Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29381.t1 | XP_003601227.1 | 97.3 | 329 | 9 | 0 | 1 | 329 | 1 | 329 | 8.80E-175 | 622.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29381.t1 | Q6RVV4 | 45.2 | 312 | 167 | 2 | 13 | 324 | 9 | 316 | 5.6e-69 | 262.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29381.t1 | G7J4W0 | 97.3 | 329 | 9 | 0 | 1 | 329 | 1 | 329 | 6.3e-175 | 622.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene29381 | 0.819957 | 8.84E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene29381 | 0.812846 | 3.45E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene29381 | 0.867061 | 1.81E-65 | -1.69E-46 |
| MS.gene049910 | MS.gene29381 | 0.822839 | 1.91E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene29381 | 0.843469 | 1.37E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene29381 | -0.815659 | 8.26E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene29381 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene29381 | 0.819397 | 1.19E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene29381 | 0.811889 | 5.59E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene29381 | 0.807289 | 5.44E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene29381 | 0.826539 | 2.57E-54 | -1.69E-46 |
| MS.gene051662 | MS.gene29381 | 0.852164 | 5.52E-61 | -1.69E-46 |
| MS.gene051663 | MS.gene29381 | 0.85767 | 1.39E-62 | -1.69E-46 |
| MS.gene051860 | MS.gene29381 | 0.83153 | 1.58E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene29381 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene29381 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene29381 | 0.884423 | 1.94E-71 | -1.69E-46 |
| MS.gene054473 | MS.gene29381 | 0.841274 | 5.25E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene29381 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene054667 | MS.gene29381 | 0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene29381 | 0.816037 | 6.80E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene29381 | 0.83196 | 1.24E-55 | -1.69E-46 |
| MS.gene054983 | MS.gene29381 | 0.832212 | 1.08E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene29381 | 0.83588 | 1.30E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene29381 | 0.82799 | 1.15E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene29381 | 0.844295 | 8.26E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene29381 | 0.867547 | 1.26E-65 | -1.69E-46 |
| MS.gene05553 | MS.gene29381 | 0.80835 | 3.23E-50 | -1.69E-46 |
| MS.gene055712 | MS.gene29381 | 0.862936 | 3.56E-64 | -1.69E-46 |
| MS.gene056451 | MS.gene29381 | 0.807618 | 4.63E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene29381 | 0.832042 | 1.18E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene29381 | 0.837216 | 5.93E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene29381 | 0.832994 | 6.88E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene29381 | 0.825045 | 5.81E-54 | -1.69E-46 |
| MS.gene057245 | MS.gene29381 | 0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene057260 | MS.gene29381 | 0.819887 | 9.17E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene29381 | 0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene29381 | 0.849048 | 4.15E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene29381 | 0.846347 | 2.30E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene29381 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene29381 | 0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene29381 | 0.827388 | 1.61E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene29381 | 0.849806 | 2.55E-60 | -1.69E-46 |
| MS.gene059518 | MS.gene29381 | 0.830973 | 2.17E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene29381 | 0.808825 | 2.56E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene29381 | 0.816339 | 5.82E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene29381 | 0.851644 | 7.76E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene29381 | 0.822329 | 2.51E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene29381 | 0.811168 | 8.01E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene29381 | 0.850869 | 1.28E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29381 | MS.gene49118 | PPI |
| MS.gene29381 | MS.gene061158 | PPI |
| MS.gene006263 | MS.gene29381 | PPI |
| MS.gene29381 | MS.gene49120 | PPI |
| MS.gene29381 | MS.gene34138 | PPI |
| MS.gene29381 | MS.gene34141 | PPI |
| MS.gene29381 | MS.gene49117 | PPI |
| MS.gene29381 | MS.gene006265 | PPI |
| MS.gene29381 | MS.gene006264 | PPI |
| MS.gene29381 | MS.gene061157 | PPI |
| MS.gene29381 | MS.gene34140 | PPI |
| MS.gene29381 | MS.gene061155 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29381.t1 | MTR_3g077410 | 97.264 | 329 | 9 | 0 | 1 | 329 | 1 | 329 | 0.0 | 664 |
| MS.gene29381.t1 | MTR_4g105310 | 83.030 | 330 | 56 | 0 | 1 | 330 | 12 | 341 | 0.0 | 578 |
| MS.gene29381.t1 | MTR_4g105310 | 82.283 | 254 | 45 | 0 | 1 | 254 | 12 | 265 | 1.33e-157 | 441 |
| MS.gene29381.t1 | MTR_8g099995 | 52.615 | 325 | 150 | 2 | 1 | 323 | 1 | 323 | 1.31e-121 | 353 |
| MS.gene29381.t1 | MTR_7g099850 | 49.536 | 323 | 158 | 3 | 1 | 322 | 1 | 319 | 7.39e-105 | 310 |
| MS.gene29381.t1 | MTR_1g068970 | 47.826 | 322 | 164 | 2 | 1 | 322 | 1 | 318 | 5.05e-103 | 305 |
| MS.gene29381.t1 | MTR_8g098415 | 45.779 | 308 | 163 | 2 | 7 | 314 | 2 | 305 | 2.64e-95 | 285 |
| MS.gene29381.t1 | MTR_8g098415 | 45.779 | 308 | 163 | 2 | 7 | 314 | 2 | 305 | 4.08e-95 | 285 |
| MS.gene29381.t1 | MTR_1g100395 | 47.756 | 312 | 159 | 2 | 13 | 324 | 8 | 315 | 9.46e-94 | 281 |
| MS.gene29381.t1 | MTR_6g053550 | 47.742 | 310 | 157 | 2 | 14 | 321 | 17 | 323 | 7.35e-92 | 277 |
| MS.gene29381.t1 | MTR_1g100305 | 44.872 | 312 | 168 | 2 | 13 | 324 | 8 | 315 | 5.96e-91 | 274 |
| MS.gene29381.t1 | MTR_1g100335 | 44.872 | 312 | 168 | 2 | 13 | 324 | 8 | 315 | 2.76e-87 | 265 |
| MS.gene29381.t1 | MTR_1g100315 | 43.910 | 312 | 171 | 2 | 13 | 324 | 8 | 315 | 7.40e-86 | 261 |
| MS.gene29381.t1 | MTR_1g068970 | 44.841 | 252 | 138 | 1 | 71 | 322 | 1 | 251 | 5.07e-74 | 229 |
| MS.gene29381.t1 | MTR_6g053600 | 47.547 | 265 | 134 | 3 | 15 | 277 | 4 | 265 | 5.16e-74 | 230 |
| MS.gene29381.t1 | MTR_8g098415 | 44.578 | 249 | 137 | 1 | 66 | 314 | 1 | 248 | 6.79e-74 | 229 |
| MS.gene29381.t1 | MTR_1g100335 | 46.774 | 248 | 129 | 1 | 13 | 260 | 8 | 252 | 5.76e-69 | 217 |
| MS.gene29381.t1 | MTR_1g100335 | 45.968 | 248 | 130 | 2 | 13 | 260 | 8 | 251 | 1.02e-68 | 216 |
| MS.gene29381.t1 | MTR_8g098415 | 47.945 | 219 | 111 | 1 | 7 | 225 | 2 | 217 | 1.44e-65 | 206 |
| MS.gene29381.t1 | MTR_8g022500 | 63.964 | 111 | 15 | 1 | 42 | 152 | 431 | 516 | 4.02e-33 | 128 |
| MS.gene29381.t1 | MTR_6g041980 | 29.924 | 264 | 168 | 7 | 37 | 298 | 66 | 314 | 2.25e-28 | 112 |
| MS.gene29381.t1 | MTR_3g091070 | 30.921 | 304 | 169 | 11 | 35 | 321 | 38 | 317 | 1.42e-27 | 110 |
| MS.gene29381.t1 | MTR_3g009190 | 29.642 | 307 | 193 | 8 | 32 | 321 | 57 | 357 | 5.66e-27 | 109 |
| MS.gene29381.t1 | MTR_3g009190 | 29.642 | 307 | 193 | 8 | 32 | 321 | 75 | 375 | 7.89e-27 | 109 |
| MS.gene29381.t1 | MTR_6g453040 | 29.316 | 307 | 194 | 8 | 32 | 321 | 35 | 335 | 1.38e-26 | 108 |
| MS.gene29381.t1 | MTR_2g079710 | 27.070 | 314 | 193 | 10 | 39 | 321 | 88 | 396 | 3.73e-24 | 102 |
| MS.gene29381.t1 | MTR_3g009190 | 29.252 | 294 | 185 | 8 | 45 | 321 | 69 | 356 | 7.30e-24 | 100 |
| MS.gene29381.t1 | MTR_6g081020 | 29.316 | 307 | 183 | 9 | 38 | 321 | 62 | 357 | 1.45e-23 | 100 |
| MS.gene29381.t1 | MTR_6g041980 | 29.082 | 196 | 129 | 4 | 37 | 230 | 66 | 253 | 8.27e-20 | 87.8 |
| MS.gene29381.t1 | MTR_4g087460 | 28.333 | 300 | 167 | 7 | 40 | 305 | 24 | 309 | 1.15e-16 | 79.7 |
| MS.gene29381.t1 | MTR_6g453040 | 30.392 | 204 | 127 | 4 | 32 | 224 | 57 | 256 | 1.03e-15 | 76.6 |
| MS.gene29381.t1 | MTR_1g051165 | 30.734 | 218 | 115 | 7 | 41 | 245 | 20 | 214 | 2.99e-14 | 72.4 |
| MS.gene29381.t1 | MTR_4g058840 | 27.189 | 217 | 135 | 5 | 36 | 248 | 12 | 209 | 3.31e-14 | 72.0 |
| MS.gene29381.t1 | MTR_4g058820 | 27.189 | 217 | 135 | 5 | 36 | 248 | 12 | 209 | 3.31e-14 | 72.0 |
| MS.gene29381.t1 | MTR_4g058810 | 27.650 | 217 | 134 | 7 | 36 | 248 | 12 | 209 | 8.81e-14 | 70.9 |
| MS.gene29381.t1 | MTR_7g076660 | 27.740 | 292 | 150 | 11 | 40 | 292 | 9 | 278 | 2.99e-13 | 69.3 |
| MS.gene29381.t1 | MTR_7g076660 | 27.740 | 292 | 150 | 11 | 40 | 292 | 10 | 279 | 3.39e-13 | 69.3 |
| MS.gene29381.t1 | MTR_6g453040 | 29.474 | 190 | 119 | 4 | 32 | 210 | 57 | 242 | 1.03e-12 | 67.4 |
| MS.gene29381.t1 | MTR_8g031610 | 25.402 | 311 | 160 | 12 | 38 | 299 | 5 | 292 | 1.46e-12 | 67.4 |
| MS.gene29381.t1 | MTR_1g100345 | 39.437 | 71 | 43 | 0 | 38 | 108 | 1 | 71 | 6.69e-12 | 61.2 |
| MS.gene29381.t1 | MTR_5g062280 | 25.660 | 265 | 143 | 8 | 39 | 255 | 8 | 266 | 9.73e-12 | 65.1 |
| MS.gene29381.t1 | MTR_4g052340 | 28.448 | 232 | 136 | 6 | 37 | 264 | 16 | 221 | 1.88e-11 | 63.9 |
| MS.gene29381.t1 | MTR_7g076655 | 26.531 | 294 | 151 | 12 | 40 | 292 | 9 | 278 | 2.66e-11 | 63.9 |
| MS.gene29381.t1 | MTR_1g031180 | 25.939 | 293 | 161 | 10 | 40 | 297 | 42 | 313 | 7.49e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29381.t1 | AT5G50130 | 70.482 | 332 | 94 | 3 | 1 | 330 | 1 | 330 | 3.90e-167 | 469 |
| MS.gene29381.t1 | AT5G50130 | 69.310 | 290 | 89 | 0 | 41 | 330 | 7 | 296 | 7.64e-147 | 416 |
| MS.gene29381.t1 | AT5G50130 | 69.072 | 291 | 89 | 1 | 41 | 330 | 7 | 297 | 1.81e-145 | 412 |
| MS.gene29381.t1 | AT5G50130 | 71.326 | 279 | 76 | 3 | 1 | 277 | 1 | 277 | 1.22e-139 | 398 |
| MS.gene29381.t1 | AT5G50130 | 71.071 | 280 | 76 | 4 | 1 | 277 | 1 | 278 | 2.95e-138 | 395 |
| MS.gene29381.t1 | AT5G50130 | 70.930 | 258 | 72 | 2 | 1 | 257 | 1 | 256 | 7.63e-130 | 371 |
| MS.gene29381.t1 | AT5G50130 | 70.656 | 259 | 72 | 3 | 1 | 257 | 1 | 257 | 2.59e-128 | 367 |
| MS.gene29381.t1 | AT5G50130 | 69.748 | 238 | 71 | 1 | 41 | 277 | 7 | 244 | 4.63e-118 | 342 |
| MS.gene29381.t1 | AT4G24050 | 52.012 | 323 | 150 | 2 | 1 | 321 | 1 | 320 | 2.19e-117 | 342 |
| MS.gene29381.t1 | AT5G50130 | 69.456 | 239 | 71 | 2 | 41 | 277 | 7 | 245 | 1.38e-116 | 338 |
| MS.gene29381.t1 | AT1G64590 | 54.799 | 323 | 141 | 4 | 1 | 321 | 1 | 320 | 1.76e-105 | 312 |
| MS.gene29381.t1 | AT5G02540 | 50.794 | 315 | 151 | 2 | 8 | 322 | 7 | 317 | 1.09e-96 | 290 |
| MS.gene29381.t1 | AT2G37540 | 47.452 | 314 | 161 | 2 | 8 | 321 | 7 | 316 | 8.17e-96 | 287 |
| MS.gene29381.t1 | AT4G24050 | 51.254 | 279 | 129 | 3 | 1 | 277 | 1 | 274 | 1.03e-95 | 285 |
| MS.gene29381.t1 | AT4G23420 | 45.955 | 309 | 164 | 1 | 7 | 315 | 2 | 307 | 3.20e-94 | 283 |
| MS.gene29381.t1 | AT4G23420 | 45.955 | 309 | 164 | 1 | 7 | 315 | 2 | 307 | 3.20e-94 | 283 |
| MS.gene29381.t1 | AT4G23420 | 46.512 | 301 | 158 | 1 | 15 | 315 | 27 | 324 | 7.01e-93 | 280 |
| MS.gene29381.t1 | AT4G23430 | 45.307 | 309 | 166 | 1 | 7 | 315 | 2 | 307 | 2.72e-92 | 278 |
| MS.gene29381.t1 | AT4G23430 | 45.631 | 309 | 163 | 3 | 7 | 315 | 2 | 305 | 3.86e-90 | 272 |
| MS.gene29381.t1 | AT4G11410 | 46.358 | 302 | 158 | 2 | 13 | 314 | 8 | 305 | 2.76e-89 | 270 |
| MS.gene29381.t1 | AT4G23430 | 42.718 | 309 | 164 | 2 | 7 | 315 | 2 | 297 | 2.96e-82 | 252 |
| MS.gene29381.t1 | AT4G23430 | 43.042 | 309 | 161 | 4 | 7 | 315 | 2 | 295 | 4.80e-80 | 246 |
| MS.gene29381.t1 | AT2G37540 | 49.167 | 240 | 119 | 1 | 8 | 247 | 7 | 243 | 9.68e-77 | 236 |
| MS.gene29381.t1 | AT4G23420 | 45.076 | 264 | 142 | 1 | 7 | 270 | 2 | 262 | 5.90e-75 | 232 |
| MS.gene29381.t1 | AT4G23420 | 48.117 | 239 | 121 | 1 | 7 | 245 | 2 | 237 | 1.51e-73 | 228 |
| MS.gene29381.t1 | AT4G11410 | 47.154 | 246 | 127 | 1 | 13 | 258 | 8 | 250 | 2.75e-73 | 227 |
| MS.gene29381.t1 | AT4G09750 | 29.368 | 269 | 163 | 7 | 37 | 298 | 43 | 291 | 1.37e-28 | 113 |
| MS.gene29381.t1 | AT5G04070 | 31.596 | 307 | 178 | 11 | 41 | 327 | 62 | 356 | 1.61e-28 | 113 |
| MS.gene29381.t1 | AT4G27760 | 32.154 | 311 | 177 | 9 | 34 | 321 | 52 | 351 | 4.31e-28 | 112 |
| MS.gene29381.t1 | AT5G53090 | 32.476 | 311 | 176 | 10 | 34 | 321 | 51 | 350 | 6.19e-27 | 109 |
| MS.gene29381.t1 | AT5G15940 | 30.033 | 303 | 181 | 11 | 41 | 322 | 64 | 356 | 1.36e-26 | 108 |
| MS.gene29381.t1 | AT5G15940 | 30.033 | 303 | 181 | 11 | 41 | 322 | 64 | 356 | 1.36e-26 | 108 |
| MS.gene29381.t1 | AT5G15940 | 30.033 | 303 | 181 | 11 | 41 | 322 | 63 | 355 | 1.51e-26 | 108 |
| MS.gene29381.t1 | AT5G54190 | 25.962 | 312 | 195 | 10 | 41 | 321 | 96 | 402 | 1.10e-25 | 106 |
| MS.gene29381.t1 | AT4G27440 | 27.244 | 312 | 191 | 10 | 41 | 321 | 92 | 398 | 2.44e-25 | 105 |
| MS.gene29381.t1 | AT4G27440 | 27.244 | 312 | 191 | 10 | 41 | 321 | 92 | 398 | 2.44e-25 | 105 |
| MS.gene29381.t1 | AT1G03630 | 28.981 | 314 | 186 | 12 | 39 | 321 | 89 | 396 | 2.06e-24 | 102 |
| MS.gene29381.t1 | AT1G03630 | 28.981 | 314 | 186 | 12 | 39 | 321 | 91 | 398 | 2.25e-24 | 102 |
| MS.gene29381.t1 | AT5G15940 | 30.769 | 260 | 153 | 8 | 41 | 281 | 64 | 315 | 7.95e-24 | 100 |
| MS.gene29381.t1 | AT5G53100 | 29.870 | 308 | 181 | 8 | 38 | 321 | 45 | 341 | 1.27e-23 | 100 |
| MS.gene29381.t1 | AT5G54190 | 25.000 | 284 | 173 | 9 | 75 | 321 | 1 | 281 | 4.78e-20 | 89.0 |
| MS.gene29381.t1 | AT5G61830 | 24.232 | 293 | 169 | 7 | 40 | 297 | 39 | 313 | 2.06e-14 | 73.2 |
| MS.gene29381.t1 | AT5G61830 | 24.232 | 293 | 169 | 7 | 40 | 297 | 39 | 313 | 2.06e-14 | 73.2 |
| MS.gene29381.t1 | AT2G24190 | 25.163 | 306 | 160 | 13 | 36 | 292 | 8 | 293 | 1.69e-13 | 70.5 |
| MS.gene29381.t1 | AT2G24190 | 24.667 | 300 | 159 | 12 | 40 | 292 | 9 | 288 | 2.29e-13 | 70.1 |
| MS.gene29381.t1 | AT2G17845 | 30.516 | 213 | 124 | 7 | 41 | 247 | 53 | 247 | 2.85e-12 | 67.0 |
| MS.gene29381.t1 | AT3G46170 | 25.862 | 290 | 177 | 11 | 17 | 294 | 11 | 274 | 3.87e-12 | 66.2 |
| MS.gene29381.t1 | AT3G03980 | 30.973 | 226 | 116 | 9 | 34 | 243 | 12 | 213 | 1.01e-11 | 64.7 |
| MS.gene29381.t1 | AT1G63380 | 28.505 | 214 | 125 | 7 | 39 | 245 | 26 | 218 | 2.16e-11 | 63.9 |
| MS.gene29381.t1 | AT1G63380 | 28.505 | 214 | 125 | 7 | 41 | 247 | 23 | 215 | 2.27e-11 | 63.9 |
| MS.gene29381.t1 | AT1G63380 | 28.505 | 214 | 125 | 7 | 41 | 247 | 25 | 217 | 2.29e-11 | 63.9 |
| MS.gene29381.t1 | AT1G63380 | 28.505 | 214 | 125 | 7 | 39 | 245 | 19 | 211 | 2.43e-11 | 63.9 |
| MS.gene29381.t1 | AT1G62610 | 28.774 | 212 | 123 | 7 | 41 | 245 | 25 | 215 | 4.06e-11 | 63.2 |
| MS.gene29381.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 18 | 210 | 4.65e-11 | 63.2 |
| MS.gene29381.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 17 | 209 | 4.93e-11 | 62.8 |
| MS.gene29381.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 19 | 211 | 5.20e-11 | 62.8 |
| MS.gene29381.t1 | AT3G61220 | 25.817 | 306 | 150 | 14 | 40 | 293 | 9 | 289 | 5.31e-11 | 63.2 |
| MS.gene29381.t1 | AT3G61220 | 25.817 | 306 | 150 | 14 | 40 | 293 | 16 | 296 | 5.78e-11 | 62.8 |
| MS.gene29381.t1 | AT3G61220 | 25.817 | 306 | 150 | 14 | 40 | 293 | 40 | 320 | 6.50e-11 | 63.2 |
Find 49 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTAACAGAAATGTTAT+TGG | 0.226965 | 3.2:+68461035 | MS.gene29381:CDS |
| TCCTTGAATATCTGTCTTCT+TGG | 0.228861 | 3.2:-68461076 | None:intergenic |
| TACTTGGAAGGTGGGACTTC+TGG | 0.239228 | 3.2:+68460482 | MS.gene29381:intron |
| ATTGCAGGGCCTAGTGGTTT+TGG | 0.239997 | 3.2:+68459648 | MS.gene29381:CDS |
| TTCTTTGGCATGCAAAATAT+TGG | 0.244050 | 3.2:-68461299 | None:intergenic |
| TGCTTATGCTCAATCAAAAT+TGG | 0.293719 | 3.2:+68461276 | MS.gene29381:CDS |
| GTATCTCAGTGTTGCCTTCA+TGG | 0.358808 | 3.2:-68459616 | None:intergenic |
| AACAGAATAACCTTAGCATT+TGG | 0.361868 | 3.2:-68460617 | None:intergenic |
| GAGTTGTCTAGCTATTTCTT+TGG | 0.372604 | 3.2:-68461314 | None:intergenic |
| AGATACTTAGCAGGAATTGC+AGG | 0.374017 | 3.2:+68459633 | MS.gene29381:CDS |
| GAAGGTGGGACTTCTGGTAT+TGG | 0.399438 | 3.2:+68460488 | MS.gene29381:intron |
| TGGTATATTCTCTCAAGATT+TGG | 0.411347 | 3.2:+68460861 | MS.gene29381:CDS |
| TATCTCAGTGTTGCCTTCAT+GGG | 0.418442 | 3.2:-68459615 | None:intergenic |
| AATCAGAAGCTCAAAAGTTA+TGG | 0.420732 | 3.2:+68462052 | MS.gene29381:CDS |
| TTTCTTCTGTCATACATAGC+TGG | 0.434149 | 3.2:+68461112 | MS.gene29381:CDS |
| ACATTTGCCACAAATTACTT+AGG | 0.444013 | 3.2:+68460910 | MS.gene29381:CDS |
| AAATGTACCTAAGTAATTTG+TGG | 0.453221 | 3.2:-68460917 | None:intergenic |
| ATTCCTGTCTTTACAATACC+TGG | 0.456513 | 3.2:-68461512 | None:intergenic |
| TACTTCATATTGTTGCTTGG+TGG | 0.458308 | 3.2:-68462107 | None:intergenic |
| AAATACTTCATATTGTTGCT+TGG | 0.475313 | 3.2:-68462110 | None:intergenic |
| TGTTTCAAAGACATACTCAA+TGG | 0.476615 | 3.2:+68461153 | MS.gene29381:CDS |
| ACTTACATTAGAATATTAAG+TGG | 0.495604 | 3.2:-68460707 | None:intergenic |
| CAGGAATTATTAAATCTCAC+AGG | 0.497889 | 3.2:+68461528 | MS.gene29381:CDS |
| TTCTTCTGTCATACATAGCT+GGG | 0.501675 | 3.2:+68461113 | MS.gene29381:CDS |
| AAATGCTAAGGTTATTCTGT+TGG | 0.508476 | 3.2:+68460619 | MS.gene29381:CDS |
| GGTGATTAGAGCGGTTAGAC+CGG | 0.516299 | 3.2:-68459724 | None:intergenic |
| CATCCAGGTATTGTAAAGAC+AGG | 0.525444 | 3.2:+68461509 | MS.gene29381:CDS |
| TCCAAGAAGACAGATATTCA+AGG | 0.529268 | 3.2:+68461075 | MS.gene29381:CDS |
| ACTATCAATGCAGTTCATCC+AGG | 0.547059 | 3.2:+68461494 | MS.gene29381:CDS |
| TGGTGCAAGGGACTTGAAGA+AGG | 0.555937 | 3.2:+68460559 | MS.gene29381:CDS |
| AGAGGAGTGAGAATTGTGAT+TGG | 0.559022 | 3.2:+68460539 | MS.gene29381:CDS |
| AGAAATAGCTAGACAACTCA+AGG | 0.563686 | 3.2:+68461318 | MS.gene29381:CDS |
| GAATTTGAGCCAAAACCACT+AGG | 0.563701 | 3.2:-68459657 | None:intergenic |
| AAAAGAGAGTCCAAATGCTA+AGG | 0.568303 | 3.2:+68460607 | MS.gene29381:CDS |
| GCAACACTGAGATACTTAGC+AGG | 0.577681 | 3.2:+68459624 | MS.gene29381:CDS |
| CATAGCTGGGTGAAGAGACA+TGG | 0.586615 | 3.2:+68461126 | MS.gene29381:CDS |
| TGCATCAACTGCATGTTATG+TGG | 0.598728 | 3.2:+68461945 | MS.gene29381:CDS |
| ATTAGAGCGGTTAGACCGGA+AGG | 0.601271 | 3.2:-68459720 | None:intergenic |
| GATACTTAGCAGGAATTGCA+GGG | 0.603209 | 3.2:+68459634 | MS.gene29381:CDS |
| GGTCTAACCGCTCTAATCAC+CGG | 0.603950 | 3.2:+68459726 | MS.gene29381:CDS |
| GCAGGAATTGCAGGGCCTAG+TGG | 0.613097 | 3.2:+68459642 | MS.gene29381:CDS |
| GTTACTGAAATCGACATCAC+AGG | 0.613835 | 3.2:+68461687 | MS.gene29381:CDS |
| TGAGAATTGTGATTGGTGCA+AGG | 0.621535 | 3.2:+68460546 | MS.gene29381:CDS |
| GAGAATTGTGATTGGTGCAA+GGG | 0.621877 | 3.2:+68460547 | MS.gene29381:CDS |
| GCTAGAGTGTTAGCAAAGAG+AGG | 0.622747 | 3.2:+68460521 | MS.gene29381:CDS |
| AGGAATTATTAAATCTCACA+GGG | 0.638641 | 3.2:+68461529 | MS.gene29381:CDS |
| AGACTTACCGGTGATTAGAG+CGG | 0.666100 | 3.2:-68459733 | None:intergenic |
| GAATTATTAAATCTCACAGG+GGG | 0.693855 | 3.2:+68461531 | MS.gene29381:CDS |
| GGAATTATTAAATCTCACAG+GGG | 0.748289 | 3.2:+68461530 | MS.gene29381:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATAAAATGAAAAAG+TGG | - | chr3.2:68460750-68460769 | None:intergenic | 10.0% |
| !! | TTAAATTTAAATACTCATAA+TGG | + | chr3.2:68461229-68461248 | MS.gene29381:intron | 10.0% |
| !! | AAGTATTCATATATAACTAT+AGG | + | chr3.2:68461454-68461473 | MS.gene29381:intron | 15.0% |
| !! | TTATATATGAATACTTTAGT+GGG | - | chr3.2:68461450-68461469 | None:intergenic | 15.0% |
| !! | AAAATTTAATTAGCAGAGAT+AGG | - | chr3.2:68460144-68460163 | None:intergenic | 20.0% |
| !! | ACTAAACAAACAAAAGAAAA+TGG | - | chr3.2:68460110-68460129 | None:intergenic | 20.0% |
| !! | ACTTACATTAGAATATTAAG+TGG | - | chr3.2:68460710-68460729 | None:intergenic | 20.0% |
| !! | ATATATCTCACAATTATATG+TGG | + | chr3.2:68461910-68461929 | MS.gene29381:intron | 20.0% |
| !! | ATTAGCATAGTGAAATAAAA+TGG | + | chr3.2:68460768-68460787 | MS.gene29381:intron | 20.0% |
| !! | CAACTTCATTAATTAATAGT+TGG | - | chr3.2:68460444-68460463 | None:intergenic | 20.0% |
| !! | GTTATATATGAATACTTTAG+TGG | - | chr3.2:68461451-68461470 | None:intergenic | 20.0% |
| !! | TCTAATTCTTAATGCATATT+TGG | + | chr3.2:68460939-68460958 | MS.gene29381:intron | 20.0% |
| !!! | AGTATTTTTTTCATCATTCA+TGG | + | chr3.2:68460417-68460436 | MS.gene29381:intron | 20.0% |
| !!! | ATACAATACTCAAGTTTTTT+GGG | - | chr3.2:68460388-68460407 | None:intergenic | 20.0% |
| !!! | ATTTTATTGAATTGAATTGC+AGG | + | chr3.2:68461006-68461025 | MS.gene29381:intron | 20.0% |
| !!! | GTTAAATTTTGTTAAGCATA+GGG | + | chr3.2:68461727-68461746 | MS.gene29381:intron | 20.0% |
| !!! | TATACAATACTCAAGTTTTT+TGG | - | chr3.2:68460389-68460408 | None:intergenic | 20.0% |
| !!! | TGTTAAATTTTGTTAAGCAT+AGG | + | chr3.2:68461726-68461745 | MS.gene29381:intron | 20.0% |
| !!! | TTTTATGATATGTACACTAA+TGG | + | chr3.2:68460807-68460826 | MS.gene29381:intron | 20.0% |
| ! | AAATGTACCTAAGTAATTTG+TGG | - | chr3.2:68460920-68460939 | None:intergenic | 25.0% |
| ! | AATGAGATTATGAGTGTAAA+TGG | - | chr3.2:68460300-68460319 | None:intergenic | 25.0% |
| ! | AGGAATTATTAAATCTCACA+GGG | + | chr3.2:68461529-68461548 | MS.gene29381:CDS | 25.0% |
| ! | ATGAGATTATGAGTGTAAAT+GGG | - | chr3.2:68460299-68460318 | None:intergenic | 25.0% |
| ! | CCTAAATTTCATTTCATCAA+AGG | + | chr3.2:68461607-68461626 | MS.gene29381:intron | 25.0% |
| ! | CCTTTGATGAAATGAAATTT+AGG | - | chr3.2:68461610-68461629 | None:intergenic | 25.0% |
| ! | GATTGATGTAAACATAAATG+GGG | + | chr3.2:68461788-68461807 | MS.gene29381:intron | 25.0% |
| ! | GGATTGATGTAAACATAAAT+GGG | + | chr3.2:68461787-68461806 | MS.gene29381:intron | 25.0% |
| ! | TGGATTGATGTAAACATAAA+TGG | + | chr3.2:68461786-68461805 | MS.gene29381:intron | 25.0% |
| ! | TTCATATATAACTATAGGCA+AGG | + | chr3.2:68461459-68461478 | MS.gene29381:intron | 25.0% |
| ! | TTTGCTAACAGAAATGTTAT+TGG | + | chr3.2:68461035-68461054 | MS.gene29381:CDS | 25.0% |
| !! | AAATTTTACAGAAACAATGC+TGG | + | chr3.2:68460841-68460860 | MS.gene29381:intron | 25.0% |
| !!! | ATCGTTGTTGATTTTTTACT+TGG | + | chr3.2:68460466-68460485 | MS.gene29381:intron | 25.0% |
| !!! | GTGTGTATGAGATTTTTTTT+TGG | - | chr3.2:68459824-68459843 | None:intergenic | 25.0% |
| !!! | TTGTTGATTTTTTACTTGGA+AGG | + | chr3.2:68460470-68460489 | MS.gene29381:intron | 25.0% |
| AAATGCTAAGGTTATTCTGT+TGG | + | chr3.2:68460619-68460638 | MS.gene29381:CDS | 30.0% | |
| AACAGAATAACCTTAGCATT+TGG | - | chr3.2:68460620-68460639 | None:intergenic | 30.0% | |
| AATCAGAAGCTCAAAAGTTA+TGG | + | chr3.2:68462052-68462071 | MS.gene29381:CDS | 30.0% | |
| ACATTTGCCACAAATTACTT+AGG | + | chr3.2:68460910-68460929 | MS.gene29381:CDS | 30.0% | |
| AGAGTACAATTACATTGTTG+TGG | + | chr3.2:68461836-68461855 | MS.gene29381:intron | 30.0% | |
| ATCACATTGTTACAAGAAAG+TGG | + | chr3.2:68461398-68461417 | MS.gene29381:intron | 30.0% | |
| ATCATAGTGAGTTCATTTAG+TGG | + | chr3.2:68460963-68460982 | MS.gene29381:intron | 30.0% | |
| CAGGAATTATTAAATCTCAC+AGG | + | chr3.2:68461528-68461547 | MS.gene29381:CDS | 30.0% | |
| CTTTGATGCTATGAAAAACA+AGG | - | chr3.2:68461668-68461687 | None:intergenic | 30.0% | |
| GAATTATTAAATCTCACAGG+GGG | + | chr3.2:68461531-68461550 | MS.gene29381:CDS | 30.0% | |
| GATGATCAATAAAATGAGCA+AGG | - | chr3.2:68460341-68460360 | None:intergenic | 30.0% | |
| GGAATTATTAAATCTCACAG+GGG | + | chr3.2:68461530-68461549 | MS.gene29381:CDS | 30.0% | |
| TAAACCATACATAACCAACT+TGG | - | chr3.2:68459869-68459888 | None:intergenic | 30.0% | |
| TATCTCACAATTATATGTGG+TGG | + | chr3.2:68461913-68461932 | MS.gene29381:intron | 30.0% | |
| TCATAGTGAGTTCATTTAGT+GGG | + | chr3.2:68460964-68460983 | MS.gene29381:intron | 30.0% | |
| TGAGTCATTCTTTCTCATAA+AGG | + | chr3.2:68459927-68459946 | MS.gene29381:intron | 30.0% | |
| TGCTTATGCTCAATCAAAAT+TGG | + | chr3.2:68461276-68461295 | MS.gene29381:CDS | 30.0% | |
| TGGTATATTCTCTCAAGATT+TGG | + | chr3.2:68460861-68460880 | MS.gene29381:CDS | 30.0% | |
| TGTTTCAAAGACATACTCAA+TGG | + | chr3.2:68461153-68461172 | MS.gene29381:CDS | 30.0% | |
| TTCTTTGGCATGCAAAATAT+TGG | - | chr3.2:68461302-68461321 | None:intergenic | 30.0% | |
| TTTCACTTGGAAAAATTGCA+TGG | + | chr3.2:68460191-68460210 | MS.gene29381:intron | 30.0% | |
| ! | AAATGAGCAAGGTGTATTTT+TGG | - | chr3.2:68460330-68460349 | None:intergenic | 30.0% |
| ! | AATGAGCAAGGTGTATTTTT+GGG | - | chr3.2:68460329-68460348 | None:intergenic | 30.0% |
| ! | AATGGTTTTTGCAGCTATAA+TGG | + | chr3.2:68461247-68461266 | MS.gene29381:intron | 30.0% |
| ! | TTACTTGTTAAGCTTTCACT+TGG | + | chr3.2:68460178-68460197 | MS.gene29381:intron | 30.0% |
| !!! | TGATTTTTTACTTGGAAGGT+GGG | + | chr3.2:68460474-68460493 | MS.gene29381:intron | 30.0% |
| !!! | TTGATTTTTTACTTGGAAGG+TGG | + | chr3.2:68460473-68460492 | MS.gene29381:intron | 30.0% |
| AAAAGAGAGTCCAAATGCTA+AGG | + | chr3.2:68460607-68460626 | MS.gene29381:CDS | 35.0% | |
| AAAGTCATTGCAACTTTGCA+GGG | - | chr3.2:68461760-68461779 | None:intergenic | 35.0% | |
| ACAAAACTTTCTGTGCATGT+TGG | + | chr3.2:68461423-68461442 | MS.gene29381:intron | 35.0% | |
| AGAAATAGCTAGACAACTCA+AGG | + | chr3.2:68461318-68461337 | MS.gene29381:CDS | 35.0% | |
| ATTCCTGTCTTTACAATACC+TGG | - | chr3.2:68461515-68461534 | None:intergenic | 35.0% | |
| CTGTGCTAAATTGTAGTACT+TGG | + | chr3.2:68459972-68459991 | MS.gene29381:intron | 35.0% | |
| CTTTGAGTCCAAAAACAGAA+GGG | + | chr3.2:68461968-68461987 | MS.gene29381:CDS | 35.0% | |
| GAGACCAAAATCCAACAAAA+AGG | - | chr3.2:68460266-68460285 | None:intergenic | 35.0% | |
| GTTGCAATGACTTTGATTGA+TGG | + | chr3.2:68461766-68461785 | MS.gene29381:intron | 35.0% | |
| TCCAAGAAGACAGATATTCA+AGG | + | chr3.2:68461075-68461094 | MS.gene29381:CDS | 35.0% | |
| TCCTTGAATATCTGTCTTCT+TGG | - | chr3.2:68461079-68461098 | None:intergenic | 35.0% | |
| TCTGTCTATATAGTTGCTTG+AGG | - | chr3.2:68461819-68461838 | None:intergenic | 35.0% | |
| TGAAAAACAAGGAATCTGCA+TGG | - | chr3.2:68461657-68461676 | None:intergenic | 35.0% | |
| TTCTTCTGTCATACATAGCT+GGG | + | chr3.2:68461113-68461132 | MS.gene29381:CDS | 35.0% | |
| TTTCTTCTGTCATACATAGC+TGG | + | chr3.2:68461112-68461131 | MS.gene29381:CDS | 35.0% | |
| TTTGAGTCCAAAAACAGAAG+GGG | + | chr3.2:68461969-68461988 | MS.gene29381:CDS | 35.0% | |
| ! | CATGCCTTTTTGTTGGATTT+TGG | + | chr3.2:68460259-68460278 | MS.gene29381:intron | 35.0% |
| ! | TGTTCTTCTTTTCTTCCTTC+CGG | + | chr3.2:68459705-68459724 | MS.gene29381:CDS | 35.0% |
| !! | ATGAGCAAGGTGTATTTTTG+GGG | - | chr3.2:68460328-68460347 | None:intergenic | 35.0% |
| !! | GAGTTGTCTAGCTATTTCTT+TGG | - | chr3.2:68461317-68461336 | None:intergenic | 35.0% |
| !! | TTGACCAAGTTGGTTATGTA+TGG | + | chr3.2:68459862-68459881 | MS.gene29381:intron | 35.0% |
| ACTATCAATGCAGTTCATCC+AGG | + | chr3.2:68461494-68461513 | MS.gene29381:CDS | 40.0% | |
| ACTGAATTCTCAAGGTCAAG+AGG | - | chr3.2:68459768-68459787 | None:intergenic | 40.0% | |
| AGAGGAGTGAGAATTGTGAT+TGG | + | chr3.2:68460539-68460558 | MS.gene29381:CDS | 40.0% | |
| AGATACTTAGCAGGAATTGC+AGG | + | chr3.2:68459633-68459652 | MS.gene29381:CDS | 40.0% | |
| CAAAGTCATTGCAACTTTGC+AGG | - | chr3.2:68461761-68461780 | None:intergenic | 40.0% | |
| GAATTTGAGCCAAAACCACT+AGG | - | chr3.2:68459660-68459679 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGGTGCAA+GGG | + | chr3.2:68460547-68460566 | MS.gene29381:CDS | 40.0% | |
| GATACTTAGCAGGAATTGCA+GGG | + | chr3.2:68459634-68459653 | MS.gene29381:CDS | 40.0% | |
| GTTACTGAAATCGACATCAC+AGG | + | chr3.2:68461687-68461706 | MS.gene29381:CDS | 40.0% | |
| TGAGAATTGTGATTGGTGCA+AGG | + | chr3.2:68460546-68460565 | MS.gene29381:CDS | 40.0% | |
| TGCATCAACTGCATGTTATG+TGG | + | chr3.2:68461945-68461964 | MS.gene29381:CDS | 40.0% | |
| TGTATATCTGTGCACAACTG+CGG | - | chr3.2:68459793-68459812 | None:intergenic | 40.0% | |
| ! | CATCCAGGTATTGTAAAGAC+AGG | + | chr3.2:68461509-68461528 | MS.gene29381:CDS | 40.0% |
| ! | CTATGCACATGCCTTTTTGT+TGG | + | chr3.2:68460252-68460271 | MS.gene29381:intron | 40.0% |
| ! | GCTTTGAGTCCAAAAACAGA+AGG | + | chr3.2:68461967-68461986 | MS.gene29381:CDS | 40.0% |
| AATTATATGTGGTGGTCCGC+AGG | + | chr3.2:68461921-68461940 | MS.gene29381:intron | 45.0% | |
| ACACGCTTTCTTGACCAAGT+TGG | + | chr3.2:68459852-68459871 | MS.gene29381:intron | 45.0% | |
| AGACTTACCGGTGATTAGAG+CGG | - | chr3.2:68459736-68459755 | None:intergenic | 45.0% | |
| ATTATATGTGGTGGTCCGCA+GGG | + | chr3.2:68461922-68461941 | MS.gene29381:intron | 45.0% | |
| ATTCTCAAGGTCAAGAGGAC+TGG | - | chr3.2:68459763-68459782 | None:intergenic | 45.0% | |
| CAAAAACAGAAGGGGTGAGT+GGG | + | chr3.2:68461977-68461996 | MS.gene29381:CDS | 45.0% | |
| CATTGCAACTTTGCAGGGTT+TGG | - | chr3.2:68461755-68461774 | None:intergenic | 45.0% | |
| CTGAAATCGACATCACAGGT+TGG | + | chr3.2:68461691-68461710 | MS.gene29381:intron | 45.0% | |
| GCAACACTGAGATACTTAGC+AGG | + | chr3.2:68459624-68459643 | MS.gene29381:CDS | 45.0% | |
| TCTCACAGGGGGTTAATAAC+AGG | + | chr3.2:68461542-68461561 | MS.gene29381:CDS | 45.0% | |
| ! | AGGACTGGTATGAGACTTAC+CGG | - | chr3.2:68459748-68459767 | None:intergenic | 45.0% |
| ! | GCTAGAGTGTTAGCAAAGAG+AGG | + | chr3.2:68460521-68460540 | MS.gene29381:CDS | 45.0% |
| !!! | TTCTATTTTTTTTTTTTTTT+TGG | + | chr3.2:68460049-68460068 | MS.gene29381:intron | 5.0% |
| ATTAGAGCGGTTAGACCGGA+AGG | - | chr3.2:68459723-68459742 | None:intergenic | 50.0% | |
| CATAGCTGGGTGAAGAGACA+TGG | + | chr3.2:68461126-68461145 | MS.gene29381:CDS | 50.0% | |
| CCAAAAACAGAAGGGGTGAG+TGG | + | chr3.2:68461976-68461995 | MS.gene29381:CDS | 50.0% | |
| CTGCGGAGACTGAATTCTCA+AGG | - | chr3.2:68459776-68459795 | None:intergenic | 50.0% | |
| GAAGGTGGGACTTCTGGTAT+TGG | + | chr3.2:68460488-68460507 | MS.gene29381:intron | 50.0% | |
| GGTCTAACCGCTCTAATCAC+CGG | + | chr3.2:68459726-68459745 | MS.gene29381:CDS | 50.0% | |
| GGTGATTAGAGCGGTTAGAC+CGG | - | chr3.2:68459727-68459746 | None:intergenic | 50.0% | |
| TACTTGGAAGGTGGGACTTC+TGG | + | chr3.2:68460482-68460501 | MS.gene29381:intron | 50.0% | |
| TGGTGCAAGGGACTTGAAGA+AGG | + | chr3.2:68460559-68460578 | MS.gene29381:CDS | 50.0% | |
| ! | ATTGCAGGGCCTAGTGGTTT+TGG | + | chr3.2:68459648-68459667 | MS.gene29381:CDS | 50.0% |
| ! | CCACTCACCCCTTCTGTTTT+TGG | - | chr3.2:68461979-68461998 | None:intergenic | 50.0% |
| GACGTGAGAGTGAGCAAGCA+TGG | + | chr3.2:68459949-68459968 | MS.gene29381:intron | 55.0% | |
| ! | CATGCAGTTGATGCACCCTG+CGG | - | chr3.2:68461940-68461959 | None:intergenic | 55.0% |
| GCAGGAATTGCAGGGCCTAG+TGG | + | chr3.2:68459642-68459661 | MS.gene29381:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 68459618 | 68462125 | 68459618 | ID=MS.gene29381 |
| chr3.2 | mRNA | 68459618 | 68462125 | 68459618 | ID=MS.gene29381.t1;Parent=MS.gene29381 |
| chr3.2 | exon | 68459618 | 68459747 | 68459618 | ID=MS.gene29381.t1.exon1;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68459618 | 68459747 | 68459618 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68460492 | 68460723 | 68460492 | ID=MS.gene29381.t1.exon2;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68460492 | 68460723 | 68460492 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68460852 | 68460931 | 68460852 | ID=MS.gene29381.t1.exon3;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68460852 | 68460931 | 68460852 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68461028 | 68461181 | 68461028 | ID=MS.gene29381.t1.exon4;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68461028 | 68461181 | 68461028 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68461261 | 68461339 | 68461261 | ID=MS.gene29381.t1.exon5;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68461261 | 68461339 | 68461261 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68461476 | 68461563 | 68461476 | ID=MS.gene29381.t1.exon6;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68461476 | 68461563 | 68461476 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68461662 | 68461708 | 68461662 | ID=MS.gene29381.t1.exon7;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68461662 | 68461708 | 68461662 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| chr3.2 | exon | 68461943 | 68462125 | 68461943 | ID=MS.gene29381.t1.exon8;Parent=MS.gene29381.t1 |
| chr3.2 | CDS | 68461943 | 68462125 | 68461943 | ID=cds.MS.gene29381.t1;Parent=MS.gene29381.t1 |
| Gene Sequence |
| Protein sequence |
