AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052854


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052854.t1 MTR_1g035670 92.063 504 40 0 13 516 1 504 0.0 977
MS.gene052854.t1 MTR_1g036130 85.236 508 71 2 13 516 1 508 0.0 890
MS.gene052854.t1 MTR_1g035760 82.738 504 64 1 13 516 1 481 0.0 859
MS.gene052854.t1 MTR_1g035860 86.207 435 60 0 22 456 16 450 0.0 784
MS.gene052854.t1 MTR_1g036010 72.157 510 135 4 13 516 1 509 0.0 775
MS.gene052854.t1 MTR_1g035830 71.513 509 140 3 13 516 1 509 0.0 758
MS.gene052854.t1 MTR_1g035940 70.000 510 146 4 13 516 1 509 0.0 743
MS.gene052854.t1 MTR_1g035750 63.780 508 179 3 13 516 1 507 0.0 674
MS.gene052854.t1 MTR_1g035580 61.057 511 179 6 13 516 1 498 0.0 633
MS.gene052854.t1 MTR_1g035790 59.881 506 199 4 13 516 1 504 0.0 633
MS.gene052854.t1 MTR_1g069715 74.939 407 96 3 96 496 1 407 0.0 632
MS.gene052854.t1 MTR_1g036200 61.446 498 185 5 22 516 8 501 0.0 624
MS.gene052854.t1 MTR_1g036270 59.223 515 197 7 13 516 1 513 0.0 622
MS.gene052854.t1 MTR_1g050362 60.159 502 190 6 22 515 8 507 0.0 622
MS.gene052854.t1 MTR_1g035800 58.090 513 203 6 13 514 1 512 0.0 588
MS.gene052854.t1 MTR_8g088470 53.239 494 220 5 23 514 7 491 0.0 553
MS.gene052854.t1 MTR_7g033580 53.614 498 217 6 22 516 10 496 0.0 550
MS.gene052854.t1 MTR_7g033570 52.016 496 228 5 22 516 10 496 0.0 542
MS.gene052854.t1 MTR_6g004670 49.789 474 232 3 44 514 35 505 2.98e-173 498
MS.gene052854.t1 MTR_6g004630 48.532 511 250 7 11 516 3 505 8.29e-173 497
MS.gene052854.t1 MTR_6g004610 49.356 466 229 4 51 513 1 462 1.85e-164 474
MS.gene052854.t1 MTR_6g004590 45.174 518 266 5 13 516 4 517 2.90e-163 473
MS.gene052854.t1 MTR_6g004600 45.560 518 264 5 13 516 4 517 3.56e-163 473
MS.gene052854.t1 MTR_1g037560 39.959 483 274 7 45 515 66 544 1.19e-123 373
MS.gene052854.t1 MTR_4g075110 39.231 520 294 9 9 514 38 549 9.24e-123 371
MS.gene052854.t1 MTR_1g037550 39.673 489 271 7 45 515 66 548 8.16e-122 369
MS.gene052854.t1 MTR_8g030590 35.632 522 296 10 18 514 4 510 9.01e-98 306
MS.gene052854.t1 MTR_4g012320 59.276 221 90 0 296 516 5 225 5.74e-96 290
MS.gene052854.t1 MTR_8g098435 34.601 526 301 10 9 514 3 505 8.59e-94 295
MS.gene052854.t1 MTR_5g070010 34.545 495 286 9 42 514 30 508 1.06e-91 289
MS.gene052854.t1 MTR_3g463060 33.607 488 289 9 42 514 35 502 4.29e-86 275
MS.gene052854.t1 MTR_7g088330 33.013 521 319 11 8 514 4 508 1.97e-81 263
MS.gene052854.t1 MTR_1g070365 35.391 486 279 12 43 514 40 504 1.29e-80 260
MS.gene052854.t1 MTR_8g035860 33.861 505 308 13 22 514 19 509 3.38e-80 259
MS.gene052854.t1 MTR_1g070345 34.086 487 286 13 43 515 40 505 5.53e-80 259
MS.gene052854.t1 MTR_8g035820 34.792 480 289 12 47 514 42 509 1.10e-79 258
MS.gene052854.t1 MTR_8g035810 32.490 514 324 12 12 514 9 510 1.17e-78 255
MS.gene052854.t1 MTR_7g096340 33.485 439 265 9 87 515 82 503 7.56e-78 253
MS.gene052854.t1 MTR_7g029275 32.091 483 305 10 42 514 39 508 2.14e-76 249
MS.gene052854.t1 MTR_3g080580 31.755 507 286 11 42 515 39 518 3.38e-76 249
MS.gene052854.t1 MTR_6g084040 64.130 184 46 3 13 195 1 165 4.24e-76 237
MS.gene052854.t1 MTR_7g096320 33.562 438 266 11 87 515 83 504 1.42e-73 242
MS.gene052854.t1 MTR_8g035780 34.014 441 269 9 88 515 80 511 1.67e-73 242
MS.gene052854.t1 MTR_4g054920 32.962 449 250 11 92 514 93 516 4.29e-73 241
MS.gene052854.t1 MTR_5g019140 29.945 541 333 13 3 515 9 531 4.76e-73 241
MS.gene052854.t1 MTR_4g119660 30.303 528 322 13 21 515 2 516 4.30e-72 238
MS.gene052854.t1 MTR_8g035760 30.252 476 311 10 47 514 49 511 8.01e-71 235
MS.gene052854.t1 MTR_1g102220 31.735 438 281 9 86 514 78 506 1.84e-70 234
MS.gene052854.t1 MTR_7g406990 37.677 353 207 8 45 389 49 396 1.06e-69 230
MS.gene052854.t1 MTR_1g060550 32.688 413 239 8 90 487 93 481 2.17e-69 231
MS.gene052854.t1 MTR_2g086040 33.105 438 249 11 92 514 90 498 8.11e-69 229
MS.gene052854.t1 MTR_8g035680 29.645 479 311 12 47 514 49 512 2.49e-68 228
MS.gene052854.t1 MTR_1g050590 87.069 116 15 0 262 377 3 118 6.79e-68 214
MS.gene052854.t1 MTR_8g035810 31.360 456 291 11 12 457 9 452 1.28e-62 212
MS.gene052854.t1 MTR_1g040110 74.775 111 28 0 138 248 57 167 2.11e-56 186
MS.gene052854.t1 MTR_8g035680 30.728 371 237 8 154 514 5 365 6.09e-54 186
MS.gene052854.t1 MTR_1g036140 85.417 96 14 0 263 358 68 163 9.42e-50 169
MS.gene052854.t1 MTR_1g036140 79.412 68 14 0 13 80 1 68 1.18e-31 120
MS.gene052854.t1 MTR_8g035810 30.025 403 253 12 12 401 9 395 4.97e-45 163
MS.gene052854.t1 MTR_1g102210 31.014 345 194 11 180 514 51 361 2.37e-41 152
MS.gene052854.t1 MTR_1g070370 36.471 255 142 6 181 432 5 242 4.46e-38 140
MS.gene052854.t1 MTR_7g079440 26.566 463 287 17 73 514 218 648 9.79e-35 139
MS.gene052854.t1 MTR_1g035660 55.752 113 34 3 173 285 21 117 9.45e-31 117
MS.gene052854.t1 MTR_3g093530 25.243 412 282 11 108 513 132 523 5.92e-30 123
MS.gene052854.t1 MTR_1g062190 22.560 461 315 15 70 514 105 539 4.20e-27 115
MS.gene052854.t1 MTR_5g009110 23.093 485 317 14 72 515 102 571 6.53e-27 114
MS.gene052854.t1 MTR_7g079440 27.083 384 229 15 73 437 218 569 3.38e-26 112
MS.gene052854.t1 MTR_7g006900 24.060 399 261 13 121 509 101 467 1.69e-25 109
MS.gene052854.t1 MTR_6g017325 22.959 392 274 9 121 509 136 502 5.07e-23 102
MS.gene052854.t1 MTR_5g009110 22.989 435 282 13 122 515 1 423 5.05e-22 99.0
MS.gene052854.t1 MTR_1g101040 24.213 413 275 14 109 511 128 512 2.18e-21 97.8
MS.gene052854.t1 MTR_1g085680 22.748 444 295 13 83 509 99 511 2.45e-21 97.4
MS.gene052854.t1 MTR_0147s0030 22.698 467 317 12 63 513 92 530 2.84e-21 97.4
MS.gene052854.t1 MTR_0025s0110 22.395 451 312 15 71 511 101 523 3.58e-21 97.1
MS.gene052854.t1 MTR_0181s0030 24.481 482 323 18 22 487 14 470 5.74e-21 96.3
MS.gene052854.t1 MTR_6g008620 24.048 420 273 15 84 485 100 491 2.53e-20 94.7
MS.gene052854.t1 MTR_8g012585 25.939 293 203 8 228 514 165 449 3.05e-20 94.0
MS.gene052854.t1 MTR_6g072490 23.696 460 293 19 71 511 90 510 3.33e-20 94.0
MS.gene052854.t1 MTR_4g104610 22.718 493 328 15 15 484 4 466 3.46e-20 94.0
MS.gene052854.t1 MTR_2g062670 31.183 186 98 5 180 355 67 232 5.81e-20 93.2
MS.gene052854.t1 MTR_2g072270 24.890 454 282 17 76 509 104 518 5.82e-20 93.6
MS.gene052854.t1 MTR_6g008530 25.410 244 170 4 249 485 257 495 1.62e-19 92.0
MS.gene052854.t1 MTR_8g035790 44.444 99 53 2 418 515 1 98 1.78e-19 84.0
MS.gene052854.t1 MTR_2g010320 25.843 356 245 11 169 514 157 503 2.06e-19 91.7
MS.gene052854.t1 MTR_8g008530 24.396 414 256 14 121 513 141 518 2.66e-19 91.3
MS.gene052854.t1 MTR_5g009110 24.079 353 227 10 72 404 102 433 4.95e-19 90.1
MS.gene052854.t1 MTR_6g008640 25.575 391 243 12 112 485 130 489 4.98e-19 90.5
MS.gene052854.t1 MTR_2g010380 24.816 407 278 13 126 514 113 509 6.09e-19 90.1
MS.gene052854.t1 MTR_4g018800 23.888 427 267 15 84 485 98 491 7.26e-19 90.1
MS.gene052854.t1 MTR_8g046580 44.211 95 48 2 397 489 201 292 8.15e-19 87.8
MS.gene052854.t1 MTR_6g008430 25.000 284 199 7 210 485 207 484 1.21e-18 89.4
MS.gene052854.t1 MTR_6g008600 25.090 279 169 6 237 485 225 493 1.64e-18 89.0
MS.gene052854.t1 MTR_4g104540 23.404 423 277 15 99 504 27 419 1.83e-18 88.2
MS.gene052854.t1 MTR_1g015860 22.505 551 357 19 5 515 9 529 2.34e-18 88.6
MS.gene052854.t1 MTR_2g061200 23.721 430 281 13 108 513 122 528 2.85e-18 88.2
MS.gene052854.t1 MTR_2g023680 23.445 418 267 11 117 513 132 517 3.10e-18 88.2
MS.gene052854.t1 MTR_5g070920 26.104 249 170 5 245 484 225 468 3.49e-18 87.8
MS.gene052854.t1 MTR_5g070690 27.459 244 162 4 249 484 231 467 3.85e-18 87.8
MS.gene052854.t1 MTR_5g070800 27.459 244 162 4 249 484 231 467 3.85e-18 87.8
MS.gene052854.t1 MTR_7g055793 21.569 459 309 13 71 513 45 468 3.92e-18 87.4
MS.gene052854.t1 MTR_7g055793 21.569 459 309 13 71 513 100 523 4.61e-18 87.4
MS.gene052854.t1 MTR_2g010250 27.376 263 183 6 259 514 244 505 5.14e-18 87.4
MS.gene052854.t1 MTR_5g021390 23.045 486 331 17 23 492 28 486 5.14e-18 87.4
MS.gene052854.t1 MTR_6g008650 23.459 503 321 17 21 485 15 491 7.30e-18 87.0
MS.gene052854.t1 MTR_7g079440 26.298 289 179 10 73 347 218 486 7.47e-18 86.7
MS.gene052854.t1 MTR_6g008500 25.703 249 173 7 244 485 258 501 7.65e-18 87.0
MS.gene052854.t1 MTR_1g101050 26.374 273 184 7 244 511 248 508 8.06e-18 86.7
MS.gene052854.t1 MTR_2g010330 28.226 248 167 7 275 514 263 507 9.34e-18 86.7
MS.gene052854.t1 MTR_6g042540 26.316 247 163 6 249 485 247 484 9.67e-18 86.7
MS.gene052854.t1 MTR_6g022450 24.355 349 224 9 178 513 177 498 1.17e-17 86.3
MS.gene052854.t1 MTR_4g089055 25.065 387 256 12 116 490 122 486 1.87e-17 85.5
MS.gene052854.t1 MTR_2g061750 30.500 200 103 7 82 259 9 194 2.10e-17 81.3
MS.gene052854.t1 MTR_2g061740 30.729 192 99 6 90 259 15 194 2.57e-17 80.9
MS.gene052854.t1 MTR_4g071710 28.214 280 169 9 233 492 219 486 3.25e-17 84.7
MS.gene052854.t1 MTR_7g098550 24.330 448 291 14 73 509 90 500 3.39e-17 84.7
MS.gene052854.t1 MTR_0171s0030 27.327 333 215 13 166 487 72 388 3.90e-17 84.0
MS.gene052854.t1 MTR_7g098550 24.222 450 281 14 73 509 90 492 4.24e-17 84.3
MS.gene052854.t1 MTR_3g014880 26.693 251 169 6 244 485 248 492 4.34e-17 84.3
MS.gene052854.t1 MTR_8g098565 29.412 204 137 4 317 514 304 506 4.56e-17 84.3
MS.gene052854.t1 MTR_4g089030 24.661 369 246 12 134 490 140 488 5.49e-17 84.3
MS.gene052854.t1 MTR_4g089025 24.665 373 244 12 134 493 144 492 8.44e-17 83.6
MS.gene052854.t1 MTR_0171s0020 28.090 267 157 9 239 487 227 476 9.64e-17 83.2
MS.gene052854.t1 MTR_5g070830 25.498 251 168 5 245 483 335 578 1.08e-16 83.6
MS.gene052854.t1 MTR_0171s0010 27.953 254 150 9 252 487 240 478 1.76e-16 82.4
MS.gene052854.t1 MTR_5g095260 25.683 366 236 15 134 490 134 472 1.90e-16 82.4
MS.gene052854.t1 MTR_8g042000 22.826 460 289 16 71 506 99 516 2.25e-16 82.4
MS.gene052854.t1 MTR_8g012590 23.592 284 200 6 234 513 217 487 2.82e-16 82.0
MS.gene052854.t1 MTR_6g042610 25.514 243 171 5 249 485 247 485 3.00e-16 82.0
MS.gene052854.t1 MTR_4g089020 25.060 419 267 15 116 513 100 492 3.07e-16 81.6
MS.gene052854.t1 MTR_2g010290 29.717 212 139 6 310 514 324 532 4.53e-16 81.3
MS.gene052854.t1 MTR_2g072400 21.573 445 308 15 83 513 98 515 8.03e-16 80.5
MS.gene052854.t1 MTR_8g104030 27.869 244 154 7 249 480 8 241 1.07e-15 78.2
MS.gene052854.t1 MTR_1g091003 23.855 415 259 16 89 487 90 463 1.13e-15 80.1
MS.gene052854.t1 MTR_7g103450 26.587 252 170 6 236 483 241 481 1.23e-15 80.1
MS.gene052854.t1 MTR_4g113650 22.026 454 308 14 71 509 92 514 1.30e-15 79.7
MS.gene052854.t1 MTR_8g076290 22.374 438 300 16 42 464 38 450 1.79e-15 79.3
MS.gene052854.t1 MTR_5g034900 27.363 201 141 4 317 514 319 517 2.05e-15 79.3
MS.gene052854.t1 MTR_7g092600 21.472 326 213 8 184 493 188 486 2.12e-15 79.3
MS.gene052854.t1 MTR_2g072340 22.462 463 306 17 69 513 88 515 2.45e-15 79.0
MS.gene052854.t1 MTR_5g070700 26.587 252 166 6 245 484 225 469 2.56e-15 79.0
MS.gene052854.t1 MTR_6g084900 25.316 237 158 5 254 480 1 228 3.02e-15 76.6
MS.gene052854.t1 MTR_4g094775 23.504 468 307 17 42 493 35 467 3.16e-15 78.6
MS.gene052854.t1 MTR_1g069200 21.573 445 301 15 83 511 97 509 3.66e-15 78.6
MS.gene052854.t1 MTR_1g023730 22.785 474 315 16 42 490 35 482 4.06e-15 78.2
MS.gene052854.t1 MTR_5g070850 21.499 507 322 17 18 487 5 472 4.57e-15 78.2
MS.gene052854.t1 MTR_5g070710 24.066 241 170 4 245 477 224 459 5.16e-15 77.8
MS.gene052854.t1 MTR_4g062510 27.320 194 122 6 306 491 306 488 7.19e-15 77.4
MS.gene052854.t1 MTR_7g075610 24.403 377 239 13 133 490 125 474 7.21e-15 77.4
MS.gene052854.t1 MTR_4g088400 26.984 252 175 6 244 493 250 494 8.41e-15 77.4
MS.gene052854.t1 MTR_4g088425 26.190 252 178 5 244 493 233 478 8.90e-15 77.4
MS.gene052854.t1 MTR_3g025260 24.199 281 194 8 217 490 209 477 9.20e-15 77.0
MS.gene052854.t1 MTR_3g104560 30.392 204 133 5 315 515 205 402 1.16e-14 76.3
MS.gene052854.t1 MTR_7g012860 23.810 462 313 15 42 490 36 471 1.26e-14 76.6
MS.gene052854.t1 MTR_0287s0060 23.810 462 313 15 42 490 36 471 1.26e-14 76.6
MS.gene052854.t1 MTR_6g084770 26.016 246 164 7 249 484 233 470 1.26e-14 76.6
MS.gene052854.t1 MTR_0022s0290 24.752 404 248 16 116 490 111 487 1.59e-14 76.6
MS.gene052854.t1 MTR_0638s0020 23.333 330 220 9 169 487 90 397 1.64e-14 75.9
MS.gene052854.t1 MTR_2g010280 30.000 210 141 5 310 514 295 503 4.19e-14 75.1
MS.gene052854.t1 MTR_5g070840 31.206 141 96 1 344 484 1 140 6.16e-14 70.5
MS.gene052854.t1 MTR_3g104560 30.392 204 133 5 315 515 340 537 7.35e-14 74.3
MS.gene052854.t1 MTR_8g104100 30.612 196 110 6 302 487 50 229 8.44e-14 72.0
MS.gene052854.t1 MTR_2g450040 22.519 262 192 6 245 501 243 498 1.20e-13 73.6
MS.gene052854.t1 MTR_3g076530 21.992 482 329 17 18 483 17 467 1.31e-13 73.6
MS.gene052854.t1 MTR_4g104570 26.804 194 133 4 314 504 1 188 1.41e-13 70.1
MS.gene052854.t1 MTR_2g073480 24.359 234 167 6 261 494 165 388 1.76e-13 72.8
MS.gene052854.t1 MTR_4g095050 25.833 240 163 5 249 488 242 466 2.66e-13 72.4
MS.gene052854.t1 MTR_4g077210 25.551 227 157 7 244 468 235 451 2.93e-13 72.4
MS.gene052854.t1 MTR_3g058380 23.604 394 253 16 117 492 31 394 2.97e-13 72.0
MS.gene052854.t1 MTR_2g073440 24.359 234 167 6 261 494 232 455 3.04e-13 72.4
MS.gene052854.t1 MTR_3g058220 22.803 478 312 21 36 490 29 472 6.07e-13 71.6
MS.gene052854.t1 MTR_6g035115 24.935 385 225 18 118 483 122 461 6.75e-13 71.2
MS.gene052854.t1 MTR_3g436390 25.175 286 185 11 245 516 231 501 1.00e-12 70.9
MS.gene052854.t1 MTR_2g055430 22.350 349 234 11 178 513 193 517 1.00e-12 70.9
MS.gene052854.t1 MTR_2g437840 25.498 251 155 9 251 493 241 467 1.02e-12 70.9
MS.gene052854.t1 MTR_2g072260 21.684 475 312 20 64 513 71 510 1.35e-12 70.5
MS.gene052854.t1 MTR_2g072380 23.362 351 236 12 174 513 22 350 1.38e-12 69.3
MS.gene052854.t1 MTR_4g109470 22.979 470 278 21 48 479 40 463 1.55e-12 70.1
MS.gene052854.t1 MTR_5g091760 25.352 213 150 5 256 468 229 432 1.77e-12 70.1
MS.gene052854.t1 MTR_1g107295 24.865 185 133 4 306 490 307 485 1.79e-12 70.1
MS.gene052854.t1 MTR_2g072250 22.149 456 291 17 83 513 97 513 2.03e-12 69.7
MS.gene052854.t1 MTR_6g004570 36.190 105 54 4 254 345 1 105 2.07e-12 67.8
MS.gene052854.t1 MTR_5g095220 23.163 449 287 20 42 480 31 431 2.24e-12 69.7
MS.gene052854.t1 MTR_2g072380 23.362 351 236 12 174 513 162 490 2.30e-12 69.7
MS.gene052854.t1 MTR_7g056103 22.039 363 247 11 144 490 137 479 2.35e-12 69.7
MS.gene052854.t1 MTR_6g084090 62.791 43 16 0 291 333 8 50 2.54e-12 62.0
MS.gene052854.t1 MTR_6g084060 70.270 37 11 0 69 105 17 53 2.78e-12 62.0
MS.gene052854.t1 MTR_4g094772 22.059 476 328 13 26 493 18 458 2.90e-12 69.3
MS.gene052854.t1 MTR_1g035140 25.651 269 170 9 239 492 220 473 3.00e-12 69.3
MS.gene052854.t1 MTR_2g055470 22.701 348 232 11 179 513 194 517 3.41e-12 69.3
MS.gene052854.t1 MTR_5g470730 24.519 208 139 5 245 440 225 426 3.59e-12 68.6
MS.gene052854.t1 MTR_1g103670 21.212 363 252 11 131 483 123 461 4.07e-12 68.9
MS.gene052854.t1 MTR_5g007460 23.438 192 141 3 296 487 259 444 4.88e-12 68.6
MS.gene052854.t1 MTR_5g026520 25.172 290 192 9 242 514 227 508 5.37e-12 68.6
MS.gene052854.t1 MTR_3g057860 21.212 495 343 21 15 491 9 474 6.35e-12 68.2
MS.gene052854.t1 MTR_7g012330 23.326 463 312 17 42 490 37 470 8.02e-12 67.8
MS.gene052854.t1 MTR_1g031700 20.833 360 257 10 131 483 123 461 1.52e-11 67.0
MS.gene052854.t1 MTR_5g070973 26.380 163 116 3 347 509 4 162 1.60e-11 63.5
MS.gene052854.t1 MTR_8g046240 23.590 195 143 3 296 490 289 477 1.76e-11 67.0
MS.gene052854.t1 MTR_7g075540 23.097 381 236 14 133 490 125 471 1.78e-11 67.0
MS.gene052854.t1 MTR_2g072310 22.380 353 239 12 173 513 21 350 1.94e-11 65.9
MS.gene052854.t1 MTR_4g088170 20.466 386 256 12 134 496 128 485 2.82e-11 66.2
MS.gene052854.t1 MTR_3g057910 22.835 254 180 6 248 493 232 477 2.95e-11 66.2
MS.gene052854.t1 MTR_3g467200 24.324 259 177 6 249 494 260 512 3.73e-11 65.9
MS.gene052854.t1 MTR_1g037370 23.333 300 197 8 181 464 157 439 3.94e-11 65.9
MS.gene052854.t1 MTR_1g055325 21.351 370 266 11 131 494 143 493 5.43e-11 65.5
MS.gene052854.t1 MTR_5g095230 21.239 452 300 17 83 513 97 513 6.52e-11 65.1
MS.gene052854.t1 MTR_5g018990 22.000 400 259 15 106 484 102 469 6.86e-11 65.1
MS.gene052854.t1 MTR_2g073420 25.106 235 156 8 261 490 260 479 8.90e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052854.t1 AT4G32170 41.487 511 284 6 13 515 1 504 4.20e-145 426
MS.gene052854.t1 AT4G39500 41.634 514 283 5 11 515 12 517 1.09e-144 426
MS.gene052854.t1 AT4G39490 40.462 519 290 5 13 516 4 518 4.31e-143 422
MS.gene052854.t1 AT4G39500 43.038 474 254 4 51 515 1 467 2.44e-140 413
MS.gene052854.t1 AT2G23180 40.154 518 288 5 13 514 1 512 3.03e-139 412
MS.gene052854.t1 AT1G57750 38.627 510 293 6 13 515 1 497 5.25e-134 398
MS.gene052854.t1 AT2G21910 40.862 487 271 6 40 516 29 508 5.61e-134 398
MS.gene052854.t1 AT1G47620 38.388 521 299 6 11 515 2 516 5.83e-133 396
MS.gene052854.t1 AT4G39480 41.702 470 259 5 59 516 49 515 3.38e-132 394
MS.gene052854.t1 AT4G39510 38.911 514 296 6 11 515 2 506 1.88e-128 384
MS.gene052854.t1 AT5G08250 37.791 516 296 11 16 516 37 542 8.98e-121 365
MS.gene052854.t1 AT1G65340 37.945 477 278 4 45 513 36 502 1.21e-120 363
MS.gene052854.t1 AT5G52320 38.703 478 274 5 44 513 35 501 1.87e-120 363
MS.gene052854.t1 AT5G52320 38.266 473 273 5 44 508 35 496 8.07e-118 356
MS.gene052854.t1 AT5G23190 37.232 513 304 9 16 516 36 542 2.05e-117 357
MS.gene052854.t1 AT5G08250 38.557 485 274 10 47 516 5 480 2.10e-117 355
MS.gene052854.t1 AT5G02900 38.417 518 266 12 13 515 1 480 3.83e-116 351
MS.gene052854.t1 AT1G24540 35.944 498 305 5 27 514 27 520 1.24e-110 338
MS.gene052854.t1 AT1G57750 35.845 438 261 6 13 443 1 425 3.23e-101 311
MS.gene052854.t1 AT3G26125 33.535 495 302 7 43 516 46 534 3.33e-100 312
MS.gene052854.t1 AT4G00360 35.010 517 298 10 22 514 9 511 4.80e-100 312
MS.gene052854.t1 AT1G63710 34.971 509 310 9 20 514 6 507 2.08e-99 310
MS.gene052854.t1 AT2G45970 34.756 492 292 9 42 514 29 510 1.40e-96 303
MS.gene052854.t1 AT1G01600 34.638 511 310 10 22 514 9 513 1.73e-96 303
MS.gene052854.t1 AT1G13140 31.579 513 332 8 18 516 19 526 4.33e-94 296
MS.gene052854.t1 AT1G13150 32.515 489 309 8 42 516 38 519 1.17e-89 285
MS.gene052854.t1 AT1G13140 31.102 508 315 9 18 516 19 500 3.13e-89 283
MS.gene052854.t1 AT5G58860 32.941 510 316 8 20 514 10 508 1.32e-88 281
MS.gene052854.t1 AT3G56630 34.739 498 285 13 35 514 23 498 4.65e-88 280
MS.gene052854.t1 AT1G34540 33.719 519 295 13 23 514 1 497 5.42e-88 279
MS.gene052854.t1 AT2G45510 34.369 515 308 14 11 514 13 508 1.88e-84 270
MS.gene052854.t1 AT2G44890 33.855 511 310 13 11 507 5 501 4.83e-80 259
MS.gene052854.t1 AT2G44890 32.549 510 300 13 11 507 5 483 8.59e-76 247
MS.gene052854.t1 AT3G48520 32.880 441 267 8 86 515 78 500 3.62e-75 246
MS.gene052854.t1 AT2G27690 33.411 431 265 10 92 514 78 494 5.47e-74 243
MS.gene052854.t1 AT5G63450 31.871 433 273 7 90 514 84 502 1.26e-72 239
MS.gene052854.t1 AT5G63450 31.871 433 273 7 90 514 142 560 9.09e-72 239
MS.gene052854.t1 AT1G69500 29.685 539 328 13 13 515 1 524 3.87e-67 225
MS.gene052854.t1 AT3G01900 30.847 496 305 17 30 514 22 490 3.54e-66 222
MS.gene052854.t1 AT1G31800 26.754 456 297 16 73 515 139 570 7.47e-33 132
MS.gene052854.t1 AT5G51900 30.435 299 136 9 230 515 1 240 6.53e-31 120
MS.gene052854.t1 AT3G53130 23.326 463 309 16 70 514 105 539 1.90e-28 119
MS.gene052854.t1 AT5G24900 22.484 467 324 13 63 512 80 525 1.15e-23 104
MS.gene052854.t1 AT5G24900 23.131 428 295 12 98 512 2 408 2.46e-23 102
MS.gene052854.t1 AT4G15110 22.874 494 308 16 72 515 109 579 4.59e-23 103
MS.gene052854.t1 AT1G66030 30.178 169 102 2 13 172 1 162 8.56e-23 95.5
MS.gene052854.t1 AT2G26710 24.324 444 305 13 71 509 93 510 1.39e-21 98.6
MS.gene052854.t1 AT4G13310 23.504 468 312 14 42 493 35 472 5.60e-21 96.3
MS.gene052854.t1 AT5G38450 23.500 400 270 10 120 509 138 511 6.76e-21 96.3
MS.gene052854.t1 AT2G24180 26.329 414 265 15 103 507 109 491 1.08e-20 95.5
MS.gene052854.t1 AT5G52400 24.078 461 302 16 63 507 84 512 1.61e-20 95.1
MS.gene052854.t1 AT3G48270 23.195 457 298 14 42 483 34 452 2.65e-20 94.4
MS.gene052854.t1 AT3G14650 22.748 444 310 14 69 506 88 504 3.05e-20 94.4
MS.gene052854.t1 AT5G24910 22.851 477 315 19 63 514 84 532 3.19e-20 94.4
MS.gene052854.t1 AT3G14680 22.687 454 306 15 65 506 84 504 4.26e-20 94.0
MS.gene052854.t1 AT3G25180 23.904 502 308 17 23 488 15 478 6.18e-20 93.2
MS.gene052854.t1 AT1G64940 27.600 250 167 6 275 514 263 508 4.12e-19 90.9
MS.gene052854.t1 AT2G45580 25.788 349 233 11 156 495 151 482 7.30e-19 90.1
MS.gene052854.t1 AT3G48300 22.479 476 331 16 42 509 32 477 7.65e-19 89.7
MS.gene052854.t1 AT3G48300 22.479 476 331 16 42 509 34 479 7.72e-19 89.7
MS.gene052854.t1 AT3G61040 28.755 233 154 6 265 496 250 471 1.34e-18 89.0
MS.gene052854.t1 AT3G26830 23.029 482 333 12 13 480 1 458 1.40e-18 89.0
MS.gene052854.t1 AT4G13770 22.400 375 270 8 124 492 113 472 1.56e-18 89.0
MS.gene052854.t1 AT1G64950 27.490 251 168 5 274 514 261 507 3.11e-18 88.2
MS.gene052854.t1 AT4G27710 23.348 454 302 15 70 509 91 512 3.23e-18 88.2
MS.gene052854.t1 AT5G35715 26.284 331 224 9 151 474 74 391 8.55e-18 86.3
MS.gene052854.t1 AT4G13290 24.665 373 236 14 134 493 125 465 9.06e-18 86.7
MS.gene052854.t1 AT5G57260 26.260 377 237 16 134 493 122 474 1.06e-17 86.3
MS.gene052854.t1 AT3G14690 22.271 458 309 16 69 513 88 511 1.80e-17 85.9
MS.gene052854.t1 AT3G14690 22.271 458 309 16 69 513 123 546 1.83e-17 85.9
MS.gene052854.t1 AT4G31950 26.087 253 172 6 245 488 231 477 4.89e-17 84.3
MS.gene052854.t1 AT1G67110 24.619 394 264 13 121 509 140 505 4.89e-17 84.3
MS.gene052854.t1 AT3G14630 22.717 449 304 14 69 506 84 500 1.36e-16 82.8
MS.gene052854.t1 AT3G48280 21.856 485 323 18 22 489 13 458 1.57e-16 82.8
MS.gene052854.t1 AT3G14630 22.717 449 304 14 69 506 139 555 2.49e-16 82.4
MS.gene052854.t1 AT4G31940 26.210 248 169 5 249 488 248 489 3.37e-16 81.6
MS.gene052854.t1 AT1G13100 20.904 354 261 11 134 480 117 458 3.59e-16 81.6
MS.gene052854.t1 AT5G07990 22.857 490 332 19 22 490 9 473 4.08e-16 81.6
MS.gene052854.t1 AT5G25120 22.888 367 256 10 134 493 121 467 7.08e-16 80.5
MS.gene052854.t1 AT2G46950 21.308 474 316 13 51 509 134 565 7.65e-16 80.9
MS.gene052854.t1 AT1G33730 26.912 353 208 14 158 490 20 342 2.14e-15 78.2
MS.gene052854.t1 AT1G33730 26.912 353 208 14 158 490 20 342 2.14e-15 78.2
MS.gene052854.t1 AT2G12190 26.877 253 169 6 274 514 261 509 2.60e-15 79.0
MS.gene052854.t1 AT5G06900 22.481 258 181 5 235 487 222 465 2.72e-15 79.0
MS.gene052854.t1 AT4G31970 25.403 248 171 5 249 488 247 488 3.19e-15 78.6
MS.gene052854.t1 AT3G20940 25.523 239 156 7 265 493 259 485 3.61e-15 78.6
MS.gene052854.t1 AT5G25180 21.277 470 318 15 42 493 32 467 5.76e-15 77.8
MS.gene052854.t1 AT2G30770 24.490 245 172 4 249 490 233 467 8.99e-15 77.4
MS.gene052854.t1 AT3G26320 23.848 369 246 15 134 490 123 468 2.34e-14 75.9
MS.gene052854.t1 AT4G15350 23.741 278 188 7 251 516 239 504 2.78e-14 75.9
MS.gene052854.t1 AT3G20140 23.881 335 233 10 180 508 180 498 3.16e-14 75.5
MS.gene052854.t1 AT3G26300 25.519 337 220 13 169 493 154 471 3.55e-14 75.5
MS.gene052854.t1 AT5G24950 21.692 461 309 17 42 484 35 461 3.60e-14 75.5
MS.gene052854.t1 AT1G64930 25.847 236 165 6 285 514 277 508 5.88e-14 74.7
MS.gene052854.t1 AT3G26290 24.802 379 236 14 134 493 123 471 7.65e-14 74.3
MS.gene052854.t1 AT2G22330 24.280 243 175 5 249 488 269 505 7.94e-14 74.3
MS.gene052854.t1 AT3G26290 25.212 353 224 12 156 493 157 484 8.34e-14 74.3
MS.gene052854.t1 AT2G22330 24.280 243 175 5 249 488 292 528 9.54e-14 74.3
MS.gene052854.t1 AT1G74110 22.376 505 326 22 42 514 66 536 1.06e-13 73.9
MS.gene052854.t1 AT3G03470 30.769 182 119 3 317 493 306 485 1.24e-13 73.6
MS.gene052854.t1 AT3G61880 24.111 253 165 8 274 514 292 529 1.65e-13 73.6
MS.gene052854.t1 AT3G32047 22.312 372 239 12 106 470 131 459 1.67e-13 73.2
MS.gene052854.t1 AT3G61880 24.111 253 165 8 274 514 292 529 1.82e-13 73.2
MS.gene052854.t1 AT4G39950 24.390 246 175 6 249 490 307 545 1.86e-13 73.2
MS.gene052854.t1 AT4G39950 24.490 245 174 6 249 489 267 504 1.99e-13 73.2
MS.gene052854.t1 AT1G13090 22.133 375 249 14 104 464 97 442 2.83e-13 72.4
MS.gene052854.t1 AT4G12310 22.761 268 190 5 249 507 246 505 2.99e-13 72.4
MS.gene052854.t1 AT4G12320 22.857 280 201 6 234 507 233 503 4.01e-13 72.0
MS.gene052854.t1 AT1G33720 23.780 492 323 19 22 490 16 478 5.72e-13 71.6
MS.gene052854.t1 AT1G01190 26.667 240 153 9 287 514 308 536 8.26e-13 71.2
MS.gene052854.t1 AT1G01190 26.667 240 153 9 287 514 303 531 8.86e-13 71.2
MS.gene052854.t1 AT2G45560 26.829 205 144 4 286 490 280 478 1.38e-12 70.5
MS.gene052854.t1 AT1G33720 25.073 343 227 12 158 490 24 346 1.87e-12 69.3
MS.gene052854.t1 AT1G33720 25.073 343 227 12 158 490 24 346 1.87e-12 69.3
MS.gene052854.t1 AT1G33720 25.073 343 227 12 158 490 24 346 1.87e-12 69.3
MS.gene052854.t1 AT1G64900 28.112 249 168 6 272 515 263 505 1.92e-12 70.1
MS.gene052854.t1 AT5G42580 25.758 264 167 9 259 508 239 487 2.11e-12 69.7
MS.gene052854.t1 AT2G30750 26.339 224 156 4 271 490 249 467 2.75e-12 69.3
MS.gene052854.t1 AT3G20100 22.259 301 207 8 180 470 179 462 3.03e-12 69.3
MS.gene052854.t1 AT5G04330 23.047 256 172 7 249 490 231 475 3.77e-12 68.9
MS.gene052854.t1 AT5G25140 21.900 379 251 11 131 493 118 467 3.81e-12 68.9
MS.gene052854.t1 AT2G02580 25.234 321 216 11 180 493 168 471 4.96e-12 68.6
MS.gene052854.t1 AT3G26180 24.597 248 171 7 249 490 235 472 7.27e-12 68.2
MS.gene052854.t1 AT3G20950 19.830 353 239 9 150 493 171 488 8.62e-12 67.8
MS.gene052854.t1 AT2G42850 24.545 220 156 5 253 472 233 442 1.10e-11 67.4
MS.gene052854.t1 AT4G31500 20.743 323 238 4 173 490 160 469 1.17e-11 67.4
MS.gene052854.t1 AT1G50520 22.695 423 275 15 102 514 130 510 1.23e-11 67.4
MS.gene052854.t1 AT2G14100 23.810 294 208 9 180 470 181 461 1.85e-11 67.0
MS.gene052854.t1 AT2G46660 25.000 208 143 6 314 514 327 528 2.12e-11 66.6
MS.gene052854.t1 AT4G37330 21.809 376 239 10 97 468 113 437 2.52e-11 66.2
MS.gene052854.t1 AT1G28430 25.475 263 175 7 265 516 257 509 2.63e-11 66.2
MS.gene052854.t1 AT1G66540 25.000 240 153 9 251 484 66 284 2.65e-11 65.5
MS.gene052854.t1 AT3G20130 23.664 262 176 7 265 514 259 508 2.74e-11 66.2
MS.gene052854.t1 AT3G20130 23.664 262 176 7 265 514 231 480 2.75e-11 66.2
MS.gene052854.t1 AT1G66540 25.000 240 153 9 251 484 125 343 2.95e-11 65.9
MS.gene052854.t1 AT3G26280 21.983 464 303 17 42 480 52 481 3.45e-11 65.9
MS.gene052854.t1 AT3G26280 21.983 464 303 17 42 480 35 464 3.52e-11 65.9
MS.gene052854.t1 AT5G42590 22.312 493 334 17 15 490 7 467 3.92e-11 65.9
MS.gene052854.t1 AT3G28740 25.941 239 161 6 251 489 247 469 4.58e-11 65.5
MS.gene052854.t1 AT4G15380 23.849 239 169 6 282 514 273 504 5.40e-11 65.5

Find 110 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTCTTGAATAATTT+TGG 0.132514 1.4:-20283090 None:intergenic
TCCATGATGTTTCAAAATTA+AGG 0.163703 1.4:-20282268 None:intergenic
CCAATTATTGGCAAATTAAT+TGG 0.164337 1.4:-20282195 None:intergenic
CCAATTAATTTGCCAATAAT+TGG 0.178939 1.4:+20282195 MS.gene052854:CDS
AACTTGTTTGGAAGGCAATT+TGG 0.217196 1.4:-20282675 None:intergenic
CTTAATGATGTATCTGAAAT+AGG 0.218560 1.4:+20282576 MS.gene052854:CDS
TGGGAAGGGTGGAACAAATA+TGG 0.229153 1.4:+20283321 MS.gene052854:CDS
CACATCGCGAGCAAGAATTT+TGG 0.236313 1.4:+20282366 MS.gene052854:CDS
GGTTGTATGATCATGGAAAT+TGG 0.258893 1.4:-20282247 None:intergenic
GAGTACAGTAACCTTGTATT+TGG 0.262632 1.4:-20283287 None:intergenic
GCACTTGCTTTGCTCTTGTT+TGG 0.288326 1.4:-20282883 None:intergenic
CCCGGTAGCATACCAATTAT+TGG 0.291433 1.4:-20282207 None:intergenic
CTCAGCTCATTAAACTTGTT+TGG 0.291638 1.4:-20282687 None:intergenic
TCTTCCTATACATTTACTAT+TGG 0.293852 1.4:+20282148 MS.gene052854:CDS
ACCACCTTTATGTGAAATTT+CGG 0.304852 1.4:-20283509 None:intergenic
AGTATCTGCACTATTGCATT+TGG 0.325008 1.4:+20282645 MS.gene052854:CDS
GTTACCGAAATTTCACATAA+AGG 0.334159 1.4:+20283505 MS.gene052854:CDS
CAACTGAGACCTGTACTAAC+TGG 0.339063 1.4:-20283029 None:intergenic
TCCTCCAATACACTGAACTA+TGG 0.353135 1.4:-20282109 None:intergenic
TCCTTACCCATACAACTTCT+AGG 0.358842 1.4:-20283443 None:intergenic
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.4:+20282766 MS.gene052854:CDS
TTCACAAACACAAGCTTTAT+CGG 0.372541 1.4:+20282318 MS.gene052854:CDS
AAGTTCATTGCTTTCAATAC+AGG 0.381728 1.4:+20283419 MS.gene052854:CDS
CCTCATCTCTCGAAGGAATC+TGG 0.386685 1.4:-20283139 None:intergenic
ATTATCACCTCATCTATAAC+AGG 0.399453 1.4:-20282735 None:intergenic
GGGAAGGGTGGAACAAATAT+GGG 0.402854 1.4:+20283322 MS.gene052854:CDS
AAATTAAGGTTGTATGATCA+TGG 0.408212 1.4:-20282254 None:intergenic
TACAGGACCTAGAAGTTGTA+TGG 0.412532 1.4:+20283436 MS.gene052854:CDS
TGTTTCATTCATTTCTCAAA+AGG 0.413955 1.4:+20282487 MS.gene052854:CDS
GTGCAGCAGCAGTGAAGAAA+TGG 0.418405 1.4:+20282902 MS.gene052854:CDS
GCGATGTGGTCGACATTCAT+TGG 0.422408 1.4:-20282351 None:intergenic
GCCAATAATTGGTATGCTAC+CGG 0.424744 1.4:+20282206 MS.gene052854:CDS
GGAGGAACATTTCGATTTGA+AGG 0.425306 1.4:+20282288 MS.gene052854:CDS
TGAAGAACAAAAGAAAGCTT+CGG 0.425566 1.4:-20283551 None:intergenic
ACTGTACTCTTTGTACGCTA+TGG 0.429627 1.4:+20283301 MS.gene052854:CDS
TAGATGAGGTGATAATTTAC+CGG 0.429693 1.4:+20282742 MS.gene052854:CDS
GAAGAACAAAAGAAAGCTTC+GGG 0.432514 1.4:-20283550 None:intergenic
TCAGATACATCATTAAGAAA+TGG 0.437927 1.4:-20282570 None:intergenic
TCACATGAAACATGGCTTGA+AGG 0.439698 1.4:+20283571 MS.gene052854:CDS
CCAATAATTGGTATGCTACC+GGG 0.449780 1.4:+20282207 MS.gene052854:CDS
ATCTGGTTCTCCTCTTCTGT+GGG 0.459612 1.4:-20283122 None:intergenic
AATGCACATATATGCTCAAA+AGG 0.463763 1.4:-20283227 None:intergenic
TAAATTCTAATTCGCACGTA+TGG 0.466192 1.4:+20282448 MS.gene052854:CDS
GCTCATTAAACTTGTTTGGA+AGG 0.466990 1.4:-20282683 None:intergenic
CATCATTAAGAAATGGTAGT+AGG 0.468567 1.4:-20282563 None:intergenic
CTCTCTGATACCCATCTCTC+AGG 0.476597 1.4:-20283368 None:intergenic
TCACTGATGAAGGAAGAATC+TGG 0.480025 1.4:+20282939 MS.gene052854:CDS
ACCTAGAAGTTGTATGGGTA+AGG 0.489801 1.4:+20283442 MS.gene052854:CDS
ATGTCCATAGTTCAGTGTAT+TGG 0.490091 1.4:+20282105 MS.gene052854:CDS
AATAGGTGCTCAGGTGGACC+TGG 0.491109 1.4:+20282593 MS.gene052854:CDS
AATGTATAGGAAGATTAGTA+TGG 0.491124 1.4:-20282139 None:intergenic
CTGTACTCTTTGTACGCTAT+GGG 0.491458 1.4:+20283302 MS.gene052854:CDS
AATCTGGTTCTCCTCTTCTG+TGG 0.495540 1.4:-20283123 None:intergenic
CTCGCCACTAGGTAGTATAT+CGG 0.503066 1.4:-20283255 None:intergenic
TCCATAGTTCAGTGTATTGG+AGG 0.503198 1.4:+20282108 MS.gene052854:CDS
CTTTGTGAAATCACTGATGA+AGG 0.511368 1.4:+20282929 MS.gene052854:CDS
GTCTCCAATAGTAAATGTAT+AGG 0.514329 1.4:-20282152 None:intergenic
ATGAAGGAAGAATCTGGAAA+GGG 0.514653 1.4:+20282945 MS.gene052854:CDS
GTCGACATTCATTGGATCAC+TGG 0.515263 1.4:-20282343 None:intergenic
CAGTTAGTACAGGTCTCAGT+TGG 0.519187 1.4:+20283030 MS.gene052854:CDS
GGAATTTAAGCCTGAGAGAT+GGG 0.521678 1.4:+20283358 MS.gene052854:CDS
TTCAAGAAATCAAAGATCAC+TGG 0.522686 1.4:+20283099 MS.gene052854:CDS
CAAAATTCTTGCTCGCGATG+TGG 0.528826 1.4:-20282365 None:intergenic
CATATATGCTCAAAAGGTAC+AGG 0.535622 1.4:-20283221 None:intergenic
AAGCTTCATTCAAATGAAGA+TGG 0.536138 1.4:+20283469 MS.gene052854:CDS
GAAATTTCACATAAAGGTGG+TGG 0.536525 1.4:+20283511 MS.gene052854:CDS
TGGAATTTAAGCCTGAGAGA+TGG 0.546234 1.4:+20283357 MS.gene052854:CDS
CTCTTTGTACGCTATGGGAA+GGG 0.546966 1.4:+20283307 MS.gene052854:CDS
CATTTCGATTTGAAGGAGCA+TGG 0.551153 1.4:+20282295 MS.gene052854:CDS
ACCTACTCAAGGCATCCTCC+AGG 0.551378 1.4:-20282611 None:intergenic
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.4:-20282761 None:intergenic
AAAGCAATGAACTTGTAAGA+TGG 0.552050 1.4:-20283410 None:intergenic
GGACTAACACGCTCGCCACT+AGG 0.554991 1.4:-20283266 None:intergenic
GACAGGTGACGCAAAAGCCC+CGG 0.558091 1.4:-20282225 None:intergenic
TGTATCTGAAATAGGTGCTC+AGG 0.559444 1.4:+20282584 MS.gene052854:CDS
AACTGAGACCTGTACTAACT+GGG 0.561483 1.4:-20283028 None:intergenic
TATGATCATGGAAATTGGAC+AGG 0.567855 1.4:-20282242 None:intergenic
GGAAATGGCCCAGTTAGTAC+AGG 0.569566 1.4:+20283020 MS.gene052854:CDS
ATCTCTTCCTGTTATAGATG+AGG 0.572397 1.4:+20282728 MS.gene052854:CDS
ATCTGAAATAGGTGCTCAGG+TGG 0.576147 1.4:+20282587 MS.gene052854:CDS
AGATCACTGGCCCACAGAAG+AGG 0.581204 1.4:+20283112 MS.gene052854:CDS
GAAGGAAGAATCTGGAAAGG+GGG 0.584722 1.4:+20282947 MS.gene052854:CDS
TTTGTTCTTCACATGAAACA+TGG 0.588468 1.4:+20283563 MS.gene052854:CDS
CCAGATTCCTTCGAGAGATG+AGG 0.595129 1.4:+20283139 MS.gene052854:CDS
ACAGGACCTAGAAGTTGTAT+GGG 0.597811 1.4:+20283437 MS.gene052854:CDS
AAGAAAGCTTCGGGATTACA+CGG 0.598817 1.4:-20283541 None:intergenic
ACTCTTTGTACGCTATGGGA+AGG 0.604016 1.4:+20283306 MS.gene052854:CDS
GATAAGCTAGTGTACCTCCA+TGG 0.604777 1.4:+20283167 MS.gene052854:CDS
AGGCTTCACATATAGCTCCA+TGG 0.605170 1.4:-20283184 None:intergenic
TTTCACATAAAGGTGGTGGA+AGG 0.605673 1.4:+20283515 MS.gene052854:CDS
CAATAATTGGTATGCTACCG+GGG 0.609852 1.4:+20282208 MS.gene052854:CDS
GGAAGGGTGGAACAAATATG+GGG 0.613393 1.4:+20283323 MS.gene052854:CDS
GAGAGATGGGTATCAGAGAG+AGG 0.617792 1.4:+20283371 MS.gene052854:CDS
GATGAAGGAAGAATCTGGAA+AGG 0.619393 1.4:+20282944 MS.gene052854:CDS
ATCAAAAGTGAACCTACTCA+AGG 0.623089 1.4:-20282622 None:intergenic
ACCTGGAGGATGCCTTGAGT+AGG 0.627785 1.4:+20282610 MS.gene052854:CDS
ACCGAAATTTCACATAAAGG+TGG 0.633013 1.4:+20283508 MS.gene052854:CDS
TACAGGAGGATAAAGTCTCA+AGG 0.637791 1.4:-20283204 None:intergenic
TCAAGATCCTCATCTCTCGA+AGG 0.639304 1.4:-20283146 None:intergenic
AGCGTGTTAGTCCAAATACA+AGG 0.641188 1.4:+20283276 MS.gene052854:CDS
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.4:-20283218 None:intergenic
AGGTGCTCAGGTGGACCTGG+AGG 0.643711 1.4:+20282596 MS.gene052854:CDS
TGAAGGAAGAATCTGGAAAG+GGG 0.645306 1.4:+20282946 MS.gene052854:CDS
TTTGTACGCTATGGGAAGGG+TGG 0.648912 1.4:+20283310 MS.gene052854:CDS
AATATGGGGAGAATACTGCA+TGG 0.665351 1.4:+20283337 MS.gene052854:CDS
ACTTTCTTTCTTGACCAACG+TGG 0.670424 1.4:-20282806 None:intergenic
AAATCCGATATACTACCTAG+TGG 0.710554 1.4:+20283251 MS.gene052854:CDS
CGCACGTATGGAAACAACAG+AGG 0.713616 1.4:+20282460 MS.gene052854:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.4:-20282774 None:intergenic
CTTCACATATAGCTCCATGG+AGG 0.770653 1.4:-20283181 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGAAATTTTTGATTTTTT+TGG + chr1.4:20282414-20282433 MS.gene052854:CDS 10.0%
!!! TTTGATTTCTTGAATAATTT+TGG - chr1.4:20283093-20283112 None:intergenic 15.0%
!!! ATCAAAAATTTCTTTGAAGT+TGG - chr1.4:20282409-20282428 None:intergenic 20.0%
!!! ATTTTTGATTTTTTTGGAGA+TGG + chr1.4:20282420-20282439 MS.gene052854:CDS 20.0%
! AAATTAAGGTTGTATGATCA+TGG - chr1.4:20282257-20282276 None:intergenic 25.0%
! AATGTATAGGAAGATTAGTA+TGG - chr1.4:20282142-20282161 None:intergenic 25.0%
! ACAAAGTATGAAGAAAAAGT+TGG + chr1.4:20282533-20282552 MS.gene052854:CDS 25.0%
! CCAATTATTGGCAAATTAAT+TGG - chr1.4:20282198-20282217 None:intergenic 25.0%
! TCAGATACATCATTAAGAAA+TGG - chr1.4:20282573-20282592 None:intergenic 25.0%
! TCCATGATGTTTCAAAATTA+AGG - chr1.4:20282271-20282290 None:intergenic 25.0%
! TCTTCCTATACATTTACTAT+TGG + chr1.4:20282148-20282167 MS.gene052854:CDS 25.0%
! TGTTTCATTCATTTCTCAAA+AGG + chr1.4:20282487-20282506 MS.gene052854:CDS 25.0%
!! CTTAATGATGTATCTGAAAT+AGG + chr1.4:20282576-20282595 MS.gene052854:CDS 25.0%
!!! ACCTTAATTTTGAAACATCA+TGG + chr1.4:20282267-20282286 MS.gene052854:CDS 25.0%
!!! ACTTTTTCTTCATACTTTGT+TGG - chr1.4:20282533-20282552 None:intergenic 25.0%
!!! ATAATTTTGGCTTCTACAAT+AGG - chr1.4:20283080-20283099 None:intergenic 25.0%
!!! CCAATTAATTTGCCAATAAT+TGG + chr1.4:20282195-20282214 MS.gene052854:CDS 25.0%
!!! GAAACTGTCAAGATTTTTTT+CGG - chr1.4:20282841-20282860 None:intergenic 25.0%
!!! TTAATTTTGAAACATCATGG+AGG + chr1.4:20282270-20282289 MS.gene052854:CDS 25.0%
AAAGCAATGAACTTGTAAGA+TGG - chr1.4:20283413-20283432 None:intergenic 30.0%
AAGCTTCATTCAAATGAAGA+TGG + chr1.4:20283469-20283488 MS.gene052854:CDS 30.0%
AAGTTCATTGCTTTCAATAC+AGG + chr1.4:20283419-20283438 MS.gene052854:CDS 30.0%
AATGCACATATATGCTCAAA+AGG - chr1.4:20283230-20283249 None:intergenic 30.0%
ACCACCTTTATGTGAAATTT+CGG - chr1.4:20283512-20283531 None:intergenic 30.0%
ATTATCACCTCATCTATAAC+AGG - chr1.4:20282738-20282757 None:intergenic 30.0%
CATCATTAAGAAATGGTAGT+AGG - chr1.4:20282566-20282585 None:intergenic 30.0%
GTCTCCAATAGTAAATGTAT+AGG - chr1.4:20282155-20282174 None:intergenic 30.0%
GTTACCGAAATTTCACATAA+AGG + chr1.4:20283505-20283524 MS.gene052854:CDS 30.0%
TAAATTCTAATTCGCACGTA+TGG + chr1.4:20282448-20282467 MS.gene052854:CDS 30.0%
TAGATGAGGTGATAATTTAC+CGG + chr1.4:20282742-20282761 MS.gene052854:CDS 30.0%
TGAAGAACAAAAGAAAGCTT+CGG - chr1.4:20283554-20283573 None:intergenic 30.0%
TTCAAGAAATCAAAGATCAC+TGG + chr1.4:20283099-20283118 MS.gene052854:CDS 30.0%
TTGTTGGAAAAAGTTCTTGA+AGG - chr1.4:20282517-20282536 None:intergenic 30.0%
TTTGTTCTTCACATGAAACA+TGG + chr1.4:20283563-20283582 MS.gene052854:CDS 30.0%
! TTCACAAACACAAGCTTTAT+CGG + chr1.4:20282318-20282337 MS.gene052854:CDS 30.0%
AAATCCGATATACTACCTAG+TGG + chr1.4:20283251-20283270 MS.gene052854:CDS 35.0%
ACCGAAATTTCACATAAAGG+TGG + chr1.4:20283508-20283527 MS.gene052854:CDS 35.0%
AGTATCTGCACTATTGCATT+TGG + chr1.4:20282645-20282664 MS.gene052854:CDS 35.0%
ATCAAAAGTGAACCTACTCA+AGG - chr1.4:20282625-20282644 None:intergenic 35.0%
ATCTCTTCCTGTTATAGATG+AGG + chr1.4:20282728-20282747 MS.gene052854:CDS 35.0%
ATGAAGGAAGAATCTGGAAA+GGG + chr1.4:20282945-20282964 MS.gene052854:CDS 35.0%
ATGTCCATAGTTCAGTGTAT+TGG + chr1.4:20282105-20282124 MS.gene052854:CDS 35.0%
CTTTGTGAAATCACTGATGA+AGG + chr1.4:20282929-20282948 MS.gene052854:CDS 35.0%
GAAATTTCACATAAAGGTGG+TGG + chr1.4:20283511-20283530 MS.gene052854:CDS 35.0%
GAAGAACAAAAGAAAGCTTC+GGG - chr1.4:20283553-20283572 None:intergenic 35.0%
GAGTACAGTAACCTTGTATT+TGG - chr1.4:20283290-20283309 None:intergenic 35.0%
GGTTGTATGATCATGGAAAT+TGG - chr1.4:20282250-20282269 None:intergenic 35.0%
TATGATCATGGAAATTGGAC+AGG - chr1.4:20282245-20282264 None:intergenic 35.0%
! AACTTGTTTGGAAGGCAATT+TGG - chr1.4:20282678-20282697 None:intergenic 35.0%
! CATATATGCTCAAAAGGTAC+AGG - chr1.4:20283224-20283243 None:intergenic 35.0%
! CTCAGCTCATTAAACTTGTT+TGG - chr1.4:20282690-20282709 None:intergenic 35.0%
! GCTCATTAAACTTGTTTGGA+AGG - chr1.4:20282686-20282705 None:intergenic 35.0%
!! AATTTTGGCAACTATGGAAG+GGG + chr1.4:20282381-20282400 MS.gene052854:CDS 35.0%
!! ACTCTCTTTTTAGCAGGAAA+TGG + chr1.4:20283005-20283024 MS.gene052854:CDS 35.0%
!! AGAATTTTGGCAACTATGGA+AGG + chr1.4:20282379-20282398 MS.gene052854:CDS 35.0%
!! AGCAAGAATTTTGGCAACTA+TGG + chr1.4:20282375-20282394 MS.gene052854:CDS 35.0%
!! GAATTTTGGCAACTATGGAA+GGG + chr1.4:20282380-20282399 MS.gene052854:CDS 35.0%
AACTGAGACCTGTACTAACT+GGG - chr1.4:20283031-20283050 None:intergenic 40.0%
AAGAAAGCTTCGGGATTACA+CGG - chr1.4:20283544-20283563 None:intergenic 40.0%
AATATGGGGAGAATACTGCA+TGG + chr1.4:20283337-20283356 MS.gene052854:CDS 40.0%
ACAGGACCTAGAAGTTGTAT+GGG + chr1.4:20283437-20283456 MS.gene052854:CDS 40.0%
ACCTAGAAGTTGTATGGGTA+AGG + chr1.4:20283442-20283461 MS.gene052854:CDS 40.0%
ACTGTACTCTTTGTACGCTA+TGG + chr1.4:20283301-20283320 MS.gene052854:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG + chr1.4:20282766-20282785 MS.gene052854:CDS 40.0%
ACTTTCTTTCTTGACCAACG+TGG - chr1.4:20282809-20282828 None:intergenic 40.0%
AGCGTGTTAGTCCAAATACA+AGG + chr1.4:20283276-20283295 MS.gene052854:CDS 40.0%
CAATAATTGGTATGCTACCG+GGG + chr1.4:20282208-20282227 MS.gene052854:CDS 40.0%
CCAATAATTGGTATGCTACC+GGG + chr1.4:20282207-20282226 MS.gene052854:CDS 40.0%
CTGTACTCTTTGTACGCTAT+GGG + chr1.4:20283302-20283321 MS.gene052854:CDS 40.0%
GATGAAGGAAGAATCTGGAA+AGG + chr1.4:20282944-20282963 MS.gene052854:CDS 40.0%
GCCAATAATTGGTATGCTAC+CGG + chr1.4:20282206-20282225 MS.gene052854:CDS 40.0%
GGAATTTAAGCCTGAGAGAT+GGG + chr1.4:20283358-20283377 MS.gene052854:CDS 40.0%
GTCTATGGAAGCTGCAAAAA+TGG + chr1.4:20282781-20282800 MS.gene052854:CDS 40.0%
TACAGGACCTAGAAGTTGTA+TGG + chr1.4:20283436-20283455 MS.gene052854:CDS 40.0%
TACAGGAGGATAAAGTCTCA+AGG - chr1.4:20283207-20283226 None:intergenic 40.0%
TCACATGAAACATGGCTTGA+AGG + chr1.4:20283571-20283590 MS.gene052854:CDS 40.0%
TCACTGATGAAGGAAGAATC+TGG + chr1.4:20282939-20282958 MS.gene052854:CDS 40.0%
TCCATAGTTCAGTGTATTGG+AGG + chr1.4:20282108-20282127 MS.gene052854:CDS 40.0%
TCCTCCAATACACTGAACTA+TGG - chr1.4:20282112-20282131 None:intergenic 40.0%
TCCTTACCCATACAACTTCT+AGG - chr1.4:20283446-20283465 None:intergenic 40.0%
TGAAGGAAGAATCTGGAAAG+GGG + chr1.4:20282946-20282965 MS.gene052854:CDS 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.4:20283357-20283376 MS.gene052854:CDS 40.0%
! ATATGCTCAAAAGGTACAGG+AGG - chr1.4:20283221-20283240 None:intergenic 40.0%
! CATTTCGATTTGAAGGAGCA+TGG + chr1.4:20282295-20282314 MS.gene052854:CDS 40.0%
! GGAGGAACATTTCGATTTGA+AGG + chr1.4:20282288-20282307 MS.gene052854:CDS 40.0%
! TGTATCTGAAATAGGTGCTC+AGG + chr1.4:20282584-20282603 MS.gene052854:CDS 40.0%
!! ATTTTGGCAACTATGGAAGG+GGG + chr1.4:20282382-20282401 MS.gene052854:CDS 40.0%
!! GTACTCACTCTCTTTTTAGC+AGG + chr1.4:20282999-20283018 MS.gene052854:CDS 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG + chr1.4:20283515-20283534 MS.gene052854:CDS 40.0%
ACTCTTTGTACGCTATGGGA+AGG + chr1.4:20283306-20283325 MS.gene052854:CDS 45.0%
AGGCTTCACATATAGCTCCA+TGG - chr1.4:20283187-20283206 None:intergenic 45.0%
CAAAATTCTTGCTCGCGATG+TGG - chr1.4:20282368-20282387 None:intergenic 45.0%
CAACTGAGACCTGTACTAAC+TGG - chr1.4:20283032-20283051 None:intergenic 45.0%
CAGTTAGTACAGGTCTCAGT+TGG + chr1.4:20283030-20283049 MS.gene052854:CDS 45.0%
CCCGGTAGCATACCAATTAT+TGG - chr1.4:20282210-20282229 None:intergenic 45.0%
CTCGCCACTAGGTAGTATAT+CGG - chr1.4:20283258-20283277 None:intergenic 45.0%
CTCTTTGTACGCTATGGGAA+GGG + chr1.4:20283307-20283326 MS.gene052854:CDS 45.0%
CTTCACATATAGCTCCATGG+AGG - chr1.4:20283184-20283203 None:intergenic 45.0%
GAAGGAAGAATCTGGAAAGG+GGG + chr1.4:20282947-20282966 MS.gene052854:CDS 45.0%
GATAAGCTAGTGTACCTCCA+TGG + chr1.4:20283167-20283186 MS.gene052854:CDS 45.0%
GCACTTGCTTTGCTCTTGTT+TGG - chr1.4:20282886-20282905 None:intergenic 45.0%
GGAAGGGTGGAACAAATATG+GGG + chr1.4:20283323-20283342 MS.gene052854:CDS 45.0%
GGGAAGGGTGGAACAAATAT+GGG + chr1.4:20283322-20283341 MS.gene052854:CDS 45.0%
GTCGACATTCATTGGATCAC+TGG - chr1.4:20282346-20282365 None:intergenic 45.0%
TCAAGATCCTCATCTCTCGA+AGG - chr1.4:20283149-20283168 None:intergenic 45.0%
TGGGAAGGGTGGAACAAATA+TGG + chr1.4:20283321-20283340 MS.gene052854:CDS 45.0%
! ATCTGAAATAGGTGCTCAGG+TGG + chr1.4:20282587-20282606 MS.gene052854:CDS 45.0%
! CACATCGCGAGCAAGAATTT+TGG + chr1.4:20282366-20282385 MS.gene052854:CDS 45.0%
!! AATCTGGTTCTCCTCTTCTG+TGG - chr1.4:20283126-20283145 None:intergenic 45.0%
!! ATCTGGTTCTCCTCTTCTGT+GGG - chr1.4:20283125-20283144 None:intergenic 45.0%
!!! CAGGTCTCAGTTGGTTTTTC+TGG + chr1.4:20283039-20283058 MS.gene052854:CDS 45.0%
CCAGATTCCTTCGAGAGATG+AGG + chr1.4:20283139-20283158 MS.gene052854:CDS 50.0%
CCTCATCTCTCGAAGGAATC+TGG - chr1.4:20283142-20283161 None:intergenic 50.0%
CGCACGTATGGAAACAACAG+AGG + chr1.4:20282460-20282479 MS.gene052854:CDS 50.0%
CTCTCTGATACCCATCTCTC+AGG - chr1.4:20283371-20283390 None:intergenic 50.0%
CTGCAAAAATGGCTCCACGT+TGG + chr1.4:20282792-20282811 MS.gene052854:CDS 50.0%
GACAACGTGGTATGAAGTGC+CGG - chr1.4:20282764-20282783 None:intergenic 50.0%
GAGAGATGGGTATCAGAGAG+AGG + chr1.4:20283371-20283390 MS.gene052854:CDS 50.0%
GCGATGTGGTCGACATTCAT+TGG - chr1.4:20282354-20282373 None:intergenic 50.0%
GGAAATGGCCCAGTTAGTAC+AGG + chr1.4:20283020-20283039 MS.gene052854:CDS 50.0%
GTGCAGCAGCAGTGAAGAAA+TGG + chr1.4:20282902-20282921 MS.gene052854:CDS 50.0%
TGCAGCTTCCATAGACAACG+TGG - chr1.4:20282777-20282796 None:intergenic 50.0%
TTTGTACGCTATGGGAAGGG+TGG + chr1.4:20283310-20283329 MS.gene052854:CDS 50.0%
AATAGGTGCTCAGGTGGACC+TGG + chr1.4:20282593-20282612 MS.gene052854:CDS 55.0%
ACCTGGAGGATGCCTTGAGT+AGG + chr1.4:20282610-20282629 MS.gene052854:CDS 55.0%
AGATCACTGGCCCACAGAAG+AGG + chr1.4:20283112-20283131 MS.gene052854:CDS 55.0%
! ACCTACTCAAGGCATCCTCC+AGG - chr1.4:20282614-20282633 None:intergenic 55.0%
GACAGGTGACGCAAAAGCCC+CGG - chr1.4:20282228-20282247 None:intergenic 60.0%
GGACTAACACGCTCGCCACT+AGG - chr1.4:20283269-20283288 None:intergenic 60.0%
AGGTGCTCAGGTGGACCTGG+AGG + chr1.4:20282596-20282615 MS.gene052854:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 20282069 20283619 20282069 ID=MS.gene052854
chr1.4 mRNA 20282069 20283619 20282069 ID=MS.gene052854.t1;Parent=MS.gene052854
chr1.4 exon 20282069 20283619 20282069 ID=MS.gene052854.t1.exon1;Parent=MS.gene052854.t1
chr1.4 CDS 20282069 20283619 20282069 ID=cds.MS.gene052854.t1;Parent=MS.gene052854.t1
Gene Sequence

>MS.gene052854

ATGCATTTCGAAAACACATACTTCAGTAAATCTACAATGTCCATAGTTCAGTGTATTGGAGGATTTCTAGCCATACTAATCTTCCTATACATTTACTATTGGAGACGCAATAGAGATGAATTTGCACCAATTAATTTGCCAATAATTGGTATGCTACCGGGGCTTTTGCGTCACCTGTCCAATTTCCATGATCATACAACCTTAATTTTGAAACATCATGGAGGAACATTTCGATTTGAAGGAGCATGGTTCACAAACACAAGCTTTATCGGTACCAGTGATCCAATGAATGTCGACCACATCGCGAGCAAGAATTTTGGCAACTATGGAAGGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAATTCGCACGTATGGAAACAACAGAGGACGATGTTTCATTCATTTCTCAAAAGGAAAACCTTCAAGAACTTTTTCCAACAAAGTATGAAGAAAAAGTTGGAGAACTGCCTACTACCATTTCTTAATGATGTATCTGAAATAGGTGCTCAGGTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGATAGTATCTGCACTATTGCATTTGGATTTGATCCAAATTGCCTTCCAAACAAGTTTAATGAGCTGAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCCACGTTGGTCAAGAAAGAAAGTTAAAAGAAGCCGAAAAAAATCTTGACAGTTTCTTGTATGAAAGTATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATAACTTTGTGAAATCACTGATGAAGGAAGAATCTGGAAAGGGGGAAATCGACGAGAAGTATCTTAGAGACAATGTACTCACTCTCTTTTTAGCAGGAAATGGCCCAGTTAGTACAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTAGAAGCCAAAATTATTCAAGAAATCAAAGATCACTGGCCCACAGAAGAGGAGAACCAGATTCCTTCGAGAGATGAGGATCTTGATAAGCTAGTGTACCTCCATGGAGCTATATGTGAAGCCTTGAGACTTTATCCTCCTGTACCTTTTGAGCATATATGTGCATTCAAATCCGATATACTACCTAGTGGCGAGCGTGTTAGTCCAAATACAAGGTTACTGTACTCTTTGTACGCTATGGGAAGGGTGGAACAAATATGGGGAGAATACTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGAGAGGAAACACTATACATGTACCATCTTACAAGTTCATTGCTTTCAATACAGGACCTAGAAGTTGTATGGGTAAGGATATAAGCTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACCGAAATTTCACATAAAGGTGGTGGAAGGTCACCGTGTAATCCCGAAGCTTTCTTTTGTTCTTCACATGAAACATGGCTTGAAGGTTAAAGTCACTAAAAGATGCATTTGA

Protein sequence

>MS.gene052854.t1

MHFENTYFSKSTMSIVQCIGGFLAILIFLYIYYWRRNRDEFAPINLPIIGMLPGLLRHLSNFHDHTTLILKHHGGTFRFEGAWFTNTSFIGTSDPMNVDHIASKNFGNYGRGSNFKEIFDFFGDGILNSNSHVWKQQRTMFHSFLKRKTFKNFFQQSMKKKLENCLLPFLNDVSEIGAQVDLEDALSRFTFDSICTIAFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFIPRCLWKLQKWLHVGQERKLKEAEKNLDSFLYESITFSKQEQSKCSSSEEMDNFVKSLMKEESGKGEIDEKYLRDNVLTLFLAGNGPVSTGLSWFFWLVSTHPIVEAKIIQEIKDHWPTEEENQIPSRDEDLDKLVYLHGAICEALRLYPPVPFEHICAFKSDILPSGERVSPNTRLLYSLYAMGRVEQIWGEYCMEFKPERWVSERGNTIHVPSYKFIAFNTGPRSCMGKDISFIQMKMVAAALLPKFHIKVVEGHRVIPKLSFVLHMKHGLKVKVTKRCI