AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067184


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067184.t1 MTR_1g035750 95.464 507 23 0 1 507 1 507 0.0 1014
MS.gene067184.t1 MTR_1g035670 65.354 508 171 3 1 507 1 504 0.0 681
MS.gene067184.t1 MTR_1g036130 63.405 511 180 4 1 507 1 508 0.0 681
MS.gene067184.t1 MTR_1g035760 63.386 508 158 4 1 507 1 481 0.0 655
MS.gene067184.t1 MTR_1g035790 62.353 510 183 5 1 507 1 504 0.0 654
MS.gene067184.t1 MTR_1g050362 62.672 509 183 6 3 506 1 507 0.0 652
MS.gene067184.t1 MTR_1g036200 61.690 509 183 6 3 507 1 501 0.0 644
MS.gene067184.t1 MTR_1g035580 61.644 511 179 6 1 507 1 498 0.0 639
MS.gene067184.t1 MTR_1g036010 59.804 510 201 4 1 507 1 509 0.0 638
MS.gene067184.t1 MTR_1g035830 60.588 510 197 4 1 507 1 509 0.0 637
MS.gene067184.t1 MTR_1g035940 59.608 510 202 4 1 507 1 509 0.0 627
MS.gene067184.t1 MTR_1g036270 60.194 515 195 9 1 507 1 513 0.0 623
MS.gene067184.t1 MTR_1g035800 61.014 513 191 6 1 505 1 512 0.0 616
MS.gene067184.t1 MTR_1g035860 62.870 439 158 3 10 447 16 450 0.0 569
MS.gene067184.t1 MTR_1g069715 63.971 408 143 4 83 487 1 407 0.0 548
MS.gene067184.t1 MTR_7g033580 52.849 509 225 3 1 507 1 496 0.0 533
MS.gene067184.t1 MTR_7g033570 50.888 507 238 4 1 507 1 496 0.0 529
MS.gene067184.t1 MTR_8g088470 52.410 498 221 4 11 505 7 491 0.0 526
MS.gene067184.t1 MTR_6g004600 48.431 510 247 6 9 507 13 517 1.62e-172 496
MS.gene067184.t1 MTR_6g004590 48.141 511 246 6 11 507 12 517 6.98e-170 489
MS.gene067184.t1 MTR_6g004630 48.819 508 243 6 9 507 6 505 7.28e-170 489
MS.gene067184.t1 MTR_6g004670 48.419 506 248 6 4 505 9 505 4.56e-166 479
MS.gene067184.t1 MTR_6g004610 49.573 468 229 4 38 504 1 462 4.64e-158 458
MS.gene067184.t1 MTR_1g037560 39.718 496 285 5 20 506 54 544 3.89e-128 384
MS.gene067184.t1 MTR_4g075110 38.160 511 301 7 4 505 45 549 4.44e-124 374
MS.gene067184.t1 MTR_1g037550 38.446 502 287 7 20 506 54 548 8.49e-122 368
MS.gene067184.t1 MTR_8g098435 38.367 490 268 10 33 505 33 505 1.06e-99 310
MS.gene067184.t1 MTR_8g030590 34.667 525 302 13 1 505 7 510 4.81e-97 304
MS.gene067184.t1 MTR_3g463060 37.475 491 264 12 34 507 40 504 4.52e-96 300
MS.gene067184.t1 MTR_4g012320 60.274 219 87 0 289 507 7 225 2.66e-93 283
MS.gene067184.t1 MTR_5g070010 34.714 507 300 9 15 505 17 508 5.06e-93 292
MS.gene067184.t1 MTR_7g088330 34.059 505 306 9 13 505 19 508 1.88e-88 280
MS.gene067184.t1 MTR_7g096340 34.152 448 254 12 74 506 82 503 6.44e-83 266
MS.gene067184.t1 MTR_1g070345 33.268 511 303 14 13 506 16 505 8.53e-83 266
MS.gene067184.t1 MTR_7g029275 32.742 507 309 13 13 505 20 508 4.13e-80 259
MS.gene067184.t1 MTR_3g080580 34.483 493 289 15 31 505 41 517 1.73e-79 258
MS.gene067184.t1 MTR_1g070365 33.061 490 299 11 25 505 35 504 3.17e-79 256
MS.gene067184.t1 MTR_7g096320 33.784 444 261 12 74 506 83 504 3.34e-77 251
MS.gene067184.t1 MTR_4g119660 30.344 524 317 10 13 506 11 516 2.05e-74 244
MS.gene067184.t1 MTR_5g019140 30.153 524 318 10 13 506 26 531 6.73e-74 243
MS.gene067184.t1 MTR_8g035810 32.364 516 311 18 7 505 16 510 7.72e-74 243
MS.gene067184.t1 MTR_4g054920 34.467 441 258 12 79 505 93 516 1.72e-73 242
MS.gene067184.t1 MTR_1g060550 34.163 442 258 14 76 505 92 512 1.28e-71 237
MS.gene067184.t1 MTR_8g035860 31.384 513 319 16 7 505 16 509 9.31e-71 234
MS.gene067184.t1 MTR_8g035820 32.787 488 292 15 34 505 42 509 2.93e-70 233
MS.gene067184.t1 MTR_2g086040 33.875 431 259 12 79 505 90 498 3.60e-70 233
MS.gene067184.t1 MTR_8g035780 32.854 487 295 14 34 506 43 511 2.39e-69 231
MS.gene067184.t1 MTR_7g406990 36.490 359 211 7 30 380 47 396 1.73e-68 226
MS.gene067184.t1 MTR_1g102220 29.583 480 314 10 34 505 43 506 2.44e-67 225
MS.gene067184.t1 MTR_8g035760 29.645 479 314 12 34 505 49 511 6.08e-65 219
MS.gene067184.t1 MTR_8g035680 28.690 481 317 12 34 505 49 512 7.00e-63 214
MS.gene067184.t1 MTR_6g084040 54.595 185 65 2 1 184 1 167 8.09e-62 200
MS.gene067184.t1 MTR_8g035810 31.659 458 276 17 7 448 16 452 6.38e-60 204
MS.gene067184.t1 MTR_8g035680 34.859 284 174 5 228 505 87 365 1.23e-50 177
MS.gene067184.t1 MTR_1g102210 31.208 298 169 7 215 505 93 361 3.47e-40 149
MS.gene067184.t1 MTR_8g035810 29.563 389 238 16 7 379 16 384 1.67e-39 148
MS.gene067184.t1 MTR_1g070370 32.296 257 154 5 168 423 5 242 7.65e-37 136
MS.gene067184.t1 MTR_1g040110 58.929 112 45 1 125 236 57 167 1.87e-36 133
MS.gene067184.t1 MTR_1g050590 56.303 119 49 1 250 368 3 118 5.69e-35 127
MS.gene067184.t1 MTR_7g079440 27.527 465 295 18 52 505 215 648 2.76e-32 131
MS.gene067184.t1 MTR_5g009110 23.359 518 330 17 36 506 74 571 2.65e-27 115
MS.gene067184.t1 MTR_1g062190 24.485 437 303 14 77 505 122 539 5.38e-27 114
MS.gene067184.t1 MTR_1g036140 54.639 97 41 1 252 348 69 162 2.74e-24 99.8
MS.gene067184.t1 MTR_1g036140 42.636 129 61 4 1 116 1 129 1.03e-23 98.2
MS.gene067184.t1 MTR_7g006900 23.618 398 264 11 110 500 103 467 7.58e-24 104
MS.gene067184.t1 MTR_7g079440 28.238 386 237 16 52 428 215 569 1.09e-23 105
MS.gene067184.t1 MTR_6g017325 24.112 394 267 9 110 500 138 502 2.14e-23 103
MS.gene067184.t1 MTR_3g093530 23.887 494 326 16 32 504 59 523 4.68e-23 102
MS.gene067184.t1 MTR_5g009110 23.409 440 278 14 109 506 1 423 4.60e-22 99.0
MS.gene067184.t1 MTR_8g035790 47.475 99 50 2 409 506 1 98 3.91e-21 88.6
MS.gene067184.t1 MTR_8g098565 27.473 273 189 5 239 505 237 506 4.26e-21 96.7
MS.gene067184.t1 MTR_2g010250 28.309 272 187 6 239 505 237 505 3.40e-20 94.0
MS.gene067184.t1 MTR_8g046580 40.351 114 67 1 380 493 193 305 6.59e-20 90.9
MS.gene067184.t1 MTR_1g085680 24.229 454 280 13 70 500 99 511 1.28e-19 92.4
MS.gene067184.t1 MTR_4g071710 27.099 262 168 9 237 481 229 484 2.08e-19 91.7
MS.gene067184.t1 MTR_4g113650 23.362 458 301 12 58 500 92 514 3.79e-19 90.9
MS.gene067184.t1 MTR_2g010380 27.574 272 189 6 239 505 241 509 4.04e-19 90.5
MS.gene067184.t1 MTR_2g010290 30.317 221 147 5 290 505 314 532 4.30e-19 90.5
MS.gene067184.t1 MTR_5g009110 23.936 376 250 11 36 393 74 431 7.48e-19 89.7
MS.gene067184.t1 MTR_1g015860 23.201 556 332 21 2 506 18 529 8.09e-19 89.7
MS.gene067184.t1 MTR_0025s0110 21.351 459 311 15 58 502 101 523 1.98e-18 88.6
MS.gene067184.t1 MTR_2g010280 29.412 221 149 5 290 505 285 503 2.23e-18 88.2
MS.gene067184.t1 MTR_3g104560 29.496 278 165 8 241 506 144 402 2.35e-18 87.4
MS.gene067184.t1 MTR_2g010320 26.644 289 201 7 222 505 221 503 2.42e-18 88.2
MS.gene067184.t1 MTR_6g008500 21.748 515 326 19 9 476 17 501 2.75e-18 88.2
MS.gene067184.t1 MTR_3g104560 23.529 544 329 18 14 506 30 537 3.50e-18 87.8
MS.gene067184.t1 MTR_0147s0030 25.954 262 172 6 258 504 276 530 4.37e-18 87.4
MS.gene067184.t1 MTR_2g062670 31.000 200 104 6 148 338 49 223 7.38e-18 86.7
MS.gene067184.t1 MTR_8g008530 26.996 263 160 7 258 504 272 518 7.45e-18 86.7
MS.gene067184.t1 MTR_8g042000 24.561 456 272 19 70 498 107 517 8.66e-18 86.7
MS.gene067184.t1 MTR_7g012860 24.768 323 211 10 168 481 172 471 9.58e-18 86.3
MS.gene067184.t1 MTR_0287s0060 24.768 323 211 10 168 481 172 471 9.58e-18 86.3
MS.gene067184.t1 MTR_4g088420 31.250 192 126 4 294 484 20 206 1.24e-17 82.8
MS.gene067184.t1 MTR_1g101050 25.000 264 188 6 241 502 253 508 1.36e-17 85.9
MS.gene067184.t1 MTR_2g010330 27.350 234 165 4 276 505 275 507 1.42e-17 85.9
MS.gene067184.t1 MTR_2g023680 22.687 454 295 16 70 504 101 517 1.57e-17 85.9
MS.gene067184.t1 MTR_6g072490 25.758 264 186 7 241 502 255 510 1.71e-17 85.5
MS.gene067184.t1 MTR_2g072400 22.993 461 286 16 70 504 98 515 1.91e-17 85.5
MS.gene067184.t1 MTR_1g101040 26.136 264 185 6 241 502 257 512 2.12e-17 85.5
MS.gene067184.t1 MTR_6g008530 26.295 251 162 6 237 476 257 495 2.24e-17 85.5
MS.gene067184.t1 MTR_0171s0020 25.740 338 223 13 146 474 154 472 2.46e-17 85.1
MS.gene067184.t1 MTR_1g022040 21.578 431 311 9 70 500 95 498 2.90e-17 84.7
MS.gene067184.t1 MTR_7g012330 23.765 324 211 11 168 481 173 470 3.72e-17 84.7
MS.gene067184.t1 MTR_0181s0030 23.109 476 332 16 10 474 14 466 4.83e-17 84.3
MS.gene067184.t1 MTR_3g014880 26.966 267 167 8 232 484 248 500 5.22e-17 84.3
MS.gene067184.t1 MTR_2g072270 20.971 453 295 15 70 500 107 518 5.71e-17 84.0
MS.gene067184.t1 MTR_8g012585 28.016 257 155 7 230 484 198 426 6.61e-17 83.6
MS.gene067184.t1 MTR_8g076290 24.286 350 224 12 121 455 127 450 7.50e-17 83.6
MS.gene067184.t1 MTR_6g008430 26.119 268 185 9 232 496 245 502 9.86e-17 83.2
MS.gene067184.t1 MTR_4g088400 27.451 255 173 7 232 484 250 494 1.04e-16 83.2
MS.gene067184.t1 MTR_7g098550 22.889 450 299 14 60 500 90 500 1.07e-16 83.2
MS.gene067184.t1 MTR_8g012590 25.240 313 220 10 200 505 193 498 1.24e-16 82.8
MS.gene067184.t1 MTR_6g008620 27.826 230 148 9 232 453 249 468 1.70e-16 82.8
MS.gene067184.t1 MTR_8g042060 25.275 273 175 8 243 500 225 483 1.78e-16 82.4
MS.gene067184.t1 MTR_2g010300 27.602 221 141 5 290 506 285 490 1.86e-16 82.4
MS.gene067184.t1 MTR_7g098550 22.889 450 291 14 60 500 90 492 2.02e-16 82.4
MS.gene067184.t1 MTR_8g042060 25.275 273 175 8 243 500 261 519 2.44e-16 82.0
MS.gene067184.t1 MTR_8g042020 27.178 287 174 10 234 504 255 522 4.15e-16 81.3
MS.gene067184.t1 MTR_6g008640 25.379 264 173 7 232 484 247 497 8.12e-16 80.5
MS.gene067184.t1 MTR_2g062680 33.121 157 72 4 277 432 14 138 8.49e-16 76.3
MS.gene067184.t1 MTR_1g091003 24.593 492 312 21 1 474 9 459 9.83e-16 80.1
MS.gene067184.t1 MTR_4g088425 28.125 256 171 7 232 484 233 478 1.21e-15 79.7
MS.gene067184.t1 MTR_5g095290 25.460 326 201 11 167 481 177 471 1.42e-15 79.7
MS.gene067184.t1 MTR_8g104030 26.016 246 165 7 237 474 8 244 1.47e-15 77.4
MS.gene067184.t1 MTR_7g055793 26.070 257 167 6 258 504 225 468 2.61e-15 78.6
MS.gene067184.t1 MTR_7g055793 26.070 257 167 6 258 504 280 523 2.70e-15 79.0
MS.gene067184.t1 MTR_8g104100 29.508 183 115 6 298 474 55 229 3.67e-15 75.9
MS.gene067184.t1 MTR_5g034900 28.079 203 141 4 306 505 317 517 4.11e-15 78.2
MS.gene067184.t1 MTR_4g031820 23.789 454 278 17 70 498 111 521 4.14e-15 78.2
MS.gene067184.t1 MTR_5g073250 25.430 291 186 9 229 505 228 501 4.74e-15 78.2
MS.gene067184.t1 MTR_2g072340 21.414 481 306 17 50 504 81 515 4.99e-15 77.8
MS.gene067184.t1 MTR_5g021390 24.427 262 166 7 237 481 238 484 6.70e-15 77.4
MS.gene067184.t1 MTR_7g103450 26.042 288 188 9 222 504 239 506 8.22e-15 77.4
MS.gene067184.t1 MTR_4g088405 32.308 195 126 5 291 484 219 408 8.74e-15 77.0
MS.gene067184.t1 MTR_7g075610 28.638 213 130 7 279 481 274 474 1.58e-14 76.3
MS.gene067184.t1 MTR_5g094550 26.190 294 191 8 222 505 223 500 1.74e-14 76.3
MS.gene067184.t1 MTR_5g094570 25.212 353 224 14 167 505 175 501 2.12e-14 75.9
MS.gene067184.t1 MTR_1g035660 36.434 129 61 5 161 287 22 131 2.58e-14 70.5
MS.gene067184.t1 MTR_5g095230 21.861 462 322 15 52 504 82 513 2.84e-14 75.5
MS.gene067184.t1 MTR_4g104610 22.192 365 254 13 121 474 120 465 2.85e-14 75.5
MS.gene067184.t1 MTR_8g036185 25.152 330 210 11 165 474 170 482 3.48e-14 75.5
MS.gene067184.t1 MTR_6g042610 24.514 257 186 7 232 484 241 493 4.63e-14 75.1
MS.gene067184.t1 MTR_6g022450 25.984 254 180 5 255 505 261 509 4.78e-14 74.7
MS.gene067184.t1 MTR_2g055430 20.575 452 307 13 70 504 101 517 7.38e-14 74.3
MS.gene067184.t1 MTR_5g009110 24.161 298 198 8 109 393 1 283 8.20e-14 72.8
MS.gene067184.t1 MTR_2g061750 27.419 186 118 5 75 247 13 194 9.24e-14 70.5
MS.gene067184.t1 MTR_2g061740 27.419 186 118 5 75 247 13 194 9.59e-14 70.5
MS.gene067184.t1 MTR_5g070690 25.632 277 175 9 237 500 231 489 1.14e-13 73.6
MS.gene067184.t1 MTR_5g070800 25.632 277 175 9 237 500 231 489 1.14e-13 73.6
MS.gene067184.t1 MTR_8g469360 24.566 346 231 10 163 504 104 423 1.31e-13 73.2
MS.gene067184.t1 MTR_6g004570 40.909 110 53 4 245 343 4 112 1.56e-13 70.9
MS.gene067184.t1 MTR_1g035140 26.744 258 170 8 232 481 225 471 1.85e-13 73.2
MS.gene067184.t1 MTR_5g095260 24.339 378 230 13 121 481 134 472 2.91e-13 72.4
MS.gene067184.t1 MTR_5g018500 26.543 162 112 5 317 476 4 160 2.99e-13 68.9
MS.gene067184.t1 MTR_1g069200 18.884 466 342 15 44 502 73 509 3.22e-13 72.4
MS.gene067184.t1 MTR_4g031820 34.194 155 78 7 355 498 358 499 3.38e-13 72.0
MS.gene067184.t1 MTR_4g104660 22.532 466 310 16 29 480 55 483 3.94e-13 72.0
MS.gene067184.t1 MTR_5g070920 23.194 263 183 5 233 486 225 477 4.10e-13 72.0
MS.gene067184.t1 MTR_2g061200 24.034 233 158 5 282 504 305 528 4.72e-13 72.0
MS.gene067184.t1 MTR_2g072380 27.132 258 155 8 265 504 108 350 6.37e-13 70.5
MS.gene067184.t1 MTR_2g072420 31.690 142 83 5 369 504 7 140 7.46e-13 66.2
MS.gene067184.t1 MTR_2g450040 22.081 471 309 19 32 476 44 482 8.70e-13 70.9
MS.gene067184.t1 MTR_2g072380 26.545 275 161 8 238 504 249 490 8.95e-13 70.9
MS.gene067184.t1 MTR_2g065360 21.739 368 252 11 121 478 99 440 9.71e-13 70.5
MS.gene067184.t1 MTR_6g084900 26.316 209 143 5 303 505 65 268 9.97e-13 68.9
MS.gene067184.t1 MTR_2g055470 28.500 200 132 5 307 504 327 517 1.17e-12 70.5
MS.gene067184.t1 MTR_5g070830 28.324 173 111 5 303 471 412 575 1.18e-12 70.9
MS.gene067184.t1 MTR_4g104570 30.921 152 97 4 305 455 1 145 1.21e-12 67.4
MS.gene067184.t1 MTR_2g072310 24.535 269 174 6 238 504 109 350 1.80e-12 68.9
MS.gene067184.t1 MTR_5g070710 22.530 506 319 20 9 486 15 475 2.20e-12 69.7
MS.gene067184.t1 MTR_7g075580 25.498 251 167 9 264 502 257 499 2.21e-12 69.7
MS.gene067184.t1 MTR_4g104540 31.169 154 98 4 303 455 230 376 2.30e-12 69.3
MS.gene067184.t1 MTR_2g072260 21.766 487 311 17 45 504 67 510 2.77e-12 69.3
MS.gene067184.t1 MTR_8g466180 25.769 260 173 7 232 481 223 472 3.35e-12 68.9
MS.gene067184.t1 MTR_4g089055 23.839 323 216 9 167 481 186 486 3.79e-12 68.9
MS.gene067184.t1 MTR_5g091760 27.358 212 140 6 245 455 230 428 4.24e-12 68.6
MS.gene067184.t1 MTR_4g077210 26.222 225 153 7 232 455 235 447 4.34e-12 68.6
MS.gene067184.t1 MTR_2g437840 30.045 223 135 10 239 460 241 443 4.65e-12 68.6
MS.gene067184.t1 MTR_4g109470 26.277 274 172 11 222 486 225 477 6.29e-12 68.2
MS.gene067184.t1 MTR_6g084770 23.293 249 182 4 237 481 233 476 6.38e-12 68.2
MS.gene067184.t1 MTR_3g436390 24.364 275 194 7 233 503 231 495 6.75e-12 68.2
MS.gene067184.t1 MTR_3g467200 24.710 259 177 7 237 484 260 511 7.05e-12 68.2
MS.gene067184.t1 MTR_4g104550 23.343 347 234 12 143 481 141 463 7.08e-12 68.2
MS.gene067184.t1 MTR_8g042040 29.801 151 94 4 355 500 359 502 1.15e-11 67.4
MS.gene067184.t1 MTR_3g058000 26.154 260 172 9 232 481 227 476 1.21e-11 67.4
MS.gene067184.t1 MTR_5g007460 25.116 215 150 6 260 474 237 440 1.37e-11 67.0
MS.gene067184.t1 MTR_2g072250 28.986 207 120 7 308 504 324 513 1.67e-11 67.0
MS.gene067184.t1 MTR_8g468780 24.409 254 179 9 226 474 157 402 1.83e-11 66.6
MS.gene067184.t1 MTR_6g084090 64.103 39 14 0 286 324 12 50 2.65e-11 59.3
MS.gene067184.t1 MTR_5g070850 24.000 250 168 7 237 474 233 472 2.69e-11 66.2
MS.gene067184.t1 MTR_7g075540 26.894 264 160 11 257 503 251 498 3.41e-11 65.9
MS.gene067184.t1 MTR_5g094540 26.721 247 157 8 274 505 264 501 3.79e-11 65.9
MS.gene067184.t1 MTR_0638s0020 21.988 332 226 10 156 478 90 397 5.10e-11 65.1
MS.gene067184.t1 MTR_5g070840 31.452 124 80 2 357 478 23 143 5.43e-11 62.0
MS.gene067184.t1 MTR_3g467220 22.846 267 182 8 233 489 247 499 5.69e-11 65.1
MS.gene067184.t1 MTR_3g058220 25.672 335 209 13 160 481 165 472 5.83e-11 65.1
MS.gene067184.t1 MTR_4g048580 24.793 242 158 6 241 474 239 464 5.98e-11 65.1
MS.gene067184.t1 MTR_1g097220 20.623 257 191 8 258 507 280 530 6.39e-11 65.1
MS.gene067184.t1 MTR_5g019010 22.951 244 174 6 237 474 232 467 7.23e-11 64.7
MS.gene067184.t1 MTR_4g095050 24.706 340 210 17 167 488 173 484 7.35e-11 64.7
MS.gene067184.t1 MTR_5g070700 23.954 263 182 8 233 486 225 478 9.26e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067184.t1 AT2G23180 42.054 516 284 4 1 505 1 512 1.50e-144 425
MS.gene067184.t1 AT4G39490 42.442 516 274 6 7 507 11 518 1.09e-137 407
MS.gene067184.t1 AT4G39480 43.164 512 273 5 7 507 11 515 2.83e-136 404
MS.gene067184.t1 AT1G47620 41.649 485 262 5 32 506 43 516 1.89e-133 397
MS.gene067184.t1 AT4G39500 41.797 512 281 7 4 506 14 517 2.54e-133 396
MS.gene067184.t1 AT4G32170 40.900 511 290 5 1 506 1 504 1.04e-131 392
MS.gene067184.t1 AT1G57750 38.911 514 286 5 4 506 1 497 1.94e-130 388
MS.gene067184.t1 AT4G39500 41.895 475 262 5 38 506 1 467 1.55e-126 377
MS.gene067184.t1 AT4G39510 38.596 513 301 4 1 506 1 506 1.15e-125 376
MS.gene067184.t1 AT2G21910 39.918 486 271 5 32 507 34 508 3.70e-125 375
MS.gene067184.t1 AT5G08250 38.298 517 295 9 4 507 37 542 1.40e-124 375
MS.gene067184.t1 AT1G65340 38.809 487 282 3 23 504 27 502 3.28e-124 372
MS.gene067184.t1 AT5G52320 40.123 486 276 4 23 504 27 501 3.95e-123 370
MS.gene067184.t1 AT5G23190 37.160 514 306 7 4 507 36 542 3.18e-121 367
MS.gene067184.t1 AT5G52320 39.709 481 275 4 23 499 27 496 2.03e-120 363
MS.gene067184.t1 AT5G08250 38.900 491 276 9 30 507 1 480 1.77e-119 360
MS.gene067184.t1 AT5G02900 38.953 516 269 9 1 506 1 480 1.18e-111 340
MS.gene067184.t1 AT3G26125 34.756 492 300 6 32 507 48 534 3.69e-107 330
MS.gene067184.t1 AT1G24540 36.458 480 293 6 33 505 46 520 3.27e-106 327
MS.gene067184.t1 AT1G63710 37.910 488 275 10 33 505 33 507 3.55e-106 327
MS.gene067184.t1 AT2G45970 37.143 490 279 9 33 505 33 510 9.40e-104 321
MS.gene067184.t1 AT1G13150 34.765 489 294 7 33 507 42 519 1.68e-102 318
MS.gene067184.t1 AT4G00360 35.619 525 298 13 1 505 7 511 5.96e-101 314
MS.gene067184.t1 AT1G13140 34.100 522 310 10 6 507 19 526 6.61e-101 313
MS.gene067184.t1 AT1G57750 36.652 442 252 5 4 434 1 425 4.49e-100 308
MS.gene067184.t1 AT1G13140 33.723 513 298 9 6 507 19 500 2.37e-97 303
MS.gene067184.t1 AT1G01600 36.089 496 279 11 33 505 33 513 9.15e-97 303
MS.gene067184.t1 AT5G58860 36.475 488 278 10 34 505 37 508 3.77e-96 301
MS.gene067184.t1 AT3G56630 33.265 487 291 12 32 505 33 498 1.57e-82 265
MS.gene067184.t1 AT1G34540 33.540 483 294 12 32 505 33 497 2.80e-81 261
MS.gene067184.t1 AT2G27690 34.499 429 257 10 77 502 76 483 3.11e-77 251
MS.gene067184.t1 AT1G69500 30.784 536 327 9 3 506 1 524 3.10e-76 249
MS.gene067184.t1 AT5G63450 33.333 438 264 12 77 505 84 502 1.09e-74 244
MS.gene067184.t1 AT5G63450 33.333 438 264 12 77 505 142 560 5.15e-74 244
MS.gene067184.t1 AT2G45510 32.213 506 316 14 1 498 15 501 2.87e-73 241
MS.gene067184.t1 AT3G48520 30.709 508 321 14 10 506 13 500 4.99e-73 240
MS.gene067184.t1 AT2G44890 34.354 457 279 13 50 498 58 501 7.56e-72 237
MS.gene067184.t1 AT3G01900 31.352 488 302 12 26 505 28 490 1.25e-68 228
MS.gene067184.t1 AT2G44890 32.898 459 265 15 50 498 58 483 8.63e-66 221
MS.gene067184.t1 AT1G31800 25.155 485 330 18 32 506 109 570 1.71e-32 131
MS.gene067184.t1 AT3G53130 24.146 439 302 12 77 505 122 539 2.18e-30 124
MS.gene067184.t1 AT4G15110 21.881 521 335 17 36 506 81 579 2.93e-25 109
MS.gene067184.t1 AT3G14680 25.380 461 295 16 56 504 88 511 1.86e-24 107
MS.gene067184.t1 AT5G24900 22.965 479 320 15 45 503 76 525 1.45e-23 104
MS.gene067184.t1 AT5G51900 27.703 296 149 7 219 506 2 240 2.37e-23 99.4
MS.gene067184.t1 AT2G26710 24.116 481 311 16 38 500 66 510 9.44e-23 102
MS.gene067184.t1 AT3G14640 24.565 460 302 15 56 504 110 535 4.04e-22 100
MS.gene067184.t1 AT3G14640 24.565 460 302 15 56 504 88 513 4.39e-22 99.8
MS.gene067184.t1 AT3G26210 25.061 411 278 13 105 505 110 500 1.32e-21 98.2
MS.gene067184.t1 AT5G24900 27.698 278 176 7 237 503 145 408 1.34e-21 97.4
MS.gene067184.t1 AT3G14690 24.272 515 318 20 17 500 69 542 2.97e-21 97.4
MS.gene067184.t1 AT3G14690 24.272 515 318 20 17 500 34 507 3.06e-21 97.4
MS.gene067184.t1 AT3G20140 24.862 362 235 12 149 499 163 498 4.61e-21 96.7
MS.gene067184.t1 AT5G52400 24.516 465 310 14 46 500 81 514 1.18e-20 95.5
MS.gene067184.t1 AT5G57260 25.729 377 249 15 118 484 119 474 1.27e-20 95.1
MS.gene067184.t1 AT4G31940 30.075 266 165 8 237 490 248 504 3.59e-20 94.0
MS.gene067184.t1 AT4G31950 29.779 272 169 10 233 491 231 493 6.44e-20 93.2
MS.gene067184.t1 AT1G66030 30.636 173 102 3 1 162 1 166 8.19e-20 87.0
MS.gene067184.t1 AT1G13110 22.432 370 272 9 106 474 112 467 1.09e-19 92.4
MS.gene067184.t1 AT5G24910 21.651 545 360 18 1 505 15 532 3.05e-19 91.3
MS.gene067184.t1 AT3G14610 24.190 463 287 19 56 498 87 505 3.40e-19 90.9
MS.gene067184.t1 AT4G13310 25.496 353 217 14 135 474 142 461 5.02e-19 90.5
MS.gene067184.t1 AT3G25180 27.734 256 171 7 233 484 238 483 6.45e-19 90.1
MS.gene067184.t1 AT2G46960 22.814 469 292 15 57 500 89 512 1.55e-18 89.0
MS.gene067184.t1 AT2G46950 22.340 470 314 13 48 500 130 565 1.65e-18 89.0
MS.gene067184.t1 AT5G35715 26.000 350 229 10 145 484 81 410 3.53e-18 87.4
MS.gene067184.t1 AT2G24180 24.405 336 229 9 167 496 173 489 4.28e-18 87.4
MS.gene067184.t1 AT3G26830 24.933 373 259 13 105 474 107 461 5.09e-18 87.0
MS.gene067184.t1 AT1G13100 23.529 374 264 12 106 474 105 461 9.21e-18 86.3
MS.gene067184.t1 AT5G07990 23.016 504 339 19 1 486 4 476 1.10e-17 86.3
MS.gene067184.t1 AT4G31970 28.947 266 168 8 237 490 247 503 1.26e-17 86.3
MS.gene067184.t1 AT1G64950 25.591 254 177 4 260 505 258 507 1.51e-17 85.9
MS.gene067184.t1 AT4G27710 22.395 451 314 11 57 500 91 512 2.40e-17 85.1
MS.gene067184.t1 AT3G14630 24.784 464 287 17 51 492 72 495 2.40e-17 85.1
MS.gene067184.t1 AT2G45570 25.581 344 235 13 143 481 152 479 2.84e-17 85.1
MS.gene067184.t1 AT4G13290 25.478 314 197 11 167 474 172 454 3.37e-17 84.7
MS.gene067184.t1 AT3G14630 25.054 459 280 18 51 486 127 544 4.10e-17 84.7
MS.gene067184.t1 AT1G64940 25.000 252 178 4 261 505 261 508 4.22e-17 84.3
MS.gene067184.t1 AT3G26180 26.884 398 240 20 101 481 109 472 4.36e-17 84.3
MS.gene067184.t1 AT2G45560 26.513 347 207 15 153 481 162 478 5.06e-17 84.3
MS.gene067184.t1 AT3G26330 24.194 372 251 15 118 481 120 468 8.46e-17 83.6
MS.gene067184.t1 AT2G46960 24.148 352 224 11 158 500 79 396 3.86e-16 80.9
MS.gene067184.t1 AT3G03470 26.872 227 158 3 286 505 284 509 4.09e-16 81.3
MS.gene067184.t1 AT3G48300 22.637 455 265 20 31 455 34 431 5.63e-16 80.9
MS.gene067184.t1 AT3G48270 22.945 292 194 10 167 453 166 431 5.65e-16 80.9
MS.gene067184.t1 AT3G48300 22.637 455 265 20 31 455 36 433 5.67e-16 80.9
MS.gene067184.t1 AT3G26160 25.568 352 224 16 118 455 119 446 6.32e-16 80.9
MS.gene067184.t1 AT3G26170 25.707 389 250 17 106 481 110 472 7.10e-16 80.5
MS.gene067184.t1 AT3G20950 23.249 357 243 12 148 493 166 502 7.59e-16 80.5
MS.gene067184.t1 AT1G67110 31.293 147 96 2 354 500 364 505 8.42e-16 80.5
MS.gene067184.t1 AT1G01190 26.122 245 161 8 272 505 296 531 1.83e-15 79.3
MS.gene067184.t1 AT1G01190 26.122 245 161 8 272 505 301 536 1.84e-15 79.3
MS.gene067184.t1 AT5G38450 21.384 477 314 13 47 500 73 511 1.87e-15 79.3
MS.gene067184.t1 AT5G25120 20.121 497 342 16 7 484 7 467 2.40e-15 79.0
MS.gene067184.t1 AT2G45580 25.444 338 223 11 167 494 21 339 4.83e-15 77.0
MS.gene067184.t1 AT3G61880 25.641 234 148 8 249 474 280 495 5.88e-15 77.8
MS.gene067184.t1 AT4G12320 25.000 272 174 8 222 482 233 485 6.13e-15 77.8
MS.gene067184.t1 AT2G26170 29.032 248 154 6 270 505 201 438 6.26e-15 77.4
MS.gene067184.t1 AT3G61880 25.641 234 148 8 249 474 280 495 6.43e-15 77.8
MS.gene067184.t1 AT2G45580 25.444 338 223 11 167 494 175 493 6.71e-15 77.8
MS.gene067184.t1 AT5G06900 24.728 368 239 15 121 478 126 465 7.24e-15 77.4
MS.gene067184.t1 AT2G25160 27.575 301 184 12 167 453 178 458 8.03e-15 77.4
MS.gene067184.t1 AT2G26170 29.032 248 154 6 270 505 284 521 8.22e-15 77.4
MS.gene067184.t1 AT2G22330 25.490 255 173 8 237 481 269 516 9.26e-15 77.4
MS.gene067184.t1 AT2G22330 25.490 255 173 8 237 481 292 539 1.00e-14 77.4
MS.gene067184.t1 AT3G53300 23.617 470 305 17 29 481 37 469 1.01e-14 77.0
MS.gene067184.t1 AT5G04330 23.320 253 178 6 237 481 231 475 1.09e-14 77.0
MS.gene067184.t1 AT3G26320 23.387 372 252 14 119 479 121 470 1.17e-14 76.6
MS.gene067184.t1 AT4G36220 24.453 274 183 7 222 481 223 486 1.35e-14 76.6
MS.gene067184.t1 AT3G26200 25.401 374 248 13 118 481 117 469 1.47e-14 76.6
MS.gene067184.t1 AT1G64930 27.027 222 150 6 290 505 293 508 2.14e-14 75.9
MS.gene067184.t1 AT4G37340 23.822 382 224 14 88 459 116 440 2.21e-14 75.9
MS.gene067184.t1 AT5G47990 24.011 379 234 16 148 505 162 507 3.90e-14 75.1
MS.gene067184.t1 AT2G12190 24.219 256 180 5 260 505 258 509 6.82e-14 74.3
MS.gene067184.t1 AT4G39950 20.307 522 344 19 1 481 24 514 1.42e-13 73.6
MS.gene067184.t1 AT4G39950 24.314 255 176 8 237 481 307 554 1.45e-13 73.6
MS.gene067184.t1 AT2G30770 27.746 173 119 3 303 474 293 460 1.65e-13 73.2
MS.gene067184.t1 AT4G12310 24.265 272 176 9 222 482 235 487 2.21e-13 72.8
MS.gene067184.t1 AT5G24950 21.330 361 257 10 119 474 122 460 2.47e-13 72.8
MS.gene067184.t1 AT4G37330 22.556 399 242 13 84 474 113 452 3.77e-13 72.0
MS.gene067184.t1 AT4G20240 24.513 359 230 14 79 427 86 413 3.99e-13 72.0
MS.gene067184.t1 AT3G20120 23.304 339 223 13 148 474 25 338 4.08e-13 71.2
MS.gene067184.t1 AT3G20120 23.304 339 223 13 148 474 25 338 4.08e-13 71.2
MS.gene067184.t1 AT3G20120 23.304 339 223 13 148 474 25 338 4.08e-13 71.2
MS.gene067184.t1 AT2G14100 24.286 350 231 12 167 505 181 507 5.31e-13 71.6
MS.gene067184.t1 AT3G48280 25.726 241 150 9 221 453 212 431 5.58e-13 71.6
MS.gene067184.t1 AT4G15360 20.747 482 320 19 1 458 13 456 1.29e-12 70.5
MS.gene067184.t1 AT1G50560 24.377 361 245 15 147 499 165 505 1.29e-12 70.5
MS.gene067184.t1 AT5G25180 20.808 495 335 17 7 481 7 464 1.34e-12 70.5
MS.gene067184.t1 AT3G20120 23.711 291 193 11 196 474 201 474 1.35e-12 70.5
MS.gene067184.t1 AT4G13770 22.013 318 230 7 167 481 168 470 1.54e-12 70.1
MS.gene067184.t1 AT4G31500 24.024 333 232 12 167 494 167 483 1.89e-12 69.7
MS.gene067184.t1 AT5G05260 21.474 475 325 18 26 474 36 488 3.24e-12 69.3
MS.gene067184.t1 AT1G66540 23.511 319 215 13 159 474 50 342 4.06e-12 68.2
MS.gene067184.t1 AT2G27010 22.222 387 246 17 142 507 134 486 4.85e-12 68.6
MS.gene067184.t1 AT4G12300 20.842 499 344 18 2 482 18 483 7.54e-12 68.2
MS.gene067184.t1 AT3G20100 23.056 360 241 14 148 493 161 498 8.55e-12 67.8
MS.gene067184.t1 AT3G32047 23.529 357 244 14 124 474 139 472 9.13e-12 67.8
MS.gene067184.t1 AT3G26190 23.810 378 257 13 118 485 117 473 1.04e-11 67.4
MS.gene067184.t1 AT4G37400 24.088 274 180 8 239 506 235 486 1.56e-11 67.0
MS.gene067184.t1 AT3G48310 19.239 473 325 15 23 480 29 459 1.59e-11 67.0
MS.gene067184.t1 AT1G50520 22.042 431 292 18 92 505 107 510 1.60e-11 67.0
MS.gene067184.t1 AT3G44250 26.221 389 254 15 102 481 104 468 1.77e-11 67.0
MS.gene067184.t1 AT4G37370 26.457 223 141 7 239 459 238 439 1.80e-11 66.6
MS.gene067184.t1 AT3G20935 28.877 187 117 8 296 474 123 301 2.34e-11 65.9
MS.gene067184.t1 AT2G42250 22.656 256 181 7 237 484 241 487 2.69e-11 66.2
MS.gene067184.t1 AT3G26180 27.155 232 139 8 254 481 133 338 2.76e-11 65.5
MS.gene067184.t1 AT1G64900 30.065 153 101 4 359 506 354 505 2.99e-11 66.2
MS.gene067184.t1 AT3G20960 22.910 323 216 13 147 459 57 356 3.02e-11 65.9
MS.gene067184.t1 AT5G09970 21.569 255 190 6 255 504 285 534 3.27e-11 66.2
MS.gene067184.t1 AT3G28740 30.270 185 114 6 298 480 298 469 3.31e-11 65.9
MS.gene067184.t1 AT1G66540 27.072 181 121 5 294 474 114 283 5.17e-11 64.3
MS.gene067184.t1 AT3G20960 23.457 324 213 13 147 459 160 459 5.63e-11 65.5
MS.gene067184.t1 AT2G42850 24.201 219 153 5 241 459 233 438 7.47e-11 64.7
MS.gene067184.t1 AT3G20130 32.484 157 94 7 357 505 328 480 7.91e-11 64.7
MS.gene067184.t1 AT3G48320 19.632 489 349 15 1 480 6 459 9.40e-11 64.7

Find 94 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACCTGCACTTTCCTATT+TGG 0.139575 1.2:+20822545 MS.gene067184:CDS
ATTCCAAGTATTGGCCAATT+TGG 0.171304 1.2:-20822098 None:intergenic
TAGTATAAAACCCTTGTATT+TGG 0.178056 1.2:-20823199 None:intergenic
TTCTGTTGCGTCTCCAACTA+TGG 0.203732 1.2:-20822064 None:intergenic
CAGGTCTCAGTTGGTTCTTT+TGG 0.226270 1.2:+20822951 MS.gene067184:CDS
GTTTCTTCTCTTGACCAATT+TGG 0.239281 1.2:-20822709 None:intergenic
CATAGTGATTGGAAATATTA+TGG 0.276511 1.2:-20822136 None:intergenic
TCTTTACCCAAACAACTTCT+TGG 0.276591 1.2:-20823355 None:intergenic
TGGGAAGGATGGAGAAAATA+TGG 0.279648 1.2:+20823233 MS.gene067184:CDS
CACATCGTAAGCAAGAATTT+TGG 0.320133 1.2:+20822266 MS.gene067184:CDS
TGCAGGGCCAAGAAGTTGTT+TGG 0.321225 1.2:+20823348 MS.gene067184:CDS
ATAGAAAGCCTTGGAGTTAC+AGG 0.329072 1.2:-20823454 None:intergenic
TTCCAAGTATTGGCCAATTT+GGG 0.342004 1.2:-20822097 None:intergenic
TGATTCCGATGAATGGAAAA+AGG 0.359177 1.2:+20822355 MS.gene067184:CDS
TGCAGCTTCCATACAAAAGT+TGG 0.362841 1.2:-20822677 None:intergenic
GAAATGCAATCATCCCAAAT+TGG 0.367942 1.2:+20822084 MS.gene067184:CDS
CACTTTCTTTGAAATGAAGA+TGG 0.370803 1.2:+20823381 MS.gene067184:CDS
GAAGTTTCGCATACATTTAG+TGG 0.384005 1.2:+20823423 MS.gene067184:CDS
TCATCGGAATCAGAATTTAA+AGG 0.384883 1.2:-20822344 None:intergenic
ACAAACAATTCAGAAGAAAC+TGG 0.385522 1.2:+20822433 MS.gene067184:CDS
TGGCTGCCGCGGCTATACTA+TGG 0.392000 1.2:+20823401 MS.gene067184:CDS
TCTTCTTATTTGTCCATAGT+TGG 0.398646 1.2:+20822051 MS.gene067184:CDS
ACGATGTGGTGTACATTCAT+TGG 0.404057 1.2:-20822251 None:intergenic
TAAATTCTGATTCCGATGAA+TGG 0.404261 1.2:+20822348 MS.gene067184:CDS
ATCCCAAATTGGCCAATACT+TGG 0.406326 1.2:+20822095 MS.gene067184:CDS
ACCATGATGTTTCAAAACTA+AGG 0.411361 1.2:-20822168 None:intergenic
TTGTATGGAAGCTGCAGAAA+TGG 0.418426 1.2:+20822684 MS.gene067184:CDS
AATCTATTGTTAGCGGGAAA+TGG 0.425953 1.2:+20822917 MS.gene067184:CDS
AATTTGGATCGAATCCAAAT+AGG 0.426721 1.2:-20822559 None:intergenic
CCAAGGCTTTCTATTACCCT+TGG 0.433155 1.2:+20823463 MS.gene067184:CDS
CGCTGGTTCACGAGCACCAC+TGG 0.435293 1.2:+20822212 MS.gene067184:CDS
GAGCTATATGTGAAGCCTTA+AGG 0.440405 1.2:+20823101 MS.gene067184:CDS
TATGGACAAATAAGAAGAAC+AGG 0.443077 1.2:-20822046 None:intergenic
TTTATACTATTTGTATTCGA+TGG 0.445779 1.2:+20823213 MS.gene067184:CDS
TAAATCTCTTTCTATGATTG+AGG 0.448525 1.2:+20822628 MS.gene067184:CDS
CTGCAGAAATGGCTCCAAAT+TGG 0.450677 1.2:+20822695 MS.gene067184:CDS
GGAAATGGCACAGTTAGTTC+AGG 0.453055 1.2:+20822932 MS.gene067184:CDS
GGTTATATAATCATAGTGAT+TGG 0.455646 1.2:-20822147 None:intergenic
CAGTTAGTTCAGGTCTCAGT+TGG 0.465641 1.2:+20822942 MS.gene067184:CDS
ATCGAAAGTGAACCTTGTTA+AGG 0.468972 1.2:-20822522 None:intergenic
GCAGGGCCAAGAAGTTGTTT+GGG 0.474195 1.2:+20823349 MS.gene067184:CDS
ATACTGAAAGGAGCGGGAAA+AGG 0.484482 1.2:+20822857 MS.gene067184:CDS
ATAATCTTGACTTCCACAAC+AGG 0.485102 1.2:-20822989 None:intergenic
TCACGCCATGTTTCATTCCA+AGG 0.485218 1.2:-20823480 None:intergenic
GGGAAGGATGGAGAAAATAT+GGG 0.486649 1.2:+20823234 MS.gene067184:CDS
CATAGAAAGAGATTTATGAT+AGG 0.489026 1.2:-20822621 None:intergenic
CATGATCAAGAAACGGTAGT+AGG 0.494129 1.2:-20822463 None:intergenic
AAACTTGATCACTTCAATTG+TGG 0.501453 1.2:+20823048 MS.gene067184:CDS
CACGCCATGTTTCATTCCAA+GGG 0.502753 1.2:-20823479 None:intergenic
AAGTTCATAGCTTTCAATGC+AGG 0.505996 1.2:+20823331 MS.gene067184:CDS
AACAATTTCAGTCATGATCT+CGG 0.509884 1.2:+20822590 MS.gene067184:CDS
TACTGAAAGGAGCGGGAAAA+GGG 0.515947 1.2:+20822858 MS.gene067184:CDS
GACGGTAGCATTCCAAGTAT+TGG 0.519839 1.2:-20822107 None:intergenic
TTATACTATTTGTATTCGAT+GGG 0.524216 1.2:+20823214 MS.gene067184:CDS
AGTTCATAGCTTTCAATGCA+GGG 0.528807 1.2:+20823332 MS.gene067184:CDS
ACTATTTGTATTCGATGGGA+AGG 0.535443 1.2:+20823218 MS.gene067184:CDS
TACAGGAGGATAAAGCCTTA+AGG 0.537529 1.2:-20823116 None:intergenic
ATGTTCATGATTCAGTGCAT+TGG 0.538171 1.2:+20822008 MS.gene067184:CDS
TTTGTATTCGATGGGAAGGA+TGG 0.543216 1.2:+20823222 MS.gene067184:CDS
TGTTTCATGTCATCCTGTTG+TGG 0.543232 1.2:+20822976 MS.gene067184:CDS
TTTCGCATACATTTAGTGGA+AGG 0.543334 1.2:+20823427 MS.gene067184:CDS
TTGAGGAAGCAATAGCCTAC+AGG 0.546459 1.2:+20822645 MS.gene067184:CDS
AAAGAGATACTGAAAGGAGC+GGG 0.546629 1.2:+20822851 MS.gene067184:CDS
ATTCAGCAGCACTAGAGAAG+TGG 0.549406 1.2:+20822805 MS.gene067184:CDS
GCACTCAATCTATTGTTAGC+GGG 0.555898 1.2:+20822911 MS.gene067184:CDS
TTCATGTAAGTCCAAATACA+AGG 0.563468 1.2:+20823188 MS.gene067184:CDS
CCAAGGGTAATAGAAAGCCT+TGG 0.572510 1.2:-20823463 None:intergenic
TGAAATGAAGATGGCTGCCG+CGG 0.575989 1.2:+20823390 MS.gene067184:CDS
TGCACTCAATCTATTGTTAG+CGG 0.578670 1.2:+20822910 MS.gene067184:CDS
TTGATAAAAGAGATACTGAA+AGG 0.579823 1.2:+20822845 MS.gene067184:CDS
ATGGATGCATGATCAAGAAA+CGG 0.582819 1.2:-20822470 None:intergenic
GGACTTACATGAACTCCACT+AGG 0.584023 1.2:-20823178 None:intergenic
GAATCCAAATAGGAAAGTGC+AGG 0.593025 1.2:-20822549 None:intergenic
TGGAATTTAAGCCTGAGAGA+TGG 0.597446 1.2:+20823269 MS.gene067184:CDS
ACTTGCATGATGCCTTAACA+AGG 0.609106 1.2:+20822510 MS.gene067184:CDS
AAAAGAGATACTGAAAGGAG+CGG 0.610407 1.2:+20822850 MS.gene067184:CDS
ATTACCCTTGGAATGAAACA+TGG 0.622224 1.2:+20823475 MS.gene067184:CDS
AATATGGGGAGAAGACTGCA+TGG 0.624387 1.2:+20823249 MS.gene067184:CDS
AAAGCTGATATACTTCCTAG+TGG 0.629809 1.2:+20823163 MS.gene067184:CDS
AAGGTCATCCTGTAACTCCA+AGG 0.643847 1.2:+20823446 MS.gene067184:CDS
CAAAATTCTTGCTTACGATG+TGG 0.649193 1.2:-20822265 None:intergenic
AAAGCTATGAACTTGTAAGA+CGG 0.652803 1.2:-20823322 None:intergenic
GAAATATTATGGAGAGCCGA+CGG 0.656271 1.2:-20822125 None:intergenic
TCATGTAAGTCCAAATACAA+GGG 0.660080 1.2:+20823189 MS.gene067184:CDS
AGTTGGAAAGAAGCACCTGT+AGG 0.664765 1.2:-20822660 None:intergenic
GGAAGGATGGAGAAAATATG+GGG 0.667213 1.2:+20823235 MS.gene067184:CDS
TGGAATGAAACATGGCGTGA+AGG 0.669418 1.2:+20823483 MS.gene067184:CDS
GATAAACTAGTTTACCTCCA+CGG 0.672570 1.2:+20823079 MS.gene067184:CDS
ATCCATAGTAAAAGCTCACG+TGG 0.685507 1.2:+20822487 MS.gene067184:CDS
AAACTTCCATAGTATAGCCG+CGG 0.711701 1.2:-20823407 None:intergenic
AGGCTTCACATATAGCTCCG+TGG 0.717814 1.2:-20823096 None:intergenic
AATACTTGGAATGCTACCGT+CGG 0.718723 1.2:+20822109 MS.gene067184:CDS
ATCGCTCGTAAAGATACCAG+TGG 0.722194 1.2:-20822228 None:intergenic
CTTCACATATAGCTCCGTGG+AGG 0.753666 1.2:-20823093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATACTATTTGTATTCGAT+GGG + chr1.2:20823214-20823233 MS.gene067184:CDS 20.0%
!! TTTATACTATTTGTATTCGA+TGG + chr1.2:20823213-20823232 MS.gene067184:CDS 20.0%
!!! AAAGAAACTTTTGAAACTTT+TGG + chr1.2:20822314-20822333 MS.gene067184:CDS 20.0%
! CATAGAAAGAGATTTATGAT+AGG - chr1.2:20822624-20822643 None:intergenic 25.0%
! CATAGTGATTGGAAATATTA+TGG - chr1.2:20822139-20822158 None:intergenic 25.0%
! GGTTATATAATCATAGTGAT+TGG - chr1.2:20822150-20822169 None:intergenic 25.0%
! TAAATCTCTTTCTATGATTG+AGG + chr1.2:20822628-20822647 MS.gene067184:CDS 25.0%
! TAGTATAAAACCCTTGTATT+TGG - chr1.2:20823202-20823221 None:intergenic 25.0%
! TTGATAAAAGAGATACTGAA+AGG + chr1.2:20822845-20822864 MS.gene067184:CDS 25.0%
!!! AAATTGTTTTGAAGGCAATT+TGG - chr1.2:20822578-20822597 None:intergenic 25.0%
AAACTTGATCACTTCAATTG+TGG + chr1.2:20823048-20823067 MS.gene067184:CDS 30.0%
AAAGCTATGAACTTGTAAGA+CGG - chr1.2:20823325-20823344 None:intergenic 30.0%
AACAATTTCAGTCATGATCT+CGG + chr1.2:20822590-20822609 MS.gene067184:CDS 30.0%
AATTTGGATCGAATCCAAAT+AGG - chr1.2:20822562-20822581 None:intergenic 30.0%
ACAAACAATTCAGAAGAAAC+TGG + chr1.2:20822433-20822452 MS.gene067184:CDS 30.0%
ACCATGATGTTTCAAAACTA+AGG - chr1.2:20822171-20822190 None:intergenic 30.0%
TAAATTCTGATTCCGATGAA+TGG + chr1.2:20822348-20822367 MS.gene067184:CDS 30.0%
TATGGACAAATAAGAAGAAC+AGG - chr1.2:20822049-20822068 None:intergenic 30.0%
TCATCGGAATCAGAATTTAA+AGG - chr1.2:20822347-20822366 None:intergenic 30.0%
TCATGTAAGTCCAAATACAA+GGG + chr1.2:20823189-20823208 MS.gene067184:CDS 30.0%
TTCATGTAAGTCCAAATACA+AGG + chr1.2:20823188-20823207 MS.gene067184:CDS 30.0%
! ATTGCAAACTTTTGCTCAAT+AGG - chr1.2:20823142-20823161 None:intergenic 30.0%
! TCTTCTTATTTGTCCATAGT+TGG + chr1.2:20822051-20822070 MS.gene067184:CDS 30.0%
!! AATTTTGGCAACTACGAAAA+AGG + chr1.2:20822281-20822300 MS.gene067184:CDS 30.0%
!! ATTTTGGCAACTACGAAAAA+GGG + chr1.2:20822282-20822301 MS.gene067184:CDS 30.0%
!! CACTTTCTTTGAAATGAAGA+TGG + chr1.2:20823381-20823400 MS.gene067184:CDS 30.0%
!! TGCTTCACTCATTTTTCAAA+AGG + chr1.2:20822387-20822406 MS.gene067184:CDS 30.0%
!!! ACCTTAGTTTTGAAACATCA+TGG + chr1.2:20822167-20822186 MS.gene067184:CDS 30.0%
!!! CATGACTGAAATTGTTTTGA+AGG - chr1.2:20822586-20822605 None:intergenic 30.0%
!!! TTAGTTTTGAAACATCATGG+TGG + chr1.2:20822170-20822189 MS.gene067184:CDS 30.0%
AAAAGAGATACTGAAAGGAG+CGG + chr1.2:20822850-20822869 MS.gene067184:CDS 35.0%
AAAGCTGATATACTTCCTAG+TGG + chr1.2:20823163-20823182 MS.gene067184:CDS 35.0%
AAGTTCATAGCTTTCAATGC+AGG + chr1.2:20823331-20823350 MS.gene067184:CDS 35.0%
AATCTATTGTTAGCGGGAAA+TGG + chr1.2:20822917-20822936 MS.gene067184:CDS 35.0%
ACTATTTGTATTCGATGGGA+AGG + chr1.2:20823218-20823237 MS.gene067184:CDS 35.0%
AGTTCATAGCTTTCAATGCA+GGG + chr1.2:20823332-20823351 MS.gene067184:CDS 35.0%
ATAATCTTGACTTCCACAAC+AGG - chr1.2:20822992-20823011 None:intergenic 35.0%
ATCGAAAGTGAACCTTGTTA+AGG - chr1.2:20822525-20822544 None:intergenic 35.0%
ATGGATGCATGATCAAGAAA+CGG - chr1.2:20822473-20822492 None:intergenic 35.0%
ATGTTCATGATTCAGTGCAT+TGG + chr1.2:20822008-20822027 MS.gene067184:CDS 35.0%
ATTACCCTTGGAATGAAACA+TGG + chr1.2:20823475-20823494 MS.gene067184:CDS 35.0%
CAAAATTCTTGCTTACGATG+TGG - chr1.2:20822268-20822287 None:intergenic 35.0%
GAAATGCAATCATCCCAAAT+TGG + chr1.2:20822084-20822103 MS.gene067184:CDS 35.0%
GAAGTTTCGCATACATTTAG+TGG + chr1.2:20823423-20823442 MS.gene067184:CDS 35.0%
GAGAGATGGATATCAAAAAG+TGG + chr1.2:20823283-20823302 MS.gene067184:CDS 35.0%
GTTTCTTCTCTTGACCAATT+TGG - chr1.2:20822712-20822731 None:intergenic 35.0%
TCTTTACCCAAACAACTTCT+TGG - chr1.2:20823358-20823377 None:intergenic 35.0%
TGATTCCGATGAATGGAAAA+AGG + chr1.2:20822355-20822374 MS.gene067184:CDS 35.0%
TGCACTCAATCTATTGTTAG+CGG + chr1.2:20822910-20822929 MS.gene067184:CDS 35.0%
TTTCGCATACATTTAGTGGA+AGG + chr1.2:20823427-20823446 MS.gene067184:CDS 35.0%
! AACTTTTGCTCAATAGGTAC+AGG - chr1.2:20823136-20823155 None:intergenic 35.0%
! CACATCGTAAGCAAGAATTT+TGG + chr1.2:20822266-20822285 MS.gene067184:CDS 35.0%
! CTTTTTGATATCCATCTCTC+AGG - chr1.2:20823283-20823302 None:intergenic 35.0%
! GATAAACTAGTTTACCTCCA+CGG + chr1.2:20823079-20823098 MS.gene067184:CDS 35.0%
! GCTTCTTTCCAACTTTTGTA+TGG + chr1.2:20822669-20822688 MS.gene067184:CDS 35.0%
!! ATTCCAAGTATTGGCCAATT+TGG - chr1.2:20822101-20822120 None:intergenic 35.0%
!! TCTGTTTTGCTCTTCAAGTT+TGG - chr1.2:20822786-20822805 None:intergenic 35.0%
!! TTCCAAGTATTGGCCAATTT+GGG - chr1.2:20822100-20822119 None:intergenic 35.0%
!!! ACTTTTGAAACTTTTGGAGC+TGG + chr1.2:20822320-20822339 MS.gene067184:CDS 35.0%
AAACTTCCATAGTATAGCCG+CGG - chr1.2:20823410-20823429 None:intergenic 40.0%
AAAGAGATACTGAAAGGAGC+GGG + chr1.2:20822851-20822870 MS.gene067184:CDS 40.0%
AATACTTGGAATGCTACCGT+CGG + chr1.2:20822109-20822128 MS.gene067184:CDS 40.0%
ACGATGTGGTGTACATTCAT+TGG - chr1.2:20822254-20822273 None:intergenic 40.0%
ACTTGCATGATGCCTTAACA+AGG + chr1.2:20822510-20822529 MS.gene067184:CDS 40.0%
ATAGAAAGCCTTGGAGTTAC+AGG - chr1.2:20823457-20823476 None:intergenic 40.0%
ATCACCTGCACTTTCCTATT+TGG + chr1.2:20822545-20822564 MS.gene067184:CDS 40.0%
ATCCATAGTAAAAGCTCACG+TGG + chr1.2:20822487-20822506 MS.gene067184:CDS 40.0%
ATCCCAAATTGGCCAATACT+TGG + chr1.2:20822095-20822114 MS.gene067184:CDS 40.0%
CATGATCAAGAAACGGTAGT+AGG - chr1.2:20822466-20822485 None:intergenic 40.0%
GAAATATTATGGAGAGCCGA+CGG - chr1.2:20822128-20822147 None:intergenic 40.0%
GAGCTATATGTGAAGCCTTA+AGG + chr1.2:20823101-20823120 MS.gene067184:CDS 40.0%
GCACTCAATCTATTGTTAGC+GGG + chr1.2:20822911-20822930 MS.gene067184:CDS 40.0%
GGAAGGATGGAGAAAATATG+GGG + chr1.2:20823235-20823254 MS.gene067184:CDS 40.0%
GGGAAGGATGGAGAAAATAT+GGG + chr1.2:20823234-20823253 MS.gene067184:CDS 40.0%
TACAGGAGGATAAAGCCTTA+AGG - chr1.2:20823119-20823138 None:intergenic 40.0%
TGCAGCTTCCATACAAAAGT+TGG - chr1.2:20822680-20822699 None:intergenic 40.0%
TGGAATTTAAGCCTGAGAGA+TGG + chr1.2:20823269-20823288 MS.gene067184:CDS 40.0%
TGGGAAGGATGGAGAAAATA+TGG + chr1.2:20823233-20823252 MS.gene067184:CDS 40.0%
TGTTTCATGTCATCCTGTTG+TGG + chr1.2:20822976-20822995 MS.gene067184:CDS 40.0%
TTGTATGGAAGCTGCAGAAA+TGG + chr1.2:20822684-20822703 MS.gene067184:CDS 40.0%
TTTGTATTCGATGGGAAGGA+TGG + chr1.2:20823222-20823241 MS.gene067184:CDS 40.0%
! AACATCATGGTGGCACTTTT+AGG + chr1.2:20822180-20822199 MS.gene067184:CDS 40.0%
! CCTCTCCTTTTTCCATTCAT+CGG - chr1.2:20822363-20822382 None:intergenic 40.0%
! GAATCCAAATAGGAAAGTGC+AGG - chr1.2:20822552-20822571 None:intergenic 40.0%
! TTTTGCTCAATAGGTACAGG+AGG - chr1.2:20823133-20823152 None:intergenic 40.0%
AAGGTCATCCTGTAACTCCA+AGG + chr1.2:20823446-20823465 MS.gene067184:CDS 45.0%
AATATGGGGAGAAGACTGCA+TGG + chr1.2:20823249-20823268 MS.gene067184:CDS 45.0%
ATACTGAAAGGAGCGGGAAA+AGG + chr1.2:20822857-20822876 MS.gene067184:CDS 45.0%
ATCGCTCGTAAAGATACCAG+TGG - chr1.2:20822231-20822250 None:intergenic 45.0%
ATTCAGCAGCACTAGAGAAG+TGG + chr1.2:20822805-20822824 MS.gene067184:CDS 45.0%
CACGCCATGTTTCATTCCAA+GGG - chr1.2:20823482-20823501 None:intergenic 45.0%
CAGTTAGTTCAGGTCTCAGT+TGG + chr1.2:20822942-20822961 MS.gene067184:CDS 45.0%
CCAAGGCTTTCTATTACCCT+TGG + chr1.2:20823463-20823482 MS.gene067184:CDS 45.0%
CCAAGGGTAATAGAAAGCCT+TGG - chr1.2:20823466-20823485 None:intergenic 45.0%
CCGATGAATGGAAAAAGGAG+AGG + chr1.2:20822360-20822379 MS.gene067184:CDS 45.0%
CTGCAGAAATGGCTCCAAAT+TGG + chr1.2:20822695-20822714 MS.gene067184:CDS 45.0%
GACGGTAGCATTCCAAGTAT+TGG - chr1.2:20822110-20822129 None:intergenic 45.0%
GGAAATGGCACAGTTAGTTC+AGG + chr1.2:20822932-20822951 MS.gene067184:CDS 45.0%
GGACTTACATGAACTCCACT+AGG - chr1.2:20823181-20823200 None:intergenic 45.0%
TACTGAAAGGAGCGGGAAAA+GGG + chr1.2:20822858-20822877 MS.gene067184:CDS 45.0%
TCACGCCATGTTTCATTCCA+AGG - chr1.2:20823483-20823502 None:intergenic 45.0%
TGGAATGAAACATGGCGTGA+AGG + chr1.2:20823483-20823502 MS.gene067184:CDS 45.0%
TTCTGTTGCGTCTCCAACTA+TGG - chr1.2:20822067-20822086 None:intergenic 45.0%
TTGAGGAAGCAATAGCCTAC+AGG + chr1.2:20822645-20822664 MS.gene067184:CDS 45.0%
! GTCCACGTGAGCTTTTACTA+TGG - chr1.2:20822492-20822511 None:intergenic 45.0%
!! AGTTGGAAAGAAGCACCTGT+AGG - chr1.2:20822663-20822682 None:intergenic 45.0%
!! CAGGTCTCAGTTGGTTCTTT+TGG + chr1.2:20822951-20822970 MS.gene067184:CDS 45.0%
!!! CTTTTAGGTTTGAAGGACGC+TGG + chr1.2:20822195-20822214 MS.gene067184:CDS 45.0%
!!! GGTGGCACTTTTAGGTTTGA+AGG + chr1.2:20822188-20822207 MS.gene067184:CDS 45.0%
AGGCTTCACATATAGCTCCG+TGG - chr1.2:20823099-20823118 None:intergenic 50.0%
CTTCACATATAGCTCCGTGG+AGG - chr1.2:20823096-20823115 None:intergenic 50.0%
GCAGGGCCAAGAAGTTGTTT+GGG + chr1.2:20823349-20823368 MS.gene067184:CDS 50.0%
TGAAATGAAGATGGCTGCCG+CGG + chr1.2:20823390-20823409 MS.gene067184:CDS 50.0%
TGCAGGGCCAAGAAGTTGTT+TGG + chr1.2:20823348-20823367 MS.gene067184:CDS 50.0%
TGGCTGCCGCGGCTATACTA+TGG + chr1.2:20823401-20823420 MS.gene067184:CDS 60.0%
!! CGCTGGTTCACGAGCACCAC+TGG + chr1.2:20822212-20822231 MS.gene067184:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 20822008 20823531 20822008 ID=MS.gene067184
chr1.2 mRNA 20822008 20823531 20822008 ID=MS.gene067184.t1;Parent=MS.gene067184
chr1.2 exon 20822008 20823531 20822008 ID=MS.gene067184.t1.exon1;Parent=MS.gene067184.t1
chr1.2 CDS 20822008 20823531 20822008 ID=cds.MS.gene067184.t1;Parent=MS.gene067184.t1
Gene Sequence

>MS.gene067184

ATGTTCATGATTCAGTGCATTGGAGCATTTGTAGCAATCCTGTTCTTCTTATTTGTCCATAGTTGGAGACGCAACAGAAATGCAATCATCCCAAATTGGCCAATACTTGGAATGCTACCGTCGGCTCTCCATAATATTTCCAATCACTATGATTATATAACCTTAGTTTTGAAACATCATGGTGGCACTTTTAGGTTTGAAGGACGCTGGTTCACGAGCACCACTGGTATCTTTACGAGCGATCCAATGAATGTACACCACATCGTAAGCAAGAATTTTGGCAACTACGAAAAAGGGTCTAATTTCAAAGAAACTTTTGAAACTTTTGGAGCTGGACCTTTAAATTCTGATTCCGATGAATGGAAAAAGGAGAGGACTATGCTTCACTCATTTTTCAAAAGGAAAAACTTTGAAAACTTTCTCAAACAAACAATTCAGAAGAAACTGGAGAATTTCCTACTACCGTTTCTTGATCATGCATCCATAGTAAAAGCTCACGTGGACTTGCATGATGCCTTAACAAGGTTCACTTTCGATATCACCTGCACTTTCCTATTTGGATTCGATCCAAATTGCCTTCAAAACAATTTCAGTCATGATCTCGGAGATATCACCTATCATAAATCTCTTTCTATGATTGAGGAAGCAATAGCCTACAGGTGCTTCTTTCCAACTTTTGTATGGAAGCTGCAGAAATGGCTCCAAATTGGTCAAGAGAAGAAACTCAAAGTAGCTCAAGAAAGTCTTGACAAATTCTTGCATGAATGCATAATATCCAAACTTGAAGAGCAAAACAGATTCAGCAGCACTAGAGAAGTGGAAGATTCTGACTGTGACTTGATAAAAGAGATACTGAAAGGAGCGGGAAAAGGGAAAACAAGTGAGAAGTATCTTAGAGACACTGCACTCAATCTATTGTTAGCGGGAAATGGCACAGTTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCATGTCATCCTGTTGTGGAAGTCAAGATTATTCAAGAGATGAAAGATAATTGTCTATCTGTTGATGAAAACTTGATCACTTCAATTGTGGAAAAGCTTGATAAACTAGTTTACCTCCACGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTGTACCTATTGAGCAAAAGTTTGCAATCAAAGCTGATATACTTCCTAGTGGAGTTCATGTAAGTCCAAATACAAGGGTTTTATACTATTTGTATTCGATGGGAAGGATGGAGAAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCAAAAAGTGGACAAATTATACATGTGCCGTCTTACAAGTTCATAGCTTTCAATGCAGGGCCAAGAAGTTGTTTGGGTAAAGACATCACTTTCTTTGAAATGAAGATGGCTGCCGCGGCTATACTATGGAAGTTTCGCATACATTTAGTGGAAGGTCATCCTGTAACTCCAAGGCTTTCTATTACCCTTGGAATGAAACATGGCGTGAAGGTGAAAGTCACTAAAAGATGCATTTGA

Protein sequence

>MS.gene067184.t1

MFMIQCIGAFVAILFFLFVHSWRRNRNAIIPNWPILGMLPSALHNISNHYDYITLVLKHHGGTFRFEGRWFTSTTGIFTSDPMNVHHIVSKNFGNYEKGSNFKETFETFGAGPLNSDSDEWKKERTMLHSFFKRKNFENFLKQTIQKKLENFLLPFLDHASIVKAHVDLHDALTRFTFDITCTFLFGFDPNCLQNNFSHDLGDITYHKSLSMIEEAIAYRCFFPTFVWKLQKWLQIGQEKKLKVAQESLDKFLHECIISKLEEQNRFSSTREVEDSDCDLIKEILKGAGKGKTSEKYLRDTALNLLLAGNGTVSSGLSWFFWLVSCHPVVEVKIIQEMKDNCLSVDENLITSIVEKLDKLVYLHGAICEALRLYPPVPIEQKFAIKADILPSGVHVSPNTRVLYYLYSMGRMEKIWGEDCMEFKPERWISKSGQIIHVPSYKFIAFNAGPRSCLGKDITFFEMKMAAAAILWKFRIHLVEGHPVTPRLSITLGMKHGVKVKVTKRCI