Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28835.t1 | XP_003626001.1 | 99.3 | 433 | 3 | 0 | 1 | 433 | 1 | 433 | 7.80E-240 | 839.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28835.t1 | Q8VZL6 | 69.8 | 441 | 120 | 6 | 2 | 433 | 5 | 441 | 4.3e-162 | 572.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28835.t1 | G7KTN9 | 99.3 | 433 | 3 | 0 | 1 | 433 | 1 | 433 | 5.6e-240 | 839.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28835.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene28835 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene28835 | 0.803585 | 3.25E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene28835 | 0.825273 | 5.13E-54 | -1.69E-46 |
| MS.gene049382 | MS.gene28835 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene28835 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene04984 | MS.gene28835 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene28835 | 0.842824 | 2.04E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene28835 | 0.830974 | 2.17E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene28835 | 0.837471 | 5.10E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene28835 | 0.911871 | 3.72E-83 | -1.69E-46 |
| MS.gene050623 | MS.gene28835 | -0.83481 | 2.42E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene28835 | 0.817112 | 3.90E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene28835 | 0.814707 | 1.34E-51 | -1.69E-46 |
| MS.gene050724 | MS.gene28835 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene050762 | MS.gene28835 | 0.86653 | 2.67E-65 | -1.69E-46 |
| MS.gene050763 | MS.gene28835 | 0.867552 | 1.26E-65 | -1.69E-46 |
| MS.gene050807 | MS.gene28835 | 0.813361 | 2.66E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene28835 | 0.808239 | 3.41E-50 | -1.69E-46 |
| MS.gene050987 | MS.gene28835 | 0.826872 | 2.14E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene28835 | 0.822101 | 2.84E-53 | -1.69E-46 |
| MS.gene051789 | MS.gene28835 | 0.808479 | 3.04E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene28835 | 0.800042 | 1.73E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene28835 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene28835 | 0.813929 | 2.00E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene28835 | 0.830893 | 2.27E-55 | -1.69E-46 |
| MS.gene052856 | MS.gene28835 | 0.824084 | 9.77E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene28835 | 0.812748 | 3.63E-51 | -1.69E-46 |
| MS.gene052860 | MS.gene28835 | 0.825515 | 4.49E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene28835 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene28835 | 0.818307 | 2.10E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene28835 | 0.852662 | 3.98E-61 | -1.69E-46 |
| MS.gene05462 | MS.gene28835 | 0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene28835 | 0.842509 | 2.48E-58 | -1.69E-46 |
| MS.gene05510 | MS.gene28835 | 0.820789 | 5.70E-53 | -1.69E-46 |
| MS.gene055441 | MS.gene28835 | 0.811638 | 6.33E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene28835 | 0.807351 | 5.27E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene28835 | 0.804409 | 2.19E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene28835 | 0.815505 | 8.93E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene28835 | 0.812652 | 3.81E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene28835 | 0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene05761 | MS.gene28835 | 0.830767 | 2.44E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene28835 | 0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene28835 | 0.846156 | 2.59E-59 | -1.69E-46 |
| MS.gene058146 | MS.gene28835 | 0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene28835 | 0.802264 | 6.09E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene28835 | 0.806186 | 9.30E-50 | -1.69E-46 |
| MS.gene058982 | MS.gene28835 | 0.80852 | 2.97E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene28835 | 0.813846 | 2.08E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene28835 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene059759 | MS.gene28835 | 0.803302 | 3.72E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene28835 | 0.845253 | 4.56E-59 | -1.69E-46 |
| MS.gene060297 | MS.gene28835 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene060480 | MS.gene28835 | 0.810197 | 1.30E-50 | -1.69E-46 |
| MS.gene060677 | MS.gene28835 | 0.814174 | 1.76E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene28835 | 0.832699 | 8.15E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene28835 | 0.82474 | 6.85E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene28835 | 0.837534 | 4.91E-57 | -1.69E-46 |
| MS.gene060803 | MS.gene28835 | 0.832857 | 7.44E-56 | -1.69E-46 |
| MS.gene060998 | MS.gene28835 | 0.836059 | 1.17E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28835.t1 | MTR_7g109870 | 99.307 | 433 | 3 | 0 | 1 | 433 | 1 | 433 | 0.0 | 893 |
| MS.gene28835.t1 | MTR_7g109870 | 98.398 | 437 | 3 | 1 | 1 | 433 | 1 | 437 | 0.0 | 886 |
| MS.gene28835.t1 | MTR_1g086590 | 69.340 | 424 | 102 | 4 | 1 | 412 | 1 | 408 | 0.0 | 583 |
| MS.gene28835.t1 | MTR_1g086590 | 69.340 | 424 | 102 | 4 | 1 | 412 | 1 | 408 | 0.0 | 582 |
| MS.gene28835.t1 | MTR_1g086590 | 70.529 | 397 | 97 | 3 | 1 | 393 | 1 | 381 | 0.0 | 557 |
| MS.gene28835.t1 | MTR_1g086590 | 68.732 | 339 | 86 | 3 | 1 | 335 | 1 | 323 | 1.45e-162 | 461 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28835.t1 | AT2G47210 | 69.841 | 441 | 120 | 6 | 2 | 433 | 5 | 441 | 0.0 | 607 |
| MS.gene28835.t1 | AT2G47210 | 69.841 | 441 | 120 | 6 | 2 | 433 | 5 | 441 | 0.0 | 607 |
| MS.gene28835.t1 | AT2G47210 | 69.841 | 441 | 120 | 6 | 2 | 433 | 5 | 441 | 0.0 | 607 |
Find 100 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACCAATATACCTGTTTC+TGG | 0.156332 | 7.4:-5561934 | None:intergenic |
| ATTCCCGATTCGTTGAATTT+TGG | 0.213340 | 7.4:+5562356 | MS.gene28835:CDS |
| CTTGCCAGGGCTGCATCTTC+CGG | 0.253582 | 7.4:+5559793 | MS.gene28835:CDS |
| TTTCTCTTGTTGTCTTGTTT+GGG | 0.260220 | 7.4:-5560052 | None:intergenic |
| ATTTCTTGTGAAACATTATA+TGG | 0.283878 | 7.4:-5559997 | None:intergenic |
| TCGGACTGTAGAGGAGTTAA+AGG | 0.299488 | 7.4:+5559555 | MS.gene28835:CDS |
| TTTGACTTCACCTTAATGAT+AGG | 0.315672 | 7.4:-5559832 | None:intergenic |
| TTGCCAGGGCTGCATCTTCC+GGG | 0.316334 | 7.4:+5559794 | MS.gene28835:CDS |
| AGGCGAAAGGGTTGGCAAAA+AGG | 0.324610 | 7.4:+5562483 | MS.gene28835:intron |
| TGCAACACATCCTATCATTA+AGG | 0.347399 | 7.4:+5559822 | MS.gene28835:CDS |
| ATGGACGCGAAGGATATTCT+TGG | 0.347443 | 7.4:+5558218 | MS.gene28835:CDS |
| ATCATCTTTACGAGCAGAAT+TGG | 0.368961 | 7.4:-5558707 | None:intergenic |
| CACAAGAAATGGAGCGAAAA+CGG | 0.373448 | 7.4:+5560010 | MS.gene28835:CDS |
| ATATAATGTTTCACAAGAAA+TGG | 0.380297 | 7.4:+5559999 | MS.gene28835:CDS |
| TTTAGCTACCTTGTTGTACT+TGG | 0.384441 | 7.4:-5558878 | None:intergenic |
| TCCCTGTCATGTAGTGTTGC+GGG | 0.387723 | 7.4:+5559762 | MS.gene28835:intron |
| CGAGTTACGGATGGCTTCTA+AGG | 0.391035 | 7.4:+5560216 | MS.gene28835:CDS |
| AATTGAGAAGCATCAATTGA+TGG | 0.396902 | 7.4:-5558465 | None:intergenic |
| ACCTCCAAAATTCAACGAAT+CGG | 0.405812 | 7.4:-5562360 | None:intergenic |
| CTTGTTGTCTTGTTTGGGAG+AGG | 0.408483 | 7.4:-5560047 | None:intergenic |
| TTTCCGACCTTTGGTGTGCC+TGG | 0.419064 | 7.4:-5562226 | None:intergenic |
| TTCAGCTTCGTGTATATTTG+AGG | 0.419331 | 7.4:+5561501 | MS.gene28835:intron |
| TCCTCTACAGTCCGAGATGA+TGG | 0.419890 | 7.4:-5559547 | None:intergenic |
| AGCAAACATTGCAAGATCTC+GGG | 0.423802 | 7.4:+5561594 | MS.gene28835:CDS |
| TGCGGGCTATATTACTTGCC+AGG | 0.427836 | 7.4:+5559779 | MS.gene28835:CDS |
| ATGATCTTCATCTTTACCAT+TGG | 0.430773 | 7.4:+5558725 | MS.gene28835:CDS |
| TGATCTTCATCTTTACCATT+GGG | 0.431644 | 7.4:+5558726 | MS.gene28835:CDS |
| ACAAGAAATGGAGCGAAAAC+GGG | 0.436669 | 7.4:+5560011 | MS.gene28835:CDS |
| GGTTACTGAACAGTCTCAAT+TGG | 0.436817 | 7.4:+5560916 | MS.gene28835:intron |
| GTCAATGGTGTTCTACCTAC+TGG | 0.449074 | 7.4:+5558841 | MS.gene28835:CDS |
| ATGGCTGAATCTCCAGAAAC+AGG | 0.450187 | 7.4:+5561922 | MS.gene28835:CDS |
| TAATTCATTTGTCTCCTCCT+TGG | 0.460992 | 7.4:-5559470 | None:intergenic |
| AACTGTTGTTTCAGGCGAAA+GGG | 0.463388 | 7.4:+5562471 | MS.gene28835:intron |
| CCTCCAAAATTCAACGAATC+GGG | 0.465713 | 7.4:-5562359 | None:intergenic |
| CAAGCTTCAAACTCAACTGC+TGG | 0.466195 | 7.4:+5561548 | MS.gene28835:CDS |
| CTGGAGTTCGGACTATCAAA+CGG | 0.471345 | 7.4:+5561567 | MS.gene28835:CDS |
| GACATATGCACTCGAGCAAA+TGG | 0.476593 | 7.4:+5561523 | MS.gene28835:CDS |
| GAATGTGCAACTTCCACAAA+TGG | 0.479963 | 7.4:+5561006 | MS.gene28835:CDS |
| GAGCAAACATTGCAAGATCT+CGG | 0.481522 | 7.4:+5561593 | MS.gene28835:CDS |
| GCATCAATTGATGGCATAAG+AGG | 0.485257 | 7.4:-5558456 | None:intergenic |
| TAAAAGACCTAGAAAACAAA+AGG | 0.485836 | 7.4:+5562669 | MS.gene28835:CDS |
| GCGAAAACGGGCACTGTCCA+TGG | 0.488734 | 7.4:+5560023 | MS.gene28835:CDS |
| GCAGAAGGAACAACCATTTG+TGG | 0.489544 | 7.4:-5561019 | None:intergenic |
| TTTCAGGTTCGAGTAGTCAA+TGG | 0.491064 | 7.4:+5558826 | MS.gene28835:intron |
| ACCTAGAAAACAAAAGGCCT+CGG | 0.494235 | 7.4:+5562675 | MS.gene28835:CDS |
| TACTCTAGCTTCTCTTCGCA+TGG | 0.494649 | 7.4:+5561054 | MS.gene28835:CDS |
| GTCCCCGGAAGATGCAGCCC+TGG | 0.501841 | 7.4:-5559797 | None:intergenic |
| AAACTGTTGTTTCAGGCGAA+AGG | 0.502998 | 7.4:+5562470 | MS.gene28835:intron |
| ACCTCGCGTGAAATGCCATC+AGG | 0.510231 | 7.4:-5558314 | None:intergenic |
| ACAAGAGAAAAGAGATGAAG+AGG | 0.510309 | 7.4:+5560065 | MS.gene28835:CDS |
| CAAACTCAACTGCTGGAGTT+CGG | 0.511526 | 7.4:+5561555 | MS.gene28835:CDS |
| ATCACGGAAAGATGAACCTT+CGG | 0.512389 | 7.4:-5562185 | None:intergenic |
| GTCCCTGTCATGTAGTGTTG+CGG | 0.515697 | 7.4:+5559761 | MS.gene28835:intron |
| ACTTTATTTGTATAGGGGCA+TGG | 0.516874 | 7.4:+5562625 | MS.gene28835:intron |
| AAAGCCTCCTACTCACGAAA+AGG | 0.530448 | 7.4:+5558494 | MS.gene28835:CDS |
| TGGAGTTCGGACTATCAAAC+GGG | 0.542516 | 7.4:+5561568 | MS.gene28835:CDS |
| TCTTTCCGTGATGGATCCTA+CGG | 0.547451 | 7.4:+5562196 | MS.gene28835:CDS |
| TTAAAGGATCGATATTATAG+TGG | 0.547811 | 7.4:+5559571 | MS.gene28835:CDS |
| GAAGGTTCATCTTTCCGTGA+TGG | 0.548182 | 7.4:+5562187 | MS.gene28835:CDS |
| CTTAGAAGCCATCCGTAACT+CGG | 0.558886 | 7.4:-5560215 | None:intergenic |
| GTTGCAGAGAGGGCTGTCCC+TGG | 0.559311 | 7.4:+5560965 | MS.gene28835:CDS |
| TGTGGAAGTTGCACATTCGA+AGG | 0.559456 | 7.4:-5561001 | None:intergenic |
| TATCAGCTATAACAACAAAA+CGG | 0.560637 | 7.4:-5559519 | None:intergenic |
| GTTGTTTCAGGCGAAAGGGT+TGG | 0.562497 | 7.4:+5562475 | MS.gene28835:intron |
| TTTCTCTGAGATTCTTTGGG+AGG | 0.563303 | 7.4:-5558290 | None:intergenic |
| TAGGTTTATGCACTTACTGG+TGG | 0.564499 | 7.4:+5558426 | MS.gene28835:intron |
| TGCCAGGGCTGCATCTTCCG+GGG | 0.572929 | 7.4:+5559795 | MS.gene28835:CDS |
| GTAGAAGCATTATCTGCAGA+AGG | 0.577553 | 7.4:-5561034 | None:intergenic |
| TCCAGGTAAATTTGAAACCG+AGG | 0.579026 | 7.4:+5561843 | MS.gene28835:intron |
| CCAGGTAAATTTGAAACCGA+GGG | 0.579215 | 7.4:+5561844 | MS.gene28835:intron |
| CTGATAGGTTCCCATCATCT+CGG | 0.582805 | 7.4:+5559536 | MS.gene28835:CDS |
| TCTTGTTTGGGAGAGGACCA+TGG | 0.585148 | 7.4:-5560040 | None:intergenic |
| TTACGAGCAGAATTGGTGAA+AGG | 0.585208 | 7.4:-5558700 | None:intergenic |
| GCGGGCTATATTACTTGCCA+GGG | 0.590495 | 7.4:+5559780 | MS.gene28835:CDS |
| CCTCTACAGTCCGAGATGAT+GGG | 0.592270 | 7.4:-5559546 | None:intergenic |
| TGTGCCTGGTGTTTCACCGT+AGG | 0.598536 | 7.4:-5562212 | None:intergenic |
| GGATCCTACGGTGAAACACC+AGG | 0.600080 | 7.4:+5562208 | MS.gene28835:CDS |
| GTGGCAGGTGCAATATAAAG+AGG | 0.604781 | 7.4:+5562162 | MS.gene28835:intron |
| GAAACCCTAAATGGACGCGA+AGG | 0.605606 | 7.4:+5558208 | None:intergenic |
| CCCATCATCTCGGACTGTAG+AGG | 0.606561 | 7.4:+5559546 | MS.gene28835:CDS |
| TGATGCAGAAGTTGCAGAGA+GGG | 0.607610 | 7.4:+5560955 | MS.gene28835:CDS |
| GAAGGAGATACAGTTTCACC+AGG | 0.611694 | 7.4:-5560983 | None:intergenic |
| ACCTGATGGCATTTCACGCG+AGG | 0.613643 | 7.4:+5558313 | MS.gene28835:CDS |
| AAGAATAGCCGAGTTACGGA+TGG | 0.620429 | 7.4:+5560207 | MS.gene28835:CDS |
| GCAAAAGAATAGTCTCCAGT+AGG | 0.625902 | 7.4:-5558856 | None:intergenic |
| TCAATTGATGGCATAAGAGG+TGG | 0.628674 | 7.4:-5558453 | None:intergenic |
| AATTATTTGATTTGTGTGAG+AGG | 0.630139 | 7.4:+5559488 | MS.gene28835:CDS |
| GAATCTCAGAGAAAACCTGA+TGG | 0.650054 | 7.4:+5558299 | MS.gene28835:CDS |
| GCAAACATTGCAAGATCTCG+GGG | 0.655130 | 7.4:+5561595 | MS.gene28835:CDS |
| AGGATGTGTTGCAATGTCCC+CGG | 0.656289 | 7.4:-5559812 | None:intergenic |
| TGAAACACCAGGCACACCAA+AGG | 0.660161 | 7.4:+5562219 | MS.gene28835:CDS |
| CCGGAGGAATTAAAGATCCG+AGG | 0.665879 | 7.4:-5562692 | None:intergenic |
| GTGCAATATAAAGAGGCCGA+AGG | 0.666909 | 7.4:+5562169 | MS.gene28835:CDS |
| ATCTACCTAGATGTGGACCA+AGG | 0.676327 | 7.4:+5559453 | MS.gene28835:intron |
| CATCATCAAATACACAGACG+AGG | 0.685360 | 7.4:+5558993 | MS.gene28835:CDS |
| TAAGAAGAGAAATACTAACA+TGG | 0.691447 | 7.4:+5561903 | MS.gene28835:CDS |
| CTGATGCAGAAGTTGCAGAG+AGG | 0.692246 | 7.4:+5560954 | MS.gene28835:CDS |
| TTTCACCGTAGGATCCATCA+CGG | 0.706383 | 7.4:-5562201 | None:intergenic |
| AAGGAGATACAGTTTCACCA+GGG | 0.739390 | 7.4:-5560982 | None:intergenic |
| TACCTAGATGTGGACCAAGG+AGG | 0.740553 | 7.4:+5559456 | MS.gene28835:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAATCAAAGAAATTT+GGG | - | chr7.4:5562127-5562146 | None:intergenic | 10.0% |
| !!! | AAATAATTTTTTTTAATGAG+GGG | + | chr7.4:5561418-5561437 | MS.gene28835:intron | 10.0% |
| !!! | AATTGAATTGTATTATTTTT+AGG | + | chr7.4:5558407-5558426 | MS.gene28835:intron | 10.0% |
| !!! | ATTAATTTTACATTTACTTT+TGG | + | chr7.4:5562563-5562582 | MS.gene28835:intron | 10.0% |
| !!! | CAAATAATTTTTTTTAATGA+GGG | + | chr7.4:5561417-5561436 | MS.gene28835:intron | 10.0% |
| !!! | TCAAATAATTTTTTTTAATG+AGG | + | chr7.4:5561416-5561435 | MS.gene28835:intron | 10.0% |
| !! | AATAAGATATTAAATGACTA+AGG | - | chr7.4:5560645-5560664 | None:intergenic | 15.0% |
| !! | AATTAAATCAAAGAAATTTG+GGG | - | chr7.4:5562126-5562145 | None:intergenic | 15.0% |
| !! | ACATAAAATAAATTTCAGTT+CGG | - | chr7.4:5559132-5559151 | None:intergenic | 15.0% |
| !! | ATATATGATATATTGTACAA+TGG | - | chr7.4:5559293-5559312 | None:intergenic | 15.0% |
| !! | ATGTAAAATTAATCAATTGA+CGG | - | chr7.4:5562556-5562575 | None:intergenic | 15.0% |
| !! | GTAATAGTACATTATTAAAA+TGG | - | chr7.4:5562590-5562609 | None:intergenic | 15.0% |
| !! | GTAATTAAATCAAAGAAATT+TGG | - | chr7.4:5562128-5562147 | None:intergenic | 15.0% |
| !! | TAATTAGACAAAAAAAATTG+TGG | - | chr7.4:5562528-5562547 | None:intergenic | 15.0% |
| !! | TATATGATATATTGTACAAT+GGG | - | chr7.4:5559292-5559311 | None:intergenic | 15.0% |
| !! | TATGTTTAATGATAAATAGA+TGG | - | chr7.4:5562444-5562463 | None:intergenic | 15.0% |
| !! | TCTAAATTTCTATAAAGTAA+GGG | + | chr7.4:5562413-5562432 | MS.gene28835:intron | 15.0% |
| !! | TTCTAAATTTCTATAAAGTA+AGG | + | chr7.4:5562412-5562431 | MS.gene28835:intron | 15.0% |
| !!! | ATTGATTTTATACATTTTTC+AGG | + | chr7.4:5560895-5560914 | MS.gene28835:intron | 15.0% |
| !!! | GTATTATTTTTTTTCTTTGA+AGG | - | chr7.4:5560097-5560116 | None:intergenic | 15.0% |
| !!! | TTTTAATAATGTACTATTAC+TGG | + | chr7.4:5562590-5562609 | MS.gene28835:intron | 15.0% |
| !! | AAAGAATGAATAAAGTGAAT+CGG | - | chr7.4:5558366-5558385 | None:intergenic | 20.0% |
| !! | AATTTGATATTTCGCTATTT+AGG | - | chr7.4:5561144-5561163 | None:intergenic | 20.0% |
| !! | ATATAATGTTTCACAAGAAA+TGG | + | chr7.4:5559999-5560018 | MS.gene28835:CDS | 20.0% |
| !! | ATATGATATATTGTACAATG+GGG | - | chr7.4:5559291-5559310 | None:intergenic | 20.0% |
| !! | ATTAAATCAAAGAAATTTGG+GGG | - | chr7.4:5562125-5562144 | None:intergenic | 20.0% |
| !! | ATTAAGAAAGATGGTTAATT+TGG | - | chr7.4:5561706-5561725 | None:intergenic | 20.0% |
| !! | ATTTCTTGTGAAACATTATA+TGG | - | chr7.4:5560000-5560019 | None:intergenic | 20.0% |
| !! | ATTTGATATTTCGCTATTTA+GGG | - | chr7.4:5561143-5561162 | None:intergenic | 20.0% |
| !! | GCAATCAATTTATATATCAA+TGG | + | chr7.4:5559228-5559247 | MS.gene28835:intron | 20.0% |
| !! | TAAAAAGTGACAGTTAAATA+GGG | + | chr7.4:5560789-5560808 | MS.gene28835:intron | 20.0% |
| !! | TATTAAGATGATTATCCAAA+CGG | + | chr7.4:5558641-5558660 | MS.gene28835:intron | 20.0% |
| !! | TGTAAAATTAATCAATTGAC+GGG | - | chr7.4:5562555-5562574 | None:intergenic | 20.0% |
| !! | TTAAAAAGTGACACTTAAAA+AGG | - | chr7.4:5560548-5560567 | None:intergenic | 20.0% |
| !! | TTAAAAAGTGACAGTTAAAT+AGG | + | chr7.4:5560788-5560807 | MS.gene28835:intron | 20.0% |
| !! | TTTATAGAAATTTAGAAAGC+AGG | - | chr7.4:5562409-5562428 | None:intergenic | 20.0% |
| !!! | CTTATATTGTTTTATTTTGC+AGG | + | chr7.4:5560168-5560187 | MS.gene28835:intron | 20.0% |
| !!! | TACAGTTTTTTGGAAATTTA+TGG | + | chr7.4:5559063-5559082 | MS.gene28835:intron | 20.0% |
| !!! | TTTTTATTATCAAGAGAAGA+TGG | - | chr7.4:5558263-5558282 | None:intergenic | 20.0% |
| ! | AAGTTTAGACATGAAAAATG+AGG | + | chr7.4:5559197-5559216 | MS.gene28835:intron | 25.0% |
| ! | AATAATGTACTATTACTGGT+TGG | + | chr7.4:5562594-5562613 | MS.gene28835:intron | 25.0% |
| ! | AATTTATATATCAATGGACC+TGG | + | chr7.4:5559234-5559253 | MS.gene28835:intron | 25.0% |
| ! | AGAAATCAGAATTAGATCAT+AGG | - | chr7.4:5560314-5560333 | None:intergenic | 25.0% |
| ! | AGATTCTACTATCTAATTCA+TGG | - | chr7.4:5561731-5561750 | None:intergenic | 25.0% |
| ! | AGTTTAGACATGAAAAATGA+GGG | + | chr7.4:5559198-5559217 | MS.gene28835:intron | 25.0% |
| ! | ATATTAATGCATTGAACACT+TGG | - | chr7.4:5559418-5559437 | None:intergenic | 25.0% |
| ! | ATCCATCACTTTGAATATTA+GGG | + | chr7.4:5560359-5560378 | MS.gene28835:intron | 25.0% |
| ! | ATGTATAAAATCAATATCCC+AGG | - | chr7.4:5560890-5560909 | None:intergenic | 25.0% |
| ! | ATTAAGATGATTATCCAAAC+GGG | + | chr7.4:5558642-5558661 | MS.gene28835:intron | 25.0% |
| ! | CCAAAAATATAGCAATGAAT+AGG | - | chr7.4:5558931-5558950 | None:intergenic | 25.0% |
| ! | CTCGTTACAAAAATTTCATT+TGG | - | chr7.4:5561780-5561799 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | - | chr7.4:5558591-5558610 | None:intergenic | 25.0% |
| ! | GATAACAACTCCTAAATTAA+TGG | - | chr7.4:5560272-5560291 | None:intergenic | 25.0% |
| ! | GATAGTAGAATCTTATATTG+AGG | + | chr7.4:5561738-5561757 | MS.gene28835:intron | 25.0% |
| ! | GATTCTACTATCTAATTCAT+GGG | - | chr7.4:5561730-5561749 | None:intergenic | 25.0% |
| ! | TAAAAGACCTAGAAAACAAA+AGG | + | chr7.4:5562669-5562688 | MS.gene28835:CDS | 25.0% |
| ! | TAAACAATCATACATTAGAC+AGG | - | chr7.4:5562062-5562081 | None:intergenic | 25.0% |
| ! | TAAATAACTAAGGGTAATGT+TGG | + | chr7.4:5560687-5560706 | MS.gene28835:intron | 25.0% |
| ! | TAAGAAGAGAAATACTAACA+TGG | + | chr7.4:5561903-5561922 | MS.gene28835:CDS | 25.0% |
| ! | TACAATTTCAGAACACAAAA+TGG | - | chr7.4:5561100-5561119 | None:intergenic | 25.0% |
| ! | TACCAATACACCATTAATTT+AGG | + | chr7.4:5560259-5560278 | MS.gene28835:intron | 25.0% |
| ! | TATCAGCTATAACAACAAAA+CGG | - | chr7.4:5559522-5559541 | None:intergenic | 25.0% |
| ! | TATCCATCACTTTGAATATT+AGG | + | chr7.4:5560358-5560377 | MS.gene28835:intron | 25.0% |
| ! | TCTCCACAATAAATAACTAA+GGG | + | chr7.4:5560678-5560697 | MS.gene28835:intron | 25.0% |
| ! | TTAAAGGATCGATATTATAG+TGG | + | chr7.4:5559571-5559590 | MS.gene28835:CDS | 25.0% |
| ! | TTAAATCAAAGAAATTTGGG+GGG | - | chr7.4:5562124-5562143 | None:intergenic | 25.0% |
| ! | TTAACAAATGCAGTTAAAAC+AGG | - | chr7.4:5559322-5559341 | None:intergenic | 25.0% |
| ! | TTACCCTTAGTTATTTATTG+TGG | - | chr7.4:5560684-5560703 | None:intergenic | 25.0% |
| ! | TTTGAAAGTGACAGTTAAAT+AGG | + | chr7.4:5560738-5560757 | MS.gene28835:intron | 25.0% |
| !! | CCTATTCATTGCTATATTTT+TGG | + | chr7.4:5558928-5558947 | MS.gene28835:intron | 25.0% |
| !!! | AATTATTTGATTTGTGTGAG+AGG | + | chr7.4:5559488-5559507 | MS.gene28835:CDS | 25.0% |
| !!! | ATTATGTTTTTCAGGTTACT+TGG | + | chr7.4:5558668-5558687 | MS.gene28835:intron | 25.0% |
| !!! | TAATATTCAAAGTGATGGAT+AGG | - | chr7.4:5560359-5560378 | None:intergenic | 25.0% |
| !!! | TATTTAACTGTCACTTTCAA+AGG | - | chr7.4:5560739-5560758 | None:intergenic | 25.0% |
| !!! | TCACTTGTTAGAATTTTCAT+GGG | + | chr7.4:5562025-5562044 | MS.gene28835:intron | 25.0% |
| !!! | TGTCTAATTGTACAGTTTTT+TGG | + | chr7.4:5559053-5559072 | MS.gene28835:intron | 25.0% |
| !!! | TTCACTTGTTAGAATTTTCA+TGG | + | chr7.4:5562024-5562043 | MS.gene28835:intron | 25.0% |
| AAAAACATAATAACCCCGTT+TGG | - | chr7.4:5558659-5558678 | None:intergenic | 30.0% | |
| AAATATGAATTTCCGACCTT+TGG | - | chr7.4:5562238-5562257 | None:intergenic | 30.0% | |
| AAGTGACACTTAAAAAGGAA+CGG | - | chr7.4:5560543-5560562 | None:intergenic | 30.0% | |
| AATAAGCTGAAAAGGACTTA+TGG | - | chr7.4:5558583-5558602 | None:intergenic | 30.0% | |
| ACCTTTCAATTCTGATGATA+TGG | + | chr7.4:5559687-5559706 | MS.gene28835:intron | 30.0% | |
| ATAGGGAGTAATTACCAATT+TGG | + | chr7.4:5560806-5560825 | MS.gene28835:intron | 30.0% | |
| ATGATCTTCATCTTTACCAT+TGG | + | chr7.4:5558725-5558744 | MS.gene28835:CDS | 30.0% | |
| CATAAAAAGTTAAGGTAGTC+GGG | - | chr7.4:5561626-5561645 | None:intergenic | 30.0% | |
| CATTCATGTTTATAACCAGA+TGG | + | chr7.4:5561997-5562016 | MS.gene28835:intron | 30.0% | |
| CTCCTAAATTAATGGTGTAT+TGG | - | chr7.4:5560264-5560283 | None:intergenic | 30.0% | |
| CTCTCCACAATAAATAACTA+AGG | + | chr7.4:5560677-5560696 | MS.gene28835:intron | 30.0% | |
| CTTACAATAGAAGTCAATGA+AGG | - | chr7.4:5559180-5559199 | None:intergenic | 30.0% | |
| GAGTTAAATGACATGAATTG+TGG | - | chr7.4:5559632-5559651 | None:intergenic | 30.0% | |
| GCATAAAAAGTTAAGGTAGT+CGG | - | chr7.4:5561627-5561646 | None:intergenic | 30.0% | |
| GTAACAATTATTGAGTGTCT+TGG | - | chr7.4:5560584-5560603 | None:intergenic | 30.0% | |
| GTTTAGACATGAAAAATGAG+GGG | + | chr7.4:5559199-5559218 | MS.gene28835:intron | 30.0% | |
| TAGGGAGTAATTACCAATTT+GGG | + | chr7.4:5560807-5560826 | MS.gene28835:intron | 30.0% | |
| TAGGTAGATAAAGCAGAATA+AGG | - | chr7.4:5559442-5559461 | None:intergenic | 30.0% | |
| TATACCAATATACCTGTTTC+TGG | - | chr7.4:5561937-5561956 | None:intergenic | 30.0% | |
| TCCATATCATCAGAATTGAA+AGG | - | chr7.4:5559691-5559710 | None:intergenic | 30.0% | |
| TGATCTTCATCTTTACCATT+GGG | + | chr7.4:5558726-5558745 | MS.gene28835:CDS | 30.0% | |
| TTAAGATGATTATCCAAACG+GGG | + | chr7.4:5558643-5558662 | MS.gene28835:intron | 30.0% | |
| TTCATGGGTATTAAGAAAGA+TGG | - | chr7.4:5561715-5561734 | None:intergenic | 30.0% | |
| TTCCCTAATATTCAAAGTGA+TGG | - | chr7.4:5560364-5560383 | None:intergenic | 30.0% | |
| TTGAGTTTGACCATATGTTT+GGG | + | chr7.4:5561800-5561819 | MS.gene28835:intron | 30.0% | |
| ! | AGTTTCCCTTCTATTGTTTT+AGG | + | chr7.4:5562273-5562292 | MS.gene28835:intron | 30.0% |
| ! | ATGTATCAAGTTGTGATTGT+GGG | + | chr7.4:5559153-5559172 | MS.gene28835:intron | 30.0% |
| ! | TATGTATCAAGTTGTGATTG+TGG | + | chr7.4:5559152-5559171 | MS.gene28835:intron | 30.0% |
| ! | TCGGGAACTTTATTTGTATA+GGG | + | chr7.4:5562619-5562638 | MS.gene28835:intron | 30.0% |
| ! | TTTGACTTCACCTTAATGAT+AGG | - | chr7.4:5559835-5559854 | None:intergenic | 30.0% |
| !! | AATTGAGAAGCATCAATTGA+TGG | - | chr7.4:5558468-5558487 | None:intergenic | 30.0% |
| !! | ATGCATAAAACTGTTGTTTC+AGG | + | chr7.4:5562463-5562482 | MS.gene28835:intron | 30.0% |
| !! | ATTACTTGTTGTGAAATACG+TGG | + | chr7.4:5562143-5562162 | MS.gene28835:intron | 30.0% |
| !! | GATTTTGAAGATCAGAATTC+TGG | - | chr7.4:5561371-5561390 | None:intergenic | 30.0% |
| !! | TTTCTCTTGTTGTCTTGTTT+GGG | - | chr7.4:5560055-5560074 | None:intergenic | 30.0% |
| !! | TTTTCTCTTGTTGTCTTGTT+TGG | - | chr7.4:5560056-5560075 | None:intergenic | 30.0% |
| !!! | CACTTTTTAAGTGTCACTTT+TGG | - | chr7.4:5560778-5560797 | None:intergenic | 30.0% |
| !!! | GTTTTGTTGTTATAGCTGAT+AGG | + | chr7.4:5559521-5559540 | MS.gene28835:CDS | 30.0% |
| !!! | TTTTAGGTTTATGCACTTAC+TGG | + | chr7.4:5558423-5558442 | MS.gene28835:intron | 30.0% |
| AACAGGTTACTATCAACACA+TGG | - | chr7.4:5559957-5559976 | None:intergenic | 35.0% | |
| AAGTATTTGACAGATCCTGT+GGG | + | chr7.4:5559024-5559043 | MS.gene28835:intron | 35.0% | |
| AATTAGACATGATTACCCAC+AGG | - | chr7.4:5559042-5559061 | None:intergenic | 35.0% | |
| ACAAGAGAAAAGAGATGAAG+AGG | + | chr7.4:5560065-5560084 | MS.gene28835:CDS | 35.0% | |
| ACCAGACGTCATTTATTATG+AGG | - | chr7.4:5560146-5560165 | None:intergenic | 35.0% | |
| ACCTCCAAAATTCAACGAAT+CGG | - | chr7.4:5562363-5562382 | None:intergenic | 35.0% | |
| ACGAGCCTAAAACAATAGAA+GGG | - | chr7.4:5562281-5562300 | None:intergenic | 35.0% | |
| ACTTCATACATTTCTGCCAT+CGG | + | chr7.4:5560115-5560134 | MS.gene28835:intron | 35.0% | |
| AGGGAGTAATTACCAATTTG+GGG | + | chr7.4:5560808-5560827 | MS.gene28835:intron | 35.0% | |
| ATCATCTTTACGAGCAGAAT+TGG | - | chr7.4:5558710-5558729 | None:intergenic | 35.0% | |
| ATCATGTTAAGCAGAACACT+AGG | + | chr7.4:5561235-5561254 | MS.gene28835:intron | 35.0% | |
| ATCTCCAGAAACAGGTATAT+TGG | + | chr7.4:5561930-5561949 | MS.gene28835:intron | 35.0% | |
| ATGCATTGAACACTTGGTAA+AGG | - | chr7.4:5559412-5559431 | None:intergenic | 35.0% | |
| ATTGTAAGTGTCTGGCAATT+TGG | + | chr7.4:5561114-5561133 | MS.gene28835:intron | 35.0% | |
| CAAAAAGAATAGCCGAGTTA+CGG | + | chr7.4:5560203-5560222 | MS.gene28835:CDS | 35.0% | |
| CCAGACGTCATTTATTATGA+GGG | - | chr7.4:5560145-5560164 | None:intergenic | 35.0% | |
| CTACATTGAAAAGAGAGAAC+AGG | - | chr7.4:5559974-5559993 | None:intergenic | 35.0% | |
| GAATCAGCAACATTCTATAC+TGG | + | chr7.4:5562084-5562103 | MS.gene28835:intron | 35.0% | |
| GACTGTCGTTAGACAATTTA+GGG | - | chr7.4:5561171-5561190 | None:intergenic | 35.0% | |
| GCAAGCTGCATAAAAAGTTA+AGG | - | chr7.4:5561634-5561653 | None:intergenic | 35.0% | |
| GGAGTTGTTATCATGATTCA+AGG | + | chr7.4:5560280-5560299 | MS.gene28835:intron | 35.0% | |
| GTTGAGTTTGACCATATGTT+TGG | + | chr7.4:5561799-5561818 | MS.gene28835:intron | 35.0% | |
| TAACAAGTGAAATCACCATC+TGG | - | chr7.4:5562015-5562034 | None:intergenic | 35.0% | |
| TAATTCATTTGTCTCCTCCT+TGG | - | chr7.4:5559473-5559492 | None:intergenic | 35.0% | |
| TGACTGTCGTTAGACAATTT+AGG | - | chr7.4:5561172-5561191 | None:intergenic | 35.0% | |
| TGCAACACATCCTATCATTA+AGG | + | chr7.4:5559822-5559841 | MS.gene28835:CDS | 35.0% | |
| TTACTATCAACACATGGCAA+TGG | - | chr7.4:5559951-5559970 | None:intergenic | 35.0% | |
| TTATTATGAGGGTAAACCGA+TGG | - | chr7.4:5560134-5560153 | None:intergenic | 35.0% | |
| TTCAGCTTCGTGTATATTTG+AGG | + | chr7.4:5561501-5561520 | MS.gene28835:intron | 35.0% | |
| TTGTAAGTGTCTGGCAATTT+GGG | + | chr7.4:5561115-5561134 | MS.gene28835:intron | 35.0% | |
| ! | AAAACTTCGTTTTGTAGCAC+TGG | + | chr7.4:5561339-5561358 | MS.gene28835:intron | 35.0% |
| ! | AAAGTATTTGACAGATCCTG+TGG | + | chr7.4:5559023-5559042 | MS.gene28835:intron | 35.0% |
| ! | ACGGGGTTATTATGTTTTTC+AGG | + | chr7.4:5558660-5558679 | MS.gene28835:intron | 35.0% |
| ! | ACTTTATTTGTATAGGGGCA+TGG | + | chr7.4:5562625-5562644 | MS.gene28835:intron | 35.0% |
| ! | ATTTGGGGCAACAAAATTTG+TGG | + | chr7.4:5560823-5560842 | MS.gene28835:intron | 35.0% |
| ! | CAAATTTTGTTGCCCCAAAT+TGG | - | chr7.4:5560823-5560842 | None:intergenic | 35.0% |
| ! | CGGGAACTTTATTTGTATAG+GGG | + | chr7.4:5562620-5562639 | MS.gene28835:intron | 35.0% |
| ! | CTCGGGAACTTTATTTGTAT+AGG | + | chr7.4:5562618-5562637 | MS.gene28835:intron | 35.0% |
| ! | CTGTTCTCTCTTTTCAATGT+AGG | + | chr7.4:5559972-5559991 | MS.gene28835:intron | 35.0% |
| ! | TTCTTTTGCCAAGTACAACA+AGG | + | chr7.4:5558870-5558889 | MS.gene28835:CDS | 35.0% |
| ! | TTTAGCTACCTTGTTGTACT+TGG | - | chr7.4:5558881-5558900 | None:intergenic | 35.0% |
| !! | ATTCCCGATTCGTTGAATTT+TGG | + | chr7.4:5562356-5562375 | MS.gene28835:CDS | 35.0% |
| !! | GTTCTGAAATTGTAAGTGTC+TGG | + | chr7.4:5561106-5561125 | MS.gene28835:intron | 35.0% |
| !!! | AGGTTTTCTCTGAGATTCTT+TGG | - | chr7.4:5558297-5558316 | None:intergenic | 35.0% |
| !!! | GGTTTTCTCTGAGATTCTTT+GGG | - | chr7.4:5558296-5558315 | None:intergenic | 35.0% |
| !!! | TTATGTGTCGCTTCTTTTTC+AGG | + | chr7.4:5558810-5558829 | MS.gene28835:intron | 35.0% |
| !!! | TTTTTCAGGTTACTTGGCAA+TGG | + | chr7.4:5558674-5558693 | MS.gene28835:intron | 35.0% |
| AAGGAGATACAGTTTCACCA+GGG | - | chr7.4:5560985-5561004 | None:intergenic | 40.0% | |
| AATGGACCTGGTTATTTGCA+AGG | + | chr7.4:5559246-5559265 | MS.gene28835:intron | 40.0% | |
| ACAAGAAATGGAGCGAAAAC+GGG | + | chr7.4:5560011-5560030 | MS.gene28835:CDS | 40.0% | |
| ACCTAGAAAACAAAAGGCCT+CGG | + | chr7.4:5562675-5562694 | MS.gene28835:CDS | 40.0% | |
| AGCAAACATTGCAAGATCTC+GGG | + | chr7.4:5561594-5561613 | MS.gene28835:CDS | 40.0% | |
| ATCACGGAAAGATGAACCTT+CGG | - | chr7.4:5562188-5562207 | None:intergenic | 40.0% | |
| ATGATGCATTCTGTGATTCC+AGG | + | chr7.4:5561826-5561845 | MS.gene28835:intron | 40.0% | |
| CAAAAAGGACCAAAAACGCA+AGG | + | chr7.4:5562498-5562517 | MS.gene28835:CDS | 40.0% | |
| CACAAGAAATGGAGCGAAAA+CGG | + | chr7.4:5560010-5560029 | MS.gene28835:CDS | 40.0% | |
| CACGAGCCTAAAACAATAGA+AGG | - | chr7.4:5562282-5562301 | None:intergenic | 40.0% | |
| CATCATCAAATACACAGACG+AGG | + | chr7.4:5558993-5559012 | MS.gene28835:CDS | 40.0% | |
| CCCTCATAATAAATGACGTC+TGG | + | chr7.4:5560142-5560161 | MS.gene28835:intron | 40.0% | |
| CCTCCAAAATTCAACGAATC+GGG | - | chr7.4:5562362-5562381 | None:intergenic | 40.0% | |
| CTACTGACACATTTGTTTCG+TGG | + | chr7.4:5562311-5562330 | MS.gene28835:intron | 40.0% | |
| CTGCTTTATCTACCTAGATG+TGG | + | chr7.4:5559446-5559465 | MS.gene28835:intron | 40.0% | |
| GAATCTCAGAGAAAACCTGA+TGG | + | chr7.4:5558299-5558318 | MS.gene28835:CDS | 40.0% | |
| GAATGTGCAACTTCCACAAA+TGG | + | chr7.4:5561006-5561025 | MS.gene28835:CDS | 40.0% | |
| GAGCAAACATTGCAAGATCT+CGG | + | chr7.4:5561593-5561612 | MS.gene28835:CDS | 40.0% | |
| GCAAAAGAATAGTCTCCAGT+AGG | - | chr7.4:5558859-5558878 | None:intergenic | 40.0% | |
| GCATCATGAACCCAAACATA+TGG | - | chr7.4:5561813-5561832 | None:intergenic | 40.0% | |
| GGTTACTGAACAGTCTCAAT+TGG | + | chr7.4:5560916-5560935 | MS.gene28835:intron | 40.0% | |
| TAGGTTTATGCACTTACTGG+TGG | + | chr7.4:5558426-5558445 | MS.gene28835:intron | 40.0% | |
| TGACACATTTGTTTCGTGGT+GGG | + | chr7.4:5562315-5562334 | MS.gene28835:intron | 40.0% | |
| TGACACTTAAAAAGGAACGG+AGG | - | chr7.4:5560540-5560559 | None:intergenic | 40.0% | |
| TTACGAGCAGAATTGGTGAA+AGG | - | chr7.4:5558703-5558722 | None:intergenic | 40.0% | |
| ! | CCAGGTAAATTTGAAACCGA+GGG | + | chr7.4:5561844-5561863 | MS.gene28835:intron | 40.0% |
| ! | GCATCAATTGATGGCATAAG+AGG | - | chr7.4:5558459-5558478 | None:intergenic | 40.0% |
| ! | GTTCAAACCTTTTCGTGAGT+AGG | - | chr7.4:5558504-5558523 | None:intergenic | 40.0% |
| ! | TCAATTGATGGCATAAGAGG+TGG | - | chr7.4:5558456-5558475 | None:intergenic | 40.0% |
| ! | TCCAGGTAAATTTGAAACCG+AGG | + | chr7.4:5561843-5561862 | MS.gene28835:intron | 40.0% |
| ! | TCTGCACAAACAGCTTTTGT+TGG | - | chr7.4:5561872-5561891 | None:intergenic | 40.0% |
| !! | AAACTGTTGTTTCAGGCGAA+AGG | + | chr7.4:5562470-5562489 | MS.gene28835:intron | 40.0% |
| !! | AACTGTTGTTTCAGGCGAAA+GGG | + | chr7.4:5562471-5562490 | MS.gene28835:intron | 40.0% |
| !! | GTACTATTACTGGTTGGTCT+CGG | + | chr7.4:5562600-5562619 | MS.gene28835:intron | 40.0% |
| !! | GTAGAAGCATTATCTGCAGA+AGG | - | chr7.4:5561037-5561056 | None:intergenic | 40.0% |
| !! | TACTATTACTGGTTGGTCTC+GGG | + | chr7.4:5562601-5562620 | MS.gene28835:intron | 40.0% |
| !! | TTTCAGGTTCGAGTAGTCAA+TGG | + | chr7.4:5558826-5558845 | MS.gene28835:intron | 40.0% |
| !! | TTTCTCTGAGATTCTTTGGG+AGG | - | chr7.4:5558293-5558312 | None:intergenic | 40.0% |
| !!! | ATTGTTTTAGGCTCGTGGTT+TGG | + | chr7.4:5562285-5562304 | MS.gene28835:intron | 40.0% |
| !!! | CTTCTATTGTTTTAGGCTCG+TGG | + | chr7.4:5562280-5562299 | MS.gene28835:intron | 40.0% |
| AAAGCCTCCTACTCACGAAA+AGG | + | chr7.4:5558494-5558513 | MS.gene28835:CDS | 45.0% | |
| AAGAATAGCCGAGTTACGGA+TGG | + | chr7.4:5560207-5560226 | MS.gene28835:CDS | 45.0% | |
| ACCCGAAGGAAATTTGTGCT+AGG | + | chr7.4:5561297-5561316 | MS.gene28835:intron | 45.0% | |
| AGAGGTCCTTGCAAATAACC+AGG | - | chr7.4:5559255-5559274 | None:intergenic | 45.0% | |
| ATCTACCTAGATGTGGACCA+AGG | + | chr7.4:5559453-5559472 | MS.gene28835:intron | 45.0% | |
| ATCTGTACTTGCACATGCCT+GGG | + | chr7.4:5560870-5560889 | MS.gene28835:intron | 45.0% | |
| ATGGACGCGAAGGATATTCT+TGG | + | chr7.4:5558218-5558237 | MS.gene28835:CDS | 45.0% | |
| ATGGCTGAATCTCCAGAAAC+AGG | + | chr7.4:5561922-5561941 | MS.gene28835:CDS | 45.0% | |
| CAAACTCAACTGCTGGAGTT+CGG | + | chr7.4:5561555-5561574 | MS.gene28835:CDS | 45.0% | |
| CAAAGAAATTTGGGGGGTGA+GGG | - | chr7.4:5562118-5562137 | None:intergenic | 45.0% | |
| CAACACATGGCAATGGCTTA+AGG | - | chr7.4:5559944-5559963 | None:intergenic | 45.0% | |
| CAAGCTTCAAACTCAACTGC+TGG | + | chr7.4:5561548-5561567 | MS.gene28835:CDS | 45.0% | |
| CCCGAAGGAAATTTGTGCTA+GGG | + | chr7.4:5561298-5561317 | MS.gene28835:intron | 45.0% | |
| CCCTAGCACAAATTTCCTTC+GGG | - | chr7.4:5561301-5561320 | None:intergenic | 45.0% | |
| CCCTCGGTTTCAAATTTACC+TGG | - | chr7.4:5561847-5561866 | None:intergenic | 45.0% | |
| CCTCTAACAGAGCTACTTGA+CGG | - | chr7.4:5561206-5561225 | None:intergenic | 45.0% | |
| CTGACACATTTGTTTCGTGG+TGG | + | chr7.4:5562314-5562333 | MS.gene28835:intron | 45.0% | |
| CTGATAGGTTCCCATCATCT+CGG | + | chr7.4:5559536-5559555 | MS.gene28835:CDS | 45.0% | |
| CTGGAGTTCGGACTATCAAA+CGG | + | chr7.4:5561567-5561586 | MS.gene28835:CDS | 45.0% | |
| CTTAGAAGCCATCCGTAACT+CGG | - | chr7.4:5560218-5560237 | None:intergenic | 45.0% | |
| GAAAATGCGCACAGCATACT+AGG | - | chr7.4:5560392-5560411 | None:intergenic | 45.0% | |
| GAAGGAGATACAGTTTCACC+AGG | - | chr7.4:5560986-5561005 | None:intergenic | 45.0% | |
| GAAGGTTCATCTTTCCGTGA+TGG | + | chr7.4:5562187-5562206 | MS.gene28835:CDS | 45.0% | |
| GACATATGCACTCGAGCAAA+TGG | + | chr7.4:5561523-5561542 | MS.gene28835:CDS | 45.0% | |
| GACGTAAGCACTTGTGAAGA+GGG | + | chr7.4:5558547-5558566 | MS.gene28835:intron | 45.0% | |
| GCAAACATTGCAAGATCTCG+GGG | + | chr7.4:5561595-5561614 | MS.gene28835:CDS | 45.0% | |
| GCAGAAGGAACAACCATTTG+TGG | - | chr7.4:5561022-5561041 | None:intergenic | 45.0% | |
| GCATATTGTGACTGACCCAA+TGG | - | chr7.4:5558744-5558763 | None:intergenic | 45.0% | |
| GCCCTAGCACAAATTTCCTT+CGG | - | chr7.4:5561302-5561321 | None:intergenic | 45.0% | |
| GTCAATGGTGTTCTACCTAC+TGG | + | chr7.4:5558841-5558860 | MS.gene28835:CDS | 45.0% | |
| GTGCAATATAAAGAGGCCGA+AGG | + | chr7.4:5562169-5562188 | MS.gene28835:CDS | 45.0% | |
| GTGGCAGGTGCAATATAAAG+AGG | + | chr7.4:5562162-5562181 | MS.gene28835:intron | 45.0% | |
| TCAAAGAAATTTGGGGGGTG+AGG | - | chr7.4:5562119-5562138 | None:intergenic | 45.0% | |
| TCGGACTGTAGAGGAGTTAA+AGG | + | chr7.4:5559555-5559574 | MS.gene28835:CDS | 45.0% | |
| TGACGTAAGCACTTGTGAAG+AGG | + | chr7.4:5558546-5558565 | MS.gene28835:intron | 45.0% | |
| TGATGCAGAAGTTGCAGAGA+GGG | + | chr7.4:5560955-5560974 | MS.gene28835:CDS | 45.0% | |
| TGGAGTTCGGACTATCAAAC+GGG | + | chr7.4:5561568-5561587 | MS.gene28835:CDS | 45.0% | |
| TGTGGAAGTTGCACATTCGA+AGG | - | chr7.4:5561004-5561023 | None:intergenic | 45.0% | |
| ! | ACAGCTTTTGTTGGAACCCT+CGG | - | chr7.4:5561863-5561882 | None:intergenic | 45.0% |
| ! | ATCACTAGTCTCTAACCCGA+AGG | + | chr7.4:5561283-5561302 | MS.gene28835:intron | 45.0% |
| ! | CAAACCTTTTCGTGAGTAGG+AGG | - | chr7.4:5558501-5558520 | None:intergenic | 45.0% |
| ! | CTTGTTGTGAAATACGTGGC+AGG | + | chr7.4:5562147-5562166 | MS.gene28835:intron | 45.0% |
| ! | CTTTTATGAGCTGCTGTAGG+TGG | - | chr7.4:5562655-5562674 | None:intergenic | 45.0% |
| ! | GGTCTTTTATGAGCTGCTGT+AGG | - | chr7.4:5562658-5562677 | None:intergenic | 45.0% |
| ! | GTGCGCATTTTCGTTTGCAT+GGG | + | chr7.4:5560400-5560419 | MS.gene28835:intron | 45.0% |
| ! | TACTCTAGCTTCTCTTCGCA+TGG | + | chr7.4:5561054-5561073 | MS.gene28835:CDS | 45.0% |
| ! | TGTGCGCATTTTCGTTTGCA+TGG | + | chr7.4:5560399-5560418 | MS.gene28835:intron | 45.0% |
| ! | TGTGGTGTACCTTGCGTTTT+TGG | - | chr7.4:5562510-5562529 | None:intergenic | 45.0% |
| ! | TTTGTTTCGTGGTGGGAATC+AGG | + | chr7.4:5562322-5562341 | MS.gene28835:intron | 45.0% |
| !! | CCCGATTCGTTGAATTTTGG+AGG | + | chr7.4:5562359-5562378 | MS.gene28835:CDS | 45.0% |
| !! | CTTGTTGTCTTGTTTGGGAG+AGG | - | chr7.4:5560050-5560069 | None:intergenic | 45.0% |
| !!! | TCCGAGGCCTTTTGTTTTCT+AGG | - | chr7.4:5562679-5562698 | None:intergenic | 45.0% |
| ACATGGCAATGGCTTAAGGC+AGG | - | chr7.4:5559940-5559959 | None:intergenic | 50.0% | |
| AGGATGTGTTGCAATGTCCC+CGG | - | chr7.4:5559815-5559834 | None:intergenic | 50.0% | |
| CCTCTACAGTCCGAGATGAT+GGG | - | chr7.4:5559549-5559568 | None:intergenic | 50.0% | |
| CGAGTTACGGATGGCTTCTA+AGG | + | chr7.4:5560216-5560235 | MS.gene28835:CDS | 50.0% | |
| CTAACAGAGCTACTTGACGG+AGG | - | chr7.4:5561203-5561222 | None:intergenic | 50.0% | |
| CTGATGCAGAAGTTGCAGAG+AGG | + | chr7.4:5560954-5560973 | MS.gene28835:CDS | 50.0% | |
| GATCTGTACTTGCACATGCC+TGG | + | chr7.4:5560869-5560888 | MS.gene28835:intron | 50.0% | |
| GTCCCTGTCATGTAGTGTTG+CGG | + | chr7.4:5559761-5559780 | MS.gene28835:intron | 50.0% | |
| TACCTAGATGTGGACCAAGG+AGG | + | chr7.4:5559456-5559475 | MS.gene28835:intron | 50.0% | |
| TCCCTGTCATGTAGTGTTGC+GGG | + | chr7.4:5559762-5559781 | MS.gene28835:intron | 50.0% | |
| TCCTCTACAGTCCGAGATGA+TGG | - | chr7.4:5559550-5559569 | None:intergenic | 50.0% | |
| TGAAACACCAGGCACACCAA+AGG | + | chr7.4:5562219-5562238 | MS.gene28835:CDS | 50.0% | |
| TGGGGTGCAGTGTACAAAAG+AGG | - | chr7.4:5559273-5559292 | None:intergenic | 50.0% | |
| ! | AGGCGAAAGGGTTGGCAAAA+AGG | + | chr7.4:5562483-5562502 | MS.gene28835:intron | 50.0% |
| ! | AGTAGCTCTGTTAGAGGTGC+TGG | + | chr7.4:5561209-5561228 | MS.gene28835:intron | 50.0% |
| ! | CCGTCAAGTAGCTCTGTTAG+AGG | + | chr7.4:5561203-5561222 | MS.gene28835:intron | 50.0% |
| ! | CGCATTTTCGTTTGCATGGG+AGG | + | chr7.4:5560403-5560422 | MS.gene28835:intron | 50.0% |
| ! | GCGGGCTATATTACTTGCCA+GGG | + | chr7.4:5559780-5559799 | MS.gene28835:CDS | 50.0% |
| ! | GTTGTTTCAGGCGAAAGGGT+TGG | + | chr7.4:5562475-5562494 | MS.gene28835:intron | 50.0% |
| ! | TCTTGTTTGGGAGAGGACCA+TGG | - | chr7.4:5560043-5560062 | None:intergenic | 50.0% |
| ! | TGCGGGCTATATTACTTGCC+AGG | + | chr7.4:5559779-5559798 | MS.gene28835:CDS | 50.0% |
| ACACCAGGCACACCAAAGGT+CGG | + | chr7.4:5562223-5562242 | MS.gene28835:intron | 55.0% | |
| ACCTCGCGTGAAATGCCATC+AGG | - | chr7.4:5558317-5558336 | None:intergenic | 55.0% | |
| ACCTGATGGCATTTCACGCG+AGG | + | chr7.4:5558313-5558332 | MS.gene28835:CDS | 55.0% | |
| AGCCCGCAACACTACATGAC+AGG | - | chr7.4:5559767-5559786 | None:intergenic | 55.0% | |
| CCCATCATCTCGGACTGTAG+AGG | + | chr7.4:5559546-5559565 | MS.gene28835:CDS | 55.0% | |
| CTCCTCCTTGGTCCACATCT+AGG | - | chr7.4:5559461-5559480 | None:intergenic | 55.0% | |
| GCCCGCAACACTACATGACA+GGG | - | chr7.4:5559766-5559785 | None:intergenic | 55.0% | |
| ! | TTTCCGACCTTTGGTGTGCC+TGG | - | chr7.4:5562229-5562248 | None:intergenic | 55.0% |
| CTTGCCAGGGCTGCATCTTC+CGG | + | chr7.4:5559793-5559812 | MS.gene28835:CDS | 60.0% | |
| TTGCCAGGGCTGCATCTTCC+GGG | + | chr7.4:5559794-5559813 | MS.gene28835:CDS | 60.0% | |
| ! | GCGAAAACGGGCACTGTCCA+TGG | + | chr7.4:5560023-5560042 | MS.gene28835:CDS | 60.0% |
| GTTGCAGAGAGGGCTGTCCC+TGG | + | chr7.4:5560965-5560984 | MS.gene28835:CDS | 65.0% | |
| TGCCAGGGCTGCATCTTCCG+GGG | + | chr7.4:5559795-5559814 | MS.gene28835:CDS | 65.0% | |
| GTCCCCGGAAGATGCAGCCC+TGG | - | chr7.4:5559800-5559819 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5558218 | 5562705 | 5558218 | ID=MS.gene28835 |
| chr7.4 | mRNA | 5558218 | 5562705 | 5558218 | ID=MS.gene28835.t1;Parent=MS.gene28835 |
| chr7.4 | exon | 5558218 | 5558334 | 5558218 | ID=MS.gene28835.t1.exon1;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5558218 | 5558334 | 5558218 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5558429 | 5558515 | 5558429 | ID=MS.gene28835.t1.exon2;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5558429 | 5558515 | 5558429 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5558682 | 5558747 | 5558682 | ID=MS.gene28835.t1.exon3;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5558682 | 5558747 | 5558682 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5558832 | 5558891 | 5558832 | ID=MS.gene28835.t1.exon4;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5558832 | 5558891 | 5558832 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5558985 | 5559041 | 5558985 | ID=MS.gene28835.t1.exon5;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5558985 | 5559041 | 5558985 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5559463 | 5559592 | 5559463 | ID=MS.gene28835.t1.exon6;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5559463 | 5559592 | 5559463 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5559776 | 5559843 | 5559776 | ID=MS.gene28835.t1.exon7;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5559776 | 5559843 | 5559776 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5559994 | 5560086 | 5559994 | ID=MS.gene28835.t1.exon8;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5559994 | 5560086 | 5559994 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5560190 | 5560237 | 5560190 | ID=MS.gene28835.t1.exon9;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5560190 | 5560237 | 5560190 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5560917 | 5561075 | 5560917 | ID=MS.gene28835.t1.exon10;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5560917 | 5561075 | 5560917 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5561506 | 5561616 | 5561506 | ID=MS.gene28835.t1.exon11;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5561506 | 5561616 | 5561506 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5561848 | 5561943 | 5561848 | ID=MS.gene28835.t1.exon12;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5561848 | 5561943 | 5561848 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5562169 | 5562240 | 5562169 | ID=MS.gene28835.t1.exon13;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5562169 | 5562240 | 5562169 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5562344 | 5562380 | 5562344 | ID=MS.gene28835.t1.exon14;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5562344 | 5562380 | 5562344 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5562485 | 5562519 | 5562485 | ID=MS.gene28835.t1.exon15;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5562485 | 5562519 | 5562485 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| chr7.4 | exon | 5562640 | 5562705 | 5562640 | ID=MS.gene28835.t1.exon16;Parent=MS.gene28835.t1 |
| chr7.4 | CDS | 5562640 | 5562705 | 5562640 | ID=cds.MS.gene28835.t1;Parent=MS.gene28835.t1 |
| Gene Sequence |
| Protein sequence |
