AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41007


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41007.t1 MTR_1g035670 90.873 504 33 2 1 491 1 504 0.0 944
MS.gene41007.t1 MTR_1g036130 81.139 509 77 5 1 491 1 508 0.0 827
MS.gene41007.t1 MTR_1g035760 79.563 504 67 3 1 491 1 481 0.0 811
MS.gene41007.t1 MTR_1g036010 71.176 510 127 5 1 491 1 509 0.0 752
MS.gene41007.t1 MTR_1g035860 82.299 435 64 2 10 431 16 450 0.0 736
MS.gene41007.t1 MTR_1g035830 70.334 509 133 4 1 491 1 509 0.0 734
MS.gene41007.t1 MTR_1g035940 69.020 510 138 5 1 491 1 509 0.0 724
MS.gene41007.t1 MTR_1g035750 62.475 509 171 5 1 491 1 507 0.0 644
MS.gene41007.t1 MTR_1g035580 60.470 511 169 8 1 491 1 498 0.0 613
MS.gene41007.t1 MTR_1g035790 58.696 506 192 6 1 491 1 504 0.0 601
MS.gene41007.t1 MTR_1g036200 60.359 502 171 7 10 491 8 501 0.0 599
MS.gene41007.t1 MTR_1g036270 57.476 515 193 9 1 491 1 513 0.0 588
MS.gene41007.t1 MTR_1g050362 58.416 505 187 8 7 490 5 507 0.0 585
MS.gene41007.t1 MTR_1g069715 70.762 407 100 5 84 471 1 407 0.0 578
MS.gene41007.t1 MTR_1g035800 57.115 513 195 7 1 489 1 512 0.0 564
MS.gene41007.t1 MTR_7g033580 53.119 497 208 6 10 491 10 496 0.0 526
MS.gene41007.t1 MTR_8g088470 52.227 494 212 6 11 489 7 491 0.0 525
MS.gene41007.t1 MTR_7g033570 52.218 496 214 6 10 491 10 496 0.0 522
MS.gene41007.t1 MTR_6g004670 49.156 474 222 5 32 489 35 505 4.51e-160 464
MS.gene41007.t1 MTR_6g004600 46.640 506 239 6 13 491 16 517 7.44e-159 461
MS.gene41007.t1 MTR_6g004630 47.638 508 240 9 2 491 6 505 1.00e-158 460
MS.gene41007.t1 MTR_6g004590 44.595 518 256 6 1 491 4 517 5.36e-156 454
MS.gene41007.t1 MTR_6g004610 48.069 466 222 5 39 488 1 462 4.10e-151 440
MS.gene41007.t1 MTR_1g037560 40.994 483 256 10 33 490 66 544 3.71e-120 363
MS.gene41007.t1 MTR_4g075110 39.571 513 275 11 4 489 45 549 5.27e-119 360
MS.gene41007.t1 MTR_1g037550 40.452 487 257 10 33 490 66 548 2.42e-117 356
MS.gene41007.t1 MTR_4g012320 61.161 224 85 1 268 491 4 225 3.57e-99 298
MS.gene41007.t1 MTR_8g030590 35.211 497 280 10 25 489 24 510 4.17e-90 285
MS.gene41007.t1 MTR_8g098435 35.497 493 279 9 25 489 24 505 1.10e-88 281
MS.gene41007.t1 MTR_5g070010 33.988 509 283 11 16 489 18 508 1.97e-87 277
MS.gene41007.t1 MTR_3g463060 33.814 485 279 11 30 489 35 502 7.43e-80 258
MS.gene41007.t1 MTR_8g035820 34.583 480 277 12 35 489 42 509 1.43e-76 249
MS.gene41007.t1 MTR_8g035860 34.298 484 281 12 31 489 38 509 2.21e-76 248
MS.gene41007.t1 MTR_8g035810 33.196 485 286 12 31 489 38 510 4.04e-75 245
MS.gene41007.t1 MTR_7g088330 32.213 506 298 11 13 489 19 508 3.85e-74 243
MS.gene41007.t1 MTR_1g070365 34.774 486 269 13 31 489 40 504 9.70e-74 241
MS.gene41007.t1 MTR_1g070345 33.060 487 278 14 31 490 40 505 8.20e-73 239
MS.gene41007.t1 MTR_8g035780 34.694 441 253 10 76 490 80 511 3.70e-72 238
MS.gene41007.t1 MTR_7g096340 33.853 449 237 13 75 490 82 503 6.67e-72 237
MS.gene41007.t1 MTR_3g080580 31.800 500 282 12 30 490 39 518 1.15e-71 237
MS.gene41007.t1 MTR_1g050590 88.793 116 13 0 237 352 3 118 8.71e-70 218
MS.gene41007.t1 MTR_7g029275 31.622 487 289 15 30 489 39 508 1.25e-69 231
MS.gene41007.t1 MTR_7g096320 33.790 438 252 14 75 490 83 504 1.88e-68 228
MS.gene41007.t1 MTR_4g119660 29.795 537 303 14 7 490 1 516 7.32e-68 226
MS.gene41007.t1 MTR_5g019140 30.168 537 301 15 7 490 16 531 2.85e-67 225
MS.gene41007.t1 MTR_4g054920 32.063 446 245 12 80 489 93 516 3.35e-66 222
MS.gene41007.t1 MTR_8g035760 30.898 479 291 12 35 489 49 511 3.03e-65 219
MS.gene41007.t1 MTR_1g102220 31.056 483 286 14 35 489 43 506 2.14e-64 217
MS.gene41007.t1 MTR_8g035680 29.350 477 302 11 35 489 49 512 1.77e-63 215
MS.gene41007.t1 MTR_7g406990 37.110 353 196 9 33 364 49 396 1.27e-62 211
MS.gene41007.t1 MTR_2g086040 32.265 437 241 13 80 489 90 498 4.57e-62 211
MS.gene41007.t1 MTR_1g060550 31.343 402 246 10 78 462 93 481 1.77e-58 201
MS.gene41007.t1 MTR_8g035810 32.093 430 249 12 31 432 38 452 1.82e-58 200
MS.gene41007.t1 MTR_6g084040 58.140 172 63 4 1 170 1 165 4.63e-58 190
MS.gene41007.t1 MTR_8g035680 30.563 373 242 7 125 489 2 365 3.90e-55 189
MS.gene41007.t1 MTR_1g040110 71.304 115 31 1 111 223 53 167 1.91e-52 175
MS.gene41007.t1 MTR_1g036140 81.818 99 18 0 239 337 69 167 1.38e-48 165
MS.gene41007.t1 MTR_1g036140 82.353 68 12 0 1 68 1 68 7.19e-34 125
MS.gene41007.t1 MTR_1g102210 30.347 346 195 9 155 489 51 361 3.55e-40 149
MS.gene41007.t1 MTR_8g035810 30.278 360 209 11 31 362 38 383 5.65e-39 146
MS.gene41007.t1 MTR_1g070370 36.078 255 143 5 156 407 5 242 6.01e-39 142
MS.gene41007.t1 MTR_7g079440 25.828 453 290 16 61 489 218 648 1.74e-29 122
MS.gene41007.t1 MTR_1g035660 54.867 113 35 3 148 260 21 117 8.64e-29 111
MS.gene41007.t1 MTR_3g093530 25.072 347 237 10 145 488 197 523 1.81e-24 107
MS.gene41007.t1 MTR_1g085680 24.270 445 274 16 71 484 99 511 3.36e-23 103
MS.gene41007.t1 MTR_5g009110 23.045 486 303 16 60 490 102 571 6.61e-23 102
MS.gene41007.t1 MTR_1g101040 25.150 334 230 7 154 486 198 512 7.73e-23 102
MS.gene41007.t1 MTR_1g062190 22.126 461 304 16 58 489 105 539 7.89e-22 99.0
MS.gene41007.t1 MTR_6g072490 25.298 336 227 9 154 486 196 510 1.30e-21 98.2
MS.gene41007.t1 MTR_8g035790 46.465 99 51 2 393 490 1 98 1.33e-21 89.7
MS.gene41007.t1 MTR_1g101050 27.106 273 182 7 219 486 248 508 1.87e-20 94.7
MS.gene41007.t1 MTR_2g010320 26.331 357 242 12 144 489 157 503 2.53e-20 94.4
MS.gene41007.t1 MTR_5g009110 24.332 374 233 14 154 490 63 423 3.34e-20 93.2
MS.gene41007.t1 MTR_6g008500 25.703 249 173 7 219 460 258 501 3.64e-20 94.0
MS.gene41007.t1 MTR_0181s0030 25.261 479 309 17 9 462 16 470 3.90e-20 93.6
MS.gene41007.t1 MTR_8g012585 26.953 256 174 6 220 468 177 426 5.91e-20 92.8
MS.gene41007.t1 MTR_2g062670 32.796 186 95 5 155 330 67 232 6.65e-20 92.8
MS.gene41007.t1 MTR_2g062670 33.146 178 66 6 155 330 283 409 1.05e-16 82.8
MS.gene41007.t1 MTR_6g017325 25.483 259 180 6 227 484 256 502 8.76e-20 92.4
MS.gene41007.t1 MTR_8g046580 45.161 93 50 1 372 464 201 292 2.40e-19 89.0
MS.gene41007.t1 MTR_8g098565 29.902 204 136 4 292 489 304 506 2.83e-19 90.9
MS.gene41007.t1 MTR_2g023680 24.294 354 229 8 149 488 189 517 1.10e-18 89.4
MS.gene41007.t1 MTR_1g015860 23.985 542 327 23 3 490 19 529 1.13e-18 89.4
MS.gene41007.t1 MTR_6g008530 24.590 244 172 4 224 460 257 495 1.19e-18 89.4
MS.gene41007.t1 MTR_7g006900 22.102 371 252 10 120 484 128 467 1.24e-18 89.0
MS.gene41007.t1 MTR_4g018800 25.472 318 212 11 155 460 187 491 1.28e-18 89.0
MS.gene41007.t1 MTR_6g008430 26.378 254 177 6 219 468 245 492 1.30e-18 89.0
MS.gene41007.t1 MTR_0025s0110 22.321 448 303 15 59 486 101 523 1.32e-18 89.0
MS.gene41007.t1 MTR_6g008620 24.051 316 217 10 155 460 189 491 1.34e-18 89.0
MS.gene41007.t1 MTR_6g042540 25.391 256 181 7 219 468 241 492 1.56e-18 89.0
MS.gene41007.t1 MTR_2g010250 31.429 210 138 5 285 489 297 505 1.85e-18 88.6
MS.gene41007.t1 MTR_4g104610 21.545 492 322 15 3 459 4 466 2.25e-18 88.2
MS.gene41007.t1 MTR_4g104540 24.044 366 226 13 132 479 88 419 2.64e-18 87.4
MS.gene41007.t1 MTR_6g008650 27.138 269 180 8 217 476 246 507 2.83e-18 88.2
MS.gene41007.t1 MTR_2g010380 26.247 381 254 13 120 489 145 509 3.40e-18 87.8
MS.gene41007.t1 MTR_6g008640 25.595 336 225 9 153 476 183 505 6.29e-18 87.0
MS.gene41007.t1 MTR_3g014880 25.869 259 177 8 219 468 248 500 7.13e-18 86.7
MS.gene41007.t1 MTR_0147s0030 21.765 340 240 8 153 488 213 530 8.27e-18 86.7
MS.gene41007.t1 MTR_8g042000 25.648 347 218 12 149 481 196 516 1.46e-17 85.9
MS.gene41007.t1 MTR_6g022450 25.220 341 231 10 153 488 177 498 1.95e-17 85.5
MS.gene41007.t1 MTR_6g008600 24.188 277 174 6 212 460 225 493 2.12e-17 85.5
MS.gene41007.t1 MTR_5g070690 26.230 244 165 4 224 459 231 467 2.23e-17 85.1
MS.gene41007.t1 MTR_5g070800 26.230 244 165 4 224 459 231 467 2.23e-17 85.1
MS.gene41007.t1 MTR_4g071710 28.244 262 162 8 224 465 229 484 2.57e-17 85.1
MS.gene41007.t1 MTR_4g088400 26.984 252 175 5 219 468 250 494 3.14e-17 84.7
MS.gene41007.t1 MTR_0171s0020 25.391 256 178 5 214 462 227 476 3.37e-17 84.7
MS.gene41007.t1 MTR_2g010330 30.631 222 137 7 280 489 291 507 5.18e-17 84.0
MS.gene41007.t1 MTR_4g088425 28.571 252 172 5 219 468 233 478 5.40e-17 84.0
MS.gene41007.t1 MTR_2g010290 30.000 210 141 5 285 489 324 532 5.72e-17 84.0
MS.gene41007.t1 MTR_8g042020 24.306 288 178 9 221 488 255 522 6.30e-17 84.0
MS.gene41007.t1 MTR_2g072270 24.586 362 214 12 147 484 192 518 6.77e-17 83.6
MS.gene41007.t1 MTR_5g034900 27.861 201 140 4 292 489 319 517 7.91e-17 83.6
MS.gene41007.t1 MTR_8g012590 24.503 302 210 8 192 488 199 487 1.09e-16 83.2
MS.gene41007.t1 MTR_1g023730 25.000 348 226 12 138 465 150 482 1.17e-16 82.8
MS.gene41007.t1 MTR_5g070920 24.206 252 171 6 220 459 225 468 1.28e-16 82.8
MS.gene41007.t1 MTR_0171s0030 26.523 279 188 7 214 482 139 410 1.39e-16 82.0
MS.gene41007.t1 MTR_6g042610 25.292 257 181 7 219 468 241 493 1.43e-16 82.8
MS.gene41007.t1 MTR_5g021390 22.642 477 323 16 13 465 30 484 2.31e-16 82.0
MS.gene41007.t1 MTR_5g070830 24.901 253 167 6 220 458 335 578 2.98e-16 82.0
MS.gene41007.t1 MTR_8g008530 22.159 352 237 11 146 488 195 518 4.24e-16 81.3
MS.gene41007.t1 MTR_8g042060 24.294 354 228 11 149 488 196 523 6.40e-16 80.5
MS.gene41007.t1 MTR_1g022040 21.088 441 286 13 70 484 94 498 9.10e-16 80.1
MS.gene41007.t1 MTR_4g094775 22.318 466 302 16 30 468 35 467 9.46e-16 80.1
MS.gene41007.t1 MTR_7g087520 25.472 318 202 13 155 454 174 474 9.74e-16 80.1
MS.gene41007.t1 MTR_2g061200 23.367 398 248 13 118 488 161 528 9.81e-16 80.1
MS.gene41007.t1 MTR_4g088420 30.102 196 130 4 275 468 16 206 1.23e-15 76.6
MS.gene41007.t1 MTR_4g113650 27.919 197 136 4 288 484 324 514 1.40e-15 79.7
MS.gene41007.t1 MTR_2g010280 30.476 210 140 5 285 489 295 503 1.70e-15 79.3
MS.gene41007.t1 MTR_4g089025 24.507 355 228 10 152 488 185 517 1.72e-15 79.3
MS.gene41007.t1 MTR_7g075610 25.852 352 220 13 131 465 147 474 1.86e-15 79.3
MS.gene41007.t1 MTR_8g076290 26.403 303 192 13 151 439 165 450 1.91e-15 79.3
MS.gene41007.t1 MTR_8g042060 24.128 344 221 11 159 488 170 487 1.97e-15 79.0
MS.gene41007.t1 MTR_1g069200 24.265 272 192 5 219 486 248 509 2.67e-15 78.6
MS.gene41007.t1 MTR_3g436540 25.856 263 177 7 209 465 230 480 3.39e-15 78.6
MS.gene41007.t1 MTR_7g055793 20.882 340 243 8 153 488 151 468 4.21e-15 77.8
MS.gene41007.t1 MTR_1g091003 27.313 227 146 7 236 458 248 459 4.32e-15 77.8
MS.gene41007.t1 MTR_2g055430 22.767 347 235 10 153 488 193 517 4.51e-15 78.2
MS.gene41007.t1 MTR_7g055793 20.882 340 243 8 153 488 206 523 4.60e-15 78.2
MS.gene41007.t1 MTR_4g089020 24.000 375 246 11 131 488 140 492 5.55e-15 77.8
MS.gene41007.t1 MTR_5g070700 25.090 279 183 8 220 484 225 491 5.61e-15 77.8
MS.gene41007.t1 MTR_8g104030 27.200 250 154 7 224 458 8 244 6.42e-15 75.5
MS.gene41007.t1 MTR_5g070710 22.984 248 178 3 220 459 224 466 8.30e-15 77.0
MS.gene41007.t1 MTR_4g089055 22.998 487 311 17 13 465 30 486 8.34e-15 77.0
MS.gene41007.t1 MTR_8g469360 22.287 341 237 9 153 488 106 423 1.10e-14 76.3
MS.gene41007.t1 MTR_0022s0290 24.416 385 248 12 89 458 124 480 1.46e-14 76.3
MS.gene41007.t1 MTR_4g104660 24.348 345 233 12 129 464 158 483 1.47e-14 76.3
MS.gene41007.t1 MTR_5g009110 23.121 346 226 10 60 379 102 433 1.66e-14 75.9
MS.gene41007.t1 MTR_2g055470 23.631 347 230 11 154 488 194 517 1.78e-14 76.3
MS.gene41007.t1 MTR_3g076530 23.248 314 210 10 155 458 175 467 2.57e-14 75.5
MS.gene41007.t1 MTR_1g091023 25.571 219 145 6 248 462 259 463 2.61e-14 75.5
MS.gene41007.t1 MTR_4g095050 25.150 334 216 11 153 472 171 484 3.29e-14 75.1
MS.gene41007.t1 MTR_7g098550 23.356 441 291 13 61 484 90 500 3.48e-14 75.1
MS.gene41007.t1 MTR_7g103450 26.721 247 165 7 219 458 244 481 3.68e-14 75.1
MS.gene41007.t1 MTR_3g436390 27.046 281 186 11 220 491 231 501 3.93e-14 75.1
MS.gene41007.t1 MTR_6g084090 75.000 40 10 0 269 308 11 50 5.29e-14 66.6
MS.gene41007.t1 MTR_7g098550 22.573 443 284 13 61 484 90 492 6.29e-14 74.3
MS.gene41007.t1 MTR_5g070850 23.887 247 173 5 224 462 233 472 6.61e-14 74.3
MS.gene41007.t1 MTR_1g091010 25.581 215 142 6 248 458 258 458 9.29e-14 73.9
MS.gene41007.t1 MTR_4g104570 27.273 198 127 5 289 479 1 188 9.37e-14 70.5
MS.gene41007.t1 MTR_5g091760 25.352 213 150 5 231 443 229 432 9.88e-14 73.6
MS.gene41007.t1 MTR_6g084770 25.610 246 165 7 224 459 233 470 1.06e-13 73.6
MS.gene41007.t1 MTR_6g084900 23.333 240 165 4 229 458 1 231 1.38e-13 71.2
MS.gene41007.t1 MTR_7g079440 25.090 279 182 9 61 322 218 486 1.63e-13 73.2
MS.gene41007.t1 MTR_8g036185 25.229 218 148 4 256 464 277 488 1.91e-13 72.8
MS.gene41007.t1 MTR_2g072340 24.225 355 228 13 149 488 187 515 2.25e-13 72.8
MS.gene41007.t1 MTR_5g073250 22.807 285 198 8 216 489 228 501 2.63e-13 72.4
MS.gene41007.t1 MTR_5g070840 30.070 143 95 2 319 459 1 140 3.33e-13 68.2
MS.gene41007.t1 MTR_2g450040 20.276 508 348 20 6 476 11 498 4.22e-13 72.0
MS.gene41007.t1 MTR_3g024520 24.507 355 229 16 129 465 144 477 5.04e-13 71.6
MS.gene41007.t1 MTR_2g061750 26.804 194 105 6 70 234 9 194 5.43e-13 68.2
MS.gene41007.t1 MTR_4g109470 26.693 251 152 9 219 454 230 463 5.89e-13 71.2
MS.gene41007.t1 MTR_2g061740 26.882 186 101 5 78 234 15 194 6.21e-13 68.2
MS.gene41007.t1 MTR_6g035115 24.855 346 210 15 129 458 150 461 8.33e-13 70.9
MS.gene41007.t1 MTR_2g437840 25.806 248 163 8 219 463 233 462 1.24e-12 70.5
MS.gene41007.t1 MTR_5g094550 22.581 279 196 8 196 465 204 471 1.32e-12 70.1
MS.gene41007.t1 MTR_2g072250 23.757 362 221 12 149 488 185 513 1.52e-12 70.1
MS.gene41007.t1 MTR_6g084060 70.270 37 11 0 57 93 17 53 1.77e-12 62.4
MS.gene41007.t1 MTR_4g077210 26.432 227 155 8 219 443 235 451 1.88e-12 69.7
MS.gene41007.t1 MTR_5g094660 19.688 320 230 7 152 465 172 470 1.95e-12 69.7
MS.gene41007.t1 MTR_2g072400 22.792 351 238 12 149 488 187 515 2.04e-12 69.7
MS.gene41007.t1 MTR_5g016440 26.389 288 187 13 209 491 222 489 2.94e-12 68.9
MS.gene41007.t1 MTR_5g073320 23.137 255 180 6 216 465 229 472 2.97e-12 69.3
MS.gene41007.t1 MTR_1g031700 22.189 338 231 10 130 458 147 461 3.21e-12 68.9
MS.gene41007.t1 MTR_4g048580 23.292 322 217 8 149 462 169 468 4.37e-12 68.6
MS.gene41007.t1 MTR_8g104100 27.461 193 120 5 277 462 50 229 4.48e-12 67.0
MS.gene41007.t1 MTR_3g025230 25.228 329 208 15 155 465 169 477 5.50e-12 68.2
MS.gene41007.t1 MTR_8g466180 24.113 282 198 7 194 465 197 472 5.55e-12 68.2
MS.gene41007.t1 MTR_4g062500 22.043 372 251 12 118 466 129 484 8.47e-12 67.8
MS.gene41007.t1 MTR_2g073480 23.932 234 160 6 236 465 165 384 9.68e-12 67.0
MS.gene41007.t1 MTR_4g088405 30.769 195 129 3 275 468 219 408 1.17e-11 67.0
MS.gene41007.t1 MTR_5g009110 24.786 234 157 7 154 379 63 285 1.17e-11 66.2
MS.gene41007.t1 MTR_5g016410 23.932 351 227 13 153 485 168 496 1.34e-11 67.0
MS.gene41007.t1 MTR_2g073440 23.932 234 160 6 236 465 232 451 1.41e-11 67.0
MS.gene41007.t1 MTR_2g072260 21.127 355 239 10 149 488 182 510 1.50e-11 67.0
MS.gene41007.t1 MTR_3g467220 25.926 243 162 7 224 458 255 487 1.64e-11 67.0
MS.gene41007.t1 MTR_7g056103 21.564 473 302 18 31 465 38 479 1.80e-11 66.6
MS.gene41007.t1 MTR_5g007460 23.280 189 139 3 274 462 262 444 1.89e-11 66.6
MS.gene41007.t1 MTR_1g023720 23.547 344 236 9 138 465 150 482 2.03e-11 66.6
MS.gene41007.t1 MTR_3g076550 23.792 269 172 6 220 482 231 472 2.23e-11 66.2
MS.gene41007.t1 MTR_4g094772 21.739 483 308 17 14 468 18 458 2.55e-11 66.2
MS.gene41007.t1 MTR_3g057910 23.016 252 178 6 223 466 232 475 3.38e-11 65.9
MS.gene41007.t1 MTR_4g088195 18.868 371 249 11 115 466 141 478 3.88e-11 65.9
MS.gene41007.t1 MTR_3g057980 23.410 346 223 16 129 462 149 464 5.97e-11 65.1
MS.gene41007.t1 MTR_5g007450 22.439 205 152 4 261 465 271 468 6.43e-11 65.1
MS.gene41007.t1 MTR_8g468780 22.311 251 171 7 224 462 168 406 6.68e-11 64.7
MS.gene41007.t1 MTR_5g019010 23.790 248 166 8 224 459 232 468 6.79e-11 64.7
MS.gene41007.t1 MTR_6g004570 34.906 106 56 4 229 321 1 106 6.95e-11 63.2
MS.gene41007.t1 MTR_3g058000 22.054 331 224 12 148 465 167 476 8.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41007.t1 AT4G32170 42.857 511 264 7 1 490 1 504 6.08e-141 415
MS.gene41007.t1 AT4G39500 42.105 513 266 6 2 490 12 517 3.11e-140 414
MS.gene41007.t1 AT4G39490 40.313 511 272 6 11 491 11 518 4.22e-135 400
MS.gene41007.t1 AT2G23180 40.891 516 274 6 1 489 1 512 1.20e-134 399
MS.gene41007.t1 AT4G39500 42.616 474 243 5 39 490 1 467 1.23e-132 392
MS.gene41007.t1 AT2G21910 41.020 490 261 6 24 491 25 508 1.06e-130 389
MS.gene41007.t1 AT1G47620 39.272 522 279 7 1 490 1 516 6.62e-128 382
MS.gene41007.t1 AT1G57750 38.235 510 282 6 1 490 1 497 1.20e-127 380
MS.gene41007.t1 AT4G39480 41.473 516 273 7 1 491 4 515 6.84e-126 377
MS.gene41007.t1 AT4G39510 38.477 512 284 7 1 490 4 506 8.26e-122 366
MS.gene41007.t1 AT5G02900 40.079 504 264 10 1 490 1 480 2.07e-118 356
MS.gene41007.t1 AT1G65340 38.994 477 260 5 33 488 36 502 3.74e-118 356
MS.gene41007.t1 AT5G52320 39.331 478 258 6 32 488 35 501 9.85e-116 350
MS.gene41007.t1 AT5G08250 37.597 516 284 12 4 491 37 542 2.92e-115 350
MS.gene41007.t1 AT5G52320 38.901 473 257 6 32 483 35 496 4.16e-113 343
MS.gene41007.t1 AT5G23190 37.037 513 292 11 4 491 36 542 4.84e-112 342
MS.gene41007.t1 AT5G08250 38.272 486 263 11 34 491 4 480 2.03e-110 336
MS.gene41007.t1 AT1G24540 36.439 483 280 6 30 489 42 520 4.79e-103 318
MS.gene41007.t1 AT4G00360 35.547 512 289 10 10 489 9 511 8.29e-97 303
MS.gene41007.t1 AT3G26125 34.476 496 283 8 31 491 46 534 2.28e-96 301
MS.gene41007.t1 AT1G63710 35.478 513 289 12 8 489 6 507 1.01e-94 296
MS.gene41007.t1 AT2G45970 35.569 492 275 10 30 489 29 510 3.19e-94 296
MS.gene41007.t1 AT1G57750 35.240 437 250 6 1 417 1 424 6.16e-94 292
MS.gene41007.t1 AT1G01600 34.638 511 297 10 10 489 9 513 1.98e-93 294
MS.gene41007.t1 AT1G13140 31.915 517 312 10 6 491 19 526 2.15e-88 281
MS.gene41007.t1 AT1G13150 32.665 499 282 11 30 491 38 519 1.81e-86 275
MS.gene41007.t1 AT1G13140 32.227 512 291 12 6 491 19 500 5.70e-84 268
MS.gene41007.t1 AT3G56630 34.739 498 272 14 23 489 23 498 1.86e-81 261
MS.gene41007.t1 AT5G58860 32.941 510 303 9 8 489 10 508 9.15e-80 258
MS.gene41007.t1 AT1G34540 32.549 510 300 13 11 489 1 497 2.04e-79 256
MS.gene41007.t1 AT2G45510 33.206 524 299 14 1 489 1 508 2.62e-79 256
MS.gene41007.t1 AT2G44890 33.594 512 293 15 1 482 7 501 3.67e-76 248
MS.gene41007.t1 AT3G48520 30.561 517 294 15 10 490 13 500 1.24e-72 239
MS.gene41007.t1 AT2G44890 32.681 511 281 15 1 482 7 483 4.06e-71 234
MS.gene41007.t1 AT5G63450 33.180 434 253 10 78 489 84 502 1.65e-70 233
MS.gene41007.t1 AT5G63450 30.891 505 311 11 7 489 72 560 7.14e-70 233
MS.gene41007.t1 AT2G27690 33.333 426 245 11 80 486 78 483 3.58e-69 229
MS.gene41007.t1 AT1G69500 29.685 539 315 15 1 490 1 524 2.24e-66 223
MS.gene41007.t1 AT3G01900 30.579 484 288 15 30 489 31 490 6.85e-61 207
MS.gene41007.t1 AT5G51900 29.866 298 139 8 205 490 1 240 1.26e-30 119
MS.gene41007.t1 AT1G31800 25.164 457 290 16 61 490 139 570 1.65e-28 119
MS.gene41007.t1 AT3G53130 22.876 459 303 17 58 489 105 539 3.07e-24 106
MS.gene41007.t1 AT3G25180 26.298 289 183 6 188 468 217 483 2.29e-21 97.4
MS.gene41007.t1 AT5G52400 27.715 267 173 6 221 482 261 512 3.64e-21 97.1
MS.gene41007.t1 AT4G13310 25.407 307 212 8 155 459 171 462 4.35e-20 93.6
MS.gene41007.t1 AT4G31950 25.969 258 176 6 220 468 231 482 1.13e-19 92.4
MS.gene41007.t1 AT3G48270 22.517 453 293 15 30 458 34 452 2.88e-19 90.9
MS.gene41007.t1 AT3G48300 24.556 338 223 10 155 484 164 477 3.92e-19 90.5
MS.gene41007.t1 AT3G48300 24.556 338 223 10 155 484 166 479 3.96e-19 90.5
MS.gene41007.t1 AT3G61040 30.806 211 138 5 250 458 256 460 5.01e-19 90.1
MS.gene41007.t1 AT5G24900 21.902 347 242 9 150 487 82 408 9.56e-19 88.6
MS.gene41007.t1 AT1G64940 28.800 250 164 7 250 489 263 508 9.89e-19 89.4
MS.gene41007.t1 AT5G24900 21.902 347 242 9 150 487 199 525 1.15e-18 89.4
MS.gene41007.t1 AT2G26710 25.676 444 286 15 59 484 93 510 1.20e-18 89.4
MS.gene41007.t1 AT4G31940 23.307 502 326 16 10 468 9 494 1.26e-18 89.0
MS.gene41007.t1 AT1G64950 27.037 270 179 6 223 489 253 507 2.06e-18 88.6
MS.gene41007.t1 AT4G27710 24.123 456 283 17 58 484 91 512 2.13e-18 88.6
MS.gene41007.t1 AT2G24180 24.874 398 278 12 91 482 109 491 2.22e-18 88.2
MS.gene41007.t1 AT4G15110 21.150 487 312 16 60 490 109 579 2.28e-18 88.6
MS.gene41007.t1 AT3G14680 22.881 472 284 16 53 488 84 511 2.84e-18 87.8
MS.gene41007.t1 AT4G13770 22.316 354 246 8 120 465 138 470 3.65e-18 87.4
MS.gene41007.t1 AT5G24910 23.897 272 184 9 228 489 274 532 3.78e-18 87.8
MS.gene41007.t1 AT3G14640 23.362 458 287 18 53 481 106 528 4.26e-18 87.4
MS.gene41007.t1 AT3G14640 23.362 458 287 18 53 481 84 506 4.28e-18 87.4
MS.gene41007.t1 AT4G31970 26.154 260 173 9 220 468 242 493 3.35e-17 84.7
MS.gene41007.t1 AT2G45580 25.145 346 232 10 130 465 151 479 3.45e-17 84.7
MS.gene41007.t1 AT3G26830 25.676 370 241 16 102 455 107 458 4.84e-17 84.0
MS.gene41007.t1 AT3G26330 24.551 334 221 10 144 465 154 468 6.27e-17 84.0
MS.gene41007.t1 AT2G45580 25.220 341 228 10 135 465 2 325 1.02e-16 82.0
MS.gene41007.t1 AT5G06900 23.643 258 178 5 210 462 222 465 1.07e-16 83.2
MS.gene41007.t1 AT1G01280 22.705 414 277 17 74 458 73 472 1.11e-16 83.2
MS.gene41007.t1 AT4G13290 23.932 351 222 11 118 459 141 455 1.62e-16 82.4
MS.gene41007.t1 AT1G13100 21.798 367 262 10 102 455 104 458 3.00e-16 81.6
MS.gene41007.t1 AT2G46960 22.881 472 271 17 58 484 89 512 4.36e-16 81.3
MS.gene41007.t1 AT2G12190 26.103 272 181 7 223 489 253 509 4.93e-16 80.9
MS.gene41007.t1 AT2G30770 24.701 251 174 5 220 465 227 467 5.74e-16 80.9
MS.gene41007.t1 AT1G33730 26.023 342 225 9 133 465 20 342 5.75e-16 79.7
MS.gene41007.t1 AT1G33730 26.023 342 225 9 133 465 20 342 5.75e-16 79.7
MS.gene41007.t1 AT2G42250 23.853 327 225 9 152 468 175 487 2.00e-15 79.3
MS.gene41007.t1 AT3G48280 22.380 353 229 13 123 464 140 458 2.20e-15 79.0
MS.gene41007.t1 AT2G46950 24.583 240 159 6 255 484 338 565 2.32e-15 79.0
MS.gene41007.t1 AT3G20940 26.250 240 155 7 240 469 259 486 2.32e-15 79.0
MS.gene41007.t1 AT4G15350 24.101 278 187 8 226 491 239 504 2.75e-15 78.6
MS.gene41007.t1 AT3G20140 23.582 335 234 9 155 483 180 498 3.89e-15 78.2
MS.gene41007.t1 AT1G66030 28.994 169 91 3 1 147 1 162 5.26e-15 73.2
MS.gene41007.t1 AT1G64930 27.103 214 144 5 284 489 299 508 5.82e-15 77.8
MS.gene41007.t1 AT2G46960 23.944 355 200 12 156 484 86 396 8.75e-15 76.6
MS.gene41007.t1 AT3G14630 25.360 347 218 12 148 481 182 500 1.42e-14 76.6
MS.gene41007.t1 AT3G14630 25.360 347 218 12 148 481 237 555 1.70e-14 76.3
MS.gene41007.t1 AT4G39950 20.322 497 343 13 3 464 26 504 2.27e-14 75.9
MS.gene41007.t1 AT5G35715 24.691 324 218 9 126 439 74 381 2.28e-14 75.5
MS.gene41007.t1 AT3G14690 21.983 464 290 17 57 488 88 511 2.33e-14 75.9
MS.gene41007.t1 AT3G14690 21.983 464 290 17 57 488 123 546 2.60e-14 75.9
MS.gene41007.t1 AT1G50560 20.879 364 259 10 131 483 160 505 2.70e-14 75.5
MS.gene41007.t1 AT4G39950 20.281 498 344 13 3 465 66 545 2.89e-14 75.9
MS.gene41007.t1 AT3G14620 23.810 336 236 8 148 481 190 507 3.20e-14 75.5
MS.gene41007.t1 AT2G22330 23.868 243 176 6 224 463 269 505 7.66e-14 74.3
MS.gene41007.t1 AT2G22330 23.868 243 176 6 224 463 292 528 9.27e-14 73.9
MS.gene41007.t1 AT1G13710 24.126 286 187 10 219 491 246 514 1.29e-13 73.6
MS.gene41007.t1 AT1G01190 26.106 226 151 7 273 489 318 536 1.75e-13 73.2
MS.gene41007.t1 AT1G74110 23.860 285 192 8 219 489 263 536 1.90e-13 73.2
MS.gene41007.t1 AT1G01190 26.106 226 151 7 273 489 313 531 1.90e-13 73.2
MS.gene41007.t1 AT5G25120 22.792 351 236 10 129 468 141 467 1.96e-13 72.8
MS.gene41007.t1 AT5G38450 22.701 348 234 9 147 484 189 511 2.17e-13 72.8
MS.gene41007.t1 AT5G24950 26.389 216 136 6 255 459 258 461 3.67e-13 72.0
MS.gene41007.t1 AT3G20130 23.970 267 169 9 240 489 259 508 4.01e-13 72.0
MS.gene41007.t1 AT1G67110 25.180 278 176 7 219 484 248 505 4.20e-13 72.0
MS.gene41007.t1 AT4G20240 26.531 294 186 11 123 410 143 412 4.53e-13 71.6
MS.gene41007.t1 AT3G20130 23.970 267 169 9 240 489 231 480 5.59e-13 71.2
MS.gene41007.t1 AT3G61880 24.537 216 147 7 249 459 292 496 5.93e-13 71.6
MS.gene41007.t1 AT1G64900 27.381 252 168 7 250 490 258 505 6.86e-13 71.2
MS.gene41007.t1 AT3G61880 24.537 216 147 7 249 459 292 496 7.34e-13 71.2
MS.gene41007.t1 AT3G20100 23.102 303 202 10 155 445 179 462 9.32e-13 70.9
MS.gene41007.t1 AT1G33720 25.648 347 220 13 133 465 156 478 1.07e-12 70.5
MS.gene41007.t1 AT2G46660 23.504 234 167 6 262 489 301 528 1.07e-12 70.5
MS.gene41007.t1 AT1G33720 25.648 347 220 13 133 465 24 346 1.21e-12 69.7
MS.gene41007.t1 AT1G33720 25.648 347 220 13 133 465 24 346 1.21e-12 69.7
MS.gene41007.t1 AT1G33720 25.648 347 220 13 133 465 24 346 1.21e-12 69.7
MS.gene41007.t1 AT3G03470 23.704 270 193 6 231 489 242 509 1.34e-12 70.5
MS.gene41007.t1 AT3G20950 24.091 220 147 6 237 447 260 468 1.70e-12 70.1
MS.gene41007.t1 AT3G26180 24.597 248 171 7 224 465 235 472 1.83e-12 69.7
MS.gene41007.t1 AT1G28430 26.415 265 170 8 240 491 257 509 2.04e-12 69.7
MS.gene41007.t1 AT2G45560 27.059 255 158 7 219 465 244 478 2.35e-12 69.7
MS.gene41007.t1 AT3G26290 25.225 333 221 11 145 468 171 484 2.35e-12 69.7
MS.gene41007.t1 AT3G26290 25.225 333 221 11 145 468 158 471 2.59e-12 69.3
MS.gene41007.t1 AT4G37400 22.874 341 244 7 129 468 144 466 4.00e-12 68.9
MS.gene41007.t1 AT4G12320 22.222 270 189 5 224 482 244 503 4.94e-12 68.6
MS.gene41007.t1 AT4G12310 24.815 270 182 7 224 482 246 505 6.28e-12 68.2
MS.gene41007.t1 AT5G09970 25.100 251 167 9 250 488 293 534 7.00e-12 68.2
MS.gene41007.t1 AT2G45570 27.273 253 164 7 218 465 242 479 7.71e-12 67.8
MS.gene41007.t1 AT2G30750 24.206 252 174 6 220 465 227 467 7.75e-12 67.8
MS.gene41007.t1 AT1G13110 22.432 370 255 12 102 455 111 464 8.97e-12 67.8
MS.gene41007.t1 AT2G02580 24.149 323 217 9 155 468 168 471 1.28e-11 67.0
MS.gene41007.t1 AT4G31500 22.324 327 228 6 148 465 160 469 1.33e-11 67.0
MS.gene41007.t1 AT5G42590 22.222 261 188 5 208 465 219 467 1.34e-11 67.0
MS.gene41007.t1 AT5G42580 24.809 262 172 8 234 483 239 487 1.34e-11 67.0
MS.gene41007.t1 AT2G23190 23.269 361 238 13 110 458 166 499 1.34e-11 67.4
MS.gene41007.t1 AT1G50520 20.270 370 266 10 131 489 159 510 1.43e-11 67.0
MS.gene41007.t1 AT2G42850 23.636 220 158 5 228 447 233 442 2.44e-11 66.2
MS.gene41007.t1 AT2G23220 21.389 360 246 12 110 458 137 470 3.31e-11 65.9
MS.gene41007.t1 AT5G10610 26.840 231 142 8 268 481 260 480 3.45e-11 65.9
MS.gene41007.t1 AT1G66540 23.651 241 155 8 226 459 125 343 9.57e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATGATGTTTCAAAATTA+AGG 0.163703 1.3:+41126334 None:intergenic
CCAATTATTGGCCAATTAAT+TGG 0.189605 1.3:+41126407 None:intergenic
ATGAATTTGCACCAATTAAT+TGG 0.211901 1.3:-41126418 MS.gene41007:CDS
CTTAATGATGTATCTGAAAT+AGG 0.218560 1.3:-41126027 MS.gene41007:CDS
CCAATTAATTGGCCAATAAT+TGG 0.220322 1.3:-41126407 MS.gene41007:CDS
CACATCGCGAGCAAGAATTT+TGG 0.239888 1.3:-41126236 MS.gene41007:CDS
TGGGAAGGATGGAACAAATA+TGG 0.242158 1.3:-41125282 MS.gene41007:CDS
AAAGAAAGCTTTGGGGTTAC+AGG 0.244186 1.3:+41125061 None:intergenic
GGTTGTATGATCATGGAAAT+TGG 0.258893 1.3:+41126355 None:intergenic
GAGTACAGTAACCTTGTATT+TGG 0.262632 1.3:+41125316 None:intergenic
TCCTCCAATACATTGAATTA+TGG 0.285770 1.3:+41126493 None:intergenic
GCACTTGCTTTGCTCTTGTT+TGG 0.288326 1.3:+41125720 None:intergenic
CTTAGCTCATTAAACTTGTT+TGG 0.294588 1.3:+41125916 None:intergenic
CCCGGTAGCATACCAATTAT+TGG 0.296660 1.3:+41126395 None:intergenic
AGCATCTGCACTATTGCATT+TGG 0.313215 1.3:-41125958 MS.gene41007:CDS
AACTTGTTTGGAAGGCAATT+AGG 0.324390 1.3:+41125928 None:intergenic
TTCACAAACACAAGCTTTAT+CGG 0.335557 1.3:-41126284 MS.gene41007:CDS
ACCACCTTTATGTGAAAATT+CGG 0.340829 1.3:+41125094 None:intergenic
TCCTTACCCATACAACTTCT+AGG 0.358842 1.3:+41125160 None:intergenic
GAAGAACAAAAGAAAGCTTT+GGG 0.361228 1.3:+41125053 None:intergenic
TGGTCAAGAAAGGAAGTTAA+AGG 0.362304 1.3:-41125791 MS.gene41007:CDS
ACTTCATACCACGTTGTCTA+TGG 0.369347 1.3:-41125837 MS.gene41007:CDS
TTCAAGAAATCAAAGATAAC+TGG 0.377327 1.3:-41125504 MS.gene41007:CDS
GGGAAGGATGGAACAAATAT+GGG 0.382754 1.3:-41125281 MS.gene41007:CDS
TGAAGAACAAAAGAAAGCTT+TGG 0.395808 1.3:+41125052 None:intergenic
ATTATCACCTCATCTATAAC+AGG 0.399453 1.3:+41125868 None:intergenic
AAATTAAGGTTGTATGATCA+TGG 0.408212 1.3:+41126348 None:intergenic
TACAGGACCTAGAAGTTGTA+TGG 0.412532 1.3:-41125167 MS.gene41007:CDS
GGAGGAACATTTCGATTTGA+AGG 0.425306 1.3:-41126314 MS.gene41007:CDS
GTGCAGCAGCAGTGAAGAAA+TGG 0.426826 1.3:-41125701 MS.gene41007:CDS
ACTGTACTCTTTGTACGCTA+TGG 0.429627 1.3:-41125302 MS.gene41007:CDS
TAGATGAGGTGATAATTTAC+CGG 0.429693 1.3:-41125861 MS.gene41007:CDS
CTCTCCACTAGGTAGTATAT+CGG 0.434770 1.3:+41125348 None:intergenic
TCAGATACATCATTAAGAAA+TGG 0.437927 1.3:+41126033 None:intergenic
TCACATGAAACATGGCTTGA+AGG 0.439698 1.3:-41125032 MS.gene41007:CDS
GCCAATAATTGGTATGCTAC+CGG 0.446220 1.3:-41126396 MS.gene41007:CDS
ATGAAGGATGGATCTGGAAA+GGG 0.446337 1.3:-41125658 MS.gene41007:CDS
GAGCTCTATGTGAAGCCTTA+AGG 0.446428 1.3:-41125414 MS.gene41007:CDS
AGTGGATGTATAGGAAGATT+AGG 0.446657 1.3:+41126459 None:intergenic
ATGTCCATAATTCAATGTAT+TGG 0.452105 1.3:-41126497 MS.gene41007:CDS
GGAAATGGCACAATTAGTTC+AGG 0.453055 1.3:-41125583 MS.gene41007:CDS
CCAATAATTGGTATGCTACC+GGG 0.465531 1.3:-41126395 MS.gene41007:CDS
CTCTCTGATATCCAACTCTC+AGG 0.466300 1.3:+41125235 None:intergenic
GCTCATTAAACTTGTTTGGA+AGG 0.466990 1.3:+41125920 None:intergenic
GTCTGATTCTCCTCTTGTGT+GGG 0.467220 1.3:+41125481 None:intergenic
CATCATTAAGAAATGGTAGT+AGG 0.468567 1.3:+41126040 None:intergenic
CAATTAGTTCAGGTCTCAGT+TGG 0.469626 1.3:-41125573 MS.gene41007:CDS
ATGTTTCATTCATTTCCAAA+TGG 0.474058 1.3:-41126116 MS.gene41007:CDS
CATTTCGATTTGAAGGAGCT+TGG 0.479272 1.3:-41126307 MS.gene41007:CDS
ACCTAGAAGTTGTATGGGTA+AGG 0.489801 1.3:-41125161 MS.gene41007:CDS
AATAGGTGCTCAGGTGGACC+TGG 0.491109 1.3:-41126010 MS.gene41007:CDS
CTGTACTCTTTGTACGCTAT+GGG 0.491458 1.3:-41125301 MS.gene41007:CDS
CTCTATTGCGTCTCCAGTAG+TGG 0.492695 1.3:+41126441 None:intergenic
TCCATAATTCAATGTATTGG+AGG 0.496271 1.3:-41126494 MS.gene41007:CDS
GGCTCGACGTTGGTCAAGAA+AGG 0.502700 1.3:-41125801 MS.gene41007:CDS
TCTTCCTATACATCCACTAC+TGG 0.509021 1.3:-41126454 MS.gene41007:CDS
ATTGCACAGATATGCTCAAA+AGG 0.511230 1.3:+41125376 None:intergenic
ATCAACATTCATCGGATCAC+TGG 0.513726 1.3:+41126259 None:intergenic
GTCTCCAGTAGTGGATGTAT+AGG 0.523643 1.3:+41126450 None:intergenic
GCGCTGATGAAGGATGGATC+TGG 0.532339 1.3:-41125664 MS.gene41007:CDS
CAGATATGCTCAAAAGGTAC+AGG 0.535905 1.3:+41125382 None:intergenic
CAGCTTCATTCAAATGAAGA+TGG 0.538013 1.3:-41125134 MS.gene41007:CDS
AGTCTGATTCTCCTCTTGTG+TGG 0.538668 1.3:+41125480 None:intergenic
TACAGGAGGATAAAGCCTTA+AGG 0.545864 1.3:+41125399 None:intergenic
TCAGACTCCTTTGAGAGATG+TGG 0.551452 1.3:-41125464 MS.gene41007:CDS
GACAACGTGGTATGAAGTGC+CGG 0.552027 1.3:+41125842 None:intergenic
AAAGCAATGAACTTGTAAGA+TGG 0.552050 1.3:+41125193 None:intergenic
ATTTCTTCCTGTTATAGATG+AGG 0.553424 1.3:-41125875 MS.gene41007:CDS
GTAAAAGCGCTGATGAAGGA+TGG 0.553631 1.3:-41125670 MS.gene41007:CDS
ACCTACTCAAAGCATCCTCC+AGG 0.555304 1.3:+41125992 None:intergenic
GACAGGTGACGCAAAAGCCC+CGG 0.558091 1.3:+41126377 None:intergenic
TGTATCTGAAATAGGTGCTC+AGG 0.559444 1.3:-41126019 MS.gene41007:CDS
GAAGGATGGATCTGGAAAGG+GGG 0.561441 1.3:-41125656 MS.gene41007:CDS
TGGAATTTAAGCCTGAGAGT+TGG 0.567352 1.3:-41125246 MS.gene41007:CDS
TATGATCATGGAAATTGGAC+AGG 0.567855 1.3:+41126360 None:intergenic
ATCTGAAATAGGTGCTCAGG+TGG 0.576147 1.3:-41126016 MS.gene41007:CDS
TGAAGGATGGATCTGGAAAG+GGG 0.579401 1.3:-41125657 MS.gene41007:CDS
GATGTATAGGAAGATTAGGA+TGG 0.580348 1.3:+41126463 None:intergenic
AGGCTTCACATAGAGCTCCA+TGG 0.581799 1.3:+41125419 None:intergenic
TTTCACATAAAGGTGGTGGA+AGG 0.581931 1.3:-41125088 MS.gene41007:CDS
GATGAAGGATGGATCTGGAA+AGG 0.582676 1.3:-41125659 MS.gene41007:CDS
TTTGTACGCTATGGGAAGGA+TGG 0.588075 1.3:-41125293 MS.gene41007:CDS
TTTGTTCTTCACATGAAACA+TGG 0.588468 1.3:-41125040 MS.gene41007:CDS
CTTTGTAAAAGCGCTGATGA+AGG 0.591650 1.3:-41125674 MS.gene41007:CDS
ACAGGACCTAGAAGTTGTAT+GGG 0.597811 1.3:-41125166 MS.gene41007:CDS
AGATAACTGGCCCACACAAG+AGG 0.598238 1.3:-41125491 MS.gene41007:CDS
GCGATGTGATCAACATTCAT+CGG 0.603130 1.3:+41126251 None:intergenic
GGACTAACACGCTCTCCACT+AGG 0.603467 1.3:+41125337 None:intergenic
GATAAGCTAGTGTACCTCCA+TGG 0.604777 1.3:-41125436 MS.gene41007:CDS
TCAAGATCCACATCTCTCAA+AGG 0.613077 1.3:+41125457 None:intergenic
ACCTGGAGGATGCTTTGAGT+AGG 0.620857 1.3:-41125993 MS.gene41007:CDS
CAATAATTGGTATGCTACCG+GGG 0.625054 1.3:-41126394 MS.gene41007:CDS
AATATGGGGAGAAGACTGCA+TGG 0.631048 1.3:-41125266 MS.gene41007:CDS
GGAAGGATGGAACAAATATG+GGG 0.639334 1.3:-41125280 MS.gene41007:CDS
ATATGCTCAAAAGGTACAGG+AGG 0.642256 1.3:+41125385 None:intergenic
AGGTGCTCAGGTGGACCTGG+AGG 0.643711 1.3:-41126007 MS.gene41007:CDS
AGCGTGTTAGTCCAAATACA+AGG 0.645393 1.3:-41125327 MS.gene41007:CDS
GAGAGTTGGATATCAGAGAG+AGG 0.655674 1.3:-41125232 MS.gene41007:CDS
AAATCCGATATACTACCTAG+TGG 0.664104 1.3:-41125352 MS.gene41007:CDS
ACTCTTTGTACGCTATGGGA+AGG 0.676286 1.3:-41125297 MS.gene41007:CDS
TGCAGCTTCCATAGACAACG+TGG 0.717902 1.3:+41125829 None:intergenic
AAGAACAAAAGAAAGCTTTG+GGG 0.726813 1.3:+41125054 None:intergenic
CTTCACATAGAGCTCCATGG+AGG 0.762445 1.3:+41125422 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGAAATTTTTGATTTTTT+TGG - chr1.3:41125315-41125334 MS.gene41007:CDS 10.0%
!! ACAAATTATGAAGAAAAAGT+TGG - chr1.3:41125433-41125452 MS.gene41007:CDS 20.0%
!!! ACTTTTTCTTCATAATTTGT+TGG + chr1.3:41125433-41125452 None:intergenic 20.0%
!!! ATCAAAAATTTCTTTGAAGT+TGG + chr1.3:41125310-41125329 None:intergenic 20.0%
!!! ATTTTTGATTTTTTTGGAGA+TGG - chr1.3:41125321-41125340 MS.gene41007:CDS 20.0%
!!! GAAACTATCAAGATTTTTTT+TGG + chr1.3:41125741-41125760 None:intergenic 20.0%
! AAATTAAGGTTGTATGATCA+TGG + chr1.3:41125158-41125177 None:intergenic 25.0%
! ATGAATTTGCACCAATTAAT+TGG - chr1.3:41125085-41125104 MS.gene41007:CDS 25.0%
! ATGTCCATAATTCAATGTAT+TGG - chr1.3:41125006-41125025 MS.gene41007:CDS 25.0%
! ATGTTTCATTCATTTCCAAA+TGG - chr1.3:41125387-41125406 MS.gene41007:CDS 25.0%
! TAAATTCTAATTCCCATGTA+TGG - chr1.3:41125349-41125368 MS.gene41007:CDS 25.0%
! TCAGATACATCATTAAGAAA+TGG + chr1.3:41125473-41125492 None:intergenic 25.0%
! TCCATGATGTTTCAAAATTA+AGG + chr1.3:41125172-41125191 None:intergenic 25.0%
! TTCAAGAAATCAAAGATAAC+TGG - chr1.3:41125999-41126018 MS.gene41007:CDS 25.0%
!! ATAATTTTGTCTTCGAGAAT+AGG + chr1.3:41125980-41125999 None:intergenic 25.0%
!! CTTAATGATGTATCTGAAAT+AGG - chr1.3:41125476-41125495 MS.gene41007:CDS 25.0%
!!! AAGTTCATTGCTTTTAATAC+AGG - chr1.3:41126319-41126338 MS.gene41007:CDS 25.0%
!!! ACCTTAATTTTGAAACATCA+TGG - chr1.3:41125168-41125187 MS.gene41007:CDS 25.0%
!!! TTAATTTTGAAACATCATGG+AGG - chr1.3:41125171-41125190 MS.gene41007:CDS 25.0%
AAAGCAATGAACTTGTAAGA+TGG + chr1.3:41126313-41126332 None:intergenic 30.0%
AAGAACAAAAGAAAGCTTTG+GGG + chr1.3:41126452-41126471 None:intergenic 30.0%
ACCACCTTTATGTGAAAATT+CGG + chr1.3:41126412-41126431 None:intergenic 30.0%
ATTATCACCTCATCTATAAC+AGG + chr1.3:41125638-41125657 None:intergenic 30.0%
ATTTCTTCCTGTTATAGATG+AGG - chr1.3:41125628-41125647 MS.gene41007:CDS 30.0%
CATCATTAAGAAATGGTAGT+AGG + chr1.3:41125466-41125485 None:intergenic 30.0%
CCAATTAATTGGCCAATAAT+TGG - chr1.3:41125096-41125115 MS.gene41007:CDS 30.0%
CCAATTATTGGCCAATTAAT+TGG + chr1.3:41125099-41125118 None:intergenic 30.0%
GAAGAACAAAAGAAAGCTTT+GGG + chr1.3:41126453-41126472 None:intergenic 30.0%
TAGATGAGGTGATAATTTAC+CGG - chr1.3:41125642-41125661 MS.gene41007:CDS 30.0%
TCCATAATTCAATGTATTGG+AGG - chr1.3:41125009-41125028 MS.gene41007:CDS 30.0%
TCCTCCAATACATTGAATTA+TGG + chr1.3:41125013-41125032 None:intergenic 30.0%
TGAAGAACAAAAGAAAGCTT+TGG + chr1.3:41126454-41126473 None:intergenic 30.0%
TTGTTGGAAAAAGTTCTTGA+AGG + chr1.3:41125417-41125436 None:intergenic 30.0%
TTTGTTCTTCACATGAAACA+TGG - chr1.3:41126463-41126482 MS.gene41007:CDS 30.0%
! CTTAGCTCATTAAACTTGTT+TGG + chr1.3:41125590-41125609 None:intergenic 30.0%
! GTTACCGAATTTTCACATAA+AGG - chr1.3:41126405-41126424 MS.gene41007:CDS 30.0%
! TTCACAAACACAAGCTTTAT+CGG - chr1.3:41125219-41125238 MS.gene41007:CDS 30.0%
AAATCCGATATACTACCTAG+TGG - chr1.3:41126151-41126170 MS.gene41007:intron 35.0%
AGTGGATGTATAGGAAGATT+AGG + chr1.3:41125047-41125066 None:intergenic 35.0%
ATTGCACAGATATGCTCAAA+AGG + chr1.3:41126130-41126149 None:intergenic 35.0%
CAGCTTCATTCAAATGAAGA+TGG - chr1.3:41126369-41126388 MS.gene41007:CDS 35.0%
GAGTACAGTAACCTTGTATT+TGG + chr1.3:41126190-41126209 None:intergenic 35.0%
GATGTATAGGAAGATTAGGA+TGG + chr1.3:41125043-41125062 None:intergenic 35.0%
GGTTGTATGATCATGGAAAT+TGG + chr1.3:41125151-41125170 None:intergenic 35.0%
TATGATCATGGAAATTGGAC+AGG + chr1.3:41125146-41125165 None:intergenic 35.0%
TGGTCAAGAAAGGAAGTTAA+AGG - chr1.3:41125712-41125731 MS.gene41007:CDS 35.0%
! AACTTGTTTGGAAGGCAATT+AGG + chr1.3:41125578-41125597 None:intergenic 35.0%
! ACCGAATTTTCACATAAAGG+TGG - chr1.3:41126408-41126427 MS.gene41007:CDS 35.0%
! GAATTTTCACATAAAGGTGG+TGG - chr1.3:41126411-41126430 MS.gene41007:CDS 35.0%
! GCTCATTAAACTTGTTTGGA+AGG + chr1.3:41125586-41125605 None:intergenic 35.0%
! GTTCTTGAAGGTTTTCCATT+TGG + chr1.3:41125405-41125424 None:intergenic 35.0%
!! AATTTTGGCAACTACGGAAA+GGG - chr1.3:41125282-41125301 MS.gene41007:CDS 35.0%
!! AGCAAGAATTTTGGCAACTA+CGG - chr1.3:41125276-41125295 MS.gene41007:CDS 35.0%
!! TCTCTCTTTTTAGCAGGAAA+TGG - chr1.3:41125905-41125924 MS.gene41007:CDS 35.0%
!! TCTCTGTTGTTTCCATACAT+GGG + chr1.3:41125364-41125383 None:intergenic 35.0%
!! TTCTCTGTTGTTTCCATACA+TGG + chr1.3:41125365-41125384 None:intergenic 35.0%
ACAGGACCTAGAAGTTGTAT+GGG - chr1.3:41126337-41126356 MS.gene41007:CDS 40.0%
ACCTAGAAGTTGTATGGGTA+AGG - chr1.3:41126342-41126361 MS.gene41007:CDS 40.0%
ACTGTACTCTTTGTACGCTA+TGG - chr1.3:41126201-41126220 MS.gene41007:CDS 40.0%
ACTTCATACCACGTTGTCTA+TGG - chr1.3:41125666-41125685 MS.gene41007:CDS 40.0%
AGCATCTGCACTATTGCATT+TGG - chr1.3:41125545-41125564 MS.gene41007:CDS 40.0%
AGCGTGTTAGTCCAAATACA+AGG - chr1.3:41126176-41126195 MS.gene41007:intron 40.0%
ATCAACATTCATCGGATCAC+TGG + chr1.3:41125247-41125266 None:intergenic 40.0%
ATGAAGGATGGATCTGGAAA+GGG - chr1.3:41125845-41125864 MS.gene41007:CDS 40.0%
CAATAATTGGTATGCTACCG+GGG - chr1.3:41125109-41125128 MS.gene41007:CDS 40.0%
CAATTAGTTCAGGTCTCAGT+TGG - chr1.3:41125930-41125949 MS.gene41007:CDS 40.0%
CCAATAATTGGTATGCTACC+GGG - chr1.3:41125108-41125127 MS.gene41007:CDS 40.0%
CTCTCCACTAGGTAGTATAT+CGG + chr1.3:41126158-41126177 None:intergenic 40.0%
CTGTACTCTTTGTACGCTAT+GGG - chr1.3:41126202-41126221 MS.gene41007:CDS 40.0%
GCCAATAATTGGTATGCTAC+CGG - chr1.3:41125107-41125126 MS.gene41007:CDS 40.0%
GCGATGTGATCAACATTCAT+CGG + chr1.3:41125255-41125274 None:intergenic 40.0%
GGAAATGGCACAATTAGTTC+AGG - chr1.3:41125920-41125939 MS.gene41007:CDS 40.0%
GGAAGGATGGAACAAATATG+GGG - chr1.3:41126223-41126242 MS.gene41007:CDS 40.0%
GGGAAGGATGGAACAAATAT+GGG - chr1.3:41126222-41126241 MS.gene41007:CDS 40.0%
GTCTATGGAAGCTGCAAAAA+TGG - chr1.3:41125681-41125700 MS.gene41007:CDS 40.0%
TACAGGACCTAGAAGTTGTA+TGG - chr1.3:41126336-41126355 MS.gene41007:CDS 40.0%
TACAGGAGGATAAAGCCTTA+AGG + chr1.3:41126107-41126126 None:intergenic 40.0%
TCAAGATCCACATCTCTCAA+AGG + chr1.3:41126049-41126068 None:intergenic 40.0%
TCACATGAAACATGGCTTGA+AGG - chr1.3:41126471-41126490 MS.gene41007:CDS 40.0%
TCCTTACCCATACAACTTCT+AGG + chr1.3:41126346-41126365 None:intergenic 40.0%
TCTTCCTATACATCCACTAC+TGG - chr1.3:41125049-41125068 MS.gene41007:CDS 40.0%
TGGAATTTAAGCCTGAGAGT+TGG - chr1.3:41126257-41126276 MS.gene41007:CDS 40.0%
TGGGAAGGATGGAACAAATA+TGG - chr1.3:41126221-41126240 MS.gene41007:CDS 40.0%
! ATATGCTCAAAAGGTACAGG+AGG + chr1.3:41126121-41126140 None:intergenic 40.0%
! CAGATATGCTCAAAAGGTAC+AGG + chr1.3:41126124-41126143 None:intergenic 40.0%
! CATTTCGATTTGAAGGAGCT+TGG - chr1.3:41125196-41125215 MS.gene41007:CDS 40.0%
! GGAGGAACATTTCGATTTGA+AGG - chr1.3:41125189-41125208 MS.gene41007:CDS 40.0%
! TGTATCTGAAATAGGTGCTC+AGG - chr1.3:41125484-41125503 MS.gene41007:CDS 40.0%
!! AAAGAAAGCTTTGGGGTTAC+AGG + chr1.3:41126445-41126464 None:intergenic 40.0%
!! ATTTTGGCAACTACGGAAAG+GGG - chr1.3:41125283-41125302 MS.gene41007:CDS 40.0%
!! CTTTGTAAAAGCGCTGATGA+AGG - chr1.3:41125829-41125848 MS.gene41007:CDS 40.0%
!! GAATTTTGGCAACTACGGAA+AGG - chr1.3:41125281-41125300 MS.gene41007:CDS 40.0%
!! GTACTCTCTCTCTTTTTAGC+AGG - chr1.3:41125899-41125918 MS.gene41007:CDS 40.0%
!! TTTCACATAAAGGTGGTGGA+AGG - chr1.3:41126415-41126434 MS.gene41007:CDS 40.0%
AATATGGGGAGAAGACTGCA+TGG - chr1.3:41126237-41126256 MS.gene41007:CDS 45.0%
ACTCTTTGTACGCTATGGGA+AGG - chr1.3:41126206-41126225 MS.gene41007:CDS 45.0%
AGTCTGATTCTCCTCTTGTG+TGG + chr1.3:41126026-41126045 None:intergenic 45.0%
CCCGGTAGCATACCAATTAT+TGG + chr1.3:41125111-41125130 None:intergenic 45.0%
CTCTCTGATATCCAACTCTC+AGG + chr1.3:41126271-41126290 None:intergenic 45.0%
GAGAGTTGGATATCAGAGAG+AGG - chr1.3:41126271-41126290 MS.gene41007:CDS 45.0%
GAGCTCTATGTGAAGCCTTA+AGG - chr1.3:41126089-41126108 MS.gene41007:CDS 45.0%
GATAAGCTAGTGTACCTCCA+TGG - chr1.3:41126067-41126086 MS.gene41007:CDS 45.0%
GATGAAGGATGGATCTGGAA+AGG - chr1.3:41125844-41125863 MS.gene41007:CDS 45.0%
GCACTTGCTTTGCTCTTGTT+TGG + chr1.3:41125786-41125805 None:intergenic 45.0%
GTCTGATTCTCCTCTTGTGT+GGG + chr1.3:41126025-41126044 None:intergenic 45.0%
TGAAGGATGGATCTGGAAAG+GGG - chr1.3:41125846-41125865 MS.gene41007:CDS 45.0%
TTTGTACGCTATGGGAAGGA+TGG - chr1.3:41126210-41126229 MS.gene41007:CDS 45.0%
! ATCTGAAATAGGTGCTCAGG+TGG - chr1.3:41125487-41125506 MS.gene41007:CDS 45.0%
! CACATCGCGAGCAAGAATTT+TGG - chr1.3:41125267-41125286 MS.gene41007:CDS 45.0%
! TCAGACTCCTTTGAGAGATG+TGG - chr1.3:41126039-41126058 MS.gene41007:CDS 45.0%
!! GTAAAAGCGCTGATGAAGGA+TGG - chr1.3:41125833-41125852 MS.gene41007:CDS 45.0%
!! GTCTCCAGTAGTGGATGTAT+AGG + chr1.3:41125056-41125075 None:intergenic 45.0%
!!! CAGGTCTCAGTTGGTTTTTC+TGG - chr1.3:41125939-41125958 MS.gene41007:CDS 45.0%
AGATAACTGGCCCACACAAG+AGG - chr1.3:41126012-41126031 MS.gene41007:CDS 50.0%
AGGCTTCACATAGAGCTCCA+TGG + chr1.3:41126087-41126106 None:intergenic 50.0%
CTCTATTGCGTCTCCAGTAG+TGG + chr1.3:41125065-41125084 None:intergenic 50.0%
CTGCAAAAATGGCTCGACGT+TGG - chr1.3:41125692-41125711 MS.gene41007:CDS 50.0%
CTTCACATAGAGCTCCATGG+AGG + chr1.3:41126084-41126103 None:intergenic 50.0%
GAAGGATGGATCTGGAAAGG+GGG - chr1.3:41125847-41125866 MS.gene41007:CDS 50.0%
GACAACGTGGTATGAAGTGC+CGG + chr1.3:41125664-41125683 None:intergenic 50.0%
GTGCAGCAGCAGTGAAGAAA+TGG - chr1.3:41125802-41125821 MS.gene41007:CDS 50.0%
TGCAGCTTCCATAGACAACG+TGG + chr1.3:41125677-41125696 None:intergenic 50.0%
TGGATCTGGAAAGGGGGAAA+TGG - chr1.3:41125853-41125872 MS.gene41007:CDS 50.0%
! ACCTACTCAAAGCATCCTCC+AGG + chr1.3:41125514-41125533 None:intergenic 50.0%
! ACCTGGAGGATGCTTTGAGT+AGG - chr1.3:41125510-41125529 MS.gene41007:CDS 50.0%
AATAGGTGCTCAGGTGGACC+TGG - chr1.3:41125493-41125512 MS.gene41007:CDS 55.0%
GGACTAACACGCTCTCCACT+AGG + chr1.3:41126169-41126188 None:intergenic 55.0%
GGCTCGACGTTGGTCAAGAA+AGG - chr1.3:41125702-41125721 MS.gene41007:CDS 55.0%
! GCGCTGATGAAGGATGGATC+TGG - chr1.3:41125839-41125858 MS.gene41007:CDS 55.0%
GACAGGTGACGCAAAAGCCC+CGG + chr1.3:41125129-41125148 None:intergenic 60.0%
AGGTGCTCAGGTGGACCTGG+AGG - chr1.3:41125496-41125515 MS.gene41007:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 41125006 41126519 41125006 ID=MS.gene41007
chr1.3 mRNA 41125006 41126519 41125006 ID=MS.gene41007.t1;Parent=MS.gene41007
chr1.3 exon 41126183 41126519 41126183 ID=MS.gene41007.t1.exon1;Parent=MS.gene41007.t1
chr1.3 CDS 41126183 41126519 41126183 ID=cds.MS.gene41007.t1;Parent=MS.gene41007.t1
chr1.3 exon 41125006 41126144 41125006 ID=MS.gene41007.t1.exon2;Parent=MS.gene41007.t1
chr1.3 CDS 41125006 41126144 41125006 ID=cds.MS.gene41007.t1;Parent=MS.gene41007.t1
Gene Sequence

>MS.gene41007

ATGTCCATAATTCAATGTATTGGAGGATTTGTAGCCATCCTAATCTTCCTATACATCCACTACTGGAGACGCAATAGAGATGAATTTGCACCAATTAATTGGCCAATAATTGGTATGCTACCGGGGCTTTTGCGTCACCTGTCCAATTTCCATGATCATACAACCTTAATTTTGAAACATCATGGAGGAACATTTCGATTTGAAGGAGCTTGGTTCACAAACACAAGCTTTATCGGTACCAGTGATCCGATGAATGTTGATCACATCGCGAGCAAGAATTTTGGCAACTACGGAAAGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAATTCCCATGTATGGAAACAACAGAGAACAATGTTTCATTCATTTCCAAATGGAAAACCTTCAAGAACTTTTTCCAACAAATTATGAAGAAAAAGTTGGAGAACTGCCTACTACCATTTCTTAATGATGTATCTGAAATAGGTGCTCAGGTGGACCTGGAGGATGCTTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTGCATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAAGAGAAATTGCTTATCAAAAATTTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCATACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCGACGTTGGTCAAGAAAGGAAGTTAAAGGAAGCCAAAAAAAATCTTGATAGTTTCTTGTATGAAAGTATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATGACTTTGTAAAAGCGCTGATGAAGGATGGATCTGGAAAGGGGGAAATGGACGAGAAGTATCTTAGAGACAATGTACTCTCTCTCTTTTTAGCAGGAAATGGCACAATTAGTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAATTCATCCTATTCTCGAAGACAAAATTATTCAAGAAATCAAAGATAACTGGCCCACACAAGAGGAGAATCAGACTCCTTTGAGAGATGTGGATCTTGATAAGCTAGTGTACCTCCATGGAGCTCTATGTGAAGCCTTAAGGCTTTATCCTCCTGTACCTTTTGAGCATATCTGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTACTGTACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGTTGGATATCAGAGAGAGGACGCATTATACATGTACCATCTTACAAGTTCATTGCTTTTAATACAGGACCTAGAAGTTGTATGGGTAAGGATATCAGCTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACCGAATTTTCACATAAAGGTGGTGGAAGGTCATCCTGTAACCCCAAAGCTTTCTTTTGTTCTTCACATGAAACATGGCTTGAAGGTTAAAGTCACTAAGAGATGCATTTGA

Protein sequence

>MS.gene41007.t1

MSIIQCIGGFVAILIFLYIHYWRRNRDEFAPINWPIIGMLPGLLRHLSNFHDHTTLILKHHGGTFRFEGAWFTNTSFIGTSDPMNVDHIASKNFGNYGKGSNFKEIFDFFGDENNVSFISKWKTFKNFFQQIMKKKLENCLLPFLNDVSEIGAQVDLEDALSRFTFDSICTIAFGFDPNCLPNKFNELREIAYQKFLPVIDEVIIYRHFIPRCLWKLQKWLDVGQERKLKEAKKNLDSFLYESITFSKQEQSKCSSSEEMDDFVKALMKDGSGKGEMDEKYLRDNVLSLFLAGNGTISSGLSWFFWLVSIHPILEDKIIQEIKDNWPTQEENQTPLRDVDLDKLVYLHGALCEALRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPESWISERGRIIHVPSYKFIAFNTGPRSCMGKDISFIQMKMVAAALLPNFHIKVVEGHPVTPKLSFVLHMKHGLKVKVTKRCI