-15 79.7
MS.gene43566.t1 AT3G48300 23.284 335 230 10 185 513 166 479 1.31e-15 79.7
MS.gene43566.t1 AT3G03470 29.694 229 150 6 299 518 283 509 1.42e-15 79.7
MS.gene43566.t1 AT3G14660 25.092 271 178 8 257 517 110 365 2.41e-15 78.2
MS.gene43566.t1 AT5G24950 21.868 471 305 18 43 488 29 461 2.52e-15 79.0
MS.gene43566.t1 AT5G06900 24.031 258 176 6 240 491 222 465 3.52e-15 78.6
MS.gene43566.t1 AT4G31970 25.692 253 173 8 254 497 247 493 9.72e-15 77.4
MS.gene43566.t1 AT2G46960 22.560 461 300 15 74 513 88 512 1.08e-14 77.0
MS.gene43566.t1 AT3G32047 23.457 405 247 13 78 474 110 459 3.29e-14 75.5
MS.gene43566.t1 AT4G15350 27.572 243 152 9 290 520 274 504 3.32e-14 75.5
MS.gene43566.t1 AT1G64930 27.184 206 141 6 319 519 309 510 3.74e-14 75.5
MS.gene43566.t1 AT1G33720 26.437 348 215 14 163 494 24 346 3.81e-14 74.7
MS.gene43566.t1 AT1G33720 26.437 348 215 14 163 494 24 346 3.81e-14 74.7
MS.gene43566.t1 AT1G33720 26.437 348 215 14 163 494 24 346 3.81e-14 74.7
MS.gene43566.t1 AT1G33720 26.437 348 215 14 163 494 156 478 4.09e-14 75.1
MS.gene43566.t1 AT2G12190 25.468 267 174 7 252 513 258 504 4.52e-14 75.1
MS.gene43566.t1 AT2G46950 20.594 471 316 13 66 513 130 565 4.57e-14 75.1
MS.gene43566.t1 AT4G20240 24.574 411 258 17 48 440 37 413 4.81e-14 74.7
MS.gene43566.t1 AT1G50560 23.824 340 229 13 185 512 184 505 5.16e-14 75.1
MS.gene43566.t1 AT5G05260 23.011 465 313 17 48 487 44 488 5.97e-14 74.7
MS.gene43566.t1 AT2G30770 24.664 223 160 3 276 494 249 467 7.65e-14 74.3
MS.gene43566.t1 AT1G13090 24.585 301 207 10 175 468 155 442 1.07e-13 73.9
MS.gene43566.t1 AT2G46960 26.749 243 164 7 276 513 163 396 1.16e-13 73.2
MS.gene43566.t1 AT1G01190 27.542 236 155 8 292 518 308 536 1.43e-13 73.6
MS.gene43566.t1 AT1G01190 27.542 236 155 8 292 518 303 531 1.59e-13 73.6
MS.gene43566.t1 AT1G74110 21.239 565 364 20 3 518 4 536 1.72e-13 73.2
MS.gene43566.t1 AT1G64900 27.381 252 167 7 280 519 258 505 1.96e-13 73.2
MS.gene43566.t1 AT2G27000 24.444 270 177 9 263 520 254 508 2.24e-13 72.8
MS.gene43566.t1 AT3G26160 25.000 232 150 7 247 468 229 446 2.40e-13 72.8
MS.gene43566.t1 AT2G14100 25.418 299 196 12 185 474 181 461 2.43e-13 72.8
MS.gene43566.t1 AT5G47990 23.988 346 221 13 185 512 180 501 4.13e-13 72.0
MS.gene43566.t1 AT3G26320 24.661 369 242 17 139 494 123 468 4.16e-13 72.0
MS.gene43566.t1 AT4G12310 22.642 265 193 5 254 511 246 505 5.63e-13 71.6
MS.gene43566.t1 AT2G45550 24.854 342 228 10 163 494 156 478 6.58e-13 71.6
MS.gene43566.t1 AT1G67110 23.515 404 265 15 121 513 135 505 7.79e-13 71.2
MS.gene43566.t1 AT3G48280 20.802 399 260 11 102 493 109 458 1.13e-12 70.5
MS.gene43566.t1 AT5G04330 24.609 256 167 7 254 494 231 475 1.32e-12 70.5
MS.gene43566.t1 AT4G37400 23.099 342 244 8 180 519 162 486 1.54e-12 70.1
MS.gene43566.t1 AT3G20100 27.948 229 129 9 256 474 260 462 2.04e-12 70.1
MS.gene43566.t1 AT2G46660 24.893 233 164 6 292 518 301 528 2.47e-12 69.7
MS.gene43566.t1 AT4G12300 20.507 473 342 14 48 508 46 496 2.74e-12 69.3
MS.gene43566.t1 AT3G48310 20.918 392 273 13 111 493 96 459 3.46e-12 68.9
MS.gene43566.t1 AT4G37340 27.197 239 159 8 250 488 233 456 4.61e-12 68.9
MS.gene43566.t1 AT3G20120 27.273 220 137 8 267 474 253 461 5.14e-12 68.6
MS.gene43566.t1 AT3G20120 27.273 220 137 8 267 474 117 325 5.34e-12 68.2
MS.gene43566.t1 AT3G20120 27.273 220 137 8 267 474 117 325 5.34e-12 68.2
MS.gene43566.t1 AT3G20120 27.273 220 137 8 267 474 117 325 5.34e-12 68.2
MS.gene43566.t1 AT4G12320 22.264 265 194 5 254 511 244 503 5.41e-12 68.6
MS.gene43566.t1 AT2G25160 27.407 270 176 10 204 466 202 458 6.86e-12 68.2
MS.gene43566.t1 AT4G37370 27.511 229 151 7 256 484 238 451 7.56e-12 68.2
MS.gene43566.t1 AT1G16410 21.398 472 321 18 48 491 49 498 1.18e-11 67.4
MS.gene43566.t1 AT3G20110 21.795 312 220 7 185 491 177 469 1.32e-11 67.4
MS.gene43566.t1 AT5G25180 21.546 427 284 15 89 494 68 464 1.45e-11 67.0
MS.gene43566.t1 AT1G13110 20.787 356 257 10 139 484 124 464 2.04e-11 66.6
MS.gene43566.t1 AT4G15380 24.809 262 172 8 263 513 252 499 2.16e-11 66.6
MS.gene43566.t1 AT2G45560 26.106 226 142 7 280 494 267 478 2.62e-11 66.2
MS.gene43566.t1 AT1G50520 23.821 424 256 18 107 512 130 504 4.22e-11 65.9
MS.gene43566.t1 AT3G20950 21.386 332 217 10 155 476 171 468 5.10e-11 65.5
MS.gene43566.t1 AT1G79370 20.281 498 352 15 17 487 19 498 5.22e-11 65.5
MS.gene43566.t1 AT3G20130 25.681 257 166 10 270 513 231 475 5.84e-11 65.1
MS.gene43566.t1 AT3G20130 25.681 257 166 10 270 513 259 503 6.01e-11 65.1
MS.gene43566.t1 AT1G33720 25.000 372 215 15 163 494 24 371 6.50e-11 64.7
MS.gene43566.t1 AT3G10560 23.868 243 174 5 282 519 277 513 7.60e-11 65.1
MS.gene43566.t1 AT5G10610 25.283 265 182 10 249 510 229 480 8.15e-11 64.7
MS.gene43566.t1 AT5G67310 25.000 236 161 6 254 487 245 466 8.26e-11 64.7
MS.gene43566.t1 AT3G26270 26.295 251 160 7 254 493 236 472 8.31e-11 64.7
MS.gene43566.t1 AT1G28430 25.540 278 182 9 256 520 244 509 9.17e-11 64.7
MS.gene43566.t1 AT2G27010 24.664 223 148 6 274 487 240 451 9.59e-11 64.7
MS.gene43566.t1 AT4G37330 27.232 224 147 8 249 472 230 437 9.82e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTCTTGAATGATTT+TGG 0.145864 1.2:+21123587 None:intergenic
TCCATGATGTTTCATGAAAA+AGG 0.177494 1.2:+21124406 None:intergenic
CACATTGCAAGCAAGAATTT+TGG 0.184244 1.2:-21124308 MS.gene43566:CDS
CCAATTATTGGCCAATTAAT+TGG 0.193507 1.2:+21124479 None:intergenic
TCACATGAAACATGGTTTAA+AGG 0.200981 1.2:-21123106 MS.gene43566:CDS
ATGAATTTGTACCAATTAAT+TGG 0.203126 1.2:-21124490 MS.gene43566:CDS
CCAATTAATTGGCCAATAAT+TGG 0.220322 1.2:-21124479 MS.gene43566:CDS
GAGTATAATAACCTTGTATT+TGG 0.237092 1.2:+21123390 None:intergenic
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.2:-21123356 MS.gene43566:CDS
GGTTACATAATCATGGAAAT+TGG 0.258555 1.2:+21124427 None:intergenic
AAAGAAAGCTTCGGGGTTAC+AGG 0.270723 1.2:+21123135 None:intergenic
TTCAAGAAATCAAAGATAAC+TGG 0.280108 1.2:-21123578 MS.gene43566:CDS
CTTAGCTCATTAAACTTGTT+TGG 0.294588 1.2:+21123987 None:intergenic
ACCACCTTTATGTGAAATTT+CGG 0.304852 1.2:+21123168 None:intergenic
TAGCTTCATTCAAATGAAAA+TGG 0.313468 1.2:-21123208 MS.gene43566:CDS
GCCGGTAGCATACCAATTAT+TGG 0.316662 1.2:+21124467 None:intergenic
AACTTGTTTGGAAGGCAATT+AGG 0.324390 1.2:+21123999 None:intergenic
AGCATCTGCACTATTACATT+TGG 0.331822 1.2:-21124029 MS.gene43566:CDS
GTTACCGAAATTTCACATAA+AGG 0.334159 1.2:-21123172 MS.gene43566:CDS
GCACTTGCTTTGCTCTTGCT+TGG 0.351078 1.2:+21123791 None:intergenic
TCCTTACCCATACAACTTCT+AGG 0.358842 1.2:+21123234 None:intergenic
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.2:-21123908 MS.gene43566:CDS
GCAATGTGATCAACATTCAT+TGG 0.373065 1.2:+21124323 None:intergenic
AAGTTCATTGCTTTCAATAC+AGG 0.381728 1.2:-21123258 MS.gene43566:CDS
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.2:-21123355 MS.gene43566:CDS
CTCTATTGCGTCTCCAATAG+TGG 0.386849 1.2:+21124513 None:intergenic
TCTTCCTATACATCCACTAT+TGG 0.389329 1.2:-21124526 MS.gene43566:CDS
GGAAATGGCCCGGTTACTTC+AGG 0.390271 1.2:-21123657 MS.gene43566:CDS
GTGCAGCAGCAGTGAAGATA+TGG 0.395612 1.2:-21123772 MS.gene43566:CDS
ATTATCACCTCATCTATAAC+AGG 0.399453 1.2:+21123939 None:intergenic
ATTATACTCTTTGTACGCTA+TGG 0.402063 1.2:-21123376 MS.gene43566:CDS
TACAGGACCTAGAAGTTGTA+TGG 0.412532 1.2:-21123241 MS.gene43566:CDS
TGTTTCATTCATTTCTCAAA+AGG 0.413955 1.2:-21124187 MS.gene43566:CDS
GAAGAACAAAAGAAAGCTTC+GGG 0.416262 1.2:+21123127 None:intergenic
TTGTTTCCATACGTGCGAAT+TGG 0.418938 1.2:+21124220 None:intergenic
GGAGGAACGTTTCGATTTGA+AGG 0.423047 1.2:-21124386 MS.gene43566:CDS
TAGATGAGGTGATAATTTAC+CGG 0.429693 1.2:-21123932 MS.gene43566:CDS
CTCTCCACTAGGTAGTATAT+CGG 0.434770 1.2:+21123422 None:intergenic
AGTGGATGTATAGGAAGATT+AGG 0.434953 1.2:+21124531 None:intergenic
TGAAGAACAAAAGAAAGCTT+CGG 0.442959 1.2:+21123126 None:intergenic
CAACTGAGACCTGAAGTAAC+CGG 0.449990 1.2:+21123648 None:intergenic
ATGTCAATAATTCAGTGTAT+AGG 0.451360 1.2:-21124569 MS.gene43566:CDS
ATTGCACATATATGCTCAAA+AGG 0.452980 1.2:+21123450 None:intergenic
CATCATTAAGAAATGGTAGT+AGG 0.456196 1.2:+21124111 None:intergenic
CGGTTACTTCAGGTCTCAGT+TGG 0.460067 1.2:-21123647 MS.gene43566:CDS
TAAATTCCAATTCGCACGTA+TGG 0.464729 1.2:-21124226 MS.gene43566:CDS
GCTCATTAAACTTGTTTGGA+AGG 0.466990 1.2:+21123991 None:intergenic
CTTAATGATGTATGTGAAGT+AGG 0.468376 1.2:-21124098 MS.gene43566:CDS
AACAAATATGGGGAGAAGAC+TGG 0.470442 1.2:-21123344 MS.gene43566:CDS
GCACTAATGAAGGAAGGATC+TGG 0.472945 1.2:-21123735 MS.gene43566:CDS
TCACATACATCATTAAGAAA+TGG 0.474421 1.2:+21124104 None:intergenic
ATGAAGGAAGGATCTGGAAA+GGG 0.476745 1.2:-21123729 MS.gene43566:CDS
CGTTTCGATTTGAAGGAGCT+TGG 0.477973 1.2:-21124379 MS.gene43566:CDS
ATCAACATTCATTGGATCAC+TGG 0.484285 1.2:+21124331 None:intergenic
ACCTAGAAGTTGTATGGGTA+AGG 0.489801 1.2:-21123235 MS.gene43566:CDS
GGCTCAACGTTGGTCAAGAA+AGG 0.490371 1.2:-21123872 MS.gene43566:CDS
AGTAGGTGCTCAGGTGGACC+TGG 0.498248 1.2:-21124081 MS.gene43566:CDS
GCCAATAATTGGTATGCTAC+CGG 0.499291 1.2:-21124468 MS.gene43566:CDS
TTATACTCTTTGTACGCTAT+GGG 0.500848 1.2:-21123375 MS.gene43566:CDS
TTGTTGGAAGAAGTTCTTGA+AGG 0.506172 1.2:+21124160 None:intergenic
GTCTCCAATAGTGGATGTAT+AGG 0.515307 1.2:+21124522 None:intergenic
GGAATTTAAGCCTGAGAGAT+GGG 0.521133 1.2:-21123319 MS.gene43566:CDS
CTTCCTAAAAGCACTAATGA+AGG 0.524091 1.2:-21123745 MS.gene43566:CDS
CTTTCCGATACCCATCTCTC+AGG 0.530509 1.2:+21123309 None:intergenic
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.2:-21123613 MS.gene43566:CDS
CATATATGCTCAAAAGGTAC+AGG 0.535622 1.2:+21123456 None:intergenic
GAAATTTCACATAAAGGTGG+TGG 0.536525 1.2:-21123166 MS.gene43566:CDS
TGGAATTTAAGCCTGAGAGA+TGG 0.543751 1.2:-21123320 MS.gene43566:CDS
TCAATAATTCAGTGTATAGG+AGG 0.548247 1.2:-21124566 MS.gene43566:CDS
TTGGTCAAGAAAGGAAGCTA+AGG 0.548302 1.2:-21123863 MS.gene43566:CDS
ACCTACTCAAGGCATCCTCC+AGG 0.551378 1.2:+21124063 None:intergenic
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.2:+21123913 None:intergenic
AAAGCAATGAACTTGTAAGA+TGG 0.552050 1.2:+21123267 None:intergenic
GAGAGATGGGTATCGGAAAG+AGG 0.557232 1.2:-21123306 MS.gene43566:CDS
AAGAAAGCTTCGGGGTTACA+GGG 0.558470 1.2:+21123136 None:intergenic
TAAGCCTGAGAGATGGGTAT+CGG 0.564864 1.2:-21123313 MS.gene43566:CDS
CTAAAAGCACTAATGAAGGA+AGG 0.565136 1.2:-21123741 MS.gene43566:CDS
ATCTCTTCCTGTTATAGATG+AGG 0.572397 1.2:-21123946 MS.gene43566:CDS
GATAGATTACGCAAAAGCGC+CGG 0.572908 1.2:+21124449 None:intergenic
AATATGGGGAGAAGACTGGC+TGG 0.578615 1.2:-21123340 MS.gene43566:CDS
GATGTATAGGAAGATTAGGA+TGG 0.580348 1.2:+21124535 None:intergenic
GAAGGAAGGATCTGGAAAGG+GGG 0.586577 1.2:-21123727 MS.gene43566:CDS
TTTGTACGCTATGGGAAGGA+TGG 0.588075 1.2:-21123367 MS.gene43566:CDS
AGTCAGATTCTCCTCTTGTG+TGG 0.592007 1.2:+21123554 None:intergenic
TGAAGGAAGGATCTGGAAAG+GGG 0.592827 1.2:-21123728 MS.gene43566:CDS
AACTGAGACCTGAAGTAACC+GGG 0.593695 1.2:+21123649 None:intergenic
ACAGGACCTAGAAGTTGTAT+GGG 0.597811 1.2:-21123240 MS.gene43566:CDS
AGATAACTGGGCCACACAAG+AGG 0.598238 1.2:-21123565 MS.gene43566:CDS
GGACTAACACGCTCTCCACT+AGG 0.603467 1.2:+21123411 None:intergenic
TTTCACATAAAGGTGGTGGA+AGG 0.605673 1.2:-21123162 MS.gene43566:CDS
TTTGTTCTTCACATGAAACA+TGG 0.607012 1.2:-21123114 MS.gene43566:CDS
ATCAAAAGTGAACCTACTCA+AGG 0.610670 1.2:+21124052 None:intergenic
TGTATGTGAAGTAGGTGCTC+AGG 0.611163 1.2:-21124090 MS.gene43566:CDS
TCAAGAAATCAAAGATAACT+GGG 0.612824 1.2:-21123577 MS.gene43566:CDS
ACTCTTTGTACGCTATGGGA+AGG 0.618250 1.2:-21123371 MS.gene43566:CDS
AATGAAGGAAGGATCTGGAA+AGG 0.624386 1.2:-21123730 MS.gene43566:CDS
ACCTGGAGGATGCCTTGAGT+AGG 0.627785 1.2:-21124064 MS.gene43566:CDS
TGGTCAAGAAAGGAAGCTAA+GGG 0.632333 1.2:-21123862 MS.gene43566:CDS
ACCGAAATTTCACATAAAGG+TGG 0.633013 1.2:-21123169 MS.gene43566:CDS
TCAAGATACTCATCTCTCGA+AGG 0.633356 1.2:+21123531 None:intergenic
TACAGGAGGATAAAGTCTCA+AGG 0.637791 1.2:+21123473 None:intergenic
GGAAGGATGGAACAAATATG+GGG 0.639334 1.2:-21123354 MS.gene43566:CDS
ATGTGAAGTAGGTGCTCAGG+TGG 0.640187 1.2:-21124087 MS.gene43566:CDS
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.2:+21123459 None:intergenic
AGCGTGTTAGTCCAAATACA+AGG 0.645393 1.2:-21123401 MS.gene43566:CDS
AGGTGCTCAGGTGGACCTGG+AGG 0.655414 1.2:-21124078 MS.gene43566:CDS
AAATCCGATATACTACCTAG+TGG 0.664104 1.2:-21123426 MS.gene43566:CDS
AGGCTTCACATAGAGCTCCG+TGG 0.685645 1.2:+21123493 None:intergenic
GATAAGCTAGTGTACCTCCA+CGG 0.695924 1.2:-21123510 MS.gene43566:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.2:+21123900 None:intergenic
CGCACGTATGGAAACAACAG+CGG 0.731056 1.2:-21124214 MS.gene43566:CDS
CTTCACATAGAGCTCCGTGG+AGG 0.750978 1.2:+21123496 None:intergenic
AAGAACAAAAGAAAGCTTCG+GGG 0.756350 1.2:+21123128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAATCAAAAATATCT+TGG + chr1.2:21123442-21123461 None:intergenic 15.0%
!!! CAAGATATTTTTGATTTTTT+TGG - chr1.2:21123440-21123459 MS.gene43566:CDS 15.0%
!! ATGAATTTGTACCAATTAAT+TGG - chr1.2:21123210-21123229 MS.gene43566:CDS 20.0%
!!! GATATTTTTGATTTTTTTGG+AGG - chr1.2:21123443-21123462 MS.gene43566:CDS 20.0%
!!! TTTGATTTCTTGAATGATTT+TGG + chr1.2:21124116-21124135 None:intergenic 20.0%
! ACAAACTATGAAGAAAAAGT+TGG - chr1.2:21123559-21123578 MS.gene43566:CDS 25.0%
! ATGTCAATAATTCAGTGTAT+AGG - chr1.2:21123131-21123150 MS.gene43566:CDS 25.0%
! GAGTATAATAACCTTGTATT+TGG + chr1.2:21124313-21124332 None:intergenic 25.0%
! TAGCTTCATTCAAATGAAAA+TGG - chr1.2:21124492-21124511 MS.gene43566:CDS 25.0%
! TCAAGAAATCAAAGATAACT+GGG - chr1.2:21124123-21124142 MS.gene43566:CDS 25.0%
! TCACATACATCATTAAGAAA+TGG + chr1.2:21123599-21123618 None:intergenic 25.0%
! TGAAAAAGGTTACATAATCA+TGG + chr1.2:21123283-21123302 None:intergenic 25.0%
! TGTTTCATTCATTTCTCAAA+AGG - chr1.2:21123513-21123532 MS.gene43566:CDS 25.0%
! TTCAAGAAATCAAAGATAAC+TGG - chr1.2:21124122-21124141 MS.gene43566:CDS 25.0%
!!! ACTTTTTCTTCATAGTTTGT+TGG + chr1.2:21123559-21123578 None:intergenic 25.0%
!!! ATTTTTGATTTTTTTGGAGG+TGG - chr1.2:21123446-21123465 MS.gene43566:CDS 25.0%
!!! TTGTAGTTTTACTAAAGTGT+AGG + chr1.2:21123112-21123131 None:intergenic 25.0%
AAAGCAATGAACTTGTAAGA+TGG + chr1.2:21124436-21124455 None:intergenic 30.0%
AAGTTCATTGCTTTCAATAC+AGG - chr1.2:21124442-21124461 MS.gene43566:CDS 30.0%
ACCACCTTTATGTGAAATTT+CGG + chr1.2:21124535-21124554 None:intergenic 30.0%
ATTATACTCTTTGTACGCTA+TGG - chr1.2:21124324-21124343 MS.gene43566:CDS 30.0%
ATTATCACCTCATCTATAAC+AGG + chr1.2:21123764-21123783 None:intergenic 30.0%
ATTGCACATATATGCTCAAA+AGG + chr1.2:21124253-21124272 None:intergenic 30.0%
CATCATTAAGAAATGGTAGT+AGG + chr1.2:21123592-21123611 None:intergenic 30.0%
CCAATTAATTGGCCAATAAT+TGG - chr1.2:21123221-21123240 MS.gene43566:CDS 30.0%
CCAATTATTGGCCAATTAAT+TGG + chr1.2:21123224-21123243 None:intergenic 30.0%
CTTAATGATGTATGTGAAGT+AGG - chr1.2:21123602-21123621 MS.gene43566:CDS 30.0%
GGTTACATAATCATGGAAAT+TGG + chr1.2:21123276-21123295 None:intergenic 30.0%
GTTACCGAAATTTCACATAA+AGG - chr1.2:21124528-21124547 MS.gene43566:CDS 30.0%
TAGATGAGGTGATAATTTAC+CGG - chr1.2:21123768-21123787 MS.gene43566:CDS 30.0%
TCAATAATTCAGTGTATAGG+AGG - chr1.2:21123134-21123153 MS.gene43566:CDS 30.0%
TCACATGAAACATGGTTTAA+AGG - chr1.2:21124594-21124613 MS.gene43566:CDS 30.0%
TCCATGATGTTTCATGAAAA+AGG + chr1.2:21123297-21123316 None:intergenic 30.0%
TGAAGAACAAAAGAAAGCTT+CGG + chr1.2:21124577-21124596 None:intergenic 30.0%
TTATACTCTTTGTACGCTAT+GGG - chr1.2:21124325-21124344 MS.gene43566:CDS 30.0%
TTTGTTCTTCACATGAAACA+TGG - chr1.2:21124586-21124605 MS.gene43566:CDS 30.0%
! CTTAGCTCATTAAACTTGTT+TGG + chr1.2:21123716-21123735 None:intergenic 30.0%
! GAAACTGTCAAGATTTTCTT+CGG + chr1.2:21123867-21123886 None:intergenic 30.0%
! TTTTTCATGAAACATCATGG+AGG - chr1.2:21123296-21123315 MS.gene43566:CDS 30.0%
!! ACCTTTTTCATGAAACATCA+TGG - chr1.2:21123293-21123312 MS.gene43566:CDS 30.0%
AAATCCGATATACTACCTAG+TGG - chr1.2:21124274-21124293 MS.gene43566:CDS 35.0%
AAGAACAAAAGAAAGCTTCG+GGG + chr1.2:21124575-21124594 None:intergenic 35.0%
ACCGAAATTTCACATAAAGG+TGG - chr1.2:21124531-21124550 MS.gene43566:CDS 35.0%
AGCATCTGCACTATTACATT+TGG - chr1.2:21123671-21123690 MS.gene43566:CDS 35.0%
AGTGGATGTATAGGAAGATT+AGG + chr1.2:21123172-21123191 None:intergenic 35.0%
ATCAAAAGTGAACCTACTCA+AGG + chr1.2:21123651-21123670 None:intergenic 35.0%
ATCAACATTCATTGGATCAC+TGG + chr1.2:21123372-21123391 None:intergenic 35.0%
ATCTCTTCCTGTTATAGATG+AGG - chr1.2:21123754-21123773 MS.gene43566:CDS 35.0%
GAAATTTCACATAAAGGTGG+TGG - chr1.2:21124534-21124553 MS.gene43566:CDS 35.0%
GAAGAACAAAAGAAAGCTTC+GGG + chr1.2:21124576-21124595 None:intergenic 35.0%
GATGTATAGGAAGATTAGGA+TGG + chr1.2:21123168-21123187 None:intergenic 35.0%
GCAATGTGATCAACATTCAT+TGG + chr1.2:21123380-21123399 None:intergenic 35.0%
TAAATTCCAATTCGCACGTA+TGG - chr1.2:21123474-21123493 MS.gene43566:CDS 35.0%
TCTTCCTATACATCCACTAT+TGG - chr1.2:21123174-21123193 MS.gene43566:CDS 35.0%
TGTTTCAACTCATCCTATTG+TGG - chr1.2:21124087-21124106 MS.gene43566:CDS 35.0%
TTGTTGGAAGAAGTTCTTGA+AGG + chr1.2:21123543-21123562 None:intergenic 35.0%
! AACTTGTTTGGAAGGCAATT+AGG + chr1.2:21123704-21123723 None:intergenic 35.0%
! CACATTGCAAGCAAGAATTT+TGG - chr1.2:21123392-21123411 MS.gene43566:CDS 35.0%
! CATATATGCTCAAAAGGTAC+AGG + chr1.2:21124247-21124266 None:intergenic 35.0%
! CTTCCTTCATTAGTGCTTTT+AGG + chr1.2:21123961-21123980 None:intergenic 35.0%
! GCTCATTAAACTTGTTTGGA+AGG + chr1.2:21123712-21123731 None:intergenic 35.0%
!! AGCAAGAATTTTGGCAACTA+CGG - chr1.2:21123401-21123420 MS.gene43566:CDS 35.0%
!! CTAAAAGCACTAATGAAGGA+AGG - chr1.2:21123959-21123978 MS.gene43566:CDS 35.0%
!! CTTCCTAAAAGCACTAATGA+AGG - chr1.2:21123955-21123974 MS.gene43566:CDS 35.0%
!! TCTCTCTTTTTAGCAGGAAA+TGG - chr1.2:21124028-21124047 MS.gene43566:CDS 35.0%
!!! ATGATTTTGGCTTCCACAAT+AGG + chr1.2:21124103-21124122 None:intergenic 35.0%
AACAAATATGGGGAGAAGAC+TGG - chr1.2:21124356-21124375 MS.gene43566:CDS 40.0%
AATGAAGGAAGGATCTGGAA+AGG - chr1.2:21123970-21123989 MS.gene43566:CDS 40.0%
ACAGGACCTAGAAGTTGTAT+GGG - chr1.2:21124460-21124479 MS.gene43566:CDS 40.0%
ACCTAGAAGTTGTATGGGTA+AGG - chr1.2:21124465-21124484 MS.gene43566:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG - chr1.2:21123792-21123811 MS.gene43566:CDS 40.0%
AGCGTGTTAGTCCAAATACA+AGG - chr1.2:21124299-21124318 MS.gene43566:CDS 40.0%
ATGAAGGAAGGATCTGGAAA+GGG - chr1.2:21123971-21123990 MS.gene43566:CDS 40.0%
CTCTCCACTAGGTAGTATAT+CGG + chr1.2:21124281-21124300 None:intergenic 40.0%
GCCAATAATTGGTATGCTAC+CGG - chr1.2:21123232-21123251 MS.gene43566:CDS 40.0%
GGAAGGATGGAACAAATATG+GGG - chr1.2:21124346-21124365 MS.gene43566:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG - chr1.2:21124381-21124400 MS.gene43566:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG - chr1.2:21124345-21124364 MS.gene43566:CDS 40.0%
GTCTATGGAAGCTGCAAAAA+TGG - chr1.2:21123807-21123826 MS.gene43566:CDS 40.0%
TACAGGACCTAGAAGTTGTA+TGG - chr1.2:21124459-21124478 MS.gene43566:CDS 40.0%
TACAGGAGGATAAAGTCTCA+AGG + chr1.2:21124230-21124249 None:intergenic 40.0%
TCAAGATACTCATCTCTCGA+AGG + chr1.2:21124172-21124191 None:intergenic 40.0%
TCCTTACCCATACAACTTCT+AGG + chr1.2:21124469-21124488 None:intergenic 40.0%
TGGAATTTAAGCCTGAGAGA+TGG - chr1.2:21124380-21124399 MS.gene43566:CDS 40.0%
TGGGAAGGATGGAACAAATA+TGG - chr1.2:21124344-21124363 MS.gene43566:CDS 40.0%
TGGTCAAGAAAGGAAGCTAA+GGG - chr1.2:21123838-21123857 MS.gene43566:CDS 40.0%
TTGGTCAAGAAAGGAAGCTA+AGG - chr1.2:21123837-21123856 MS.gene43566:CDS 40.0%
TTGTTTCCATACGTGCGAAT+TGG + chr1.2:21123483-21123502 None:intergenic 40.0%
! ATATGCTCAAAAGGTACAGG+AGG + chr1.2:21124244-21124263 None:intergenic 40.0%
!! AATTTTGGCAACTACGGAAG+GGG - chr1.2:21123407-21123426 MS.gene43566:CDS 40.0%
!! AGAATTTTGGCAACTACGGA+AGG - chr1.2:21123405-21123424 MS.gene43566:CDS 40.0%
!! GAATTTTGGCAACTACGGAA+GGG - chr1.2:21123406-21123425 MS.gene43566:CDS 40.0%
!! GCACTTTCTCTCTTTTTAGC+AGG - chr1.2:21124022-21124041 MS.gene43566:CDS 40.0%
!! GTCTCCAATAGTGGATGTAT+AGG + chr1.2:21123181-21123200 None:intergenic 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG - chr1.2:21124538-21124557 MS.gene43566:CDS 40.0%
AAAGAAAGCTTCGGGGTTAC+AGG + chr1.2:21124568-21124587 None:intergenic 45.0%
AACTGAGACCTGAAGTAACC+GGG + chr1.2:21124054-21124073 None:intergenic 45.0%
AAGAAAGCTTCGGGGTTACA+GGG + chr1.2:21124567-21124586 None:intergenic 45.0%
ACTCTTTGTACGCTATGGGA+AGG - chr1.2:21124329-21124348 MS.gene43566:CDS 45.0%
AGTCAGATTCTCCTCTTGTG+TGG + chr1.2:21124149-21124168 None:intergenic 45.0%
CAACTGAGACCTGAAGTAAC+CGG + chr1.2:21124055-21124074 None:intergenic 45.0%
CTCTATTGCGTCTCCAATAG+TGG + chr1.2:21123190-21123209 None:intergenic 45.0%
CTGCAAAAATGGCTCAACGT+TGG - chr1.2:21123818-21123837 MS.gene43566:CDS 45.0%
GATAAGCTAGTGTACCTCCA+CGG - chr1.2:21124190-21124209 MS.gene43566:CDS 45.0%
GCACTAATGAAGGAAGGATC+TGG - chr1.2:21123965-21123984 MS.gene43566:CDS 45.0%
GCCGGTAGCATACCAATTAT+TGG + chr1.2:21123236-21123255 None:intergenic 45.0%
TAAGCCTGAGAGATGGGTAT+CGG - chr1.2:21124387-21124406 MS.gene43566:CDS 45.0%
TGAAGGAAGGATCTGGAAAG+GGG - chr1.2:21123972-21123991 MS.gene43566:CDS 45.0%
TGTATGTGAAGTAGGTGCTC+AGG - chr1.2:21123610-21123629 MS.gene43566:CDS 45.0%
TTTGTACGCTATGGGAAGGA+TGG - chr1.2:21124333-21124352 MS.gene43566:CDS 45.0%
! CGTTTCGATTTGAAGGAGCT+TGG - chr1.2:21123321-21123340 MS.gene43566:CDS 45.0%
! GATAGATTACGCAAAAGCGC+CGG + chr1.2:21123254-21123273 None:intergenic 45.0%
! GGAGGAACGTTTCGATTTGA+AGG - chr1.2:21123314-21123333 MS.gene43566:CDS 45.0%
!! ATTTTGGCAACTACGGAAGG+GGG - chr1.2:21123408-21123427 MS.gene43566:CDS 45.0%
!! CTTTTTAGCAGGAAATGGCC+CGG - chr1.2:21124033-21124052 MS.gene43566:CDS 45.0%
!!! CAGGTCTCAGTTGGTTTTTC+TGG - chr1.2:21124062-21124081 MS.gene43566:CDS 45.0%
AATATGGGGAGAAGACTGGC+TGG - chr1.2:21124360-21124379 MS.gene43566:CDS 50.0%
AGATAACTGGGCCACACAAG+AGG - chr1.2:21124135-21124154 MS.gene43566:CDS 50.0%
AGGATCTGGAAAGGGGGAAA+TGG - chr1.2:21123979-21123998 MS.gene43566:CDS 50.0%
ATGTGAAGTAGGTGCTCAGG+TGG - chr1.2:21123613-21123632 MS.gene43566:CDS 50.0%
CGCACGTATGGAAACAACAG+CGG - chr1.2:21123486-21123505 MS.gene43566:CDS 50.0%
CGGTTACTTCAGGTCTCAGT+TGG - chr1.2:21124053-21124072 MS.gene43566:CDS 50.0%
CTTTCCGATACCCATCTCTC+AGG + chr1.2:21124394-21124413 None:intergenic 50.0%
GAAGGAAGGATCTGGAAAGG+GGG - chr1.2:21123973-21123992 MS.gene43566:CDS 50.0%
GACAACGTGGTATGAAGTGC+CGG + chr1.2:21123790-21123809 None:intergenic 50.0%
GCACTTGCTTTGCTCTTGCT+TGG + chr1.2:21123912-21123931 None:intergenic 50.0%
GGCTCAACGTTGGTCAAGAA+AGG - chr1.2:21123828-21123847 MS.gene43566:CDS 50.0%
GTGCAGCAGCAGTGAAGATA+TGG - chr1.2:21123928-21123947 MS.gene43566:CDS 50.0%
TGCAGCTTCCATAGACAACG+TGG + chr1.2:21123803-21123822 None:intergenic 50.0%
!! GAGAGATGGGTATCGGAAAG+AGG - chr1.2:21124394-21124413 MS.gene43566:CDS 50.0%
ACCTGGAGGATGCCTTGAGT+AGG - chr1.2:21123636-21123655 MS.gene43566:CDS 55.0%
AGGCTTCACATAGAGCTCCG+TGG + chr1.2:21124210-21124229 None:intergenic 55.0%
CTTCACATAGAGCTCCGTGG+AGG + chr1.2:21124207-21124226 None:intergenic 55.0%
GGAAATGGCCCGGTTACTTC+AGG - chr1.2:21124043-21124062 MS.gene43566:CDS 55.0%
GGACTAACACGCTCTCCACT+AGG + chr1.2:21124292-21124311 None:intergenic 55.0%
! ACCTACTCAAGGCATCCTCC+AGG + chr1.2:21123640-21123659 None:intergenic 55.0%
AGTAGGTGCTCAGGTGGACC+TGG - chr1.2:21123619-21123638 MS.gene43566:CDS 60.0%
AGGTGCTCAGGTGGACCTGG+AGG - chr1.2:21123622-21123641 MS.gene43566:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 21123080 21124642 21123080 ID=MS.gene43566
chr1.2 mRNA 21123080 21124642 21123080 ID=MS.gene43566.t1;Parent=MS.gene43566
chr1.2 exon 21123080 21124642 21123080 ID=MS.gene43566.t1.exon1;Parent=MS.gene43566.t1
chr1.2 CDS 21123080 21124642 21123080 ID=cds.MS.gene43566.t1;Parent=MS.gene43566.t1
Gene Sequence

>MS.gene43566

ATGCATGAAAGATACATGCAATTTGCAAACCTACACTTTAGTAAAACTACAATGTCAATAATTCAGTGTATAGGAGGATTTGTAGCCATCCTAATCTTCCTATACATCCACTATTGGAGACGCAATAGAGATGAATTTGTACCAATTAATTGGCCAATAATTGGTATGCTACCGGCGCTTTTGCGTAATCTATCCAATTTCCATGATTATGTAACCTTTTTCATGAAACATCATGGAGGAACGTTTCGATTTGAAGGAGCTTGGTTCACAAACACTAGTTTTATCGTTACCAGTGATCCAATGAATGTTGATCACATTGCAAGCAAGAATTTTGGCAACTACGGAAGGGGGTCGAACTTCCAAGATATTTTTGATTTTTTTGGAGGTGGTATTTTAAATTCCAATTCGCACGTATGGAAACAACAGCGGACAATGTTTCATTCATTTCTCAAAAGGAAAACCTTCAAGAACTTCTTCCAACAAACTATGAAGAAAAAGTTGGAGAACTGCCTACTACCATTTCTTAATGATGTATGTGAAGTAGGTGCTCAGGTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTACATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCAACGTTGGTCAAGAAAGGAAGCTAAGGGAAGCCGAAGAAAATCTTGACAGTTTCTTGTATGAAAGTATTACATTTTCCAAGCAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGATATGGATGACTTCCTAAAAGCACTAATGAAGGAAGGATCTGGAAAGGGGGAAATGGATGAGAATCTTAGAGACAATGCACTTTCTCTCTTTTTAGCAGGAAATGGCCCGGTTACTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATCATTCAAGAAATCAAAGATAACTGGGCCACACAAGAGGAGAATCTGACTCCTTCGAGAGATGAGTATCTTGATAAGCTAGTGTACCTCCACGGAGCTCTATGTGAAGCCTTGAGACTTTATCCTCCTGTACCTTTTGAGCATATATGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTATTATACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGGCTGGAATTTAAGCCTGAGAGATGGGTATCGGAAAGAGGACAGATTATACATGTACCATCTTACAAGTTCATTGCTTTCAATACAGGACCTAGAAGTTGTATGGGTAAGGATATTAGCTTCATTCAAATGAAAATGGTCGCAGCTGCTTTGTTACCGAAATTTCACATAAAGGTGGTGGAAGGTCACCCTGTAACCCCGAAGCTTTCTTTTGTTCTTCACATGAAACATGGTTTAAAGGTTAAAGTCAGTAAAAGATGCATTTGA
Protein sequence

>MS.gene43566.t1

MHERYMQFANLHFSKTTMSIIQCIGGFVAILIFLYIHYWRRNRDEFVPINWPIIGMLPALLRNLSNFHDYVTFFMKHHGGTFRFEGAWFTNTSFIVTSDPMNVDHIASKNFGNYGRGSNFQDIFDFFGGGILNSNSHVWKQQRTMFHSFLKRKTFKNFFQQTMKKKLENCLLPFLNDVCEVGAQVDLEDALSRFTFDSICTITFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFIPRCLWKLQKWLNVGQERKLREAEENLDSFLYESITFSKQEQSKCSSSEDMDDFLKALMKEGSGKGEMDENLRDNALSLFLAGNGPVTSGLSWFFWLVSTHPIVEAKIIQEIKDNWATQEENLTPSRDEYLDKLVYLHGALCEALRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDWLEFKPERWVSERGQIIHVPSYKFIAFNTGPRSCMGKDISFIQMKMVAAALLPKFHIKVVEGHPVTPKLSFVLHMKHGLKVKVSKRCI