Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41037.t1 | XP_013467899.1 | 94 | 651 | 13 | 4 | 1 | 627 | 1 | 649 | 0.00E+00 | 1087.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41037.t1 | Q9SJ56 | 48.1 | 724 | 235 | 26 | 1 | 627 | 1 | 680 | 6.1e-141 | 502.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41037.t1 | A0A072VK10 | 94.0 | 651 | 13 | 4 | 1 | 627 | 1 | 649 | 0.0e+00 | 1087.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41037.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene41037 | 0.821061 | 4.93E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene41037 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene41037 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene41037 | 0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene050105 | MS.gene41037 | 0.843837 | 1.10E-58 | -1.69E-46 |
| MS.gene050680 | MS.gene41037 | 0.843151 | 1.67E-58 | -1.69E-46 |
| MS.gene050750 | MS.gene41037 | 0.807364 | 5.24E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene41037 | 0.813898 | 2.03E-51 | -1.69E-46 |
| MS.gene051122 | MS.gene41037 | 0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene41037 | 0.832575 | 8.74E-56 | -1.69E-46 |
| MS.gene051373 | MS.gene41037 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene41037 | 0.806287 | 8.85E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene41037 | 0.82016 | 7.94E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene41037 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene41037 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene41037 | 0.812019 | 5.23E-51 | -1.69E-46 |
| MS.gene052426 | MS.gene41037 | 0.83624 | 1.05E-56 | -1.69E-46 |
| MS.gene052674 | MS.gene41037 | 0.824398 | 8.25E-54 | -1.69E-46 |
| MS.gene052675 | MS.gene41037 | 0.823067 | 1.69E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene41037 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene41037 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene053494 | MS.gene41037 | 0.872927 | 2.18E-67 | -1.69E-46 |
| MS.gene054405 | MS.gene41037 | 0.808954 | 2.40E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene41037 | 0.828316 | 9.62E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene41037 | 0.850691 | 1.44E-60 | -1.69E-46 |
| MS.gene055211 | MS.gene41037 | 0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene41037 | 0.948164 | 1.62E-106 | -1.69E-46 |
| MS.gene05595 | MS.gene41037 | 0.853517 | 2.27E-61 | -1.69E-46 |
| MS.gene056979 | MS.gene41037 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene41037 | -0.867202 | 1.63E-65 | -1.69E-46 |
| MS.gene057394 | MS.gene41037 | 0.806865 | 6.68E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene41037 | 0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene41037 | 0.850117 | 2.09E-60 | -1.69E-46 |
| MS.gene057639 | MS.gene41037 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene41037 | 0.848765 | 4.98E-60 | -1.69E-46 |
| MS.gene058595 | MS.gene41037 | 0.807357 | 5.26E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene41037 | 0.828422 | 9.07E-55 | -1.69E-46 |
| MS.gene059609 | MS.gene41037 | 0.85649 | 3.11E-62 | -1.69E-46 |
| MS.gene060011 | MS.gene41037 | 0.810983 | 8.79E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene41037 | 0.817712 | 2.86E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene41037 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene41037 | 0.82922 | 5.82E-55 | -1.69E-46 |
| MS.gene060850 | MS.gene41037 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene41037 | 0.815485 | 9.02E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene41037 | 0.814568 | 1.44E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene41037 | 0.812804 | 3.53E-51 | -1.69E-46 |
| MS.gene060942 | MS.gene41037 | 0.814898 | 1.22E-51 | -1.69E-46 |
| MS.gene060943 | MS.gene41037 | 0.828295 | 9.73E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene41037 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene41037 | 0.83543 | 1.69E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41037.t1 | MTR_1g057790 | 94.470 | 651 | 10 | 4 | 1 | 627 | 1 | 649 | 0.0 | 1256 |
| MS.gene41037.t1 | MTR_7g106320 | 63.889 | 684 | 166 | 20 | 1 | 627 | 1 | 660 | 0.0 | 761 |
| MS.gene41037.t1 | MTR_4g051532 | 45.913 | 734 | 267 | 28 | 1 | 627 | 1 | 711 | 1.55e-160 | 477 |
| MS.gene41037.t1 | MTR_1g023050 | 54.870 | 308 | 119 | 5 | 119 | 416 | 148 | 445 | 1.02e-100 | 320 |
| MS.gene41037.t1 | MTR_3g112300 | 54.266 | 293 | 117 | 6 | 127 | 412 | 148 | 430 | 2.38e-95 | 302 |
| MS.gene41037.t1 | MTR_3g112300 | 54.266 | 293 | 117 | 6 | 127 | 412 | 148 | 430 | 1.42e-94 | 303 |
| MS.gene41037.t1 | MTR_5g018860 | 46.552 | 348 | 160 | 6 | 130 | 454 | 330 | 674 | 1.07e-88 | 291 |
| MS.gene41037.t1 | MTR_8g078480 | 53.103 | 290 | 116 | 4 | 134 | 411 | 384 | 665 | 2.18e-87 | 290 |
| MS.gene41037.t1 | MTR_8g098815 | 52.964 | 253 | 111 | 3 | 138 | 387 | 185 | 432 | 7.56e-80 | 265 |
| MS.gene41037.t1 | MTR_3g112300 | 52.381 | 252 | 106 | 5 | 127 | 371 | 148 | 392 | 1.76e-77 | 252 |
| MS.gene41037.t1 | MTR_3g112290 | 47.584 | 269 | 122 | 4 | 137 | 397 | 164 | 421 | 2.31e-72 | 240 |
| MS.gene41037.t1 | MTR_4g019450 | 41.617 | 334 | 145 | 7 | 133 | 447 | 191 | 493 | 1.05e-70 | 240 |
| MS.gene41037.t1 | MTR_7g065050 | 45.066 | 304 | 128 | 8 | 130 | 420 | 129 | 406 | 4.16e-68 | 231 |
| MS.gene41037.t1 | MTR_2g095050 | 40.810 | 321 | 165 | 7 | 89 | 396 | 203 | 511 | 5.73e-67 | 230 |
| MS.gene41037.t1 | MTR_3g112300 | 49.784 | 231 | 102 | 5 | 127 | 350 | 148 | 371 | 1.88e-64 | 217 |
| MS.gene41037.t1 | MTR_1g016490 | 35.211 | 284 | 155 | 5 | 139 | 410 | 244 | 510 | 5.74e-49 | 179 |
| MS.gene41037.t1 | MTR_7g114930 | 91.892 | 37 | 3 | 0 | 505 | 541 | 9 | 45 | 9.92e-17 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41037.t1 | AT2G35940 | 50.411 | 730 | 209 | 25 | 1 | 627 | 1 | 680 | 0.0 | 550 |
| MS.gene41037.t1 | AT2G35940 | 50.411 | 730 | 209 | 25 | 1 | 627 | 1 | 680 | 0.0 | 550 |
| MS.gene41037.t1 | AT2G35940 | 50.411 | 730 | 209 | 25 | 1 | 627 | 1 | 680 | 0.0 | 550 |
| MS.gene41037.t1 | AT2G16400 | 54.082 | 294 | 115 | 4 | 121 | 412 | 97 | 372 | 7.58e-98 | 308 |
| MS.gene41037.t1 | AT4G34610 | 56.934 | 274 | 88 | 5 | 142 | 406 | 144 | 396 | 1.26e-92 | 296 |
| MS.gene41037.t1 | AT4G34610 | 56.934 | 274 | 88 | 5 | 142 | 406 | 144 | 396 | 1.26e-92 | 296 |
| MS.gene41037.t1 | AT4G34610 | 56.934 | 274 | 88 | 5 | 142 | 406 | 144 | 396 | 1.26e-92 | 296 |
| MS.gene41037.t1 | AT4G34610 | 56.934 | 274 | 88 | 5 | 142 | 406 | 144 | 396 | 1.26e-92 | 296 |
| MS.gene41037.t1 | AT1G75410 | 52.921 | 291 | 122 | 5 | 133 | 419 | 162 | 441 | 6.75e-92 | 294 |
| MS.gene41037.t1 | AT1G75410 | 52.921 | 291 | 122 | 5 | 133 | 419 | 162 | 441 | 6.75e-92 | 294 |
| MS.gene41037.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 129 | 398 | 156 | 425 | 2.03e-91 | 293 |
| MS.gene41037.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 129 | 398 | 156 | 425 | 2.03e-91 | 293 |
| MS.gene41037.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 129 | 398 | 156 | 425 | 2.03e-91 | 293 |
| MS.gene41037.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 129 | 398 | 156 | 425 | 2.03e-91 | 293 |
| MS.gene41037.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 129 | 398 | 156 | 425 | 2.03e-91 | 293 |
| MS.gene41037.t1 | AT2G27220 | 46.429 | 364 | 147 | 9 | 120 | 473 | 62 | 387 | 6.08e-86 | 275 |
| MS.gene41037.t1 | AT2G27220 | 46.429 | 364 | 147 | 9 | 120 | 473 | 62 | 387 | 6.08e-86 | 275 |
| MS.gene41037.t1 | AT2G27220 | 44.241 | 382 | 147 | 10 | 120 | 473 | 62 | 405 | 3.67e-82 | 266 |
| MS.gene41037.t1 | AT4G36870 | 50.000 | 296 | 126 | 5 | 138 | 420 | 312 | 598 | 1.17e-80 | 270 |
| MS.gene41037.t1 | AT4G36870 | 50.000 | 296 | 126 | 5 | 138 | 420 | 312 | 598 | 1.17e-80 | 270 |
| MS.gene41037.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 132 | 391 | 232 | 491 | 2.72e-78 | 261 |
| MS.gene41037.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 132 | 391 | 232 | 491 | 2.72e-78 | 261 |
| MS.gene41037.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 132 | 391 | 232 | 491 | 2.72e-78 | 261 |
| MS.gene41037.t1 | AT1G75410 | 53.498 | 243 | 98 | 5 | 133 | 371 | 162 | 393 | 4.73e-74 | 243 |
| MS.gene41037.t1 | AT5G41410 | 45.985 | 274 | 132 | 3 | 141 | 400 | 196 | 467 | 6.52e-73 | 246 |
| MS.gene41037.t1 | AT2G23760 | 43.302 | 321 | 112 | 5 | 132 | 391 | 232 | 543 | 1.94e-68 | 236 |
| MS.gene41037.t1 | AT1G75430 | 42.123 | 292 | 148 | 7 | 132 | 415 | 10 | 288 | 3.82e-65 | 216 |
| MS.gene41037.t1 | AT4G36870 | 49.180 | 244 | 106 | 4 | 138 | 372 | 312 | 546 | 4.30e-64 | 221 |
| MS.gene41037.t1 | AT5G02030 | 40.367 | 327 | 155 | 5 | 77 | 394 | 123 | 418 | 2.48e-63 | 219 |
| MS.gene41037.t1 | AT4G36870 | 48.760 | 242 | 106 | 4 | 138 | 370 | 312 | 544 | 6.85e-63 | 218 |
| MS.gene41037.t1 | AT2G27990 | 38.629 | 321 | 160 | 6 | 84 | 396 | 205 | 496 | 2.86e-54 | 195 |
| MS.gene41037.t1 | AT4G32980 | 37.539 | 317 | 162 | 9 | 103 | 403 | 154 | 450 | 3.48e-54 | 192 |
| MS.gene41037.t1 | AT4G32980 | 37.539 | 317 | 162 | 9 | 103 | 403 | 154 | 450 | 3.48e-54 | 192 |
| MS.gene41037.t1 | AT1G75430 | 37.885 | 227 | 125 | 6 | 132 | 350 | 10 | 228 | 4.92e-36 | 137 |
| MS.gene41037.t1 | AT2G27990 | 32.000 | 275 | 150 | 6 | 84 | 350 | 205 | 450 | 8.64e-28 | 117 |
Find 164 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAAACGGCTGTGTTTC+GGG | 0.133801 | 1.3:-41759794 | MS.gene41037:CDS |
| GAACAAATTTCAATGAAATT+TGG | 0.179649 | 1.3:-41756754 | MS.gene41037:CDS |
| GCTTCACGCGCCGCTGAATT+AGG | 0.196754 | 1.3:+41759908 | None:intergenic |
| TCTTATTCGCAGCTCTAATT+TGG | 0.208590 | 1.3:+41757809 | None:intergenic |
| CCTCATTGTGACACATTATC+AGG | 0.219156 | 1.3:-41756565 | MS.gene41037:CDS |
| TGCTTCAAACGGCTGTGTTT+CGG | 0.238102 | 1.3:-41759795 | MS.gene41037:CDS |
| GTGGTGGAGGGAAGTGTTGC+CGG | 0.239922 | 1.3:+41760078 | None:intergenic |
| GATGAAGTTGTTAATGTTAA+TGG | 0.243321 | 1.3:-41759716 | MS.gene41037:CDS |
| TTCTTCCTAGTTGAATGTTT+TGG | 0.253546 | 1.3:+41756518 | None:intergenic |
| TAAATGCTCGAGTTCGTCTT+TGG | 0.292125 | 1.3:-41757137 | MS.gene41037:CDS |
| AATTGTGCGGCAAACCTCTT+TGG | 0.296812 | 1.3:+41756424 | None:intergenic |
| TAATGTTAATGGTGGGATTA+AGG | 0.300957 | 1.3:-41759705 | MS.gene41037:CDS |
| TAGAGCTGCGAATAAGAGTT+TGG | 0.301506 | 1.3:-41757803 | MS.gene41037:CDS |
| GGTGAGGACGCGCGTGTTCC+CGG | 0.307944 | 1.3:-41759836 | MS.gene41037:CDS |
| ACTAATTTCATTGCTGGTTT+CGG | 0.310210 | 1.3:-41756685 | MS.gene41037:CDS |
| AACCAAACTAATTTCATTGC+TGG | 0.316269 | 1.3:-41756691 | MS.gene41037:CDS |
| AACCAGCAATGAAATTAGTT+TGG | 0.317050 | 1.3:+41756689 | None:intergenic |
| ATTATTAGTTGTTGTTTCAT+TGG | 0.321824 | 1.3:+41756777 | None:intergenic |
| CTGTTTCTGTTCTTCGTGCT+TGG | 0.327008 | 1.3:-41757636 | MS.gene41037:CDS |
| TCTGGTGTTGTTGGTGGTGG+AGG | 0.335542 | 1.3:+41760065 | None:intergenic |
| ATATGGTACAGGTTTCAAAT+TGG | 0.342374 | 1.3:-41757164 | MS.gene41037:intron |
| ACAAAGAGCTATTCAACAAT+TGG | 0.347219 | 1.3:-41757710 | MS.gene41037:CDS |
| TGGTGGAGGGAAGTGTTGCC+GGG | 0.348095 | 1.3:+41760079 | None:intergenic |
| GTGAATGTTAGAAACAATTC+AGG | 0.352767 | 1.3:-41756892 | MS.gene41037:CDS |
| TTTGAACAAGTTGCAGGAAT+TGG | 0.356194 | 1.3:-41757910 | MS.gene41037:CDS |
| TCCTCGTTTGAACAAGTTGC+AGG | 0.356397 | 1.3:-41757916 | MS.gene41037:CDS |
| TAGAGATGGTTATTGTTTCA+TGG | 0.358531 | 1.3:-41756716 | MS.gene41037:CDS |
| TTGTTTGGAATTGAAACTTT+TGG | 0.360991 | 1.3:+41756963 | None:intergenic |
| CTTATTTATGCCACAAAATC+CGG | 0.365359 | 1.3:+41756397 | None:intergenic |
| GTTGGTGGTGGTGATGGAAA+TGG | 0.367432 | 1.3:-41759602 | MS.gene41037:CDS |
| GGAACTCTTTCTTGTGGAGT+TGG | 0.373552 | 1.3:+41757003 | None:intergenic |
| AACCATAGGAATGTCTTGTT+TGG | 0.375205 | 1.3:+41756948 | None:intergenic |
| TTTCTAACATTCACACCAAT+AGG | 0.376813 | 1.3:+41756901 | None:intergenic |
| ACGCGCCACCACAGTTTGTC+GGG | 0.378671 | 1.3:-41760033 | MS.gene41037:CDS |
| ACACCATCAACTTCACCTAT+TGG | 0.384849 | 1.3:-41756916 | MS.gene41037:CDS |
| ATTAGCGAAACAAATGAGTT+TGG | 0.384850 | 1.3:-41756487 | MS.gene41037:CDS |
| CTTTCGGGCAATCCTCTTTG+AGG | 0.389055 | 1.3:+41757661 | None:intergenic |
| TGTTTAAAAGATGCAATTAC+CGG | 0.390768 | 1.3:-41757832 | MS.gene41037:CDS |
| CAAAACAAACAGGACTTACT+AGG | 0.391251 | 1.3:-41757300 | MS.gene41037:CDS |
| CTTCACGCGCCGCTGAATTA+GGG | 0.391599 | 1.3:+41759909 | None:intergenic |
| GGTTCTGTTGGTGGTGGTGA+TGG | 0.395350 | 1.3:-41759608 | MS.gene41037:CDS |
| TCATGGTTCCTCGTTCGCTT+TGG | 0.399272 | 1.3:+41756829 | None:intergenic |
| GGAAGTGTTGCCGGGGTGAT+TGG | 0.399478 | 1.3:+41760087 | None:intergenic |
| GACGCGCGTGTTCCCGGTGG+TGG | 0.400463 | 1.3:-41759830 | MS.gene41037:CDS |
| CATGAGGTTTCTGCTTTGCA+TGG | 0.403905 | 1.3:-41759974 | MS.gene41037:CDS |
| AAGAACAGAAACAGATCTTT+CGG | 0.408106 | 1.3:+41757645 | None:intergenic |
| GGAGAAGGTGGTTCTGTTGG+TGG | 0.408233 | 1.3:-41759617 | MS.gene41037:CDS |
| TTCAGCTTCACGGAACTTGA+TGG | 0.410535 | 1.3:-41756868 | MS.gene41037:CDS |
| GTTTGCCGCACAATTGTTAC+CGG | 0.411095 | 1.3:-41756416 | MS.gene41037:CDS |
| TTGGATTCTGTTTCCGAGGT+TGG | 0.416477 | 1.3:+41756982 | None:intergenic |
| TCATTGGACTTCACATGATT+CGG | 0.418133 | 1.3:+41756793 | None:intergenic |
| AGGAAATCACCATCTGCATT+TGG | 0.421394 | 1.3:+41757935 | None:intergenic |
| GCCGCTGAATTAGGGTCGGC+GGG | 0.424159 | 1.3:+41759917 | None:intergenic |
| AGTTCTGGTGTTGTTGGTGG+TGG | 0.426204 | 1.3:+41760062 | None:intergenic |
| CGTGTTCCCGGTGGTGGGTC+GGG | 0.429809 | 1.3:-41759824 | MS.gene41037:CDS |
| AGTGGAGAAGGTGGTTCTGT+TGG | 0.435026 | 1.3:-41759620 | MS.gene41037:CDS |
| TTGGGAGAAGATGATAGCTT+TGG | 0.441809 | 1.3:-41757784 | MS.gene41037:CDS |
| CATGTGTTTGTCTGAATCCT+TGG | 0.446993 | 1.3:+41757327 | None:intergenic |
| GAATCTTCAACTGCGGTTAG+TGG | 0.448461 | 1.3:-41759638 | MS.gene41037:CDS |
| GCGTGTTCCCGGTGGTGGGT+CGG | 0.449146 | 1.3:-41759825 | MS.gene41037:CDS |
| CACATGCTTGCAAAACAAAC+AGG | 0.449703 | 1.3:-41757310 | MS.gene41037:CDS |
| CTGGTGTTGTTGGTGGTGGA+GGG | 0.450438 | 1.3:+41760066 | None:intergenic |
| AGAGCTGCGAATAAGAGTTT+GGG | 0.451616 | 1.3:-41757802 | MS.gene41037:CDS |
| AGCTTTGGTGGCAAAATTGA+AGG | 0.452290 | 1.3:-41757769 | MS.gene41037:CDS |
| AATCTTCCGATTTCCTCCAT+TGG | 0.452740 | 1.3:+41756655 | None:intergenic |
| AGAACAGAAACAGATCTTTC+GGG | 0.455936 | 1.3:+41757646 | None:intergenic |
| TTGGTGGTGGTGATGGAAAT+GGG | 0.457024 | 1.3:-41759601 | MS.gene41037:CDS |
| GAGGTCTCCAAGCATTATGA+TGG | 0.458928 | 1.3:+41757680 | None:intergenic |
| AGCCTTCATGCTCAAGGGTC+GGG | 0.462818 | 1.3:-41759857 | MS.gene41037:CDS |
| AGAGATGGTTATTGTTTCAT+GGG | 0.464621 | 1.3:-41756715 | MS.gene41037:CDS |
| GGAGAAGATGATAGCTTTGG+TGG | 0.464797 | 1.3:-41757781 | MS.gene41037:CDS |
| TGGAGATTGTTTGTAGCGCT+AGG | 0.469541 | 1.3:+41757866 | None:intergenic |
| AATGGTGTTTCACTCACTCT+TGG | 0.469626 | 1.3:-41756592 | MS.gene41037:CDS |
| TTTGCTTGATTTGTTGTCCT+CGG | 0.470961 | 1.3:+41757056 | None:intergenic |
| ATGTACATTTCCTCCACCAT+TGG | 0.475080 | 1.3:+41757111 | None:intergenic |
| CATTCAACTAGGAAGAAGAT+TGG | 0.477777 | 1.3:-41756512 | MS.gene41037:CDS |
| CAAAGAGCTATTCAACAATT+GGG | 0.478974 | 1.3:-41757709 | MS.gene41037:CDS |
| GAGATAAGTTCTGGTGTTGT+TGG | 0.480326 | 1.3:+41760056 | None:intergenic |
| CAATATCCAATGGAGGAAAT+CGG | 0.481438 | 1.3:-41756661 | MS.gene41037:CDS |
| GTTTGTCGGGGTCCCACTCT+CGG | 0.481951 | 1.3:-41760020 | MS.gene41037:CDS |
| TGAAGCTACACGCTCTACTC+AGG | 0.486069 | 1.3:-41759891 | MS.gene41037:CDS |
| TCGGTGATTGAAGAATTTCA+TGG | 0.493060 | 1.3:+41756812 | None:intergenic |
| GAAGGTGGTTCTGTTGGTGG+TGG | 0.495223 | 1.3:-41759614 | MS.gene41037:CDS |
| GTGGCAAAATTGAAGGGTCT+AGG | 0.499962 | 1.3:-41757762 | MS.gene41037:CDS |
| AGACGAACCCGACCCACCAC+CGG | 0.506148 | 1.3:+41759817 | None:intergenic |
| GAATGATCCATCATAATGCT+TGG | 0.508715 | 1.3:-41757687 | MS.gene41037:CDS |
| TTCCAAACAAGACATTCCTA+TGG | 0.509814 | 1.3:-41756950 | MS.gene41037:CDS |
| CACGCGCCACCACAGTTTGT+CGG | 0.511030 | 1.3:-41760034 | MS.gene41037:CDS |
| AATGTACATGGAAGAGATGA+AGG | 0.518111 | 1.3:-41757097 | MS.gene41037:CDS |
| CATAATAATTCAGAAATCCA+AGG | 0.518498 | 1.3:-41760226 | MS.gene41037:CDS |
| GACGAACCCGACCCACCACC+GGG | 0.520370 | 1.3:+41759818 | None:intergenic |
| CAATTCAGGATTCAGCTTCA+CGG | 0.521074 | 1.3:-41756878 | MS.gene41037:CDS |
| CGCCGCTGAATTAGGGTCGG+CGG | 0.525952 | 1.3:+41759916 | None:intergenic |
| TCATGAAAATGAGTGTTTGA+AGG | 0.530375 | 1.3:+41760191 | None:intergenic |
| TCATTAAGCCTTCATGCTCA+AGG | 0.532990 | 1.3:-41759863 | MS.gene41037:CDS |
| ATGTGTTTGTCTGAATCCTT+GGG | 0.538305 | 1.3:+41757328 | None:intergenic |
| ATAAGTTCTGGTGTTGTTGG+TGG | 0.538740 | 1.3:+41760059 | None:intergenic |
| AACAGGACTTACTAGGAGCC+AGG | 0.541927 | 1.3:-41757293 | MS.gene41037:intron |
| TTGTAGCGCTAGGGCAGTGT+AGG | 0.542393 | 1.3:+41757876 | None:intergenic |
| TCATGCTCAAGGGTCGGGTG+AGG | 0.545565 | 1.3:-41759852 | MS.gene41037:CDS |
| TCAACTGCGGTTAGTGGAGA+AGG | 0.547613 | 1.3:-41759632 | MS.gene41037:CDS |
| TTATTATTACCTGAAAACCT+TGG | 0.548405 | 1.3:+41756613 | None:intergenic |
| ATTCGCAGCTCTAATTTGGC+CGG | 0.548463 | 1.3:+41757813 | None:intergenic |
| GTTAATTAACATGCTTGATG+AGG | 0.549695 | 1.3:-41759519 | MS.gene41037:intron |
| CACCCGACCCTTGAGCATGA+AGG | 0.550382 | 1.3:+41759855 | None:intergenic |
| ACGCGCGTGTTCCCGGTGGT+GGG | 0.552059 | 1.3:-41759829 | MS.gene41037:CDS |
| TCGGGTTCGTCTGCTTCAAA+CGG | 0.552442 | 1.3:-41759806 | MS.gene41037:CDS |
| GGAGATTGTTTGTAGCGCTA+GGG | 0.553654 | 1.3:+41757867 | None:intergenic |
| GTGGCGCGTGAGATAAGTTC+TGG | 0.557053 | 1.3:+41760047 | None:intergenic |
| AAGCCTTCATGCTCAAGGGT+CGG | 0.560882 | 1.3:-41759858 | MS.gene41037:CDS |
| AGTTCGTCTTTGGAAACCAA+TGG | 0.560987 | 1.3:-41757127 | MS.gene41037:CDS |
| GATGATAGACAAAGTAGAGA+TGG | 0.562540 | 1.3:-41756730 | MS.gene41037:CDS |
| ACACCAATAGGTGAAGTTGA+TGG | 0.562831 | 1.3:+41756913 | None:intergenic |
| GAAGTTGTTAATGTTAATGG+TGG | 0.567999 | 1.3:-41759713 | MS.gene41037:CDS |
| CTTCAAACGGCTGTGTTTCG+GGG | 0.569323 | 1.3:-41759793 | MS.gene41037:CDS |
| TCTTTGGAAACCAATGGTGG+AGG | 0.574109 | 1.3:-41757121 | MS.gene41037:CDS |
| GAAGGCCGTCAGAACCACCT+TGG | 0.574186 | 1.3:+41760209 | None:intergenic |
| ATGAAGGATCAAGAGCTGAA+TGG | 0.575119 | 1.3:-41757081 | MS.gene41037:CDS |
| GAAATCCAAGGTGGTTCTGA+CGG | 0.578996 | 1.3:-41760214 | MS.gene41037:CDS |
| CCAAACCAAAACATTCAACT+AGG | 0.581717 | 1.3:-41756523 | MS.gene41037:CDS |
| CGCGCATGCAGTACAACATG+TGG | 0.583615 | 1.3:-41759943 | MS.gene41037:CDS |
| CATTAAGCCTTCATGCTCAA+GGG | 0.585270 | 1.3:-41759862 | MS.gene41037:CDS |
| GTTTGATTTCAGTTATCCCA+AGG | 0.588172 | 1.3:-41757344 | MS.gene41037:intron |
| TGTTGTACTGCATGCGCGGT+GGG | 0.595977 | 1.3:+41759948 | None:intergenic |
| AAGCAAGTCCAAAGCGAACG+AGG | 0.604196 | 1.3:-41756837 | MS.gene41037:CDS |
| AATGGTGGAGGAAATGTACA+TGG | 0.609719 | 1.3:-41757109 | MS.gene41037:CDS |
| TGTTGGAGAATCTTCAACTG+CGG | 0.611838 | 1.3:-41759645 | MS.gene41037:CDS |
| CCCCGCCGACCCTAATTCAG+CGG | 0.612266 | 1.3:-41759918 | MS.gene41037:CDS |
| TGGTTTCGGTCAATATCCAA+TGG | 0.615136 | 1.3:-41756671 | MS.gene41037:CDS |
| TCGTCTTTGGAAACCAATGG+TGG | 0.617524 | 1.3:-41757124 | MS.gene41037:CDS |
| ACGCGCCGCTGAATTAGGGT+CGG | 0.621487 | 1.3:+41759913 | None:intergenic |
| GAAGCTACACGCTCTACTCA+GGG | 0.622420 | 1.3:-41759890 | MS.gene41037:CDS |
| TTTCATCGAAGGATCGTCAT+CGG | 0.623127 | 1.3:+41757029 | None:intergenic |
| GAGGTTGGAACTCTTTCTTG+TGG | 0.623921 | 1.3:+41756997 | None:intergenic |
| GCTTTGGTGGCAAAATTGAA+GGG | 0.625009 | 1.3:-41757768 | MS.gene41037:CDS |
| AAGTTGTTAATGTTAATGGT+GGG | 0.628751 | 1.3:-41759712 | MS.gene41037:CDS |
| GCAAAGCAGAAACCTCATGA+TGG | 0.629561 | 1.3:+41759978 | None:intergenic |
| ATATCACAACCAAATGCAGA+TGG | 0.632389 | 1.3:-41757944 | MS.gene41037:CDS |
| ACTGATTGTTCTGCCGAGAG+TGG | 0.632701 | 1.3:+41760007 | None:intergenic |
| TCGGCAGAACAATCAGTACA+TGG | 0.633689 | 1.3:-41760001 | MS.gene41037:CDS |
| CACATGTTGTACTGCATGCG+CGG | 0.634344 | 1.3:+41759944 | None:intergenic |
| AGTGGGACCCCGACAAACTG+TGG | 0.634422 | 1.3:+41760025 | None:intergenic |
| ATCAGTACATGGCCATCATG+AGG | 0.634995 | 1.3:-41759990 | MS.gene41037:CDS |
| CTGATTGTTCTGCCGAGAGT+GGG | 0.636072 | 1.3:+41760008 | None:intergenic |
| ATGCGGAACAATTTGCACCA+AGG | 0.636094 | 1.3:-41756630 | MS.gene41037:CDS |
| TCCTGCAACTTGTTCAAACG+AGG | 0.638911 | 1.3:+41757915 | None:intergenic |
| TCAACATGCAGAATCCAAAG+AGG | 0.639986 | 1.3:-41756438 | MS.gene41037:CDS |
| CGCGCCACCACAGTTTGTCG+GGG | 0.645914 | 1.3:-41760032 | MS.gene41037:CDS |
| GGTGTTGAAACTGAAACCAT+AGG | 0.645975 | 1.3:+41756934 | None:intergenic |
| ACTGCGGTTAGTGGAGAAGG+TGG | 0.650559 | 1.3:-41759629 | MS.gene41037:CDS |
| GGTGGAGGGAAGTGTTGCCG+GGG | 0.656423 | 1.3:+41760080 | None:intergenic |
| TCAAGAGCTGAATGGTTCCG+AGG | 0.663324 | 1.3:-41757073 | MS.gene41037:CDS |
| GGAAATCGGAAGATTTGATG+CGG | 0.664371 | 1.3:-41756647 | MS.gene41037:CDS |
| CCTGATAATGTGTCACAATG+AGG | 0.665244 | 1.3:+41756565 | None:intergenic |
| GGGACCCCGACAAACTGTGG+TGG | 0.673955 | 1.3:+41760028 | None:intergenic |
| ACAAGAAAGAGTTCCAACCT+CGG | 0.675024 | 1.3:-41756995 | MS.gene41037:CDS |
| AAAATCCGGTAACAATTGTG+CGG | 0.678724 | 1.3:+41756411 | None:intergenic |
| ATGTTGTACTGCATGCGCGG+TGG | 0.691285 | 1.3:+41759947 | None:intergenic |
| AATGCTTGGAGACCTCAAAG+AGG | 0.697679 | 1.3:-41757673 | MS.gene41037:CDS |
| TTTCGGTCAATATCCAATGG+AGG | 0.697787 | 1.3:-41756668 | MS.gene41037:CDS |
| GAGGACGCGCGTGTTCCCGG+TGG | 0.701866 | 1.3:-41759833 | MS.gene41037:CDS |
| AATAATTCAGAAATCCAAGG+TGG | 0.720775 | 1.3:-41760223 | MS.gene41037:CDS |
| AACTCAGCTACCAATCACCC+CGG | 0.724910 | 1.3:-41760097 | MS.gene41037:intron |
| CCGCTGAATTAGGGTCGGCG+GGG | 0.731123 | 1.3:+41759918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAGGATAAAAAAA+CGG | + | chr1.3:41757831-41757850 | None:intergenic | 10.0% |
| !! | AAAAAAGGATAAAAAAAAAA+CGG | + | chr1.3:41757828-41757847 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAAAATATGCAA+AGG | - | chr1.3:41757711-41757730 | MS.gene41037:CDS | 10.0% |
| !! | CAAAAAAAAAAAACAATATT+AGG | + | chr1.3:41757215-41757234 | None:intergenic | 10.0% |
| !! | TTAAAAAATTACTAAATTGA+CGG | + | chr1.3:41759171-41759190 | None:intergenic | 10.0% |
| !!! | AAAAATCTAAACTAAAATTT+TGG | + | chr1.3:41758148-41758167 | None:intergenic | 10.0% |
| !!! | ACTCAAATTTATTTAATTTT+TGG | - | chr1.3:41757522-41757541 | MS.gene41037:intron | 10.0% |
| !!! | TAAATTAACATTTTAGTTTT+TGG | - | chr1.3:41759101-41759120 | MS.gene41037:intron | 10.0% |
| !!! | TATTTTTCTTTTTTTTTTTG+TGG | + | chr1.3:41758283-41758302 | None:intergenic | 10.0% |
| !!! | TTATCCTTTTTTTTTTTTTA+AGG | - | chr1.3:41757836-41757855 | MS.gene41037:CDS | 10.0% |
| !!! | TTTTTTATCCTTTTTTTTTA+AGG | - | chr1.3:41757934-41757953 | MS.gene41037:CDS | 10.0% |
| !! | AAAAAAAATTAAAGTTGTAC+TGG | - | chr1.3:41758505-41758524 | MS.gene41037:intron | 15.0% |
| !! | AATTGTTTCCTTAAAAAAAA+AGG | + | chr1.3:41757847-41757866 | None:intergenic | 15.0% |
| !! | ATACTAAAAATGAATTAATG+TGG | - | chr1.3:41758630-41758649 | MS.gene41037:intron | 15.0% |
| !! | GTTTCCTTAAAAAAAAAAAA+AGG | + | chr1.3:41757843-41757862 | None:intergenic | 15.0% |
| !! | TTGTTTCCTTAAAAAAAAAA+CGG | + | chr1.3:41757845-41757864 | None:intergenic | 15.0% |
| !!! | AGAATTTATGTTTTTTAGAA+TGG | - | chr1.3:41757423-41757442 | MS.gene41037:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr1.3:41758545-41758564 | MS.gene41037:intron | 15.0% |
| !!! | GAGTTAATTAAATTTAGTTT+TGG | - | chr1.3:41757155-41757174 | MS.gene41037:CDS | 15.0% |
| !!! | TCTATCATTTTAAAATTCTA+AGG | - | chr1.3:41758180-41758199 | MS.gene41037:intron | 15.0% |
| !!! | TTACTTTTTAAGTATGATTA+AGG | - | chr1.3:41757391-41757410 | MS.gene41037:intron | 15.0% |
| !!! | TTTTATGATACTATTAGAAA+AGG | - | chr1.3:41759071-41759090 | MS.gene41037:intron | 15.0% |
| !! | AAATGGAATGAAATAATCAT+TGG | - | chr1.3:41758379-41758398 | MS.gene41037:intron | 20.0% |
| !! | AATTTGATAGGAACTAAATT+TGG | + | chr1.3:41757252-41757271 | None:intergenic | 20.0% |
| !! | GAACAAATTTCAATGAAATT+TGG | - | chr1.3:41759889-41759908 | MS.gene41037:CDS | 20.0% |
| !! | TATTGATCATGTTAACAATA+TGG | - | chr1.3:41759462-41759481 | MS.gene41037:intron | 20.0% |
| !! | TTAATTCATGTTTGATTCTA+TGG | + | chr1.3:41757630-41757649 | None:intergenic | 20.0% |
| !!! | ATTATTAGTTGTTGTTTCAT+TGG | + | chr1.3:41759869-41759888 | None:intergenic | 20.0% |
| !!! | TCTAAACTAAAATTTTGGAA+AGG | + | chr1.3:41758143-41758162 | None:intergenic | 20.0% |
| !!! | TCTTGCAAATACTTTTTTTA+TGG | + | chr1.3:41758238-41758257 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTAATAAAGTA+AGG | + | chr1.3:41758428-41758447 | None:intergenic | 20.0% |
| !!! | TGTTCATTGGTTTTTTTTTT+TGG | + | chr1.3:41758004-41758023 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTGATGGT+CGG | + | chr1.3:41757780-41757799 | None:intergenic | 20.0% |
| ! | AAAAAAAATATGCAAAGGTC+CGG | - | chr1.3:41757716-41757735 | MS.gene41037:CDS | 25.0% |
| ! | AAGTTGTTAATGTTAATGGT+GGG | - | chr1.3:41756931-41756950 | MS.gene41037:CDS | 25.0% |
| ! | ATGAATTAATGTGGTTTCTT+TGG | - | chr1.3:41758639-41758658 | MS.gene41037:intron | 25.0% |
| ! | CATAATAATTCAGAAATCCA+AGG | - | chr1.3:41756417-41756436 | MS.gene41037:CDS | 25.0% |
| ! | CTTGAAAGAACAAATTTGAT+AGG | + | chr1.3:41757264-41757283 | None:intergenic | 25.0% |
| ! | GATGAAGTTGTTAATGTTAA+TGG | - | chr1.3:41756927-41756946 | MS.gene41037:CDS | 25.0% |
| ! | TGTTTAAAAGATGCAATTAC+CGG | - | chr1.3:41758811-41758830 | MS.gene41037:intron | 25.0% |
| ! | TTATTATTACCTGAAAACCT+TGG | + | chr1.3:41760033-41760052 | None:intergenic | 25.0% |
| ! | TTGACACATAGATTAAGAAA+TGG | - | chr1.3:41758362-41758381 | MS.gene41037:intron | 25.0% |
| ! | TTTGAGAAAAATAAGGTTGT+TGG | - | chr1.3:41756981-41757000 | MS.gene41037:CDS | 25.0% |
| !! | AAAAAAAAACGGATTTGGAT+TGG | + | chr1.3:41758031-41758050 | None:intergenic | 25.0% |
| !! | AAAGGATAAAAAAACGGATT+CGG | + | chr1.3:41757927-41757946 | None:intergenic | 25.0% |
| !! | CCTTAAAAAAAAAACGGATT+TGG | + | chr1.3:41758036-41758055 | None:intergenic | 25.0% |
| !! | GAATGGTTTTTATGCAAAAT+AGG | - | chr1.3:41757468-41757487 | MS.gene41037:intron | 25.0% |
| !! | GATATATTCAGGTCTTTTAT+TGG | - | chr1.3:41759255-41759274 | MS.gene41037:intron | 25.0% |
| !! | GGATAAAAAAAAAACGGATT+CGG | + | chr1.3:41757822-41757841 | None:intergenic | 25.0% |
| !! | TTTTAAACATCGAAATTGCT+TGG | + | chr1.3:41758800-41758819 | None:intergenic | 25.0% |
| !!! | ACTAAAATTTTGGAAAGGAA+AGG | + | chr1.3:41758138-41758157 | None:intergenic | 25.0% |
| !!! | AGGTTTTCAGGTAATAATAA+TGG | - | chr1.3:41760033-41760052 | MS.gene41037:CDS | 25.0% |
| !!! | ATTGGTAATTTTTTTTGTGG+TGG | + | chr1.3:41757904-41757923 | None:intergenic | 25.0% |
| !!! | CCAAATCCGTTTTTTTTTTA+AGG | - | chr1.3:41758033-41758052 | MS.gene41037:intron | 25.0% |
| !!! | GAAGAGTTTTGAGAAAAATA+AGG | - | chr1.3:41756974-41756993 | MS.gene41037:CDS | 25.0% |
| !!! | TCATTGGTTTTTTTTTTTGG+TGG | + | chr1.3:41758001-41758020 | None:intergenic | 25.0% |
| !!! | TGGGTTTTTTTTTTTTGTGA+TGG | + | chr1.3:41757784-41757803 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTGACAGATAGAA+TGG | - | chr1.3:41757451-41757470 | MS.gene41037:intron | 25.0% |
| !!! | TTGTTTGGAATTGAAACTTT+TGG | + | chr1.3:41759683-41759702 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGTGATGGTC+GGG | + | chr1.3:41757779-41757798 | None:intergenic | 25.0% |
| AAAAAAATATGCAAAGGTCC+GGG | - | chr1.3:41757717-41757736 | MS.gene41037:CDS | 30.0% | |
| AACCAAACTAATTTCATTGC+TGG | - | chr1.3:41759952-41759971 | MS.gene41037:CDS | 30.0% | |
| AACCAGCAATGAAATTAGTT+TGG | + | chr1.3:41759957-41759976 | None:intergenic | 30.0% | |
| AAGAACAGAAACAGATCTTT+CGG | + | chr1.3:41759001-41759020 | None:intergenic | 30.0% | |
| AATAATTCAGAAATCCAAGG+TGG | - | chr1.3:41756420-41756439 | MS.gene41037:CDS | 30.0% | |
| ACAAAGAGCTATTCAACAAT+TGG | - | chr1.3:41758933-41758952 | MS.gene41037:intron | 30.0% | |
| AGAGATGGTTATTGTTTCAT+GGG | - | chr1.3:41759928-41759947 | MS.gene41037:CDS | 30.0% | |
| ATATGGTACAGGTTTCAAAT+TGG | - | chr1.3:41759479-41759498 | MS.gene41037:intron | 30.0% | |
| ATTAGCGAAACAAATGAGTT+TGG | - | chr1.3:41760156-41760175 | MS.gene41037:intron | 30.0% | |
| ATTCATGTTTGATTCTATGG+TGG | + | chr1.3:41757627-41757646 | None:intergenic | 30.0% | |
| CAAAGAGCTATTCAACAATT+GGG | - | chr1.3:41758934-41758953 | MS.gene41037:intron | 30.0% | |
| CACTTAATAAAGAAGTAAGG+AGG | + | chr1.3:41759379-41759398 | None:intergenic | 30.0% | |
| CGACACTTAATAAAGAAGTA+AGG | + | chr1.3:41759382-41759401 | None:intergenic | 30.0% | |
| GAAGTTGTTAATGTTAATGG+TGG | - | chr1.3:41756930-41756949 | MS.gene41037:CDS | 30.0% | |
| GTGAATGTTAGAAACAATTC+AGG | - | chr1.3:41759751-41759770 | MS.gene41037:CDS | 30.0% | |
| GTTAATTAACATGCTTGATG+AGG | - | chr1.3:41757124-41757143 | MS.gene41037:CDS | 30.0% | |
| TAGAGATGGTTATTGTTTCA+TGG | - | chr1.3:41759927-41759946 | MS.gene41037:CDS | 30.0% | |
| TCATGAAAATGAGTGTTTGA+AGG | + | chr1.3:41756455-41756474 | None:intergenic | 30.0% | |
| TCATGTTAACAATATGGTAC+AGG | - | chr1.3:41759468-41759487 | MS.gene41037:intron | 30.0% | |
| TCATTGAAGTCGATATATTC+AGG | - | chr1.3:41759244-41759263 | MS.gene41037:intron | 30.0% | |
| TTTCTAACATTCACACCAAT+AGG | + | chr1.3:41759745-41759764 | None:intergenic | 30.0% | |
| ! | AAAAAAAAACGGATTCGGAT+TGG | + | chr1.3:41757817-41757836 | None:intergenic | 30.0% |
| ! | AAAAGTATAGCGAGTACTTA+CGG | + | chr1.3:41759054-41759073 | None:intergenic | 30.0% |
| ! | ATAAAAAAACGGATTCGGAT+TGG | + | chr1.3:41757922-41757941 | None:intergenic | 30.0% |
| ! | GTTCTTTCAAGTAATTGAGT+TGG | - | chr1.3:41757273-41757292 | MS.gene41037:intron | 30.0% |
| ! | TAATGTTAATGGTGGGATTA+AGG | - | chr1.3:41756938-41756957 | MS.gene41037:CDS | 30.0% |
| ! | TTCTTCCTAGTTGAATGTTT+TGG | + | chr1.3:41760128-41760147 | None:intergenic | 30.0% |
| !! | AAAATTTTGGAAAGGAAAGG+AGG | + | chr1.3:41758135-41758154 | None:intergenic | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr1.3:41758571-41758590 | MS.gene41037:intron | 30.0% |
| !! | ACTAATTTCATTGCTGGTTT+CGG | - | chr1.3:41759958-41759977 | MS.gene41037:CDS | 30.0% |
| !! | TTGGATTGGTAATTGTTCAT+TGG | + | chr1.3:41758017-41758036 | None:intergenic | 30.0% |
| !!! | CGGATTGGTAATTTTTTTTG+TGG | + | chr1.3:41757907-41757926 | None:intergenic | 30.0% |
| !!! | GTTTTTGGAATTGAAAGAGT+CGG | - | chr1.3:41759116-41759135 | MS.gene41037:intron | 30.0% |
| !!! | TGGTTTTTTTTTTTGGTGGT+CGG | + | chr1.3:41757997-41758016 | None:intergenic | 30.0% |
| !!! | TTTGGATTGTTTTGGTTTGA+AGG | - | chr1.3:41758657-41758676 | MS.gene41037:intron | 30.0% |
| !!! | TTTTTTTTTTGTGATGGTCG+GGG | + | chr1.3:41757778-41757797 | None:intergenic | 30.0% |
| AAAAAATATGCAAAGGTCCG+GGG | - | chr1.3:41757718-41757737 | MS.gene41037:CDS | 35.0% | |
| AAAATCCGGTAACAATTGTG+CGG | + | chr1.3:41760235-41760254 | None:intergenic | 35.0% | |
| AAACAATTACCAATCCTGCA+AGG | - | chr1.3:41757859-41757878 | MS.gene41037:CDS | 35.0% | |
| AAAGTTTGAGAGGGTAAAGT+TGG | - | chr1.3:41758481-41758500 | MS.gene41037:intron | 35.0% | |
| AATGTACATGGAAGAGATGA+AGG | - | chr1.3:41759546-41759565 | MS.gene41037:CDS | 35.0% | |
| ACGGACGTTAAACTATTCAA+AGG | + | chr1.3:41759152-41759171 | None:intergenic | 35.0% | |
| AGAACAGAAACAGATCTTTC+GGG | + | chr1.3:41759000-41759019 | None:intergenic | 35.0% | |
| ATATCACAACCAAATGCAGA+TGG | - | chr1.3:41758699-41758718 | MS.gene41037:intron | 35.0% | |
| ATGTGTTTGTCTGAATCCTT+GGG | + | chr1.3:41759318-41759337 | None:intergenic | 35.0% | |
| CAAAACAAACAGGACTTACT+AGG | - | chr1.3:41759343-41759362 | MS.gene41037:intron | 35.0% | |
| CAATATCCAATGGAGGAAAT+CGG | - | chr1.3:41759982-41760001 | MS.gene41037:CDS | 35.0% | |
| CATTCAACTAGGAAGAAGAT+TGG | - | chr1.3:41760131-41760150 | MS.gene41037:intron | 35.0% | |
| CCAAACCAAAACATTCAACT+AGG | - | chr1.3:41760120-41760139 | MS.gene41037:intron | 35.0% | |
| GAATGATCCATCATAATGCT+TGG | - | chr1.3:41758956-41758975 | MS.gene41037:intron | 35.0% | |
| GAGTAATTGATGTAACCTGA+TGG | + | chr1.3:41756480-41756499 | None:intergenic | 35.0% | |
| GATGATAGACAAAGTAGAGA+TGG | - | chr1.3:41759913-41759932 | MS.gene41037:CDS | 35.0% | |
| GTTGAGAAAAACAAGGTTAC+CGG | + | chr1.3:41756529-41756548 | None:intergenic | 35.0% | |
| TCATTGGACTTCACATGATT+CGG | + | chr1.3:41759853-41759872 | None:intergenic | 35.0% | |
| TCGGTGATTGAAGAATTTCA+TGG | + | chr1.3:41759834-41759853 | None:intergenic | 35.0% | |
| TGTGAGAGAAAAGTTTGAGA+GGG | - | chr1.3:41758472-41758491 | MS.gene41037:intron | 35.0% | |
| TGTGCTAGTAACAAGTGAAA+TGG | - | chr1.3:41758103-41758122 | MS.gene41037:intron | 35.0% | |
| TTCCAAACAAGACATTCCTA+TGG | - | chr1.3:41759693-41759712 | MS.gene41037:CDS | 35.0% | |
| TTTGAACAAGTTGCAGGAAT+TGG | - | chr1.3:41758733-41758752 | MS.gene41037:intron | 35.0% | |
| ! | AACCATAGGAATGTCTTGTT+TGG | + | chr1.3:41759698-41759717 | None:intergenic | 35.0% |
| ! | ACAATTGTTACCGGATTTTG+TGG | - | chr1.3:41760236-41760255 | MS.gene41037:CDS | 35.0% |
| ! | CTCATTTTCATGAATCCATC+AGG | - | chr1.3:41756462-41756481 | MS.gene41037:CDS | 35.0% |
| ! | GTGGTTTCTTTGGATTGTTT+TGG | - | chr1.3:41758649-41758668 | MS.gene41037:intron | 35.0% |
| ! | GTTTGATTTCAGTTATCCCA+AGG | - | chr1.3:41759299-41759318 | MS.gene41037:intron | 35.0% |
| ! | TAGCTGAGTTGAGAAAAACA+AGG | + | chr1.3:41756536-41756555 | None:intergenic | 35.0% |
| ! | TCTTATTCGCAGCTCTAATT+TGG | + | chr1.3:41758837-41758856 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.3:41758336-41758355 | None:intergenic | 35.0% |
| !! | CAAGTAATTGAGTTGGTAAC+TGG | - | chr1.3:41757280-41757299 | MS.gene41037:intron | 35.0% |
| !! | TCGGATTGGTAATTGTTCAT+GGG | + | chr1.3:41757803-41757822 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr1.3:41758337-41758356 | MS.gene41037:intron | 35.0% |
| !! | TTCGGATTGGTAATTGTTCA+TGG | + | chr1.3:41757804-41757823 | None:intergenic | 35.0% |
| !! | TTTGCTTGATTTGTTGTCCT+CGG | + | chr1.3:41759590-41759609 | None:intergenic | 35.0% |
| !!! | AATTTTTTTTGTGGTGGCTG+AGG | + | chr1.3:41757898-41757917 | None:intergenic | 35.0% |
| !!! | CCTAGTTGAATGTTTTGGTT+TGG | + | chr1.3:41760123-41760142 | None:intergenic | 35.0% |
| !!! | GGTTTTTTTTTTTGGTGGTC+GGG | + | chr1.3:41757996-41758015 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTTTTGGTGGTCG+GGG | + | chr1.3:41757995-41758014 | None:intergenic | 35.0% |
| AATCTTCCGATTTCCTCCAT+TGG | + | chr1.3:41759991-41760010 | None:intergenic | 40.0% | |
| AATGGTGTTTCACTCACTCT+TGG | - | chr1.3:41760051-41760070 | MS.gene41037:CDS | 40.0% | |
| AATTACCAATCCTGCAAGGT+CGG | - | chr1.3:41757863-41757882 | MS.gene41037:CDS | 40.0% | |
| ACAAGAAAGAGTTCCAACCT+CGG | - | chr1.3:41759648-41759667 | MS.gene41037:CDS | 40.0% | |
| ACACCAATAGGTGAAGTTGA+TGG | + | chr1.3:41759733-41759752 | None:intergenic | 40.0% | |
| ACACCATCAACTTCACCTAT+TGG | - | chr1.3:41759727-41759746 | MS.gene41037:CDS | 40.0% | |
| AGAGCTGCGAATAAGAGTTT+GGG | - | chr1.3:41758841-41758860 | MS.gene41037:intron | 40.0% | |
| AGGAAATCACCATCTGCATT+TGG | + | chr1.3:41758711-41758730 | None:intergenic | 40.0% | |
| ATGAAGGATCAAGAGCTGAA+TGG | - | chr1.3:41759562-41759581 | MS.gene41037:CDS | 40.0% | |
| ATGCTCGCACTCGTTATTAA+AGG | + | chr1.3:41759410-41759429 | None:intergenic | 40.0% | |
| ATGTACATTTCCTCCACCAT+TGG | + | chr1.3:41759535-41759554 | None:intergenic | 40.0% | |
| CAATTCAGGATTCAGCTTCA+CGG | - | chr1.3:41759765-41759784 | MS.gene41037:CDS | 40.0% | |
| CACATGCTTGCAAAACAAAC+AGG | - | chr1.3:41759333-41759352 | MS.gene41037:intron | 40.0% | |
| CATGTGTTTGTCTGAATCCT+TGG | + | chr1.3:41759319-41759338 | None:intergenic | 40.0% | |
| CATTAAGCCTTCATGCTCAA+GGG | - | chr1.3:41756781-41756800 | MS.gene41037:CDS | 40.0% | |
| CCTCATTGTGACACATTATC+AGG | - | chr1.3:41760078-41760097 | MS.gene41037:CDS | 40.0% | |
| GGAAATCGGAAGATTTGATG+CGG | - | chr1.3:41759996-41760015 | MS.gene41037:CDS | 40.0% | |
| GGTGGTCATGGGTTTAATAA+AGG | + | chr1.3:41757653-41757672 | None:intergenic | 40.0% | |
| GTGTGAGAGAAAAGTTTGAG+AGG | - | chr1.3:41758471-41758490 | MS.gene41037:intron | 40.0% | |
| GTTGTGATCACTACTAGGAT+TGG | + | chr1.3:41758068-41758087 | None:intergenic | 40.0% | |
| TAAATGCTCGAGTTCGTCTT+TGG | - | chr1.3:41759506-41759525 | MS.gene41037:intron | 40.0% | |
| TAGAGCTGCGAATAAGAGTT+TGG | - | chr1.3:41758840-41758859 | MS.gene41037:intron | 40.0% | |
| TCAACATGCAGAATCCAAAG+AGG | - | chr1.3:41760205-41760224 | MS.gene41037:CDS | 40.0% | |
| TCATTAAGCCTTCATGCTCA+AGG | - | chr1.3:41756780-41756799 | MS.gene41037:CDS | 40.0% | |
| TGGTTTCGGTCAATATCCAA+TGG | - | chr1.3:41759972-41759991 | MS.gene41037:CDS | 40.0% | |
| TGTGAGTTGTGATCACTACT+AGG | + | chr1.3:41758073-41758092 | None:intergenic | 40.0% | |
| TGTTGGAGAATCTTCAACTG+CGG | - | chr1.3:41756998-41757017 | MS.gene41037:CDS | 40.0% | |
| TTGGGAGAAGATGATAGCTT+TGG | - | chr1.3:41758859-41758878 | MS.gene41037:intron | 40.0% | |
| TTTCATCGAAGGATCGTCAT+CGG | + | chr1.3:41759617-41759636 | None:intergenic | 40.0% | |
| TTTCGGTCAATATCCAATGG+AGG | - | chr1.3:41759975-41759994 | MS.gene41037:CDS | 40.0% | |
| ! | AATGGTGGAGGAAATGTACA+TGG | - | chr1.3:41759534-41759553 | MS.gene41037:CDS | 40.0% |
| ! | ACTTTTGGATTCTGTTTCCG+AGG | + | chr1.3:41759668-41759687 | None:intergenic | 40.0% |
| ! | AGCTTTGGTGGCAAAATTGA+AGG | - | chr1.3:41758874-41758893 | MS.gene41037:intron | 40.0% |
| ! | AGTTCGTCTTTGGAAACCAA+TGG | - | chr1.3:41759516-41759535 | MS.gene41037:intron | 40.0% |
| ! | CAATTTGCACCAAGGTTTTC+AGG | - | chr1.3:41760021-41760040 | MS.gene41037:CDS | 40.0% |
| ! | CCTGATAATGTGTCACAATG+AGG | + | chr1.3:41760081-41760100 | None:intergenic | 40.0% |
| ! | GCTTTGGTGGCAAAATTGAA+GGG | - | chr1.3:41758875-41758894 | MS.gene41037:intron | 40.0% |
| ! | GGTGTTGAAACTGAAACCAT+AGG | + | chr1.3:41759712-41759731 | None:intergenic | 40.0% |
| !! | ATAAGTTCTGGTGTTGTTGG+TGG | + | chr1.3:41756587-41756606 | None:intergenic | 40.0% |
| !! | GAGATAAGTTCTGGTGTTGT+TGG | + | chr1.3:41756590-41756609 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.3:41758575-41758594 | MS.gene41037:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.3:41758594-41758575 | None:intergenic | 40.0% |
| !!! | GGATTGTTTTGGTTTGAAGG+TGG | - | chr1.3:41758660-41758679 | MS.gene41037:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr1.3:41758574-41758593 | MS.gene41037:intron | 40.0% |
| AAAGAAGTAAGGAGGTCACC+TGG | + | chr1.3:41759371-41759390 | None:intergenic | 45.0% | |
| AATGCTTGGAGACCTCAAAG+AGG | - | chr1.3:41758970-41758989 | MS.gene41037:intron | 45.0% | |
| AATTGTGCGGCAAACCTCTT+TGG | + | chr1.3:41760222-41760241 | None:intergenic | 45.0% | |
| ATCAGTACATGGCCATCATG+AGG | - | chr1.3:41756653-41756672 | MS.gene41037:CDS | 45.0% | |
| ATGCGGAACAATTTGCACCA+AGG | - | chr1.3:41760013-41760032 | MS.gene41037:CDS | 45.0% | |
| ATTACCAATCCTGCAAGGTC+GGG | - | chr1.3:41757864-41757883 | MS.gene41037:CDS | 45.0% | |
| ATTACCAATCCTGCAAGGTC+TGG | - | chr1.3:41757864-41757883 | MS.gene41037:CDS | 45.0% | |
| CATGAGGTTTCTGCTTTGCA+TGG | - | chr1.3:41756669-41756688 | MS.gene41037:CDS | 45.0% | |
| GAATCTTCAACTGCGGTTAG+TGG | - | chr1.3:41757005-41757024 | MS.gene41037:CDS | 45.0% | |
| GAGGTCTCCAAGCATTATGA+TGG | + | chr1.3:41758966-41758985 | None:intergenic | 45.0% | |
| GAGGTTGGAACTCTTTCTTG+TGG | + | chr1.3:41759649-41759668 | None:intergenic | 45.0% | |
| GCAAAGCAGAAACCTCATGA+TGG | + | chr1.3:41756668-41756687 | None:intergenic | 45.0% | |
| GGAACTCTTTCTTGTGGAGT+TGG | + | chr1.3:41759643-41759662 | None:intergenic | 45.0% | |
| GGAGATTGTTTGTAGCGCTA+GGG | + | chr1.3:41758779-41758798 | None:intergenic | 45.0% | |
| GTATAGCGAGTACTTACGGA+TGG | + | chr1.3:41759050-41759069 | None:intergenic | 45.0% | |
| GTGGCAAAATTGAAGGGTCT+AGG | - | chr1.3:41758881-41758900 | MS.gene41037:intron | 45.0% | |
| GTTTGCCGCACAATTGTTAC+CGG | - | chr1.3:41760227-41760246 | MS.gene41037:CDS | 45.0% | |
| TCCTCGTTTGAACAAGTTGC+AGG | - | chr1.3:41758727-41758746 | MS.gene41037:intron | 45.0% | |
| TCGGCAGAACAATCAGTACA+TGG | - | chr1.3:41756642-41756661 | MS.gene41037:CDS | 45.0% | |
| TGCTTCAAACGGCTGTGTTT+CGG | - | chr1.3:41756848-41756867 | MS.gene41037:CDS | 45.0% | |
| TGGAGATTGTTTGTAGCGCT+AGG | + | chr1.3:41758780-41758799 | None:intergenic | 45.0% | |
| TTACCAATCCTGCAAGGTCT+GGG | - | chr1.3:41757865-41757884 | MS.gene41037:CDS | 45.0% | |
| TTCAGCTTCACGGAACTTGA+TGG | - | chr1.3:41759775-41759794 | MS.gene41037:CDS | 45.0% | |
| TTGGATTCTGTTTCCGAGGT+TGG | + | chr1.3:41759664-41759683 | None:intergenic | 45.0% | |
| ! | ATTCGCAGCTCTAATTTGGC+CGG | + | chr1.3:41758833-41758852 | None:intergenic | 45.0% |
| ! | TCCTGCAACTTGTTCAAACG+AGG | + | chr1.3:41758731-41758750 | None:intergenic | 45.0% |
| ! | TCGTCTTTGGAAACCAATGG+TGG | - | chr1.3:41759519-41759538 | MS.gene41037:intron | 45.0% |
| ! | TCTTTGGAAACCAATGGTGG+AGG | - | chr1.3:41759522-41759541 | MS.gene41037:CDS | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr1.3:41757681-41757700 | MS.gene41037:CDS | 45.0% |
| !! | CTGTTTCTGTTCTTCGTGCT+TGG | - | chr1.3:41759007-41759026 | MS.gene41037:intron | 45.0% |
| !! | GAAATCCAAGGTGGTTCTGA+CGG | - | chr1.3:41756429-41756448 | MS.gene41037:CDS | 45.0% |
| !! | GGAGAAGATGATAGCTTTGG+TGG | - | chr1.3:41758862-41758881 | MS.gene41037:intron | 45.0% |
| !! | TTGGTGGTGGTGATGGAAAT+GGG | - | chr1.3:41757042-41757061 | MS.gene41037:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.3:41758333-41758352 | None:intergenic | 45.0% |
| !!! | GGAGTTGGTGTTTTCATCGA+AGG | + | chr1.3:41759628-41759647 | None:intergenic | 45.0% |
| AAAACAAGGTTACCGGCGTG+TGG | + | chr1.3:41756522-41756541 | None:intergenic | 50.0% | |
| AACAGGACTTACTAGGAGCC+AGG | - | chr1.3:41759350-41759369 | MS.gene41037:intron | 50.0% | |
| AACTCAGCTACCAATCACCC+CGG | - | chr1.3:41756546-41756565 | MS.gene41037:CDS | 50.0% | |
| AAGCAAGTCCAAAGCGAACG+AGG | - | chr1.3:41759806-41759825 | MS.gene41037:CDS | 50.0% | |
| AAGCCTTCATGCTCAAGGGT+CGG | - | chr1.3:41756785-41756804 | MS.gene41037:CDS | 50.0% | |
| ACTGATTGTTCTGCCGAGAG+TGG | + | chr1.3:41756639-41756658 | None:intergenic | 50.0% | |
| CACATGTTGTACTGCATGCG+CGG | + | chr1.3:41756702-41756721 | None:intergenic | 50.0% | |
| CTGATTGTTCTGCCGAGAGT+GGG | + | chr1.3:41756638-41756657 | None:intergenic | 50.0% | |
| CTTCAAACGGCTGTGTTTCG+GGG | - | chr1.3:41756850-41756869 | MS.gene41037:CDS | 50.0% | |
| CTTTCGGGCAATCCTCTTTG+AGG | + | chr1.3:41758985-41759004 | None:intergenic | 50.0% | |
| GAAGCTACACGCTCTACTCA+GGG | - | chr1.3:41756753-41756772 | MS.gene41037:CDS | 50.0% | |
| GCTTCAAACGGCTGTGTTTC+GGG | - | chr1.3:41756849-41756868 | MS.gene41037:CDS | 50.0% | |
| TACCAATCCTGCAAGGTCTG+GGG | - | chr1.3:41757866-41757885 | MS.gene41037:CDS | 50.0% | |
| TCAACTGCGGTTAGTGGAGA+AGG | - | chr1.3:41757011-41757030 | MS.gene41037:CDS | 50.0% | |
| TCAAGAGCTGAATGGTTCCG+AGG | - | chr1.3:41759570-41759589 | MS.gene41037:CDS | 50.0% | |
| TCATGGTTCCTCGTTCGCTT+TGG | + | chr1.3:41759817-41759836 | None:intergenic | 50.0% | |
| TCGGGTTCGTCTGCTTCAAA+CGG | - | chr1.3:41756837-41756856 | MS.gene41037:CDS | 50.0% | |
| TGAAGCTACACGCTCTACTC+AGG | - | chr1.3:41756752-41756771 | MS.gene41037:CDS | 50.0% | |
| TTACCAATCCTGCAAGGTCG+GGG | - | chr1.3:41757963-41757982 | MS.gene41037:CDS | 50.0% | |
| ! | AGTGGAGAAGGTGGTTCTGT+TGG | - | chr1.3:41757023-41757042 | MS.gene41037:CDS | 50.0% |
| !! | AGTTCTGGTGTTGTTGGTGG+TGG | + | chr1.3:41756584-41756603 | None:intergenic | 50.0% |
| !! | GTTGGTGGTGGTGATGGAAA+TGG | - | chr1.3:41757041-41757060 | MS.gene41037:CDS | 50.0% |
| AAACCCCTGCCACCACAATC+CGG | - | chr1.3:41757744-41757763 | MS.gene41037:CDS | 55.0% | |
| AACCCCAGACCTTGCAGGAT+TGG | + | chr1.3:41757871-41757890 | None:intergenic | 55.0% | |
| ACTGCGGTTAGTGGAGAAGG+TGG | - | chr1.3:41757014-41757033 | MS.gene41037:CDS | 55.0% | |
| AGCCTTCATGCTCAAGGGTC+GGG | - | chr1.3:41756786-41756805 | MS.gene41037:CDS | 55.0% | |
| ATGTTGTACTGCATGCGCGG+TGG | + | chr1.3:41756699-41756718 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr1.3:41757679-41757698 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr1.3:41757676-41757695 | MS.gene41037:CDS | 55.0% | |
| CGCGCATGCAGTACAACATG+TGG | - | chr1.3:41756700-41756719 | MS.gene41037:CDS | 55.0% | |
| CTTCACGCGCCGCTGAATTA+GGG | + | chr1.3:41756737-41756756 | None:intergenic | 55.0% | |
| GTGGCGCGTGAGATAAGTTC+TGG | + | chr1.3:41756599-41756618 | None:intergenic | 55.0% | |
| TCACGAGGACAGGTGGTCAT+GGG | + | chr1.3:41757664-41757683 | None:intergenic | 55.0% | |
| TGAGCTAAGCTCACGAGGAC+AGG | + | chr1.3:41757674-41757693 | None:intergenic | 55.0% | |
| TGTTGTACTGCATGCGCGGT+GGG | + | chr1.3:41756698-41756717 | None:intergenic | 55.0% | |
| TTGTAGCGCTAGGGCAGTGT+AGG | + | chr1.3:41758770-41758789 | None:intergenic | 55.0% | |
| ! | GAAGGTGGTTCTGTTGGTGG+TGG | - | chr1.3:41757029-41757048 | MS.gene41037:CDS | 55.0% |
| ! | GGAGAAGGTGGTTCTGTTGG+TGG | - | chr1.3:41757026-41757045 | MS.gene41037:CDS | 55.0% |
| !! | CTGGTGTTGTTGGTGGTGGA+GGG | + | chr1.3:41756580-41756599 | None:intergenic | 55.0% |
| !! | GGTTCTGTTGGTGGTGGTGA+TGG | - | chr1.3:41757035-41757054 | MS.gene41037:CDS | 55.0% |
| !! | TCTGGTGTTGTTGGTGGTGG+AGG | + | chr1.3:41756581-41756600 | None:intergenic | 55.0% |
| AACCCCGGATTGTGGTGGCA+GGG | + | chr1.3:41757751-41757770 | None:intergenic | 60.0% | |
| AACCCCTGCCACCACAATCC+GGG | - | chr1.3:41757745-41757764 | MS.gene41037:CDS | 60.0% | |
| ACAAGGTTACCGGCGTGTGG+CGG | + | chr1.3:41756519-41756538 | None:intergenic | 60.0% | |
| ACGCGCCACCACAGTTTGTC+GGG | - | chr1.3:41756610-41756629 | MS.gene41037:CDS | 60.0% | |
| ACGCGCCGCTGAATTAGGGT+CGG | + | chr1.3:41756733-41756752 | None:intergenic | 60.0% | |
| AGTGGGACCCCGACAAACTG+TGG | + | chr1.3:41756621-41756640 | None:intergenic | 60.0% | |
| CACCCGACCCTTGAGCATGA+AGG | + | chr1.3:41756791-41756810 | None:intergenic | 60.0% | |
| CACGCGCCACCACAGTTTGT+CGG | - | chr1.3:41756609-41756628 | MS.gene41037:CDS | 60.0% | |
| CTCACGAGGACAGGTGGTCA+TGG | + | chr1.3:41757665-41757684 | None:intergenic | 60.0% | |
| GAACCCCGACCTTGCAGGAT+TGG | + | chr1.3:41757969-41757988 | None:intergenic | 60.0% | |
| GAAGGCCGTCAGAACCACCT+TGG | + | chr1.3:41756437-41756456 | None:intergenic | 60.0% | |
| GCTAAGCTCACGAGGACAGG+TGG | + | chr1.3:41757671-41757690 | None:intergenic | 60.0% | |
| GCTTCACGCGCCGCTGAATT+AGG | + | chr1.3:41756738-41756757 | None:intergenic | 60.0% | |
| GTTCGAACCCCAGACCTTGC+AGG | + | chr1.3:41757876-41757895 | None:intergenic | 60.0% | |
| GTTCGAACCCCGGATTGTGG+TGG | + | chr1.3:41757756-41757775 | None:intergenic | 60.0% | |
| GTTTGTCGGGGTCCCACTCT+CGG | - | chr1.3:41756623-41756642 | MS.gene41037:CDS | 60.0% | |
| TCATGCTCAAGGGTCGGGTG+AGG | - | chr1.3:41756791-41756810 | MS.gene41037:CDS | 60.0% | |
| !! | GGAAGTGTTGCCGGGGTGAT+TGG | + | chr1.3:41756559-41756578 | None:intergenic | 60.0% |
| !! | GTGGTGGAGGGAAGTGTTGC+CGG | + | chr1.3:41756568-41756587 | None:intergenic | 60.0% |
| !! | TGGTGGAGGGAAGTGTTGCC+GGG | + | chr1.3:41756567-41756586 | None:intergenic | 60.0% |
| ACCCCGGATTGTGGTGGCAG+GGG | + | chr1.3:41757750-41757769 | None:intergenic | 65.0% | |
| ACCCCTGCCACCACAATCCG+GGG | - | chr1.3:41757746-41757765 | MS.gene41037:CDS | 65.0% | |
| AGACGAACCCGACCCACCAC+CGG | + | chr1.3:41756829-41756848 | None:intergenic | 65.0% | |
| CCCCGCCGACCCTAATTCAG+CGG | - | chr1.3:41756725-41756744 | MS.gene41037:CDS | 65.0% | |
| CCGCTGAATTAGGGTCGGCG+GGG | + | chr1.3:41756728-41756747 | None:intergenic | 65.0% | |
| CGCCGCTGAATTAGGGTCGG+CGG | + | chr1.3:41756730-41756749 | None:intergenic | 65.0% | |
| CGCGCCACCACAGTTTGTCG+GGG | - | chr1.3:41756611-41756630 | MS.gene41037:CDS | 65.0% | |
| GAACCCCGGATTGTGGTGGC+AGG | + | chr1.3:41757752-41757771 | None:intergenic | 65.0% | |
| GATGGTCGGGGTTCGAACCC+CGG | + | chr1.3:41757766-41757785 | None:intergenic | 65.0% | |
| GCCGCTGAATTAGGGTCGGC+GGG | + | chr1.3:41756729-41756748 | None:intergenic | 65.0% | |
| GGGACCCCGACAAACTGTGG+TGG | + | chr1.3:41756618-41756637 | None:intergenic | 65.0% | |
| GGGGTTCGAACCCCGGATTG+TGG | + | chr1.3:41757759-41757778 | None:intergenic | 65.0% | |
| GGTGGCAGGGGTTTGAACCC+CGG | + | chr1.3:41757738-41757757 | None:intergenic | 65.0% | |
| GGTTCGAACCCCGACCTTGC+AGG | + | chr1.3:41757974-41757993 | None:intergenic | 65.0% | |
| !! | GGTGGAGGGAAGTGTTGCCG+GGG | + | chr1.3:41756566-41756585 | None:intergenic | 65.0% |
| ACGCGCGTGTTCCCGGTGGT+GGG | - | chr1.3:41756814-41756833 | MS.gene41037:CDS | 70.0% | |
| AGGTTACCGGCGTGTGGCGG+CGG | + | chr1.3:41756516-41756535 | None:intergenic | 70.0% | |
| GACGAACCCGACCCACCACC+GGG | + | chr1.3:41756828-41756847 | None:intergenic | 70.0% | |
| GGTGAGGACGCGCGTGTTCC+CGG | - | chr1.3:41756807-41756826 | MS.gene41037:CDS | 70.0% | |
| !! | CGTGTTCCCGGTGGTGGGTC+GGG | - | chr1.3:41756819-41756838 | MS.gene41037:CDS | 70.0% |
| !! | GCGTGTTCCCGGTGGTGGGT+CGG | - | chr1.3:41756818-41756837 | MS.gene41037:CDS | 70.0% |
| GACGCGCGTGTTCCCGGTGG+TGG | - | chr1.3:41756813-41756832 | MS.gene41037:CDS | 75.0% | |
| GAGGACGCGCGTGTTCCCGG+TGG | - | chr1.3:41756810-41756829 | MS.gene41037:CDS | 75.0% | |
| ! | CCGCAGCCGCCGCCACACGC+CGG | - | chr1.3:41756507-41756526 | MS.gene41037:CDS | 85.0% |
| ! | CCGGCGTGTGGCGGCGGCTG+CGG | + | chr1.3:41756510-41756529 | None:intergenic | 85.0% |
| ! | TGGCGGCGGCTGCGGCGCGT+CGG | + | chr1.3:41756502-41756521 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 41756402 | 41760263 | 41756402 | ID=MS.gene41037 |
| chr1.3 | mRNA | 41756402 | 41760263 | 41756402 | ID=MS.gene41037.t1;Parent=MS.gene41037 |
| chr1.3 | exon | 41760182 | 41760263 | 41760182 | ID=MS.gene41037.t1.exon1;Parent=MS.gene41037.t1 |
| chr1.3 | CDS | 41760182 | 41760263 | 41760182 | ID=cds.MS.gene41037.t1;Parent=MS.gene41037.t1 |
| chr1.3 | exon | 41759520 | 41760112 | 41759520 | ID=MS.gene41037.t1.exon2;Parent=MS.gene41037.t1 |
| chr1.3 | CDS | 41759520 | 41760112 | 41759520 | ID=cds.MS.gene41037.t1;Parent=MS.gene41037.t1 |
| chr1.3 | exon | 41757613 | 41757986 | 41757613 | ID=MS.gene41037.t1.exon3;Parent=MS.gene41037.t1 |
| chr1.3 | CDS | 41757613 | 41757986 | 41757613 | ID=cds.MS.gene41037.t1;Parent=MS.gene41037.t1 |
| chr1.3 | exon | 41757294 | 41757354 | 41757294 | ID=MS.gene41037.t1.exon4;Parent=MS.gene41037.t1 |
| chr1.3 | CDS | 41757294 | 41757354 | 41757294 | ID=cds.MS.gene41037.t1;Parent=MS.gene41037.t1 |
| chr1.3 | exon | 41756402 | 41757175 | 41756402 | ID=MS.gene41037.t1.exon5;Parent=MS.gene41037.t1 |
| chr1.3 | CDS | 41756402 | 41757175 | 41756402 | ID=cds.MS.gene41037.t1;Parent=MS.gene41037.t1 |
| Gene Sequence |
| Protein sequence |
