AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30256


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30256.t1 MTR_7g033580 94.153 496 29 0 1 496 1 496 0.0 972
MS.gene30256.t1 MTR_7g033570 84.879 496 75 0 1 496 1 496 0.0 890
MS.gene30256.t1 MTR_8g088470 81.557 488 89 1 9 495 5 492 0.0 842
MS.gene30256.t1 MTR_1g035670 53.924 497 217 5 10 496 10 504 0.0 564
MS.gene30256.t1 MTR_6g004670 55.842 505 212 5 1 494 1 505 0.0 564
MS.gene30256.t1 MTR_1g036130 53.200 500 220 6 10 496 10 508 0.0 553
MS.gene30256.t1 MTR_6g004630 53.557 506 222 5 3 496 1 505 0.0 550
MS.gene30256.t1 MTR_6g004590 51.976 506 223 6 9 496 14 517 0.0 544
MS.gene30256.t1 MTR_1g035790 52.475 505 230 5 1 496 1 504 0.0 542
MS.gene30256.t1 MTR_1g035750 52.259 509 228 3 1 496 1 507 0.0 537
MS.gene30256.t1 MTR_1g035760 51.717 495 208 6 10 496 10 481 0.0 535
MS.gene30256.t1 MTR_1g036200 52.475 505 225 7 3 496 1 501 0.0 532
MS.gene30256.t1 MTR_6g004600 51.089 505 227 5 10 496 15 517 0.0 532
MS.gene30256.t1 MTR_6g004610 55.076 463 200 4 38 493 1 462 0.0 527
MS.gene30256.t1 MTR_1g035800 51.367 512 231 6 1 494 1 512 0.0 526
MS.gene30256.t1 MTR_1g035580 52.684 503 209 8 10 496 9 498 0.0 525
MS.gene30256.t1 MTR_1g035830 50.398 502 232 6 10 496 10 509 0.0 518
MS.gene30256.t1 MTR_1g036270 50.389 514 236 6 1 496 1 513 3.51e-180 515
MS.gene30256.t1 MTR_1g050362 51.277 509 228 8 3 494 1 506 8.14e-179 511
MS.gene30256.t1 MTR_1g036010 49.203 502 238 6 10 496 10 509 9.92e-179 511
MS.gene30256.t1 MTR_1g035940 47.705 501 247 5 10 496 10 509 2.03e-171 493
MS.gene30256.t1 MTR_1g035860 47.597 437 219 4 9 436 15 450 1.21e-149 437
MS.gene30256.t1 MTR_1g069715 50.490 408 185 5 83 475 1 406 3.34e-144 429
MS.gene30256.t1 MTR_4g012320 81.333 225 42 0 272 496 1 225 1.97e-134 388
MS.gene30256.t1 MTR_4g075110 39.484 504 289 5 6 494 47 549 1.78e-132 395
MS.gene30256.t1 MTR_1g037550 39.069 494 282 4 20 494 54 547 3.27e-131 392
MS.gene30256.t1 MTR_1g037560 40.657 487 274 5 23 494 57 543 4.51e-131 391
MS.gene30256.t1 MTR_8g030590 40.289 484 265 9 33 496 33 512 9.74e-117 354
MS.gene30256.t1 MTR_5g070010 38.125 480 278 7 33 496 34 510 6.71e-112 341
MS.gene30256.t1 MTR_8g098435 39.167 480 271 9 33 496 33 507 3.87e-109 334
MS.gene30256.t1 MTR_3g463060 37.107 477 274 8 34 496 40 504 1.08e-103 320
MS.gene30256.t1 MTR_5g019140 33.712 528 303 12 3 495 16 531 8.78e-87 276
MS.gene30256.t1 MTR_7g088330 34.861 502 303 11 9 494 15 508 5.09e-86 274
MS.gene30256.t1 MTR_4g119660 33.524 525 308 12 3 495 1 516 9.96e-86 273
MS.gene30256.t1 MTR_3g080580 33.735 498 298 12 19 494 30 517 2.43e-84 270
MS.gene30256.t1 MTR_1g070365 33.529 510 306 12 4 494 9 504 2.24e-83 267
MS.gene30256.t1 MTR_7g029275 33.333 501 310 9 9 494 17 508 1.05e-82 265
MS.gene30256.t1 MTR_1g060550 37.647 425 249 9 79 494 95 512 2.35e-82 265
MS.gene30256.t1 MTR_7g096340 33.879 428 263 9 77 494 85 502 3.62e-81 261
MS.gene30256.t1 MTR_7g096320 33.958 427 264 8 77 494 86 503 1.79e-80 259
MS.gene30256.t1 MTR_1g070345 32.874 508 300 13 11 495 16 505 2.03e-80 259
MS.gene30256.t1 MTR_8g035780 33.613 476 293 11 34 494 43 510 1.41e-79 257
MS.gene30256.t1 MTR_8g035860 33.202 509 314 13 5 495 10 510 2.45e-79 256
MS.gene30256.t1 MTR_8g035820 32.008 503 316 13 11 495 16 510 3.25e-77 251
MS.gene30256.t1 MTR_4g054920 33.945 436 258 10 79 495 93 517 6.87e-77 250
MS.gene30256.t1 MTR_2g086040 32.517 449 282 9 48 491 63 495 2.25e-76 248
MS.gene30256.t1 MTR_8g035810 31.361 507 317 12 10 495 15 511 1.59e-75 246
MS.gene30256.t1 MTR_1g102220 31.290 473 294 11 34 489 43 501 2.92e-74 243
MS.gene30256.t1 MTR_7g406990 37.322 351 208 6 30 369 47 396 6.46e-73 238
MS.gene30256.t1 MTR_8g035760 30.297 472 299 12 34 489 49 506 2.29e-69 230
MS.gene30256.t1 MTR_8g035680 30.021 473 300 13 34 489 49 507 6.24e-69 229
MS.gene30256.t1 MTR_8g035810 30.872 447 279 11 10 436 15 451 1.29e-61 208
MS.gene30256.t1 MTR_8g035680 29.513 349 221 9 157 489 21 360 3.28e-51 178
MS.gene30256.t1 MTR_1g102210 29.290 338 192 8 167 489 51 356 7.68e-44 159
MS.gene30256.t1 MTR_6g084040 43.605 172 78 2 12 182 12 165 8.99e-43 150
MS.gene30256.t1 MTR_1g070370 35.433 254 139 6 168 412 5 242 1.49e-42 151
MS.gene30256.t1 MTR_8g035810 29.288 379 239 10 10 368 15 384 1.86e-40 150
MS.gene30256.t1 MTR_5g009110 26.582 474 274 17 77 495 117 571 1.56e-35 139
MS.gene30256.t1 MTR_7g079440 27.152 453 288 19 61 494 219 648 5.25e-34 136
MS.gene30256.t1 MTR_5g009110 26.077 441 254 15 109 495 1 423 2.66e-32 128
MS.gene30256.t1 MTR_1g062190 23.918 439 296 15 75 494 120 539 6.45e-29 120
MS.gene30256.t1 MTR_7g079440 27.688 372 233 15 61 417 219 569 5.60e-26 112
MS.gene30256.t1 MTR_1g101040 30.258 271 174 7 228 492 252 513 2.70e-25 109
MS.gene30256.t1 MTR_1g050590 44.538 119 60 3 244 357 1 118 4.43e-25 100
MS.gene30256.t1 MTR_5g009110 28.614 339 197 12 77 388 117 437 5.10e-25 108
MS.gene30256.t1 MTR_2g062670 36.126 191 112 6 148 335 49 232 7.57e-25 107
MS.gene30256.t1 MTR_6g072490 29.861 288 183 9 212 492 236 511 3.99e-24 105
MS.gene30256.t1 MTR_7g006900 28.194 227 152 4 266 492 255 470 5.16e-24 105
MS.gene30256.t1 MTR_1g101050 28.889 270 179 7 228 492 248 509 1.64e-23 103
MS.gene30256.t1 MTR_1g040110 42.735 117 64 1 119 232 51 167 1.29e-22 95.1
MS.gene30256.t1 MTR_8g046580 44.554 101 55 1 369 469 193 292 4.31e-22 97.1
MS.gene30256.t1 MTR_4g104610 23.047 512 339 19 6 487 5 491 5.79e-22 99.4
MS.gene30256.t1 MTR_5g009110 28.105 306 177 10 109 388 1 289 8.50e-22 96.3
MS.gene30256.t1 MTR_4g113650 24.439 446 308 11 61 496 95 521 1.07e-21 98.6
MS.gene30256.t1 MTR_1g085680 23.297 455 293 15 61 492 93 514 2.66e-21 97.4
MS.gene30256.t1 MTR_6g017325 23.929 397 261 13 109 492 137 505 5.38e-21 96.3
MS.gene30256.t1 MTR_3g093530 21.698 424 311 10 77 493 114 523 1.33e-20 95.1
MS.gene30256.t1 MTR_2g072270 24.009 454 297 16 59 493 98 522 7.42e-20 92.8
MS.gene30256.t1 MTR_2g010250 27.946 297 192 11 214 494 215 505 8.40e-20 92.8
MS.gene30256.t1 MTR_0025s0110 22.294 462 316 15 47 492 90 524 8.59e-20 92.8
MS.gene30256.t1 MTR_0147s0030 22.418 455 311 15 46 487 99 524 1.02e-19 92.4
MS.gene30256.t1 MTR_6g008500 24.924 329 198 11 165 465 194 501 2.28e-19 91.7
MS.gene30256.t1 MTR_6g008530 28.390 236 147 6 242 465 270 495 2.90e-19 91.3
MS.gene30256.t1 MTR_8g104030 25.820 244 155 6 233 460 8 241 3.38e-19 88.2
MS.gene30256.t1 MTR_5g070920 27.820 266 175 7 233 489 233 490 4.09e-19 90.5
MS.gene30256.t1 MTR_3g014880 23.760 383 260 11 133 494 152 523 7.43e-19 89.7
MS.gene30256.t1 MTR_8g008530 23.472 409 273 11 108 493 127 518 7.79e-19 89.7
MS.gene30256.t1 MTR_2g072400 23.195 457 303 19 56 493 88 515 1.31e-18 89.0
MS.gene30256.t1 MTR_8g042000 22.517 453 286 14 70 493 107 523 1.71e-18 88.6
MS.gene30256.t1 MTR_1g015860 28.916 249 165 6 253 495 287 529 1.74e-18 88.6
MS.gene30256.t1 MTR_2g072340 22.727 462 299 20 56 493 88 515 2.03e-18 88.6
MS.gene30256.t1 MTR_8g104100 25.221 226 153 5 242 460 6 222 2.57e-18 85.1
MS.gene30256.t1 MTR_2g010290 26.804 291 187 10 214 494 258 532 3.54e-18 87.8
MS.gene30256.t1 MTR_8g035790 40.816 98 56 2 398 494 1 97 5.73e-18 79.7
MS.gene30256.t1 MTR_7g012860 26.068 234 155 7 235 462 241 462 5.81e-18 87.0
MS.gene30256.t1 MTR_0287s0060 26.068 234 155 7 235 462 241 462 5.81e-18 87.0
MS.gene30256.t1 MTR_6g084770 26.778 239 159 5 233 460 233 466 7.58e-18 86.7
MS.gene30256.t1 MTR_6g008600 29.358 218 131 7 243 449 270 475 8.05e-18 86.7
MS.gene30256.t1 MTR_6g008620 24.262 474 299 19 6 442 18 468 1.03e-17 86.3
MS.gene30256.t1 MTR_7g098550 23.333 450 296 14 61 495 91 506 1.23e-17 85.9
MS.gene30256.t1 MTR_8g098565 27.670 206 142 4 295 494 302 506 1.24e-17 85.9
MS.gene30256.t1 MTR_7g098550 22.838 451 289 14 61 495 91 498 1.59e-17 85.5
MS.gene30256.t1 MTR_6g042540 25.309 324 215 10 167 473 179 492 1.63e-17 85.5
MS.gene30256.t1 MTR_6g008650 26.255 259 175 7 226 473 246 499 1.69e-17 85.5
MS.gene30256.t1 MTR_5g070690 26.582 237 160 5 247 476 248 477 1.72e-17 85.5
MS.gene30256.t1 MTR_5g070800 26.582 237 160 5 247 476 248 477 1.72e-17 85.5
MS.gene30256.t1 MTR_5g095230 23.844 411 273 13 101 493 125 513 1.90e-17 85.5
MS.gene30256.t1 MTR_0181s0030 26.877 253 163 7 226 470 235 473 2.57e-17 85.1
MS.gene30256.t1 MTR_6g042610 23.077 494 339 19 9 473 12 493 3.22e-17 84.7
MS.gene30256.t1 MTR_1g036140 46.154 91 43 2 251 341 82 166 5.40e-17 79.0
MS.gene30256.t1 MTR_1g036140 40.206 97 50 3 10 99 10 105 1.51e-13 68.9
MS.gene30256.t1 MTR_1g022040 22.374 438 296 13 70 493 95 502 5.84e-17 84.0
MS.gene30256.t1 MTR_2g061750 30.526 190 107 7 74 244 12 195 6.59e-17 79.7
MS.gene30256.t1 MTR_8g042060 27.228 202 130 4 297 493 298 487 6.81e-17 83.6
MS.gene30256.t1 MTR_2g061740 30.526 190 107 7 74 244 12 195 6.92e-17 79.7
MS.gene30256.t1 MTR_8g042060 27.228 202 130 4 297 493 334 523 7.11e-17 83.6
MS.gene30256.t1 MTR_2g055430 29.412 204 123 5 297 493 328 517 7.29e-17 83.6
MS.gene30256.t1 MTR_3g104560 28.736 261 162 8 245 495 156 402 9.10e-17 82.8
MS.gene30256.t1 MTR_6g008430 31.737 167 106 4 284 449 307 466 9.98e-17 83.2
MS.gene30256.t1 MTR_5g070830 27.193 228 151 5 243 460 353 575 1.10e-16 83.2
MS.gene30256.t1 MTR_4g104540 31.928 166 103 4 281 444 219 376 1.16e-16 82.4
MS.gene30256.t1 MTR_8g042020 26.396 197 138 3 297 493 333 522 1.20e-16 82.8
MS.gene30256.t1 MTR_3g104560 28.736 261 162 8 245 495 291 537 1.28e-16 82.8
MS.gene30256.t1 MTR_2g061200 22.030 463 289 15 64 493 105 528 1.38e-16 82.8
MS.gene30256.t1 MTR_2g055470 29.412 204 123 5 297 493 328 517 1.71e-16 82.4
MS.gene30256.t1 MTR_5g070710 26.357 258 174 7 240 489 239 488 1.83e-16 82.4
MS.gene30256.t1 MTR_6g008640 24.308 325 216 9 167 473 185 497 2.31e-16 82.0
MS.gene30256.t1 MTR_1g069200 21.133 459 324 14 47 492 77 510 2.66e-16 82.0
MS.gene30256.t1 MTR_7g087520 23.179 453 307 19 32 462 43 476 3.44e-16 81.6
MS.gene30256.t1 MTR_5g073320 24.894 470 283 19 25 463 35 465 6.49e-16 80.5
MS.gene30256.t1 MTR_0171s0020 26.154 260 168 8 222 469 226 473 6.98e-16 80.5
MS.gene30256.t1 MTR_4g094775 23.053 321 228 7 158 473 161 467 7.11e-16 80.5
MS.gene30256.t1 MTR_7g079440 26.950 282 177 12 61 327 219 486 7.24e-16 80.5
MS.gene30256.t1 MTR_6g022450 24.047 341 228 10 165 493 177 498 7.29e-16 80.5
MS.gene30256.t1 MTR_4g062510 25.000 252 154 8 233 460 237 477 8.66e-16 80.5
MS.gene30256.t1 MTR_4g104570 32.680 153 93 4 294 444 1 145 9.50e-16 76.3
MS.gene30256.t1 MTR_8g036185 25.909 220 146 5 262 470 276 489 1.10e-15 80.1
MS.gene30256.t1 MTR_2g010330 27.778 216 150 5 283 494 294 507 1.15e-15 79.7
MS.gene30256.t1 MTR_2g072380 27.638 199 133 4 297 493 161 350 1.28e-15 78.6
MS.gene30256.t1 MTR_6g004570 42.991 107 41 3 243 332 6 109 1.46e-15 77.0
MS.gene30256.t1 MTR_5g073250 25.118 211 146 4 256 463 263 464 1.56e-15 79.3
MS.gene30256.t1 MTR_2g072310 27.136 199 134 4 297 493 161 350 1.85e-15 78.2
MS.gene30256.t1 MTR_7g103450 28.033 239 155 8 260 493 280 506 1.90e-15 79.3
MS.gene30256.t1 MTR_4g089020 25.850 294 193 11 162 444 159 438 1.90e-15 79.0
MS.gene30256.t1 MTR_2g023680 26.131 199 136 4 297 493 328 517 1.96e-15 79.3
MS.gene30256.t1 MTR_2g072380 27.638 199 133 4 297 493 301 490 2.44e-15 79.0
MS.gene30256.t1 MTR_0171s0030 25.581 258 173 7 222 467 138 388 2.70e-15 78.2
MS.gene30256.t1 MTR_5g034900 26.389 216 154 4 282 494 304 517 2.73e-15 78.6
MS.gene30256.t1 MTR_4g104550 24.407 295 204 7 157 444 155 437 3.01e-15 78.6
MS.gene30256.t1 MTR_8g063280 25.322 233 165 6 237 463 235 464 3.27e-15 78.6
MS.gene30256.t1 MTR_2g010380 23.552 259 184 6 222 469 227 482 3.55e-15 78.2
MS.gene30256.t1 MTR_8g012585 23.574 263 179 6 244 494 197 449 4.49e-15 77.8
MS.gene30256.t1 MTR_3g076530 24.621 264 175 8 240 492 251 501 4.83e-15 77.8
MS.gene30256.t1 MTR_7g012330 24.348 230 155 6 246 469 253 469 5.58e-15 77.8
MS.gene30256.t1 MTR_8g469360 23.709 426 290 14 81 493 20 423 5.81e-15 77.4
MS.gene30256.t1 MTR_5g070700 24.427 262 176 7 240 489 240 491 5.90e-15 77.8
MS.gene30256.t1 MTR_2g072250 27.451 204 127 5 297 493 324 513 7.08e-15 77.4
MS.gene30256.t1 MTR_8g076290 25.581 215 136 7 245 444 245 450 7.35e-15 77.4
MS.gene30256.t1 MTR_5g470730 27.778 198 129 3 233 420 233 426 7.78e-15 77.0
MS.gene30256.t1 MTR_4g018800 24.150 294 197 9 167 444 187 470 9.50e-15 77.0
MS.gene30256.t1 MTR_7g075610 23.664 393 248 15 103 463 95 467 1.05e-14 77.0
MS.gene30256.t1 MTR_1g091023 25.455 220 152 6 245 462 248 457 1.15e-14 76.6
MS.gene30256.t1 MTR_1g091003 25.455 220 152 6 245 462 248 457 1.97e-14 75.9
MS.gene30256.t1 MTR_1g091010 25.455 220 152 6 245 462 247 456 2.09e-14 75.9
MS.gene30256.t1 MTR_2g010280 24.912 285 200 6 222 494 221 503 2.48e-14 75.9
MS.gene30256.t1 MTR_5g007460 23.348 227 168 3 244 470 227 447 3.24e-14 75.1
MS.gene30256.t1 MTR_2g062680 31.126 151 69 3 285 430 31 151 3.61e-14 71.6
MS.gene30256.t1 MTR_4g077210 23.262 374 252 13 85 448 103 451 3.78e-14 75.1
MS.gene30256.t1 MTR_1g023730 24.345 267 174 9 242 494 260 512 3.86e-14 75.1
MS.gene30256.t1 MTR_3g057860 24.242 264 185 7 235 489 240 497 4.03e-14 75.1
MS.gene30256.t1 MTR_0171s0010 29.730 222 138 8 254 469 266 475 4.30e-14 75.1
MS.gene30256.t1 MTR_8g089800 26.337 243 162 7 239 473 237 470 4.43e-14 74.7
MS.gene30256.t1 MTR_8g042040 26.882 186 119 4 313 493 333 506 6.51e-14 74.3
MS.gene30256.t1 MTR_5g094550 30.159 189 116 7 265 449 272 448 9.00e-14 73.9
MS.gene30256.t1 MTR_6g084900 23.377 231 162 5 240 460 3 228 1.11e-13 71.6
MS.gene30256.t1 MTR_8g012970 26.721 247 164 8 235 479 239 470 1.17e-13 73.6
MS.gene30256.t1 MTR_2g072260 26.471 204 129 5 297 493 321 510 1.28e-13 73.6
MS.gene30256.t1 MTR_5g095290 22.754 334 231 11 138 463 150 464 1.31e-13 73.6
MS.gene30256.t1 MTR_2g010320 26.852 216 152 5 283 494 290 503 1.61e-13 73.2
MS.gene30256.t1 MTR_4g088160 23.488 281 175 10 213 467 208 474 1.75e-13 73.2
MS.gene30256.t1 MTR_0022s0290 27.136 199 137 5 258 455 281 472 2.43e-13 72.8
MS.gene30256.t1 MTR_4g088420 27.072 181 126 3 294 473 31 206 2.76e-13 70.1
MS.gene30256.t1 MTR_2g072420 29.167 144 94 3 356 496 5 143 3.07e-13 67.4
MS.gene30256.t1 MTR_4g088405 27.018 285 179 9 203 473 139 408 3.23e-13 72.0
MS.gene30256.t1 MTR_4g088400 26.190 252 173 6 228 473 250 494 3.70e-13 72.0
MS.gene30256.t1 MTR_3g467220 21.578 431 301 16 33 442 52 466 3.85e-13 72.0
MS.gene30256.t1 MTR_4g071710 26.496 234 148 9 243 460 249 474 3.87e-13 72.0
MS.gene30256.t1 MTR_4g089030 28.049 164 112 3 281 444 305 462 4.33e-13 72.0
MS.gene30256.t1 MTR_4g089025 22.472 267 188 7 240 493 257 517 4.87e-13 71.6
MS.gene30256.t1 MTR_2g437840 23.432 303 204 10 160 450 163 449 5.16e-13 71.6
MS.gene30256.t1 MTR_4g078110 31.410 156 97 4 291 444 275 422 5.64e-13 71.2
MS.gene30256.t1 MTR_5g026520 25.946 185 126 5 267 448 284 460 5.71e-13 71.2
MS.gene30256.t1 MTR_5g070850 21.512 344 247 7 121 454 129 459 6.21e-13 71.2
MS.gene30256.t1 MTR_1g031700 25.100 251 164 8 222 462 223 459 6.95e-13 71.2
MS.gene30256.t1 MTR_2g010300 25.980 204 132 5 295 494 301 489 8.04e-13 70.9
MS.gene30256.t1 MTR_5g094520 24.171 211 148 4 256 463 294 495 1.04e-12 70.9
MS.gene30256.t1 MTR_6g008630 26.702 191 134 3 284 473 224 409 1.15e-12 70.1
MS.gene30256.t1 MTR_5g007450 25.743 202 134 5 266 463 272 461 1.17e-12 70.5
MS.gene30256.t1 MTR_5g016410 23.345 287 203 8 166 448 169 442 1.19e-12 70.5
MS.gene30256.t1 MTR_1g107295 20.308 325 224 7 157 460 165 475 1.32e-12 70.5
MS.gene30256.t1 MTR_5g094520 26.042 192 130 4 256 444 189 371 1.34e-12 70.1
MS.gene30256.t1 MTR_5g056720 24.490 343 204 12 147 483 114 407 1.52e-12 69.7
MS.gene30256.t1 MTR_1g103670 22.086 326 216 11 138 444 136 442 1.77e-12 69.7
MS.gene30256.t1 MTR_1g107300 23.729 177 119 4 300 471 9 174 1.85e-12 67.0
MS.gene30256.t1 MTR_5g070840 28.058 139 95 2 324 460 1 136 1.99e-12 66.2
MS.gene30256.t1 MTR_8g027040 27.922 154 105 5 298 449 348 497 2.03e-12 69.7
MS.gene30256.t1 MTR_6g035100 24.229 227 162 5 240 463 244 463 2.35e-12 69.3
MS.gene30256.t1 MTR_5g018500 22.840 162 118 4 306 465 4 160 2.51e-12 66.2
MS.gene30256.t1 MTR_3g467140 24.731 186 135 3 266 451 122 302 2.70e-12 68.6
MS.gene30256.t1 MTR_3g057980 25.000 228 149 8 242 464 249 459 3.58e-12 68.9
MS.gene30256.t1 MTR_1g035140 27.948 229 141 12 244 464 251 463 3.93e-12 68.9
MS.gene30256.t1 MTR_0638s0020 23.492 315 217 9 156 460 90 390 4.58e-12 68.2
MS.gene30256.t1 MTR_2g073420 25.112 223 156 5 243 463 258 471 5.02e-12 68.6
MS.gene30256.t1 MTR_8g077810 21.704 493 314 19 9 474 16 463 5.58e-12 68.2
MS.gene30256.t1 MTR_6g034965 23.377 231 167 5 236 463 240 463 5.68e-12 68.2
MS.gene30256.t1 MTR_2g450040 28.571 182 119 6 284 462 305 478 5.76e-12 68.2
MS.gene30256.t1 MTR_3g467140 24.731 186 135 3 266 451 255 435 5.81e-12 68.2
MS.gene30256.t1 MTR_5g094560 26.238 202 137 4 265 463 272 464 8.26e-12 67.8
MS.gene30256.t1 MTR_4g095050 24.658 292 196 13 165 448 171 446 8.38e-12 67.8
MS.gene30256.t1 MTR_4g026080 27.326 172 115 6 294 463 1 164 8.71e-12 64.7
MS.gene30256.t1 MTR_4g088425 28.000 250 165 10 228 470 233 474 9.67e-12 67.4
MS.gene30256.t1 MTR_5g010750 20.907 397 280 11 100 494 106 470 1.18e-11 67.4
MS.gene30256.t1 MTR_6g034940 24.390 246 170 7 239 477 230 466 1.25e-11 67.0
MS.gene30256.t1 MTR_5g007550 23.923 209 143 5 266 470 272 468 1.38e-11 67.0
MS.gene30256.t1 MTR_4g031820 25.523 239 155 5 266 493 301 527 1.40e-11 67.0
MS.gene30256.t1 MTR_4g109470 25.591 254 166 9 220 463 227 467 1.41e-11 67.0
MS.gene30256.t1 MTR_5g070973 30.252 119 82 1 337 455 14 131 1.43e-11 63.5
MS.gene30256.t1 MTR_1g031710 27.389 157 100 4 266 418 81 227 1.44e-11 65.9
MS.gene30256.t1 MTR_1g037370 25.683 183 125 5 264 444 266 439 1.70e-11 66.6
MS.gene30256.t1 MTR_3g057910 22.477 218 162 4 252 469 263 473 2.37e-11 66.2
MS.gene30256.t1 MTR_3g058220 22.174 460 294 22 32 464 42 464 2.74e-11 66.2
MS.gene30256.t1 MTR_7g075540 23.837 344 213 15 143 463 147 464 3.05e-11 65.9
MS.gene30256.t1 MTR_3g020780 24.051 237 166 7 242 470 252 482 3.22e-11 65.9
MS.gene30256.t1 MTR_5g010750 21.526 367 256 10 100 464 106 442 3.53e-11 65.5
MS.gene30256.t1 MTR_7g027960 22.800 500 314 23 9 468 4 471 3.68e-11 65.9
MS.gene30256.t1 MTR_2g065360 21.067 375 242 13 129 476 100 447 4.36e-11 65.5
MS.gene30256.t1 MTR_5g019010 28.814 177 108 7 293 464 303 466 5.56e-11 65.1
MS.gene30256.t1 MTR_4g102310 24.038 208 140 5 244 444 254 450 6.46e-11 65.1
MS.gene30256.t1 MTR_4g031820 25.946 185 120 4 314 493 333 505 7.06e-11 64.7
MS.gene30256.t1 MTR_3g467130 20.048 414 280 14 41 451 70 435 7.80e-11 64.7
MS.gene30256.t1 MTR_0059s0170 26.357 258 152 15 228 464 225 465 7.86e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30256.t1 AT2G23180 45.914 514 258 4 1 495 1 513 6.69e-163 471
MS.gene30256.t1 AT4G39490 45.367 518 261 5 1 496 1 518 5.66e-162 469
MS.gene30256.t1 AT4G39480 44.854 515 265 4 1 496 1 515 1.44e-150 440
MS.gene30256.t1 AT4G39500 43.898 508 255 5 8 494 18 516 6.67e-150 438
MS.gene30256.t1 AT2G21910 46.331 477 240 5 33 496 35 508 8.20e-150 438
MS.gene30256.t1 AT1G47620 46.624 474 239 5 33 494 44 515 1.01e-147 433
MS.gene30256.t1 AT1G65340 44.536 485 247 4 24 493 25 502 2.74e-145 426
MS.gene30256.t1 AT4G32170 42.773 512 266 7 1 494 1 503 3.95e-144 423
MS.gene30256.t1 AT4G39500 44.468 470 244 3 38 494 1 466 2.07e-143 420
MS.gene30256.t1 AT5G52320 44.421 484 248 4 24 493 25 501 4.17e-143 421
MS.gene30256.t1 AT4G39510 41.683 499 274 4 9 494 11 505 2.45e-142 419
MS.gene30256.t1 AT5G52320 44.259 479 246 4 24 488 25 496 1.41e-141 416
MS.gene30256.t1 AT1G57750 42.063 504 272 4 1 494 3 496 1.13e-138 409
MS.gene30256.t1 AT5G08250 38.900 509 288 7 6 496 39 542 2.55e-127 382
MS.gene30256.t1 AT5G23190 37.747 506 299 5 6 496 38 542 5.56e-126 379
MS.gene30256.t1 AT5G02900 40.980 510 254 8 1 494 1 479 8.61e-126 375
MS.gene30256.t1 AT5G08250 39.419 482 269 7 33 496 4 480 8.34e-123 368
MS.gene30256.t1 AT1G63710 39.834 482 267 10 33 496 33 509 5.09e-114 347
MS.gene30256.t1 AT3G26125 38.124 501 273 11 25 496 42 534 9.28e-112 342
MS.gene30256.t1 AT1G13140 35.857 502 305 7 10 496 27 526 1.83e-110 338
MS.gene30256.t1 AT1G24540 35.433 508 307 8 6 495 17 521 3.22e-109 334
MS.gene30256.t1 AT1G13140 35.091 493 295 6 10 496 27 500 7.30e-108 330
MS.gene30256.t1 AT2G45970 37.603 484 278 8 33 496 33 512 2.25e-107 330
MS.gene30256.t1 AT1G01600 37.860 486 277 9 33 496 33 515 2.75e-106 328
MS.gene30256.t1 AT4G00360 37.603 484 279 8 33 496 33 513 6.45e-106 327
MS.gene30256.t1 AT5G58860 36.454 502 302 7 7 494 10 508 9.03e-106 325
MS.gene30256.t1 AT1G13150 36.756 487 291 8 25 496 35 519 1.45e-105 325
MS.gene30256.t1 AT1G57750 39.815 432 240 4 1 422 3 424 2.11e-105 322
MS.gene30256.t1 AT3G56630 35.774 478 280 14 33 495 34 499 2.06e-87 277
MS.gene30256.t1 AT1G69500 33.269 520 292 13 19 495 17 524 2.39e-85 273
MS.gene30256.t1 AT1G34540 35.282 479 280 15 33 495 34 498 1.63e-83 267
MS.gene30256.t1 AT2G27690 35.185 432 261 8 74 495 73 495 1.06e-82 265
MS.gene30256.t1 AT3G48520 33.124 477 290 10 33 495 39 500 4.89e-81 261
MS.gene30256.t1 AT2G44890 32.937 504 310 13 9 495 17 509 1.85e-80 259
MS.gene30256.t1 AT2G45510 33.135 504 309 13 9 495 17 509 7.75e-80 258
MS.gene30256.t1 AT2G44890 32.265 499 302 12 9 495 17 491 1.99e-77 251
MS.gene30256.t1 AT5G63450 35.402 435 252 12 75 494 82 502 4.15e-76 248
MS.gene30256.t1 AT3G01900 32.568 479 297 11 26 494 28 490 5.06e-76 248
MS.gene30256.t1 AT5G63450 35.484 434 251 12 76 494 141 560 2.21e-75 248
MS.gene30256.t1 AT1G31800 26.959 434 286 15 77 495 153 570 4.57e-36 141
MS.gene30256.t1 AT3G53130 25.850 441 285 17 75 494 120 539 2.94e-31 127
MS.gene30256.t1 AT4G15110 25.106 470 281 17 80 495 127 579 6.58e-30 123
MS.gene30256.t1 AT2G26710 24.895 478 308 16 38 493 66 514 9.20e-25 107
MS.gene30256.t1 AT2G46950 24.503 453 291 15 59 492 148 568 8.60e-23 102
MS.gene30256.t1 AT5G51900 39.394 132 65 1 216 332 3 134 2.79e-22 96.3
MS.gene30256.t1 AT1G66030 31.765 170 98 3 1 159 1 163 4.33e-21 90.5
MS.gene30256.t1 AT5G52400 29.167 264 170 9 236 492 264 517 7.24e-21 95.9
MS.gene30256.t1 AT5G24900 22.305 538 343 18 1 491 15 524 1.20e-20 95.5
MS.gene30256.t1 AT5G24900 23.666 431 280 14 85 491 2 407 4.23e-20 92.8
MS.gene30256.t1 AT3G48300 25.767 326 227 10 167 489 164 477 1.26e-19 92.0
MS.gene30256.t1 AT3G48300 25.767 326 227 10 167 489 166 479 1.27e-19 92.0
MS.gene30256.t1 AT4G27710 25.219 456 284 19 57 489 91 512 2.79e-19 91.3
MS.gene30256.t1 AT4G13310 27.465 284 188 8 167 444 171 442 7.72e-19 89.7
MS.gene30256.t1 AT4G37410 25.225 333 227 10 131 459 135 449 8.59e-19 89.7
MS.gene30256.t1 AT2G27000 24.929 353 242 11 156 496 167 508 1.80e-18 88.6
MS.gene30256.t1 AT4G13290 26.644 289 190 8 160 444 165 435 6.62e-18 86.7
MS.gene30256.t1 AT2G46960 22.489 458 302 15 57 492 89 515 7.60e-18 86.7
MS.gene30256.t1 AT3G14680 23.799 437 296 16 70 493 99 511 8.88e-18 86.7
MS.gene30256.t1 AT5G24910 25.188 266 174 8 242 494 279 532 1.33e-17 85.9
MS.gene30256.t1 AT3G14640 27.203 261 167 7 242 493 289 535 1.51e-17 85.9
MS.gene30256.t1 AT1G64940 24.324 296 205 8 212 495 222 510 1.88e-17 85.5
MS.gene30256.t1 AT3G14640 27.203 261 167 7 242 493 267 513 1.88e-17 85.5
MS.gene30256.t1 AT3G25180 25.397 252 175 5 229 473 238 483 2.01e-17 85.5
MS.gene30256.t1 AT3G61040 26.887 212 148 5 253 463 255 460 3.33e-17 84.7
MS.gene30256.t1 AT4G15350 24.859 354 243 12 155 496 162 504 5.40e-17 84.0
MS.gene30256.t1 AT3G14660 21.930 456 306 16 56 493 88 511 5.65e-17 84.0
MS.gene30256.t1 AT3G20140 25.143 350 238 11 156 495 170 505 7.81e-17 83.6
MS.gene30256.t1 AT2G27010 25.455 330 221 12 143 462 135 449 8.83e-17 83.2
MS.gene30256.t1 AT3G14660 27.542 236 150 6 266 493 143 365 9.43e-17 82.4
MS.gene30256.t1 AT3G14650 22.418 455 305 16 56 493 88 511 1.04e-16 83.2
MS.gene30256.t1 AT2G14100 25.974 308 210 10 163 464 177 472 1.66e-16 82.4
MS.gene30256.t1 AT5G06900 25.000 252 170 8 223 467 226 465 1.70e-16 82.4
MS.gene30256.t1 AT5G38450 28.804 184 112 4 314 492 345 514 2.31e-16 82.0
MS.gene30256.t1 AT3G14690 27.966 236 149 6 266 493 289 511 2.81e-16 82.0
MS.gene30256.t1 AT3G14690 27.966 236 149 6 266 493 324 546 3.11e-16 81.6
MS.gene30256.t1 AT3G20940 26.872 227 142 7 240 455 255 468 5.08e-16 81.3
MS.gene30256.t1 AT4G37400 25.444 338 220 11 131 459 135 449 5.17e-16 80.9
MS.gene30256.t1 AT3G14630 26.592 267 173 8 236 493 255 507 5.28e-16 80.9
MS.gene30256.t1 AT3G14630 26.592 267 173 8 236 493 310 562 7.53e-16 80.5
MS.gene30256.t1 AT3G14620 29.004 231 142 5 264 486 291 507 8.55e-16 80.5
MS.gene30256.t1 AT3G32047 24.919 309 211 9 163 464 176 470 1.00e-15 80.1
MS.gene30256.t1 AT4G13770 26.141 241 155 7 235 467 242 467 1.06e-15 80.1
MS.gene30256.t1 AT4G31950 24.904 261 172 9 233 478 236 487 1.40e-15 79.7
MS.gene30256.t1 AT3G20110 27.000 300 200 9 156 450 167 452 3.50e-15 78.6
MS.gene30256.t1 AT3G20120 26.471 204 138 5 253 450 264 461 3.73e-15 78.2
MS.gene30256.t1 AT4G31940 21.622 481 322 19 28 473 34 494 4.48e-15 78.2
MS.gene30256.t1 AT3G20120 26.471 204 138 5 253 450 128 325 5.48e-15 77.0
MS.gene30256.t1 AT3G20120 26.471 204 138 5 253 450 128 325 5.48e-15 77.0
MS.gene30256.t1 AT3G20120 26.471 204 138 5 253 450 128 325 5.48e-15 77.0
MS.gene30256.t1 AT4G37340 24.483 290 193 8 166 448 170 440 5.85e-15 77.8
MS.gene30256.t1 AT3G20935 29.480 173 111 5 294 462 134 299 8.02e-15 76.3
MS.gene30256.t1 AT1G01190 27.604 192 127 7 298 484 338 522 1.08e-14 77.0
MS.gene30256.t1 AT1G01190 27.604 192 127 7 298 484 333 517 1.14e-14 77.0
MS.gene30256.t1 AT2G45580 26.809 235 154 8 235 463 96 318 1.16e-14 75.9
MS.gene30256.t1 AT1G67110 25.778 225 148 4 273 492 298 508 1.44e-14 76.6
MS.gene30256.t1 AT3G14610 22.318 466 293 18 56 493 87 511 1.63e-14 76.3
MS.gene30256.t1 AT2G46960 23.754 341 217 11 168 492 86 399 1.67e-14 75.9
MS.gene30256.t1 AT4G31970 24.715 263 169 11 229 473 242 493 2.18e-14 75.9
MS.gene30256.t1 AT2G45580 26.809 235 154 8 235 463 250 472 2.51e-14 75.9
MS.gene30256.t1 AT1G33730 23.810 273 186 8 194 464 84 336 2.69e-14 74.7
MS.gene30256.t1 AT1G33730 23.810 273 186 8 194 464 84 336 2.69e-14 74.7
MS.gene30256.t1 AT2G45560 25.899 278 184 8 228 495 244 509 3.58e-14 75.1
MS.gene30256.t1 AT2G45570 24.643 280 187 6 227 494 242 509 4.20e-14 75.1
MS.gene30256.t1 AT1G64950 22.857 280 199 7 227 495 236 509 4.69e-14 74.7
MS.gene30256.t1 AT2G45550 25.751 233 159 6 270 496 286 510 5.14e-14 74.7
MS.gene30256.t1 AT1G64930 25.551 227 160 6 274 495 288 510 2.06e-13 72.8
MS.gene30256.t1 AT3G48270 27.152 151 105 2 292 442 286 431 2.15e-13 72.8
MS.gene30256.t1 AT3G26270 25.514 243 159 7 233 465 240 470 3.08e-13 72.4
MS.gene30256.t1 AT2G24180 25.000 240 162 4 254 487 264 491 3.53e-13 72.0
MS.gene30256.t1 AT2G30770 28.177 181 125 4 292 472 293 468 3.97e-13 72.0
MS.gene30256.t1 AT3G61880 23.113 212 152 6 253 460 288 492 4.30e-13 72.0
MS.gene30256.t1 AT3G61880 23.113 212 152 6 253 460 288 492 5.42e-13 71.6
MS.gene30256.t1 AT4G37310 22.961 331 212 12 158 469 162 468 6.03e-13 71.6
MS.gene30256.t1 AT4G15360 26.442 208 142 6 247 450 259 459 7.66e-13 71.2
MS.gene30256.t1 AT4G37330 27.530 247 130 9 220 448 222 437 9.93e-13 70.9
MS.gene30256.t1 AT2G12190 23.050 282 198 8 227 495 236 511 1.12e-12 70.5
MS.gene30256.t1 AT3G26830 22.747 233 169 5 233 460 232 458 1.16e-12 70.5
MS.gene30256.t1 AT3G48310 23.248 314 219 8 164 471 164 461 1.56e-12 70.1
MS.gene30256.t1 AT3G48280 23.158 285 190 9 168 442 166 431 1.59e-12 70.1
MS.gene30256.t1 AT2G23190 23.975 317 221 9 131 444 181 480 1.70e-12 70.1
MS.gene30256.t1 AT5G06905 24.898 245 162 6 243 470 245 484 1.91e-12 69.7
MS.gene30256.t1 AT1G33720 24.762 210 146 5 293 496 200 403 2.43e-12 68.9
MS.gene30256.t1 AT5G09970 23.438 256 182 7 242 493 289 534 4.00e-12 68.9
MS.gene30256.t1 AT3G03470 22.134 253 177 5 236 473 238 485 1.43e-11 67.0
MS.gene30256.t1 AT4G20240 23.284 408 265 14 29 416 34 413 1.72e-11 66.6
MS.gene30256.t1 AT3G48290 25.000 216 146 5 233 442 228 433 2.57e-11 66.2
MS.gene30256.t1 AT1G66540 26.556 241 138 9 212 448 63 268 2.76e-11 65.1
MS.gene30256.t1 AT2G26170 25.197 254 171 7 251 494 277 521 2.82e-11 66.2
MS.gene30256.t1 AT2G26170 25.197 254 171 7 251 494 194 438 2.86e-11 65.9
MS.gene30256.t1 AT1G66540 23.837 344 199 14 131 448 21 327 3.85e-11 65.1
MS.gene30256.t1 AT3G20090 25.837 209 143 7 247 450 262 463 5.87e-11 65.1
MS.gene30256.t1 AT4G37430 22.667 300 208 9 166 459 171 452 6.30e-11 65.1
MS.gene30256.t1 AT3G20090 25.837 209 143 7 247 450 124 325 6.35e-11 64.7
MS.gene30256.t1 AT5G57220 22.819 298 210 8 164 459 164 443 7.12e-11 64.7
MS.gene30256.t1 AT3G28740 27.313 227 146 7 235 459 247 456 7.31e-11 64.7
MS.gene30256.t1 AT5G24950 24.865 185 119 5 292 467 293 466 7.72e-11 64.7
MS.gene30256.t1 AT5G67310 24.219 256 175 6 242 496 262 499 9.47e-11 64.3
MS.gene30256.t1 AT5G25120 21.469 354 262 9 121 469 121 463 9.70e-11 64.3

Find 90 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTCTCACATGCAATTTC+AGG 0.167970 7.3:+64844862 None:intergenic
AACAGAAACACTTGGGATTA+TGG 0.172616 7.3:+64844039 None:intergenic
CTGTCCTTGCATTTCTGTTT+TGG 0.196978 7.3:+64844690 None:intergenic
TACCATCAAGAGAACATAAT+TGG 0.223565 7.3:-64844462 MS.gene30256:CDS
TCGGAAGGGTCGAGGAAATA+TGG 0.225041 7.3:-64844261 MS.gene30256:CDS
GAACATAATTGGAAAGATTT+AGG 0.231908 7.3:-64844451 MS.gene30256:CDS
TTCCAATTATGTTCTCTTGA+TGG 0.283712 7.3:+64844460 None:intergenic
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.3:-64844113 MS.gene30256:CDS
TGTGATGTGTTGCACGTTCA+TGG 0.309123 7.3:+64845209 None:intergenic
TTCTATTGAGCCTCCAATAA+TGG 0.318253 7.3:+64845397 None:intergenic
GTTTAGATAATCATGGATAT+TGG 0.321729 7.3:+64845314 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.337855 7.3:-64844146 MS.gene30256:CDS
GAAACACACCAATCACAAAA+TGG 0.358004 7.3:-64845377 MS.gene30256:CDS
ACAGAAACACTTGGGATTAT+GGG 0.358549 7.3:+64844040 None:intergenic
TGCAGCTTCCAGTAAAATCT+TGG 0.363515 7.3:+64844796 None:intergenic
CTATTAGCTCGGGCCTTACT+TGG 0.384695 7.3:-64844552 MS.gene30256:CDS
TGGAAAGATTTAGGAGCAAA+AGG 0.385412 7.3:-64844442 MS.gene30256:CDS
AATGCAGATTTATGCTCTAA+AGG 0.389672 7.3:+64844355 None:intergenic
TGGCATTGGAGAAATCCTTT+TGG 0.393951 7.3:-64845442 MS.gene30256:CDS
TTCTTAGAAATCCACCTCTC+TGG 0.395719 7.3:+64844214 None:intergenic
AGAATCTTCGCTTCAACAAA+AGG 0.397462 7.3:+64844505 None:intergenic
AGTTCAATAGAAAGACAATT+AGG 0.403320 7.3:+64844886 None:intergenic
CGGAAGGGTCGAGGAAATAT+GGG 0.405411 7.3:-64844260 MS.gene30256:CDS
ATGTGCTTCCTAGTGGGCAT+AGG 0.416309 7.3:-64844324 MS.gene30256:CDS
TTTACTGGAAGCTGCAGAAA+TGG 0.418054 7.3:-64844789 MS.gene30256:CDS
AAGTTCATTGCTTTCAATGC+TGG 0.422395 7.3:-64844163 MS.gene30256:CDS
AACAGAATAATGTACATGTT+TGG 0.426464 7.3:-64845462 None:intergenic
AGCAAGTTAATTTATTTACA+TGG 0.435812 7.3:-64844415 MS.gene30256:CDS
TCCTTGCAATCCATTATTGG+AGG 0.436330 7.3:-64845407 MS.gene30256:CDS
AAACTAAGTTTAGATAATCA+TGG 0.439005 7.3:+64845307 None:intergenic
GTGATGTGTTGCACGTTCAT+GGG 0.444314 7.3:+64845210 None:intergenic
AGCCTTGAGGCTTTATCCTC+CGG 0.446796 7.3:-64844380 MS.gene30256:CDS
GAAAGCAATGAACTTGTAAG+AGG 0.446809 7.3:+64844171 None:intergenic
GCTGGACCAAGGAGTTGTTT+GGG 0.457057 7.3:-64844145 MS.gene30256:CDS
CCTGTGGTGGGAATGCTACC+TGG 0.468759 7.3:-64845354 MS.gene30256:CDS
CTCTCTCACATGCAATTTCA+GGG 0.473701 7.3:+64844863 None:intergenic
ACACATGAAACATGGCTTGA+AGG 0.478348 7.3:-64844011 MS.gene30256:CDS
GATTTATGCTCTAAAGGAAC+CGG 0.481253 7.3:+64844361 None:intergenic
TCCTTTCCCAAACAACTCCT+TGG 0.489731 7.3:+64844139 None:intergenic
CGAGCTAATAGTGTCTCTTC+CGG 0.491901 7.3:+64844564 None:intergenic
ATAATGTACATGTTTGGCAT+TGG 0.492274 7.3:-64845456 MS.gene30256:CDS
GAGAGGTGGATTTCTAAGAA+AGG 0.501802 7.3:-64844211 MS.gene30256:CDS
TGTGCTTCCTAGTGGGCATA+GGG 0.508071 7.3:-64844323 MS.gene30256:CDS
TTGCACGTTCATGGGGTCAC+TGG 0.508498 7.3:+64845218 None:intergenic
AATATCATTATGAATGAAGC+AGG 0.509091 7.3:-64844649 MS.gene30256:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.3:-64844245 MS.gene30256:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.509558 7.3:-64844441 MS.gene30256:CDS
CGGAAGAGACACTATTAGCT+CGG 0.511894 7.3:-64844563 MS.gene30256:CDS
ATACTCCGTCGGAAGGGTCG+AGG 0.512608 7.3:-64844269 MS.gene30256:CDS
GAATCTTCGCTTCAACAAAA+GGG 0.520382 7.3:+64844506 None:intergenic
AGCACAAAATTCGAAAACTA+CGG 0.529788 7.3:-64845186 MS.gene30256:CDS
GCCTCCAATAATGGATTGCA+AGG 0.531804 7.3:+64845406 None:intergenic
TTCTCTATACTCCGTCGGAA+GGG 0.538832 7.3:-64844275 MS.gene30256:CDS
ACCAAGGAGTTGTTTGGGAA+AGG 0.545076 7.3:-64844140 MS.gene30256:CDS
GATTTAACCCTATGCCCACT+AGG 0.546777 7.3:+64844316 None:intergenic
ATTATGAATGAAGCAGGAGA+TGG 0.551989 7.3:-64844643 MS.gene30256:CDS
GGAAGAGACACTATTAGCTC+GGG 0.554667 7.3:-64844562 MS.gene30256:CDS
AATCACAAAATGGCCTGTGG+TGG 0.554754 7.3:-64845367 MS.gene30256:CDS
CTGCAGAAATGGTTTCAAGT+TGG 0.558446 7.3:-64844778 MS.gene30256:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.3:-64844276 MS.gene30256:CDS
GCACAAAATTCGAAAACTAC+GGG 0.571099 7.3:-64845185 MS.gene30256:CDS
TACATAACATATATTGTCAA+AGG 0.575867 7.3:+64844924 None:intergenic
AGGTGGATTTCTAAGAAAGG+AGG 0.583250 7.3:-64844208 MS.gene30256:CDS
TCGATTAATCTACTTGCAGC+CGG 0.585006 7.3:-64844583 MS.gene30256:CDS
TGTAAAACAACAGAAACACT+TGG 0.585278 7.3:+64844031 None:intergenic
TGGAATTTAAACCAGAGAGG+TGG 0.591655 7.3:-64844225 MS.gene30256:CDS
CCAGGTAGCATTCCCACCAC+AGG 0.598908 7.3:+64845354 None:intergenic
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.3:-64844393 MS.gene30256:CDS
AAATCTGATGTGCTTCCTAG+TGG 0.599783 7.3:-64844331 MS.gene30256:CDS
GAGAGCATTTACTCAAGTAG+AGG 0.601825 7.3:-64844845 MS.gene30256:CDS
ATCACAAAATGGCCTGTGGT+GGG 0.602336 7.3:-64845366 MS.gene30256:CDS
GAATTATCACATTCAAGTGG+TGG 0.608088 7.3:-64844071 MS.gene30256:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7.3:-64844074 MS.gene30256:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.3:-64844280 MS.gene30256:CDS
TATTTCCTCGACCCTTCCGA+CGG 0.611269 7.3:+64844264 None:intergenic
AAAGCAATGAACTTGTAAGA+GGG 0.614350 7.3:+64844172 None:intergenic
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.3:-64844156 MS.gene30256:CDS
GGTGGATTTCTAAGAAAGGA+GGG 0.623329 7.3:-64844207 MS.gene30256:CDS
AAATTCGAAAACTACGGGAA+AGG 0.623669 7.3:-64845180 MS.gene30256:CDS
ACGTTCATGTTTGATAACCA+TGG 0.625383 7.3:+64845249 None:intergenic
GACATGTTGTATAAGAGACC+AGG 0.626234 7.3:+64845336 None:intergenic
AATCTGATGTGCTTCCTAGT+GGG 0.627619 7.3:-64844330 MS.gene30256:CDS
TGATGTGTTGCACGTTCATG+GGG 0.632592 7.3:+64845211 None:intergenic
AAATCCAAAACAGAAATGCA+AGG 0.640181 7.3:-64844694 MS.gene30256:CDS
AACCGGAGGATAAAGCCTCA+AGG 0.652895 7.3:+64844378 None:intergenic
GCTTGGAATTTAAACCAGAG+AGG 0.654033 7.3:-64844228 MS.gene30256:CDS
GTAAAACAACAGAAACACTT+GGG 0.655253 7.3:+64844032 None:intergenic
GGAAGGGTCGAGGAAATATG+GGG 0.657726 7.3:-64844259 MS.gene30256:CDS
TTATGCTCTAAAGGAACCGG+AGG 0.659244 7.3:+64844364 None:intergenic
ACCAATCACAAAATGGCCTG+TGG 0.663323 7.3:-64845370 MS.gene30256:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATGTTATGTAGTTTT+AGG - chr7.3:64844522-64844541 MS.gene30256:CDS 15.0%
!! AAACTAAGTTTAGATAATCA+TGG + chr7.3:64844134-64844153 None:intergenic 20.0%
!! AGCAAGTTAATTTATTTACA+TGG - chr7.3:64845023-64845042 MS.gene30256:CDS 20.0%
!! TACATAACATATATTGTCAA+AGG + chr7.3:64844517-64844536 None:intergenic 20.0%
!!! AACTTAGTTTTGAAACAAAA+AGG - chr7.3:64844144-64844163 MS.gene30256:CDS 20.0%
! AATATCATTATGAATGAAGC+AGG - chr7.3:64844789-64844808 MS.gene30256:CDS 25.0%
! AGTTCAATAGAAAGACAATT+AGG + chr7.3:64844555-64844574 None:intergenic 25.0%
! ATTGAGAAAAAACTGTTTAG+TGG - chr7.3:64844417-64844436 MS.gene30256:CDS 25.0%
! GAACATAATTGGAAAGATTT+AGG - chr7.3:64844987-64845006 MS.gene30256:CDS 25.0%
! GTTTAGATAATCATGGATAT+TGG + chr7.3:64844127-64844146 None:intergenic 25.0%
! TTGATCATGCTTGTAAAAAA+GGG - chr7.3:64844454-64844473 MS.gene30256:CDS 25.0%
!! ATGTAAAACCAAGATTTTAC+TGG - chr7.3:64844634-64844653 MS.gene30256:CDS 25.0%
!!! ACTAAACAGTTTTTTCTCAA+TGG + chr7.3:64844418-64844437 None:intergenic 25.0%
!!! ATTTGCAAGATGTTTTTCAA+AGG - chr7.3:64844487-64844506 MS.gene30256:CDS 25.0%
!!! TTAGTTTTGAAACAAAAAGG+AGG - chr7.3:64844147-64844166 MS.gene30256:CDS 25.0%
AAAGCAATGAACTTGTAAGA+GGG + chr7.3:64845269-64845288 None:intergenic 30.0%
AAATCCAAAACAGAAATGCA+AGG - chr7.3:64844744-64844763 MS.gene30256:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG - chr7.3:64845325-64845344 MS.gene30256:CDS 30.0%
AATGCAGATTTATGCTCTAA+AGG + chr7.3:64845086-64845105 None:intergenic 30.0%
AGCACAAAATTCGAAAACTA+CGG - chr7.3:64844252-64844271 MS.gene30256:CDS 30.0%
CTTGATCATGCTTGTAAAAA+AGG - chr7.3:64844453-64844472 MS.gene30256:CDS 30.0%
GTAAAACAACAGAAACACTT+GGG + chr7.3:64845409-64845428 None:intergenic 30.0%
GTTGAATTATCACATTCAAG+TGG - chr7.3:64845364-64845383 MS.gene30256:CDS 30.0%
TACCATCAAGAGAACATAAT+TGG - chr7.3:64844976-64844995 MS.gene30256:CDS 30.0%
TGTAAAACAACAGAAACACT+TGG + chr7.3:64845410-64845429 None:intergenic 30.0%
TTCCAATTATGTTCTCTTGA+TGG + chr7.3:64844981-64845000 None:intergenic 30.0%
! TTAGGTCTGATTTTCACATT+TGG - chr7.3:64844325-64844344 MS.gene30256:CDS 30.0%
! TTTTCCTTGCAATCCATTAT+TGG - chr7.3:64844028-64844047 MS.gene30256:CDS 30.0%
!! GTTGTTTTACACATGAAACA+TGG - chr7.3:64845419-64845438 MS.gene30256:CDS 30.0%
!!! AGTGAGATTTTTGAAATCCT+TGG - chr7.3:64844291-64844310 MS.gene30256:CDS 30.0%
!!! ATTTTTGAAATCCTTGGAGA+TGG - chr7.3:64844297-64844316 MS.gene30256:CDS 30.0%
AAATTCGAAAACTACGGGAA+AGG - chr7.3:64844258-64844277 MS.gene30256:CDS 35.0%
AACAGAAACACTTGGGATTA+TGG + chr7.3:64845402-64845421 None:intergenic 35.0%
AAGTTCATTGCTTTCAATGC+TGG - chr7.3:64845275-64845294 MS.gene30256:CDS 35.0%
ACAGAAACACTTGGGATTAT+GGG + chr7.3:64845401-64845420 None:intergenic 35.0%
ACCTAAAAATTCCATCTCCA+AGG + chr7.3:64844311-64844330 None:intergenic 35.0%
AGAATCTTCGCTTCAACAAA+AGG + chr7.3:64844936-64844955 None:intergenic 35.0%
ATTATGAATGAAGCAGGAGA+TGG - chr7.3:64844795-64844814 MS.gene30256:CDS 35.0%
CTCAAAAACTCGTCATCTAT+TGG + chr7.3:64844828-64844847 None:intergenic 35.0%
GAAACACACCAATCACAAAA+TGG - chr7.3:64844061-64844080 MS.gene30256:CDS 35.0%
GAAAGCAATGAACTTGTAAG+AGG + chr7.3:64845270-64845289 None:intergenic 35.0%
GAATCTTCGCTTCAACAAAA+GGG + chr7.3:64844935-64844954 None:intergenic 35.0%
GAATTATCACATTCAAGTGG+TGG - chr7.3:64845367-64845386 MS.gene30256:CDS 35.0%
GCACAAAATTCGAAAACTAC+GGG - chr7.3:64844253-64844272 MS.gene30256:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG - chr7.3:64844997-64845016 MS.gene30256:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG - chr7.3:64844996-64845015 MS.gene30256:CDS 35.0%
TTCTATTGAGCCTCCAATAA+TGG + chr7.3:64844044-64844063 None:intergenic 35.0%
TTGTAAAAAAGGGATGCAAG+TGG - chr7.3:64844464-64844483 MS.gene30256:CDS 35.0%
! ACGTTCATGTTTGATAACCA+TGG + chr7.3:64844192-64844211 None:intergenic 35.0%
! TCCTTGGAGATGGAATTTTT+AGG - chr7.3:64844307-64844326 MS.gene30256:CDS 35.0%
! TTTCAAGCAGGAAAGTTTTC+AGG - chr7.3:64844377-64844396 MS.gene30256:CDS 35.0%
!! ACTTCGTTCAATTTTCAAGC+AGG - chr7.3:64844365-64844384 MS.gene30256:CDS 35.0%
!! CATTCATTTTTGAAGGACCA+TGG - chr7.3:64844172-64844191 MS.gene30256:CDS 35.0%
!! GATTTATGCTCTAAAGGAAC+CGG + chr7.3:64845080-64845099 None:intergenic 35.0%
!! GGAGGAACATTCATTTTTGA+AGG - chr7.3:64844165-64844184 MS.gene30256:CDS 35.0%
AAATCTGATGTGCTTCCTAG+TGG - chr7.3:64845107-64845126 MS.gene30256:CDS 40.0%
AATATGGGGAGAAGATTGCT+TGG - chr7.3:64845193-64845212 MS.gene30256:CDS 40.0%
AATCTGATGTGCTTCCTAGT+GGG - chr7.3:64845108-64845127 MS.gene30256:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG - chr7.3:64845427-64845446 MS.gene30256:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG + chr7.3:64844902-64844921 None:intergenic 40.0%
CTCTCTCACATGCAATTTCA+GGG + chr7.3:64844578-64844597 None:intergenic 40.0%
GACATGTTGTATAAGAGACC+AGG + chr7.3:64844105-64844124 None:intergenic 40.0%
GCTTGGAATTTAAACCAGAG+AGG - chr7.3:64845210-64845229 MS.gene30256:CDS 40.0%
GGAAAAGAAAAACCGCCAAA+AGG + chr7.3:64844014-64844033 None:intergenic 40.0%
GTGTATTCTCTATACTCCGT+CGG - chr7.3:64845158-64845177 MS.gene30256:CDS 40.0%
TCCTTGCAATCCATTATTGG+AGG - chr7.3:64844031-64844050 MS.gene30256:CDS 40.0%
TCGATTAATCTACTTGCAGC+CGG - chr7.3:64844855-64844874 MS.gene30256:CDS 40.0%
TGCAGCTTCCAGTAAAATCT+TGG + chr7.3:64844645-64844664 None:intergenic 40.0%
TGGAATTTAAACCAGAGAGG+TGG - chr7.3:64845213-64845232 MS.gene30256:CDS 40.0%
TTCTTAGAAATCCACCTCTC+TGG + chr7.3:64845227-64845246 None:intergenic 40.0%
TTTACTGGAAGCTGCAGAAA+TGG - chr7.3:64844649-64844668 MS.gene30256:CDS 40.0%
! AGGTGGATTTCTAAGAAAGG+AGG - chr7.3:64845230-64845249 MS.gene30256:CDS 40.0%
! CATTGGAGAAATCCTTTTGG+CGG - chr7.3:64843999-64844018 MS.gene30256:CDS 40.0%
! CTGCAGAAATGGTTTCAAGT+TGG - chr7.3:64844660-64844679 MS.gene30256:CDS 40.0%
! CTGTCCTTGCATTTCTGTTT+TGG + chr7.3:64844751-64844770 None:intergenic 40.0%
! GAGAGGTGGATTTCTAAGAA+AGG - chr7.3:64845227-64845246 MS.gene30256:CDS 40.0%
! GGTGGATTTCTAAGAAAGGA+GGG - chr7.3:64845231-64845250 MS.gene30256:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG - chr7.3:64844899-64844918 MS.gene30256:CDS 40.0%
!! GAGAGCATTTACTCAAGTAG+AGG - chr7.3:64844593-64844612 MS.gene30256:CDS 40.0%
!! TGGCATTGGAGAAATCCTTT+TGG - chr7.3:64843996-64844015 MS.gene30256:CDS 40.0%
!!! TACTTGGTTTTTCTGGTTGG+TGG - chr7.3:64844902-64844921 MS.gene30256:CDS 40.0%
AATCACAAAATGGCCTGTGG+TGG - chr7.3:64844071-64844090 MS.gene30256:CDS 45.0%
ACCAAGGAGTTGTTTGGGAA+AGG - chr7.3:64845298-64845317 MS.gene30256:CDS 45.0%
ACCAATCACAAAATGGCCTG+TGG - chr7.3:64844068-64844087 MS.gene30256:CDS 45.0%
ATCACAAAATGGCCTGTGGT+GGG - chr7.3:64844072-64844091 MS.gene30256:CDS 45.0%
ATTCTCTATACTCCGTCGGA+AGG - chr7.3:64845162-64845181 MS.gene30256:CDS 45.0%
CGAGCTAATAGTGTCTCTTC+CGG + chr7.3:64844877-64844896 None:intergenic 45.0%
CGGAAGAGACACTATTAGCT+CGG - chr7.3:64844875-64844894 MS.gene30256:CDS 45.0%
GATTTAACCCTATGCCCACT+AGG + chr7.3:64845125-64845144 None:intergenic 45.0%
GCTCTCTCACATGCAATTTC+AGG + chr7.3:64844579-64844598 None:intergenic 45.0%
GGAAGAGACACTATTAGCTC+GGG - chr7.3:64844876-64844895 MS.gene30256:CDS 45.0%
GTGATGTGTTGCACGTTCAT+GGG + chr7.3:64844231-64844250 None:intergenic 45.0%
TCCTTTCCCAAACAACTCCT+TGG + chr7.3:64845302-64845321 None:intergenic 45.0%
TGATGTGTTGCACGTTCATG+GGG + chr7.3:64844230-64844249 None:intergenic 45.0%
TGTGATGTGTTGCACGTTCA+TGG + chr7.3:64844232-64844251 None:intergenic 45.0%
TTCTCTATACTCCGTCGGAA+GGG - chr7.3:64845163-64845182 MS.gene30256:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG - chr7.3:64845282-64845301 MS.gene30256:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG - chr7.3:64845045-64845064 MS.gene30256:CDS 45.0%
!! ACCACAGGCCATTTTGTGAT+TGG + chr7.3:64844072-64844091 None:intergenic 45.0%
!! GCCTCCAATAATGGATTGCA+AGG + chr7.3:64844035-64844054 None:intergenic 45.0%
!! TTATGCTCTAAAGGAACCGG+AGG + chr7.3:64845077-64845096 None:intergenic 45.0%
AACCGGAGGATAAAGCCTCA+AGG + chr7.3:64845063-64845082 None:intergenic 50.0%
CGGAAGGGTCGAGGAAATAT+GGG - chr7.3:64845178-64845197 MS.gene30256:CDS 50.0%
CTATTAGCTCGGGCCTTACT+TGG - chr7.3:64844886-64844905 MS.gene30256:CDS 50.0%
GCTGGACCAAGGAGTTGTTT+GGG - chr7.3:64845293-64845312 MS.gene30256:CDS 50.0%
GGAAGGGTCGAGGAAATATG+GGG - chr7.3:64845179-64845198 MS.gene30256:CDS 50.0%
TATTTCCTCGACCCTTCCGA+CGG + chr7.3:64845177-64845196 None:intergenic 50.0%
TCGGAAGGGTCGAGGAAATA+TGG - chr7.3:64845177-64845196 MS.gene30256:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG - chr7.3:64845292-64845311 MS.gene30256:CDS 50.0%
! AGCCTTGAGGCTTTATCCTC+CGG - chr7.3:64845058-64845077 MS.gene30256:CDS 50.0%
! ATGTGCTTCCTAGTGGGCAT+AGG - chr7.3:64845114-64845133 MS.gene30256:CDS 50.0%
! TGTGCTTCCTAGTGGGCATA+GGG - chr7.3:64845115-64845134 MS.gene30256:CDS 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG - chr7.3:64844895-64844914 MS.gene30256:CDS 50.0%
TTGCACGTTCATGGGGTCAC+TGG + chr7.3:64844223-64844242 None:intergenic 55.0%
ATACTCCGTCGGAAGGGTCG+AGG - chr7.3:64845169-64845188 MS.gene30256:CDS 60.0%
CCAGGTAGCATTCCCACCAC+AGG + chr7.3:64844087-64844106 None:intergenic 60.0%
! CCTGTGGTGGGAATGCTACC+TGG - chr7.3:64844084-64844103 MS.gene30256:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 64843985 64845475 64843985 ID=MS.gene30256
chr7.3 mRNA 64843985 64845475 64843985 ID=MS.gene30256.t1;Parent=MS.gene30256
chr7.3 exon 64843985 64845475 64843985 ID=MS.gene30256.t1.exon1;Parent=MS.gene30256.t1
chr7.3 CDS 64843985 64845475 64843985 ID=cds.MS.gene30256.t1;Parent=MS.gene30256.t1
Gene Sequence

>MS.gene30256

ATGTACATGTTTGGCATTGGAGAAATCCTTTTGGCGGTTTTTCTTTTCCTTGCAATCCATTATTGGAGGCTCAATAGAAACACACCAATCACAAAATGGCCTGTGGTGGGAATGCTACCTGGTCTCTTATACAACATGTCCAATATCCATGATTATCTAAACTTAGTTTTGAAACAAAAAGGAGGAACATTCATTTTTGAAGGACCATGGTTATCAAACATGAACGTTCTTTGCACCAGTGACCCCATGAACGTGCAACACATCACAAGCACAAAATTCGAAAACTACGGGAAAGGAAACAATTTCAGTGAGATTTTTGAAATCCTTGGAGATGGAATTTTTAGGTCTGATTTTCACATTTGGAAGTACAACAGAACACTACTTCGTTCAATTTTCAAGCAGGAAAGTTTTCAGGTATTTATTCACAAAACCATTGAGAAAAAACTGTTTAGTGGTCTTCTTGTATTTCTTGATCATGCTTGTAAAAAAGGGATGCAAGTGGATTTGCAAGATGTTTTTCAAAGGTTAACCTTTGACAATATATGTTATGTAGTTTTAGGATTTGATCCTAATTGTCTTTCTATTGAACTCCCTGAAATTGCATGTGAGAGAGCATTTACTCAAGTAGAGGACACATTGTTTTCTAGACATGTAAAACCAAGATTTTACTGGAAGCTGCAGAAATGGTTTCAAGTTGGTGAAGAGAAACAGTTTATAAAGAATCAGAAAATTATTGATGAAATGTTGTATTCAGAAATCAAATCCAAAACAGAAATGCAAGGACAGCAAAAAGTTGACTTGCTAAATATCATTATGAATGAAGCAGGAGATGGAGAAAATCCAATAGATGACGAGTTTTTGAGAGATACATCGATTAATCTACTTGCAGCCGGAAGAGACACTATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTGGCAACACACCCTTTTGTTGAAGCGAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAGAACATAATTGGAAAGATTTAGGAGCAAAAGGGCTTAGCAAGTTAATTTATTTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCTCCGGTTCCTTTAGAGCATAAATCTGCATTAAAATCTGATGTGCTTCCTAGTGGGCATAGGGTTAAATCAGATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTCGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAGAGGTGGATTTCTAAGAAAGGAGGGACAATTCATGTTCCCTCTTACAAGTTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGAAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTGTTTCTGTTGTTTTACACATGAAACATGGCTTGAAGGTTTATGTCAAAAAAAGAAGCATTTAA

Protein sequence

>MS.gene30256.t1

MYMFGIGEILLAVFLFLAIHYWRLNRNTPITKWPVVGMLPGLLYNMSNIHDYLNLVLKQKGGTFIFEGPWLSNMNVLCTSDPMNVQHITSTKFENYGKGNNFSEIFEILGDGIFRSDFHIWKYNRTLLRSIFKQESFQVFIHKTIEKKLFSGLLVFLDHACKKGMQVDLQDVFQRLTFDNICYVVLGFDPNCLSIELPEIACERAFTQVEDTLFSRHVKPRFYWKLQKWFQVGEEKQFIKNQKIIDEMLYSEIKSKTEMQGQQKVDLLNIIMNEAGDGENPIDDEFLRDTSINLLAAGRDTISSGLTWFFWLVATHPFVEAKILEEIKENLPSREHNWKDLGAKGLSKLIYLHGALCEALRLYPPVPLEHKSALKSDVLPSGHRVKSDTMIVYSLYSVGRVEEIWGEDCLEFKPERWISKKGGTIHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSVSVVLHMKHGLKVYVKKRSI