AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041216


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041216.t1 MTR_7g033580 95.981 423 17 0 1 423 74 496 0.0 841
MS.gene041216.t1 MTR_7g033570 88.416 423 49 0 1 423 74 496 0.0 779
MS.gene041216.t1 MTR_8g088470 83.452 423 69 1 1 422 70 492 0.0 740
MS.gene041216.t1 MTR_6g004670 59.112 428 168 3 1 421 78 505 0.0 517
MS.gene041216.t1 MTR_6g004630 57.576 429 175 3 1 423 78 505 2.45e-179 510
MS.gene041216.t1 MTR_6g004610 56.808 426 177 3 1 420 38 462 1.60e-178 506
MS.gene041216.t1 MTR_1g035670 54.651 430 186 3 2 423 76 504 2.33e-172 492
MS.gene041216.t1 MTR_6g004590 53.288 441 187 5 1 423 78 517 1.13e-170 488
MS.gene041216.t1 MTR_1g036130 52.887 433 193 3 2 423 76 508 1.77e-169 485
MS.gene041216.t1 MTR_6g004600 53.061 441 188 4 1 423 78 517 2.45e-169 485
MS.gene041216.t1 MTR_1g035790 55.349 430 183 4 2 423 76 504 8.18e-167 478
MS.gene041216.t1 MTR_1g035760 52.336 428 176 5 2 423 76 481 1.54e-163 469
MS.gene041216.t1 MTR_1g036200 54.651 430 181 6 4 423 76 501 6.85e-163 468
MS.gene041216.t1 MTR_1g035580 54.920 437 169 7 2 423 75 498 2.15e-162 466
MS.gene041216.t1 MTR_1g035800 54.005 437 184 5 2 421 76 512 5.02e-162 466
MS.gene041216.t1 MTR_1g035750 53.580 433 186 3 4 423 77 507 6.28e-159 458
MS.gene041216.t1 MTR_1g036270 52.847 439 189 5 2 423 76 513 2.12e-157 454
MS.gene041216.t1 MTR_1g050362 53.103 435 185 7 3 421 75 506 2.20e-156 451
MS.gene041216.t1 MTR_1g035830 51.147 436 199 4 1 423 75 509 2.42e-155 449
MS.gene041216.t1 MTR_1g036010 50.461 434 203 5 2 423 76 509 1.06e-151 440
MS.gene041216.t1 MTR_1g035940 48.736 435 209 4 2 423 76 509 8.61e-149 432
MS.gene041216.t1 MTR_1g069715 51.471 408 181 6 10 402 1 406 4.12e-147 434
MS.gene041216.t1 MTR_4g012320 81.778 225 41 0 199 423 1 225 2.53e-136 390
MS.gene041216.t1 MTR_1g035860 47.967 369 183 3 3 363 83 450 3.33e-125 372
MS.gene041216.t1 MTR_1g037560 42.069 435 238 4 1 421 109 543 1.37e-119 359
MS.gene041216.t1 MTR_1g037550 40.868 438 241 5 2 421 110 547 5.31e-117 353
MS.gene041216.t1 MTR_4g075110 40.920 435 242 5 1 421 116 549 1.95e-115 348
MS.gene041216.t1 MTR_8g030590 40.275 437 240 8 3 423 81 512 4.58e-106 324
MS.gene041216.t1 MTR_5g070010 39.161 429 249 5 4 423 85 510 9.33e-106 322
MS.gene041216.t1 MTR_8g098435 39.352 432 246 7 3 423 81 507 1.03e-99 307
MS.gene041216.t1 MTR_3g463060 37.705 427 247 5 4 423 90 504 1.80e-98 303
MS.gene041216.t1 MTR_1g060550 37.296 429 249 10 4 421 93 512 1.84e-84 268
MS.gene041216.t1 MTR_7g096340 34.346 428 261 8 4 421 85 502 3.15e-84 266
MS.gene041216.t1 MTR_7g096320 34.426 427 262 7 4 421 86 503 3.78e-83 264
MS.gene041216.t1 MTR_3g080580 35.227 440 255 10 4 421 86 517 3.87e-83 265
MS.gene041216.t1 MTR_4g119660 35.570 447 253 8 7 422 74 516 4.47e-83 264
MS.gene041216.t1 MTR_5g019140 35.570 447 253 8 7 422 89 531 1.46e-82 263
MS.gene041216.t1 MTR_1g070365 35.499 431 253 8 4 421 86 504 4.79e-82 261
MS.gene041216.t1 MTR_7g088330 37.500 432 248 11 4 421 85 508 7.74e-81 258
MS.gene041216.t1 MTR_8g035780 34.101 434 265 9 4 421 82 510 3.67e-80 256
MS.gene041216.t1 MTR_4g054920 34.404 436 256 10 6 422 93 517 1.05e-79 255
MS.gene041216.t1 MTR_7g029275 35.035 431 259 7 4 421 86 508 1.19e-79 255
MS.gene041216.t1 MTR_1g070345 35.253 434 252 9 4 422 86 505 1.34e-79 254
MS.gene041216.t1 MTR_2g086040 33.726 424 262 8 1 418 85 495 2.03e-78 251
MS.gene041216.t1 MTR_8g035820 33.487 433 267 10 6 422 83 510 2.27e-77 249
MS.gene041216.t1 MTR_8g035860 34.180 433 264 10 6 422 83 510 5.79e-77 248
MS.gene041216.t1 MTR_8g035810 33.257 436 264 10 6 422 84 511 5.55e-76 245
MS.gene041216.t1 MTR_1g102220 32.710 428 265 8 4 416 82 501 4.19e-75 243
MS.gene041216.t1 MTR_8g035760 31.235 429 269 10 4 416 88 506 1.23e-67 223
MS.gene041216.t1 MTR_8g035680 30.607 428 274 9 4 416 88 507 5.51e-67 222
MS.gene041216.t1 MTR_8g035810 32.979 376 226 9 6 363 84 451 6.64e-62 207
MS.gene041216.t1 MTR_7g406990 38.235 306 178 5 1 296 92 396 1.59e-61 206
MS.gene041216.t1 MTR_8g035680 29.683 347 223 7 84 416 21 360 3.72e-53 181
MS.gene041216.t1 MTR_1g102210 29.674 337 192 7 94 416 51 356 1.32e-45 161
MS.gene041216.t1 MTR_1g070370 35.714 252 141 5 95 339 5 242 4.93e-44 154
MS.gene041216.t1 MTR_8g035810 30.945 307 189 7 6 295 84 384 7.06e-40 147
MS.gene041216.t1 MTR_7g079440 27.650 434 275 16 7 421 235 648 3.27e-36 141
MS.gene041216.t1 MTR_5g009110 26.371 474 275 17 4 422 117 571 5.45e-36 139
MS.gene041216.t1 MTR_5g009110 25.624 441 256 15 36 422 1 423 2.83e-32 127
MS.gene041216.t1 MTR_1g062190 24.490 441 291 14 2 421 120 539 7.26e-30 121
MS.gene041216.t1 MTR_7g079440 28.249 354 219 12 7 344 235 569 5.29e-28 116
MS.gene041216.t1 MTR_1g050590 42.857 119 62 2 171 284 1 118 1.49e-25 100
MS.gene041216.t1 MTR_1g101040 29.889 271 175 7 155 419 252 513 2.47e-25 108
MS.gene041216.t1 MTR_5g009110 28.783 337 191 13 4 311 117 433 3.37e-25 107
MS.gene041216.t1 MTR_2g062670 34.123 211 124 6 56 264 36 233 4.10e-25 107
MS.gene041216.t1 MTR_7g006900 27.706 231 148 5 193 419 255 470 1.74e-24 105
MS.gene041216.t1 MTR_6g072490 29.861 288 183 9 139 419 236 511 1.99e-24 105
MS.gene041216.t1 MTR_1g040110 42.735 117 64 1 46 159 51 167 1.03e-23 97.4
MS.gene041216.t1 MTR_1g101050 28.889 270 179 7 155 419 248 509 1.03e-23 103
MS.gene041216.t1 MTR_8g046580 46.078 102 52 2 296 396 193 292 4.48e-23 99.0
MS.gene041216.t1 MTR_6g084040 45.794 107 39 2 4 109 77 165 1.24e-22 94.4
MS.gene041216.t1 MTR_2g010250 27.273 297 194 9 141 421 215 505 1.50e-22 100
MS.gene041216.t1 MTR_6g017325 24.190 401 255 14 36 419 137 505 1.08e-21 97.4
MS.gene041216.t1 MTR_5g009110 27.815 302 175 10 36 311 1 285 1.86e-21 94.7
MS.gene041216.t1 MTR_1g085680 23.516 438 284 13 4 419 106 514 3.49e-21 96.3
MS.gene041216.t1 MTR_3g014880 24.031 387 262 12 56 421 148 523 1.38e-20 94.4
MS.gene041216.t1 MTR_3g093530 21.986 423 307 11 6 420 116 523 1.70e-20 94.0
MS.gene041216.t1 MTR_4g113650 22.970 431 304 9 4 423 108 521 1.73e-20 94.0
MS.gene041216.t1 MTR_2g072270 23.709 426 272 14 21 420 124 522 2.45e-20 93.6
MS.gene041216.t1 MTR_6g008500 25.460 326 200 13 92 392 194 501 3.07e-20 93.2
MS.gene041216.t1 MTR_2g072400 24.083 436 287 17 4 420 105 515 7.16e-20 92.0
MS.gene041216.t1 MTR_2g010290 26.644 289 190 9 141 421 258 532 8.36e-20 92.0
MS.gene041216.t1 MTR_4g104610 23.714 350 235 10 84 414 155 491 8.62e-20 91.7
MS.gene041216.t1 MTR_8g008530 25.197 254 171 5 178 420 273 518 1.82e-19 90.9
MS.gene041216.t1 MTR_6g008530 28.085 235 147 6 170 392 271 495 2.63e-19 90.5
MS.gene041216.t1 MTR_8g104030 25.000 244 157 6 160 387 8 241 3.99e-19 87.4
MS.gene041216.t1 MTR_8g042000 23.266 447 276 16 4 420 114 523 4.82e-19 89.7
MS.gene041216.t1 MTR_8g098565 24.632 272 190 6 163 421 237 506 5.25e-19 89.4
MS.gene041216.t1 MTR_7g012860 27.350 234 152 7 162 389 241 462 6.24e-19 89.4
MS.gene041216.t1 MTR_0287s0060 27.350 234 152 7 162 389 241 462 6.24e-19 89.4
MS.gene041216.t1 MTR_5g070920 27.444 266 176 7 160 416 233 490 8.07e-19 89.0
MS.gene041216.t1 MTR_1g015860 28.916 249 165 6 180 422 287 529 8.07e-19 89.0
MS.gene041216.t1 MTR_6g008650 26.923 260 172 8 153 400 246 499 1.45e-18 88.2
MS.gene041216.t1 MTR_2g072340 22.676 441 287 18 4 420 105 515 1.68e-18 87.8
MS.gene041216.t1 MTR_8g035790 41.414 99 54 3 325 421 1 97 2.86e-18 80.1
MS.gene041216.t1 MTR_6g084770 29.167 240 152 6 160 387 233 466 2.87e-18 87.0
MS.gene041216.t1 MTR_0025s0110 25.490 255 177 5 169 419 279 524 3.27e-18 87.0
MS.gene041216.t1 MTR_6g008600 31.050 219 126 8 170 376 270 475 3.68e-18 87.0
MS.gene041216.t1 MTR_2g010380 24.419 258 183 5 149 396 227 482 5.26e-18 86.3
MS.gene041216.t1 MTR_8g104100 25.221 226 153 5 169 387 6 222 5.64e-18 84.0
MS.gene041216.t1 MTR_5g034900 24.013 304 206 6 141 421 216 517 6.86e-18 86.3
MS.gene041216.t1 MTR_6g042610 24.534 322 225 9 92 400 177 493 8.23e-18 85.9
MS.gene041216.t1 MTR_2g055430 28.141 199 132 4 224 420 328 517 1.23e-17 85.5
MS.gene041216.t1 MTR_5g070690 25.911 247 166 5 167 403 238 477 1.36e-17 85.1
MS.gene041216.t1 MTR_5g070800 25.911 247 166 5 167 403 238 477 1.36e-17 85.1
MS.gene041216.t1 MTR_7g079440 27.652 264 163 9 7 254 235 486 1.81e-17 84.7
MS.gene041216.t1 MTR_8g063280 26.609 233 162 6 164 390 235 464 2.02e-17 84.7
MS.gene041216.t1 MTR_0147s0030 23.168 423 286 14 7 414 126 524 2.47e-17 84.3
MS.gene041216.t1 MTR_2g010280 25.965 285 197 6 149 421 221 503 2.74e-17 84.3
MS.gene041216.t1 MTR_2g055470 29.902 204 122 5 224 420 328 517 2.78e-17 84.3
MS.gene041216.t1 MTR_8g042060 26.733 202 131 4 224 420 298 487 2.94e-17 84.0
MS.gene041216.t1 MTR_8g042060 26.733 202 131 4 224 420 334 523 3.25e-17 84.0
MS.gene041216.t1 MTR_5g095230 22.837 416 265 15 31 420 128 513 3.49e-17 84.0
MS.gene041216.t1 MTR_6g008640 23.913 322 221 9 94 400 185 497 3.53e-17 84.0
MS.gene041216.t1 MTR_5g070830 28.070 228 149 5 170 387 353 575 3.54e-17 84.3
MS.gene041216.t1 MTR_1g036140 42.000 100 52 2 174 268 68 166 3.90e-17 79.0
MS.gene041216.t1 MTR_2g010330 23.891 293 209 6 141 421 217 507 4.32e-17 83.6
MS.gene041216.t1 MTR_6g008430 32.335 167 105 5 211 376 307 466 5.34e-17 83.6
MS.gene041216.t1 MTR_6g042540 26.718 262 166 9 155 400 241 492 5.45e-17 83.2
MS.gene041216.t1 MTR_4g062510 23.885 314 195 9 107 387 175 477 6.27e-17 83.2
MS.gene041216.t1 MTR_6g008620 25.000 292 195 9 92 369 187 468 6.80e-17 83.2
MS.gene041216.t1 MTR_0181s0030 26.724 232 159 6 171 397 248 473 9.10e-17 82.8
MS.gene041216.t1 MTR_8g042020 26.733 202 131 5 224 420 333 522 9.84e-17 82.4
MS.gene041216.t1 MTR_2g061200 26.407 231 153 6 198 420 307 528 1.17e-16 82.4
MS.gene041216.t1 MTR_2g072310 27.132 258 163 9 178 420 103 350 1.57e-16 80.9
MS.gene041216.t1 MTR_1g022040 22.014 427 291 12 7 420 105 502 1.67e-16 81.6
MS.gene041216.t1 MTR_6g022450 24.340 341 227 10 92 420 177 498 1.80e-16 81.6
MS.gene041216.t1 MTR_8g036185 24.691 324 218 9 94 397 172 489 1.87e-16 81.6
MS.gene041216.t1 MTR_2g072380 27.638 199 133 4 224 420 161 350 1.95e-16 80.5
MS.gene041216.t1 MTR_3g104560 29.958 237 152 7 193 422 173 402 1.99e-16 80.9
MS.gene041216.t1 MTR_2g072250 27.941 272 158 11 172 420 257 513 2.06e-16 81.6
MS.gene041216.t1 MTR_2g061750 30.000 190 108 7 1 171 12 195 2.19e-16 77.8
MS.gene041216.t1 MTR_2g023680 26.633 199 135 4 224 420 328 517 2.34e-16 81.3
MS.gene041216.t1 MTR_2g061740 30.000 190 108 7 1 171 12 195 2.39e-16 77.8
MS.gene041216.t1 MTR_8g076290 25.822 213 138 6 172 371 245 450 2.62e-16 81.3
MS.gene041216.t1 MTR_4g094775 22.571 319 232 6 85 400 161 467 3.27e-16 80.9
MS.gene041216.t1 MTR_5g070710 25.581 258 176 6 167 416 239 488 4.68e-16 80.5
MS.gene041216.t1 MTR_2g072380 27.638 199 133 4 224 420 301 490 4.71e-16 80.5
MS.gene041216.t1 MTR_4g089055 25.773 291 197 9 89 371 181 460 5.38e-16 80.5
MS.gene041216.t1 MTR_3g104560 29.958 237 152 7 193 422 308 537 5.56e-16 80.5
MS.gene041216.t1 MTR_0171s0020 25.540 278 183 8 131 396 208 473 5.57e-16 80.1
MS.gene041216.t1 MTR_4g104540 30.952 168 102 4 208 371 219 376 6.89e-16 79.7
MS.gene041216.t1 MTR_4g018800 24.746 295 194 10 94 371 187 470 6.89e-16 80.1
MS.gene041216.t1 MTR_6g004570 42.991 107 41 3 170 259 6 109 6.90e-16 77.4
MS.gene041216.t1 MTR_7g087520 27.755 245 153 10 160 389 241 476 7.30e-16 79.7
MS.gene041216.t1 MTR_7g098550 22.611 429 288 12 4 422 104 498 8.68e-16 79.7
MS.gene041216.t1 MTR_5g073250 25.472 212 144 4 183 390 263 464 9.14e-16 79.7
MS.gene041216.t1 MTR_1g069200 22.963 270 187 6 161 419 251 510 1.27e-15 79.0
MS.gene041216.t1 MTR_7g012330 24.348 230 155 6 173 396 253 469 1.30e-15 79.0
MS.gene041216.t1 MTR_7g098550 22.378 429 297 12 4 422 104 506 1.35e-15 79.0
MS.gene041216.t1 MTR_0171s0030 25.581 258 173 8 149 394 138 388 1.41e-15 78.6
MS.gene041216.t1 MTR_5g073320 26.415 212 142 4 183 390 264 465 1.63e-15 79.0
MS.gene041216.t1 MTR_3g076530 25.758 264 172 9 167 419 251 501 1.91e-15 78.6
MS.gene041216.t1 MTR_2g010300 24.561 285 187 7 149 421 221 489 2.59e-15 78.2
MS.gene041216.t1 MTR_4g104550 25.000 296 201 8 84 371 155 437 3.25e-15 77.8
MS.gene041216.t1 MTR_2g062680 31.788 151 68 3 212 357 31 151 3.35e-15 74.3
MS.gene041216.t1 MTR_7g103450 28.750 240 152 9 187 420 280 506 4.88e-15 77.4
MS.gene041216.t1 MTR_7g075610 28.641 206 127 6 193 390 274 467 5.35e-15 77.0
MS.gene041216.t1 MTR_5g070700 25.573 262 173 7 167 416 240 491 5.69e-15 77.0
MS.gene041216.t1 MTR_8g012585 23.256 258 186 5 171 421 197 449 5.75e-15 77.0
MS.gene041216.t1 MTR_2g010320 23.973 292 200 9 144 421 220 503 7.80e-15 76.6
MS.gene041216.t1 MTR_4g104570 31.613 155 92 4 221 371 1 145 8.00e-15 73.2
MS.gene041216.t1 MTR_6g084900 23.810 231 161 5 167 387 3 228 1.03e-14 74.3
MS.gene041216.t1 MTR_4g077210 22.995 374 253 13 12 375 103 451 1.22e-14 76.3
MS.gene041216.t1 MTR_4g089020 25.850 294 193 11 89 371 159 438 1.50e-14 75.9
MS.gene041216.t1 MTR_5g470730 27.778 198 129 3 160 347 233 426 1.53e-14 75.5
MS.gene041216.t1 MTR_2g072260 26.961 204 128 5 224 420 321 510 1.57e-14 75.9
MS.gene041216.t1 MTR_1g091023 25.455 220 152 6 172 389 248 457 1.58e-14 75.5
MS.gene041216.t1 MTR_1g091003 25.455 220 152 6 172 389 248 457 1.64e-14 75.5
MS.gene041216.t1 MTR_8g012970 27.197 239 158 7 169 406 247 470 1.73e-14 75.5
MS.gene041216.t1 MTR_5g094550 25.943 212 143 4 183 390 263 464 2.14e-14 75.5
MS.gene041216.t1 MTR_1g023730 25.461 271 166 11 169 421 260 512 2.23e-14 75.1
MS.gene041216.t1 MTR_8g042040 26.344 186 120 4 240 420 333 506 2.41e-14 75.1
MS.gene041216.t1 MTR_8g089800 26.639 244 160 7 166 400 237 470 2.46e-14 75.1
MS.gene041216.t1 MTR_3g057860 24.242 264 185 7 162 416 240 497 2.77e-14 75.1
MS.gene041216.t1 MTR_0171s0010 30.180 222 137 8 181 396 266 475 3.06e-14 74.7
MS.gene041216.t1 MTR_8g469360 23.256 430 287 14 8 420 20 423 3.15e-14 74.3
MS.gene041216.t1 MTR_1g091010 25.455 220 152 6 172 389 247 456 3.25e-14 74.7
MS.gene041216.t1 MTR_4g133750 25.532 235 153 7 169 391 244 468 3.91e-14 74.3
MS.gene041216.t1 MTR_4g088400 26.190 252 173 7 155 400 250 494 4.28e-14 74.3
MS.gene041216.t1 MTR_4g048580 28.019 207 132 5 169 371 252 445 5.62e-14 73.9
MS.gene041216.t1 MTR_4g088420 26.519 181 127 3 221 400 31 206 6.25e-14 71.6
MS.gene041216.t1 MTR_5g007460 22.449 245 161 4 153 397 232 447 6.32e-14 73.9
MS.gene041216.t1 MTR_3g436540 27.230 213 139 7 170 377 259 460 8.79e-14 73.6
MS.gene041216.t1 MTR_5g016410 24.390 287 200 8 93 375 169 442 1.66e-13 72.4
MS.gene041216.t1 MTR_5g095290 22.590 332 234 10 65 390 150 464 1.86e-13 72.4
MS.gene041216.t1 MTR_6g035100 25.110 227 160 5 167 390 244 463 1.96e-13 72.4
MS.gene041216.t1 MTR_3g057800 26.180 233 156 6 167 390 238 463 2.30e-13 72.0
MS.gene041216.t1 MTR_5g094540 24.528 212 146 4 183 390 263 464 2.33e-13 72.0
MS.gene041216.t1 MTR_5g094520 25.000 212 145 4 183 390 294 495 3.14e-13 71.6
MS.gene041216.t1 MTR_6g034965 23.810 231 166 5 163 390 240 463 3.31e-13 71.6
MS.gene041216.t1 MTR_5g094520 25.000 212 145 4 183 390 189 390 3.45e-13 71.2
MS.gene041216.t1 MTR_2g072420 29.167 144 94 3 283 423 5 143 3.53e-13 67.0
MS.gene041216.t1 MTR_4g088405 25.357 280 190 6 130 400 139 408 5.93e-13 70.5
MS.gene041216.t1 MTR_1g035140 28.571 231 137 12 171 391 251 463 6.14e-13 70.9
MS.gene041216.t1 MTR_4g089030 25.854 205 143 5 169 371 265 462 6.22e-13 70.9
MS.gene041216.t1 MTR_8g027040 28.571 154 104 5 225 376 348 497 7.15e-13 70.9
MS.gene041216.t1 MTR_0022s0290 28.141 199 135 6 185 382 281 472 7.93e-13 70.5
MS.gene041216.t1 MTR_3g057980 25.217 230 146 9 169 391 249 459 8.34e-13 70.5
MS.gene041216.t1 MTR_5g094560 26.415 212 142 4 183 390 263 464 9.28e-13 70.1
MS.gene041216.t1 MTR_6g008630 26.178 191 135 3 211 400 224 409 1.10e-12 69.7
MS.gene041216.t1 MTR_6g034940 25.203 246 168 7 166 404 230 466 1.12e-12 70.1
MS.gene041216.t1 MTR_3g076560 24.742 194 138 4 180 371 273 460 1.19e-12 70.1
MS.gene041216.t1 MTR_5g007450 23.950 238 142 6 157 390 259 461 1.33e-12 69.7
MS.gene041216.t1 MTR_4g078110 30.769 156 98 4 218 371 275 422 1.59e-12 69.3
MS.gene041216.t1 MTR_2g450040 24.150 294 189 10 120 388 193 477 1.63e-12 69.7
MS.gene041216.t1 MTR_1g107300 24.000 175 117 4 227 396 9 172 1.66e-12 67.0
MS.gene041216.t1 MTR_4g089025 22.472 267 188 7 167 420 257 517 1.72e-12 69.3
MS.gene041216.t1 MTR_5g018500 22.840 162 118 4 233 392 4 160 1.80e-12 66.2
MS.gene041216.t1 MTR_4g088425 28.514 249 165 9 155 397 233 474 2.38e-12 68.9
MS.gene041216.t1 MTR_5g070840 31.933 119 76 2 271 387 21 136 2.50e-12 65.5
MS.gene041216.t1 MTR_7g027960 25.346 217 146 8 181 387 253 463 2.60e-12 68.9
MS.gene041216.t1 MTR_2g031920 25.551 227 160 5 169 395 245 462 3.12e-12 68.6
MS.gene041216.t1 MTR_2g073420 25.112 223 156 5 170 390 258 471 3.45e-12 68.6
MS.gene041216.t1 MTR_3g467140 24.731 186 135 3 193 378 122 302 3.77e-12 67.8
MS.gene041216.t1 MTR_4g026080 27.326 172 115 6 221 390 1 164 4.22e-12 65.5
MS.gene041216.t1 MTR_1g037370 27.488 211 126 9 169 371 248 439 4.51e-12 68.2
MS.gene041216.t1 MTR_7g028020 24.444 225 154 8 181 395 253 471 7.35e-12 67.4
MS.gene041216.t1 MTR_5g056720 26.953 256 147 10 173 416 193 420 7.67e-12 67.0
MS.gene041216.t1 MTR_2g073480 24.887 221 155 5 171 389 164 375 7.76e-12 67.0
MS.gene041216.t1 MTR_5g070850 21.860 215 156 3 174 381 250 459 9.54e-12 67.0
MS.gene041216.t1 MTR_2g073440 24.887 221 155 5 171 389 231 442 9.76e-12 67.0
MS.gene041216.t1 MTR_3g467140 24.731 186 135 3 193 378 255 435 1.12e-11 66.6
MS.gene041216.t1 MTR_2g437840 29.070 172 106 5 211 377 289 449 1.14e-11 67.0
MS.gene041216.t1 MTR_4g095050 24.399 291 198 11 92 375 171 446 1.31e-11 66.6
MS.gene041216.t1 MTR_5g007550 22.449 245 151 6 157 397 259 468 1.37e-11 66.6
MS.gene041216.t1 MTR_5g070973 31.250 112 76 1 271 382 21 131 1.37e-11 63.5
MS.gene041216.t1 MTR_5g010750 20.655 397 281 11 27 421 106 470 1.78e-11 66.2
MS.gene041216.t1 MTR_3g058220 25.000 252 156 11 157 391 229 464 1.94e-11 66.2
MS.gene041216.t1 MTR_4g031820 25.523 239 155 6 193 420 301 527 2.10e-11 66.2
MS.gene041216.t1 MTR_0638s0020 23.492 315 217 9 83 387 90 390 2.25e-11 65.9
MS.gene041216.t1 MTR_1g103670 23.153 203 145 5 171 371 249 442 2.68e-11 65.9
MS.gene041216.t1 MTR_7g075540 27.074 229 139 9 171 390 255 464 3.46e-11 65.5
MS.gene041216.t1 MTR_4g026030 23.661 224 158 6 169 390 96 308 4.27e-11 64.3
MS.gene041216.t1 MTR_4g031820 26.316 171 109 5 260 420 342 505 5.52e-11 64.7
MS.gene041216.t1 MTR_3g076550 24.906 265 167 10 158 417 238 475 5.67e-11 64.7
MS.gene041216.t1 MTR_3g057910 22.477 218 162 4 179 396 263 473 5.85e-11 64.7
MS.gene041216.t1 MTR_2g065360 21.530 353 233 11 70 403 120 447 7.14e-11 64.3
MS.gene041216.t1 MTR_8g468780 22.689 238 168 6 149 376 157 388 7.57e-11 63.9
MS.gene041216.t1 MTR_3g057970 22.467 227 154 8 169 391 246 454 9.43e-11 63.9
MS.gene041216.t1 MTR_3g112120 23.022 417 271 13 24 423 106 489 9.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041216.t1 AT2G23180 49.312 436 207 3 1 422 78 513 2.55e-149 434
MS.gene041216.t1 AT4G39490 48.190 442 210 4 1 423 77 518 1.37e-146 427
MS.gene041216.t1 AT4G39480 47.380 439 215 3 1 423 77 515 6.31e-144 420
MS.gene041216.t1 AT2G21910 46.789 436 216 5 1 423 76 508 2.74e-137 403
MS.gene041216.t1 AT1G47620 46.420 433 218 5 1 421 85 515 2.35e-134 396
MS.gene041216.t1 AT4G39500 44.931 434 222 4 1 421 37 466 1.63e-133 392
MS.gene041216.t1 AT4G39500 44.931 434 222 4 1 421 87 516 1.00e-132 392
MS.gene041216.t1 AT4G32170 44.548 431 226 4 1 421 76 503 4.91e-131 387
MS.gene041216.t1 AT1G65340 45.035 433 217 4 1 420 78 502 9.05e-131 386
MS.gene041216.t1 AT5G52320 45.708 431 214 4 2 420 79 501 2.35e-129 382
MS.gene041216.t1 AT4G39510 43.418 433 230 3 1 421 76 505 1.21e-128 381
MS.gene041216.t1 AT5G52320 45.540 426 212 4 2 415 79 496 6.75e-128 379
MS.gene041216.t1 AT1G57750 43.124 429 225 3 2 421 78 496 8.07e-126 373
MS.gene041216.t1 AT5G02900 41.419 437 216 7 1 421 67 479 2.31e-109 330
MS.gene041216.t1 AT5G08250 39.773 440 243 8 1 423 46 480 3.37e-108 328
MS.gene041216.t1 AT5G08250 39.773 440 243 8 1 423 108 542 1.67e-107 328
MS.gene041216.t1 AT5G23190 37.071 437 260 5 1 423 107 542 1.03e-104 321
MS.gene041216.t1 AT3G26125 40.492 447 230 11 6 423 95 534 2.39e-103 317
MS.gene041216.t1 AT1G63710 39.080 435 247 8 2 423 80 509 1.71e-102 314
MS.gene041216.t1 AT5G58860 38.318 428 252 5 4 422 85 509 1.53e-101 311
MS.gene041216.t1 AT1G24540 38.106 433 251 6 4 421 90 520 1.53e-100 309
MS.gene041216.t1 AT1G13140 38.584 438 243 10 6 423 95 526 4.69e-99 306
MS.gene041216.t1 AT2G45970 38.215 437 249 7 3 423 81 512 7.26e-99 305
MS.gene041216.t1 AT1G01600 38.356 438 250 7 3 423 81 515 1.43e-98 305
MS.gene041216.t1 AT4G00360 38.073 436 252 6 3 423 81 513 1.93e-98 305
MS.gene041216.t1 AT1G13150 39.269 438 240 10 6 423 88 519 3.14e-97 301
MS.gene041216.t1 AT1G13140 37.762 429 233 9 6 423 95 500 2.69e-96 298
MS.gene041216.t1 AT1G57750 40.616 357 193 3 2 349 78 424 5.80e-92 285
MS.gene041216.t1 AT2G27690 35.417 432 260 8 1 422 73 495 3.58e-85 269
MS.gene041216.t1 AT3G56630 36.927 436 251 12 1 422 74 499 5.35e-83 263
MS.gene041216.t1 AT1G69500 33.624 458 255 8 7 422 74 524 1.23e-81 260
MS.gene041216.t1 AT1G34540 36.239 436 251 13 2 422 75 498 6.53e-81 258
MS.gene041216.t1 AT3G48520 34.873 433 254 9 4 422 82 500 1.75e-80 257
MS.gene041216.t1 AT2G45510 35.321 436 258 11 4 422 81 509 9.46e-80 255
MS.gene041216.t1 AT2G44890 34.633 436 261 11 4 422 81 509 2.17e-79 254
MS.gene041216.t1 AT5G63450 35.104 433 252 11 4 421 84 502 2.71e-78 251
MS.gene041216.t1 AT5G63450 35.104 433 252 11 4 421 142 560 1.38e-77 251
MS.gene041216.t1 AT2G44890 33.875 431 253 10 4 422 81 491 5.79e-76 245
MS.gene041216.t1 AT3G01900 33.724 427 260 9 4 421 78 490 3.82e-73 238
MS.gene041216.t1 AT1G31800 27.169 438 284 15 2 422 151 570 9.49e-37 142
MS.gene041216.t1 AT3G53130 26.484 438 286 17 2 421 120 539 1.51e-32 129
MS.gene041216.t1 AT4G15110 24.895 474 283 17 4 422 124 579 3.24e-30 123
MS.gene041216.t1 AT2G26710 24.009 429 291 12 4 420 109 514 8.74e-24 103
MS.gene041216.t1 AT5G51900 40.152 132 64 1 143 259 3 134 4.98e-23 97.4
MS.gene041216.t1 AT5G52400 29.167 264 170 8 163 419 264 517 9.30e-22 97.8
MS.gene041216.t1 AT3G48300 26.074 326 226 9 94 416 164 477 2.98e-21 96.3
MS.gene041216.t1 AT3G48300 26.074 326 226 9 94 416 166 479 3.01e-21 96.3
MS.gene041216.t1 AT2G46950 23.326 433 288 13 4 419 163 568 3.06e-21 96.7
MS.gene041216.t1 AT4G13310 28.169 284 186 8 94 371 171 442 2.56e-19 90.5
MS.gene041216.t1 AT3G61040 27.830 212 146 5 180 390 255 460 7.28e-19 89.0
MS.gene041216.t1 AT2G27000 24.929 353 242 11 83 423 167 508 9.46e-19 89.0
MS.gene041216.t1 AT5G24910 25.564 266 173 8 169 421 279 532 9.94e-19 89.0
MS.gene041216.t1 AT5G24900 23.733 434 282 14 9 418 116 524 1.39e-18 88.2
MS.gene041216.t1 AT5G24900 23.666 431 280 14 12 418 2 407 1.58e-18 87.4
MS.gene041216.t1 AT1G64940 22.867 293 213 5 139 422 222 510 2.90e-18 87.4
MS.gene041216.t1 AT2G14100 27.027 296 198 10 102 391 189 472 2.93e-18 87.4
MS.gene041216.t1 AT4G13290 26.644 289 190 8 87 371 165 435 4.04e-18 86.7
MS.gene041216.t1 AT3G14680 23.502 434 287 15 4 420 106 511 6.82e-18 86.3
MS.gene041216.t1 AT3G14640 25.954 262 169 7 169 420 289 535 1.14e-17 85.5
MS.gene041216.t1 AT3G20140 25.649 308 212 9 83 386 170 464 1.19e-17 85.5
MS.gene041216.t1 AT3G14640 25.954 262 169 7 169 420 267 513 1.43e-17 85.1
MS.gene041216.t1 AT5G38450 29.348 184 111 4 241 419 345 514 3.48e-17 84.0
MS.gene041216.t1 AT3G25180 25.397 252 175 5 156 400 238 483 4.78e-17 83.6
MS.gene041216.t1 AT3G14660 26.556 241 164 5 184 420 134 365 6.25e-17 82.4
MS.gene041216.t1 AT2G27010 25.836 329 219 12 70 388 135 448 6.26e-17 83.2
MS.gene041216.t1 AT4G15350 27.160 243 161 8 190 423 269 504 6.28e-17 83.2
MS.gene041216.t1 AT4G37410 25.075 335 225 10 58 386 135 449 9.84e-17 82.4
MS.gene041216.t1 AT3G14690 27.076 277 155 9 177 420 249 511 1.12e-16 82.4
MS.gene041216.t1 AT3G14690 27.076 277 155 9 177 420 284 546 1.24e-16 82.4
MS.gene041216.t1 AT3G14660 26.556 241 164 5 184 420 280 511 1.39e-16 82.0
MS.gene041216.t1 AT4G27710 28.302 265 159 10 166 418 269 514 1.80e-16 81.6
MS.gene041216.t1 AT3G32047 26.688 311 203 11 90 391 176 470 2.05e-16 81.6
MS.gene041216.t1 AT1G64950 23.179 302 206 6 141 422 214 509 3.63e-16 80.9
MS.gene041216.t1 AT4G37340 23.729 295 189 8 93 375 170 440 3.90e-16 80.9
MS.gene041216.t1 AT5G06900 24.419 258 175 8 144 394 221 465 3.94e-16 80.9
MS.gene041216.t1 AT2G46960 21.296 432 302 12 4 419 106 515 4.85e-16 80.5
MS.gene041216.t1 AT3G14650 27.236 246 156 6 184 420 280 511 5.13e-16 80.5
MS.gene041216.t1 AT4G37400 25.225 333 227 10 58 386 135 449 5.32e-16 80.5
MS.gene041216.t1 AT3G14620 28.807 243 151 7 180 413 278 507 7.82e-16 79.7
MS.gene041216.t1 AT2G45580 26.496 234 156 7 162 390 96 318 8.04e-16 79.0
MS.gene041216.t1 AT4G13770 24.681 235 164 5 165 394 241 467 1.01e-15 79.3
MS.gene041216.t1 AT3G14630 25.468 267 176 7 163 420 255 507 1.04e-15 79.3
MS.gene041216.t1 AT3G20940 26.638 229 154 6 162 382 246 468 1.05e-15 79.3
MS.gene041216.t1 AT3G20110 26.087 299 204 9 83 377 167 452 1.07e-15 79.3
MS.gene041216.t1 AT3G14630 25.468 267 176 7 163 420 310 562 1.18e-15 79.3
MS.gene041216.t1 AT4G31950 24.335 263 176 10 150 400 231 482 1.48e-15 79.0
MS.gene041216.t1 AT2G45580 26.496 234 156 7 162 390 250 472 1.56e-15 79.0
MS.gene041216.t1 AT4G31940 24.206 252 175 6 160 400 248 494 1.70e-15 79.0
MS.gene041216.t1 AT1G67110 26.222 225 147 4 200 419 298 508 3.33e-15 77.8
MS.gene041216.t1 AT2G25160 27.365 296 190 10 89 369 173 458 5.19e-15 77.4
MS.gene041216.t1 AT1G50520 23.907 343 233 14 48 377 138 465 5.21e-15 77.4
MS.gene041216.t1 AT3G20120 25.980 204 139 5 180 377 128 325 5.53e-15 76.6
MS.gene041216.t1 AT3G20120 25.980 204 139 5 180 377 128 325 5.53e-15 76.6
MS.gene041216.t1 AT3G20120 25.980 204 139 5 180 377 128 325 5.53e-15 76.6
MS.gene041216.t1 AT3G20120 25.980 204 139 5 180 377 264 461 5.68e-15 77.0
MS.gene041216.t1 AT3G61880 23.585 212 151 6 180 387 288 492 6.36e-15 77.0
MS.gene041216.t1 AT3G61880 23.585 212 151 6 180 387 288 492 7.03e-15 77.0
MS.gene041216.t1 AT5G35715 27.586 232 152 6 162 387 176 397 8.25e-15 76.3
MS.gene041216.t1 AT1G01190 27.604 192 127 7 225 411 338 522 9.70e-15 76.6
MS.gene041216.t1 AT1G01190 27.604 192 127 7 225 411 333 517 9.97e-15 76.6
MS.gene041216.t1 AT3G14610 25.769 260 169 8 171 420 266 511 1.35e-14 75.9
MS.gene041216.t1 AT1G64930 25.991 227 159 6 201 422 288 510 1.88e-14 75.5
MS.gene041216.t1 AT2G46960 24.809 262 176 7 167 419 150 399 2.02e-14 75.1
MS.gene041216.t1 AT2G24180 23.741 278 189 8 147 414 227 491 2.83e-14 75.1
MS.gene041216.t1 AT5G10610 26.638 229 153 6 160 386 235 450 2.89e-14 75.1
MS.gene041216.t1 AT3G26270 25.417 240 163 6 160 392 240 470 3.23e-14 74.7
MS.gene041216.t1 AT3G48270 24.373 279 201 6 91 369 163 431 4.61e-14 74.3
MS.gene041216.t1 AT1G33730 23.247 271 190 6 121 391 84 336 5.07e-14 73.6
MS.gene041216.t1 AT1G33730 23.247 271 190 6 121 391 84 336 5.07e-14 73.6
MS.gene041216.t1 AT3G20935 29.070 172 111 5 221 388 134 298 5.57e-14 73.2
MS.gene041216.t1 AT2G45550 25.322 233 160 6 197 423 286 510 7.51e-14 73.6
MS.gene041216.t1 AT5G10600 23.684 342 224 11 102 419 176 504 8.67e-14 73.6
MS.gene041216.t1 AT2G12190 22.697 304 207 7 141 422 214 511 9.49e-14 73.6
MS.gene041216.t1 AT4G39950 25.000 244 172 6 160 397 307 545 9.65e-14 73.6
MS.gene041216.t1 AT4G39950 25.000 244 172 6 160 397 267 505 1.00e-13 73.6
MS.gene041216.t1 AT3G26830 23.629 237 162 6 160 387 232 458 1.03e-13 73.2
MS.gene041216.t1 AT2G46660 24.766 214 149 6 180 389 288 493 1.25e-13 73.2
MS.gene041216.t1 AT5G09970 27.143 210 141 6 169 376 289 488 2.03e-13 72.4
MS.gene041216.t1 AT2G45560 25.357 280 183 8 155 422 244 509 2.16e-13 72.4
MS.gene041216.t1 AT2G30770 27.624 181 126 3 219 399 293 468 4.51e-13 71.2
MS.gene041216.t1 AT2G45570 23.929 280 189 6 154 421 242 509 5.75e-13 70.9
MS.gene041216.t1 AT2G26170 26.984 252 169 8 178 421 194 438 6.71e-13 70.5
MS.gene041216.t1 AT5G06905 27.236 246 153 9 169 397 248 484 7.64e-13 70.5
MS.gene041216.t1 AT4G37330 28.704 216 116 7 169 375 251 437 8.11e-13 70.5
MS.gene041216.t1 AT2G26170 26.984 252 169 8 178 421 277 521 8.22e-13 70.5
MS.gene041216.t1 AT4G37310 23.263 331 211 12 85 396 162 468 8.23e-13 70.5
MS.gene041216.t1 AT1G13080 22.756 312 226 6 84 387 40 344 1.44e-12 69.3
MS.gene041216.t1 AT1G13080 23.203 306 220 6 90 387 164 462 1.96e-12 69.3
MS.gene041216.t1 AT3G48280 21.116 251 188 5 150 397 216 459 3.42e-12 68.6
MS.gene041216.t1 AT4G15360 26.442 208 142 6 174 377 259 459 3.53e-12 68.6
MS.gene041216.t1 AT2G23190 24.458 323 220 10 58 375 181 484 3.62e-12 68.6
MS.gene041216.t1 AT1G33720 24.286 210 147 5 220 423 200 403 4.73e-12 67.8
MS.gene041216.t1 AT3G48310 22.930 314 220 8 91 398 164 461 5.53e-12 67.8
MS.gene041216.t1 AT3G03470 23.737 198 146 2 203 396 285 481 6.34e-12 67.8
MS.gene041216.t1 AT3G28740 27.753 227 145 7 162 386 247 456 8.48e-12 67.4
MS.gene041216.t1 AT4G12310 25.221 226 151 8 170 389 264 477 1.12e-11 67.0
MS.gene041216.t1 AT3G26200 28.780 205 131 5 194 392 271 466 1.21e-11 66.6
MS.gene041216.t1 AT3G48290 24.068 295 182 8 91 369 165 433 1.64e-11 66.2
MS.gene041216.t1 AT3G26280 26.341 205 137 5 194 392 275 471 3.67e-11 65.5
MS.gene041216.t1 AT3G26280 26.341 205 137 5 194 392 292 488 4.01e-11 65.1
MS.gene041216.t1 AT3G20090 25.000 204 141 7 180 377 128 325 6.02e-11 64.3
MS.gene041216.t1 AT3G20090 25.000 204 141 7 180 377 266 463 7.04e-11 64.3
MS.gene041216.t1 AT3G26230 23.810 231 164 4 171 397 248 470 8.20e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTTGCATTTCTCTTT+TGG 0.141728 7.2:-65443606 None:intergenic
GCTCTCTCACATGCAATTTC+AGG 0.167970 7.2:-65443434 None:intergenic
AACAGAAACACTTGGGATTA+TGG 0.172616 7.2:-65444257 None:intergenic
TCGGAAGGGTGGAGGAAATA+TGG 0.227134 7.2:+65444035 MS.gene041216:CDS
GACATGTAAAACCAAGATTT+TGG 0.229523 7.2:+65443489 MS.gene041216:CDS
GAACAAAGTTGGAAAGATTT+AGG 0.232318 7.2:+65443845 MS.gene041216:CDS
TTCCAACTTTGTTCCCTTGA+TGG 0.257412 7.2:-65443836 None:intergenic
AGCACAAAATTCGAAAACTA+TGG 0.281400 7.2:+65443110 MS.gene041216:CDS
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7.2:+65444183 MS.gene041216:CDS
TTTGATCTCTTCAAGAATCT+TGG 0.314143 7.2:-65443804 None:intergenic
AGTGATGTGTTGCACGTTCA+TGG 0.342543 7.2:-65443087 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7.2:+65444150 MS.gene041216:CDS
TGCAGCTTCCACCAAAATCT+TGG 0.354262 7.2:-65443500 None:intergenic
ACAGAAACACTTGGGATTAT+GGG 0.358549 7.2:-65444256 None:intergenic
AAATTCATTGCTTTCAATGC+TGG 0.386232 7.2:+65444133 MS.gene041216:CDS
AGAATCTTGGCTTCAACAAA+AGG 0.387762 7.2:-65443791 None:intergenic
CGATTAGCTCGGGCCTTACT+TGG 0.388898 7.2:+65443744 MS.gene041216:CDS
AATGCAGATTTATGCTCTAA+AGG 0.389672 7.2:-65443941 None:intergenic
TTCTTAGAAATCCACCTCTC+TGG 0.395719 7.2:-65444082 None:intergenic
CGGAAGGGTGGAGGAAATAT+GGG 0.397563 7.2:+65444036 MS.gene041216:CDS
AGTTCAATAGAAAGACAATT+AGG 0.403320 7.2:-65443410 None:intergenic
TTTGGTGGAAGCTGCAGAAA+TGG 0.410841 7.2:+65443507 MS.gene041216:CDS
GAAAGCAATGAATTTGTAAG+AGG 0.414835 7.2:-65444125 None:intergenic
TGGAAAGATTTAGGAGCAAA+AGG 0.414918 7.2:+65443854 MS.gene041216:CDS
ATGTGCTTCCTAGTGGGCAT+AGG 0.416309 7.2:+65443972 MS.gene041216:CDS
AGCAAGTTAATTTATTTACA+TGG 0.435812 7.2:+65443881 MS.gene041216:CDS
TCCTTGGAGATGGAATATTT+AGG 0.444745 7.2:+65443165 MS.gene041216:CDS
AGCCTTGAGGCTTTATCCTC+CGG 0.446796 7.2:+65443916 MS.gene041216:CDS
GAGAGGTGGATTTCTAAGAA+AGG 0.468319 7.2:+65444085 MS.gene041216:CDS
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7.2:+65444151 MS.gene041216:CDS
TACCATCAAGGGAACAAAGT+TGG 0.470971 7.2:+65443834 MS.gene041216:CDS
CTCTCTCACATGCAATTTCA+GGG 0.473701 7.2:-65443433 None:intergenic
TCAAAGAAAATTTACCATCA+AGG 0.477949 7.2:+65443822 MS.gene041216:CDS
ACACATGAAACATGGCTTGA+AGG 0.478348 7.2:+65444285 MS.gene041216:CDS
GATTTATGCTCTAAAGGAAC+CGG 0.481253 7.2:-65443935 None:intergenic
GTGATGTGTTGCACGTTCAT+GGG 0.481553 7.2:-65443086 None:intergenic
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7.2:+65444156 MS.gene041216:CDS
TCAATCAATCTACTTGCAGC+TGG 0.507399 7.2:+65443713 MS.gene041216:CDS
TGTGCTTCCTAGTGGGCATA+GGG 0.508071 7.2:+65443973 MS.gene041216:CDS
TTGCACGTTCATGGGGTCAC+TGG 0.508498 7.2:-65443078 None:intergenic
AATATCATTATGAATGAAGC+AGG 0.509091 7.2:+65443647 MS.gene041216:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7.2:+65444051 MS.gene041216:CDS
GAATCTTGGCTTCAACAAAA+GGG 0.520382 7.2:-65443790 None:intergenic
CAAAGAAAATTTACCATCAA+GGG 0.523160 7.2:+65443823 MS.gene041216:CDS
AGAGGTGGATTTCTAAGAAA+GGG 0.524863 7.2:+65444086 MS.gene041216:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.527361 7.2:+65443855 MS.gene041216:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7.2:-65444157 None:intergenic
GCACAAAATTCGAAAACTAT+GGG 0.543693 7.2:+65443111 MS.gene041216:CDS
ATTATGAATGAAGCAGGAGA+TGG 0.551989 7.2:+65443653 MS.gene041216:CDS
TGGAAGAGATACGATTAGCT+CGG 0.552434 7.2:+65443733 MS.gene041216:CDS
ATACTCCGTCGGAAGGGTGG+AGG 0.557016 7.2:+65444027 MS.gene041216:CDS
CTGCAGAAATGGTTTCAAGT+TGG 0.558446 7.2:+65443518 MS.gene041216:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7.2:+65444020 MS.gene041216:CDS
GATTTAACCCTATGCCCACT+AGG 0.564899 7.2:-65443980 None:intergenic
GGAAGAGATACGATTAGCTC+GGG 0.565560 7.2:+65443734 MS.gene041216:CDS
TCTATACTCCGTCGGAAGGG+TGG 0.569109 7.2:+65444024 MS.gene041216:CDS
TATTTCCTCCACCCTTCCGA+CGG 0.573423 7.2:-65444032 None:intergenic
AGGTGGATTTCTAAGAAAGG+GGG 0.573622 7.2:+65444088 MS.gene041216:CDS
TACATAACATATATTGTCAA+AGG 0.575867 7.2:-65443372 None:intergenic
TTCTCTATACTCCGTCGGAA+GGG 0.579589 7.2:+65444021 MS.gene041216:CDS
AAAGCAATGAATTTGTAAGA+GGG 0.580193 7.2:-65444124 None:intergenic
TGTAAAACAACAGAAACACT+TGG 0.585278 7.2:-65444265 None:intergenic
TGGAATTTAAACCAGAGAGG+TGG 0.591655 7.2:+65444071 MS.gene041216:CDS
AAATTCGAAAACTATGGGAA+AGG 0.592062 7.2:+65443116 MS.gene041216:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7.2:+65443903 MS.gene041216:CDS
AAATCTGATGTGCTTCCTAG+TGG 0.599783 7.2:+65443965 MS.gene041216:CDS
ACCTAAATATTCCATCTCCA+AGG 0.604343 7.2:-65443166 None:intergenic
GAATTATCACATTCAAGTGG+TGG 0.608088 7.2:+65444225 MS.gene041216:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7.2:+65444222 MS.gene041216:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7.2:+65444016 MS.gene041216:CDS
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7.2:+65444140 MS.gene041216:CDS
GAGAGCATTTACTCAAGCAG+AGG 0.621127 7.2:+65443451 MS.gene041216:CDS
AATCTGATGTGCTTCCTAGT+GGG 0.627619 7.2:+65443966 MS.gene041216:CDS
GGTGGATTTCTAAGAAAGGG+GGG 0.630134 7.2:+65444089 MS.gene041216:CDS
TGATGTGTTGCACGTTCATG+GGG 0.633959 7.2:-65443085 None:intergenic
GGAAGGGTGGAGGAAATATG+GGG 0.642362 7.2:+65444037 MS.gene041216:CDS
GAGGTGGATTTCTAAGAAAG+GGG 0.649528 7.2:+65444087 MS.gene041216:CDS
AACCGGAGGATAAAGCCTCA+AGG 0.652895 7.2:-65443918 None:intergenic
GCTTGGAATTTAAACCAGAG+AGG 0.654033 7.2:+65444068 MS.gene041216:CDS
GTAAAACAACAGAAACACTT+GGG 0.655253 7.2:-65444264 None:intergenic
TTATGCTCTAAAGGAACCGG+AGG 0.659244 7.2:-65443932 None:intergenic
AAATCCAAAAGAGAAATGCA+AGG 0.660804 7.2:+65443602 MS.gene041216:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATGTTATGTAGTTTT+AGG + chr7.2:65443380-65443399 MS.gene041216:CDS 15.0%
!! AGCAAGTTAATTTATTTACA+TGG + chr7.2:65443881-65443900 MS.gene041216:CDS 20.0%
!! ATTGAGAAAAAACTATTTAG+TGG + chr7.2:65443275-65443294 MS.gene041216:CDS 20.0%
!! TACATAACATATATTGTCAA+AGG - chr7.2:65443375-65443394 None:intergenic 20.0%
!!! AATAGATGATGATTTTTTGA+GGG + chr7.2:65443685-65443704 MS.gene041216:CDS 20.0%
!!! ACTAAATAGTTTTTTCTCAA+TGG - chr7.2:65443276-65443295 None:intergenic 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG + chr7.2:65443345-65443364 MS.gene041216:CDS 20.0%
! AAAGCAATGAATTTGTAAGA+GGG - chr7.2:65444127-65444146 None:intergenic 25.0%
! AATATCATTATGAATGAAGC+AGG + chr7.2:65443647-65443666 MS.gene041216:CDS 25.0%
! AGTTCAATAGAAAGACAATT+AGG - chr7.2:65443413-65443432 None:intergenic 25.0%
! CAAAGAAAATTTACCATCAA+GGG + chr7.2:65443823-65443842 MS.gene041216:CDS 25.0%
! CTCAAAAAATCATCATCTAT+TGG - chr7.2:65443686-65443705 None:intergenic 25.0%
! TCAAAGAAAATTTACCATCA+AGG + chr7.2:65443822-65443841 MS.gene041216:CDS 25.0%
! TTGATCATGCTTGTAAAAAA+GGG + chr7.2:65443312-65443331 MS.gene041216:CDS 25.0%
!!! CAATAGATGATGATTTTTTG+AGG + chr7.2:65443684-65443703 MS.gene041216:CDS 25.0%
!!! TTCTCTTTTGGATTTGATTT+CGG - chr7.2:65443597-65443616 None:intergenic 25.0%
AAATCCAAAAGAGAAATGCA+AGG + chr7.2:65443602-65443621 MS.gene041216:CDS 30.0%
AAATTCATTGCTTTCAATGC+TGG + chr7.2:65444133-65444152 MS.gene041216:CDS 30.0%
AAATTCGAAAACTATGGGAA+AGG + chr7.2:65443116-65443135 MS.gene041216:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG + chr7.2:65444183-65444202 MS.gene041216:CDS 30.0%
AATGCAGATTTATGCTCTAA+AGG - chr7.2:65443944-65443963 None:intergenic 30.0%
AGCACAAAATTCGAAAACTA+TGG + chr7.2:65443110-65443129 MS.gene041216:CDS 30.0%
CTTGATCATGCTTGTAAAAA+AGG + chr7.2:65443311-65443330 MS.gene041216:CDS 30.0%
GAAAGCAATGAATTTGTAAG+AGG - chr7.2:65444128-65444147 None:intergenic 30.0%
GAACAAAGTTGGAAAGATTT+AGG + chr7.2:65443845-65443864 MS.gene041216:CDS 30.0%
GCACAAAATTCGAAAACTAT+GGG + chr7.2:65443111-65443130 MS.gene041216:CDS 30.0%
GTAAAACAACAGAAACACTT+GGG - chr7.2:65444267-65444286 None:intergenic 30.0%
GTTGAATTATCACATTCAAG+TGG + chr7.2:65444222-65444241 MS.gene041216:CDS 30.0%
TGTAAAACAACAGAAACACT+TGG - chr7.2:65444268-65444287 None:intergenic 30.0%
TTTGATCTCTTCAAGAATCT+TGG - chr7.2:65443807-65443826 None:intergenic 30.0%
! ATGTAAAACCAAGATTTTGG+TGG + chr7.2:65443492-65443511 MS.gene041216:CDS 30.0%
! GACATGTAAAACCAAGATTT+TGG + chr7.2:65443489-65443508 MS.gene041216:CDS 30.0%
! TTAGGTCTGATTTTCACATT+TGG + chr7.2:65443183-65443202 MS.gene041216:CDS 30.0%
!! ACTTCATTCAATTTTCAAGC+AGG + chr7.2:65443223-65443242 MS.gene041216:CDS 30.0%
!! GTTGTTTTACACATGAAACA+TGG + chr7.2:65444277-65444296 MS.gene041216:CDS 30.0%
!!! AGTGAGATTTTTGAAATCCT+TGG + chr7.2:65443149-65443168 MS.gene041216:CDS 30.0%
!!! ATTTTTGAAATCCTTGGAGA+TGG + chr7.2:65443155-65443174 MS.gene041216:CDS 30.0%
AACAGAAACACTTGGGATTA+TGG - chr7.2:65444260-65444279 None:intergenic 35.0%
ACAGAAACACTTGGGATTAT+GGG - chr7.2:65444259-65444278 None:intergenic 35.0%
ACCTAAATATTCCATCTCCA+AGG - chr7.2:65443169-65443188 None:intergenic 35.0%
AGAATCTTGGCTTCAACAAA+AGG - chr7.2:65443794-65443813 None:intergenic 35.0%
ATTATGAATGAAGCAGGAGA+TGG + chr7.2:65443653-65443672 MS.gene041216:CDS 35.0%
GAATCTTGGCTTCAACAAAA+GGG - chr7.2:65443793-65443812 None:intergenic 35.0%
GAATTATCACATTCAAGTGG+TGG + chr7.2:65444225-65444244 MS.gene041216:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG + chr7.2:65443855-65443874 MS.gene041216:CDS 35.0%
TCCTTGGAGATGGAATATTT+AGG + chr7.2:65443165-65443184 MS.gene041216:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG + chr7.2:65443854-65443873 MS.gene041216:CDS 35.0%
TTGTAAAAAAGGGATGCAAG+TGG + chr7.2:65443322-65443341 MS.gene041216:CDS 35.0%
! AGAGGTGGATTTCTAAGAAA+GGG + chr7.2:65444086-65444105 MS.gene041216:CDS 35.0%
! TTCTCCTTGCATTTCTCTTT+TGG - chr7.2:65443609-65443628 None:intergenic 35.0%
! TTTCAAGCAGGAAAGTTTTC+AGG + chr7.2:65443235-65443254 MS.gene041216:CDS 35.0%
!! GATTTATGCTCTAAAGGAAC+CGG - chr7.2:65443938-65443957 None:intergenic 35.0%
AAATCTGATGTGCTTCCTAG+TGG + chr7.2:65443965-65443984 MS.gene041216:CDS 40.0%
AATATGGGGAGAAGATTGCT+TGG + chr7.2:65444051-65444070 MS.gene041216:CDS 40.0%
AATCTGATGTGCTTCCTAGT+GGG + chr7.2:65443966-65443985 MS.gene041216:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG + chr7.2:65444285-65444304 MS.gene041216:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG - chr7.2:65443760-65443779 None:intergenic 40.0%
CTCTCTCACATGCAATTTCA+GGG - chr7.2:65443436-65443455 None:intergenic 40.0%
GCTTGGAATTTAAACCAGAG+AGG + chr7.2:65444068-65444087 MS.gene041216:CDS 40.0%
GTGTATTCTCTATACTCCGT+CGG + chr7.2:65444016-65444035 MS.gene041216:CDS 40.0%
TACCATCAAGGGAACAAAGT+TGG + chr7.2:65443834-65443853 MS.gene041216:CDS 40.0%
TCAATCAATCTACTTGCAGC+TGG + chr7.2:65443713-65443732 MS.gene041216:CDS 40.0%
TGGAATTTAAACCAGAGAGG+TGG + chr7.2:65444071-65444090 MS.gene041216:CDS 40.0%
TTCCAACTTTGTTCCCTTGA+TGG - chr7.2:65443839-65443858 None:intergenic 40.0%
TTCTTAGAAATCCACCTCTC+TGG - chr7.2:65444085-65444104 None:intergenic 40.0%
! AGGTGGATTTCTAAGAAAGG+GGG + chr7.2:65444088-65444107 MS.gene041216:CDS 40.0%
! CTGCAGAAATGGTTTCAAGT+TGG + chr7.2:65443518-65443537 MS.gene041216:CDS 40.0%
! GAGAGGTGGATTTCTAAGAA+AGG + chr7.2:65444085-65444104 MS.gene041216:CDS 40.0%
! GAGGTGGATTTCTAAGAAAG+GGG + chr7.2:65444087-65444106 MS.gene041216:CDS 40.0%
! TGGAAGAGATACGATTAGCT+CGG + chr7.2:65443733-65443752 MS.gene041216:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG + chr7.2:65443757-65443776 MS.gene041216:CDS 40.0%
!!! TACTTGGTTTTTCTGGTTGG+TGG + chr7.2:65443760-65443779 MS.gene041216:CDS 40.0%
ACCAAGGAGTTGTTTGGGTA+AGG + chr7.2:65444156-65444175 MS.gene041216:CDS 45.0%
AGTGATGTGTTGCACGTTCA+TGG - chr7.2:65443090-65443109 None:intergenic 45.0%
ATTCTCTATACTCCGTCGGA+AGG + chr7.2:65444020-65444039 MS.gene041216:CDS 45.0%
GATTTAACCCTATGCCCACT+AGG - chr7.2:65443983-65444002 None:intergenic 45.0%
GCTCTCTCACATGCAATTTC+AGG - chr7.2:65443437-65443456 None:intergenic 45.0%
GTGATGTGTTGCACGTTCAT+GGG - chr7.2:65443089-65443108 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG - chr7.2:65444160-65444179 None:intergenic 45.0%
TGATGTGTTGCACGTTCATG+GGG - chr7.2:65443088-65443107 None:intergenic 45.0%
TGCAGCTTCCACCAAAATCT+TGG - chr7.2:65443503-65443522 None:intergenic 45.0%
TTCTCTATACTCCGTCGGAA+GGG + chr7.2:65444021-65444040 MS.gene041216:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG + chr7.2:65444140-65444159 MS.gene041216:CDS 45.0%
TTTGGTGGAAGCTGCAGAAA+TGG + chr7.2:65443507-65443526 MS.gene041216:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG + chr7.2:65443903-65443922 MS.gene041216:CDS 45.0%
! GGAAGAGATACGATTAGCTC+GGG + chr7.2:65443734-65443753 MS.gene041216:CDS 45.0%
! GGTGGATTTCTAAGAAAGGG+GGG + chr7.2:65444089-65444108 MS.gene041216:CDS 45.0%
!! GAGAGCATTTACTCAAGCAG+AGG + chr7.2:65443451-65443470 MS.gene041216:CDS 45.0%
!! TTATGCTCTAAAGGAACCGG+AGG - chr7.2:65443935-65443954 None:intergenic 45.0%
AACCGGAGGATAAAGCCTCA+AGG - chr7.2:65443921-65443940 None:intergenic 50.0%
CGGAAGGGTGGAGGAAATAT+GGG + chr7.2:65444036-65444055 MS.gene041216:CDS 50.0%
GCTGGACCAAGGAGTTGTTT+GGG + chr7.2:65444151-65444170 MS.gene041216:CDS 50.0%
GGAAGGGTGGAGGAAATATG+GGG + chr7.2:65444037-65444056 MS.gene041216:CDS 50.0%
TATTTCCTCCACCCTTCCGA+CGG - chr7.2:65444035-65444054 None:intergenic 50.0%
TCGGAAGGGTGGAGGAAATA+TGG + chr7.2:65444035-65444054 MS.gene041216:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG + chr7.2:65444150-65444169 MS.gene041216:CDS 50.0%
! AGCCTTGAGGCTTTATCCTC+CGG + chr7.2:65443916-65443935 MS.gene041216:CDS 50.0%
! ATGTGCTTCCTAGTGGGCAT+AGG + chr7.2:65443972-65443991 MS.gene041216:CDS 50.0%
! TGTGCTTCCTAGTGGGCATA+GGG + chr7.2:65443973-65443992 MS.gene041216:CDS 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG + chr7.2:65443753-65443772 MS.gene041216:CDS 50.0%
TCTATACTCCGTCGGAAGGG+TGG + chr7.2:65444024-65444043 MS.gene041216:CDS 55.0%
TTGCACGTTCATGGGGTCAC+TGG - chr7.2:65443081-65443100 None:intergenic 55.0%
! CGATTAGCTCGGGCCTTACT+TGG + chr7.2:65443744-65443763 MS.gene041216:CDS 55.0%
ATACTCCGTCGGAAGGGTGG+AGG + chr7.2:65444027-65444046 MS.gene041216:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 65443062 65444333 65443062 ID=MS.gene041216
chr7.2 mRNA 65443062 65444333 65443062 ID=MS.gene041216.t1;Parent=MS.gene041216
chr7.2 exon 65443062 65444333 65443062 ID=MS.gene041216.t1.exon1;Parent=MS.gene041216.t1
chr7.2 CDS 65443062 65444333 65443062 ID=cds.MS.gene041216.t1;Parent=MS.gene041216.t1
Gene Sequence

>MS.gene041216

ATGAACATTGTTTGCACCAGTGACCCCATGAACGTGCAACACATCACTAGCACAAAATTCGAAAACTATGGGAAAGGAAACGATTTCAGTGAGATTTTTGAAATCCTTGGAGATGGAATATTTAGGTCTGATTTTCACATTTGGAAGTACAACAGAACACTACTTCATTCAATTTTCAAGCAGGAAAGTTTTCAGGTATTTATTCACAAAACCATTGAGAAAAAACTATTTAGTGGTCTTCTTGTATTTCTTGATCATGCTTGTAAAAAAGGGATGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAATATATGTTATGTAGTTTTAGGATTTGATCCTAATTGTCTTTCTATTGAACTCCCTGAAATTGCATGTGAGAGAGCATTTACTCAAGCAGAGGACACATTGTTTTCTAGACATGTAAAACCAAGATTTTGGTGGAAGCTGCAGAAATGGTTTCAAGTTGGTGAAGAGAAACAGTTTATAAAGAATCAGAAAATTATTGATGAAATGCTGTATTCCGAAATCAAATCCAAAAGAGAAATGCAAGGAGAACAAAAAGTTGACTTGCTAAATATCATTATGAATGAAGCAGGAGATGGAGAAAATCCAATAGATGATGATTTTTTGAGGGATACATCAATCAATCTACTTGCAGCTGGAAGAGATACGATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTGGCAACACACCCTTTTGTTGAAGCCAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGGGAACAAAGTTGGAAAGATTTAGGAGCAAAAGGGCTTAGCAAGTTAATTTATTTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCTCCGGTTCCTTTAGAGCATAAATCTGCATTAAAATCTGATGTGCTTCCTAGTGGGCATAGGGTTAAATCAAATACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAGAGGTGGATTTCTAAGAAAGGGGGGATAATTCATGTTCCCTCTTACAAATTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTGTTTCTGTTGTTTTACACATGAAACATGGCTTGAAGGTTTATGTCAAAAAAAGAAGCATTTAA

Protein sequence

>MS.gene041216.t1

MNIVCTSDPMNVQHITSTKFENYGKGNDFSEIFEILGDGIFRSDFHIWKYNRTLLHSIFKQESFQVFIHKTIEKKLFSGLLVFLDHACKKGMQVDLQDIFQRLTFDNICYVVLGFDPNCLSIELPEIACERAFTQAEDTLFSRHVKPRFWWKLQKWFQVGEEKQFIKNQKIIDEMLYSEIKSKREMQGEQKVDLLNIIMNEAGDGENPIDDDFLRDTSINLLAAGRDTISSGLTWFFWLVATHPFVEAKILEEIKENLPSREQSWKDLGAKGLSKLIYLHGALCEALRLYPPVPLEHKSALKSDVLPSGHRVKSNTMIVYSLYSVGRVEEIWGEDCLEFKPERWISKKGGIIHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSVSVVLHMKHGLKVYVKKRSI