Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44404.t1 | XP_013470441.1 | 92 | 286 | 12 | 1 | 79 | 364 | 216 | 490 | 8.10E-113 | 417.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44404.t1 | Q7XTT4 | 28.7 | 181 | 114 | 4 | 85 | 251 | 451 | 630 | 4.3e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44404.t1 | A0A072VR57 | 92.0 | 286 | 12 | 1 | 79 | 364 | 216 | 490 | 5.8e-113 | 417.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene44404 | 0.827619 | 1.42E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene44404 | 0.866351 | 3.04E-65 | -1.69E-46 |
| MS.gene049255 | MS.gene44404 | 0.816919 | 4.31E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene44404 | 0.80013 | 1.66E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene44404 | 0.820498 | 6.64E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene44404 | 0.824954 | 6.10E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene44404 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene44404 | 0.845563 | 3.76E-59 | -1.69E-46 |
| MS.gene050759 | MS.gene44404 | 0.814058 | 1.87E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene44404 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene44404 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene44404 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene44404 | 0.811904 | 5.54E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene44404 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene44404 | 0.816067 | 6.69E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene44404 | 0.850334 | 1.82E-60 | -1.69E-46 |
| MS.gene05134 | MS.gene44404 | 0.814662 | 1.37E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene44404 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene44404 | 0.813159 | 2.95E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene44404 | 0.811716 | 6.09E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene44404 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene44404 | 0.812807 | 3.52E-51 | -1.69E-46 |
| MS.gene052459 | MS.gene44404 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene44404 | 0.826771 | 2.26E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene44404 | 0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene44404 | 0.842163 | 3.06E-58 | -1.69E-46 |
| MS.gene052896 | MS.gene44404 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene44404 | 0.84471 | 6.39E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene44404 | 0.82271 | 2.05E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene44404 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene44404 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene44404 | 0.81211 | 5.00E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene44404 | 0.846052 | 2.77E-59 | -1.69E-46 |
| MS.gene055222 | MS.gene44404 | 0.814528 | 1.47E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene44404 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene44404 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene44404 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene44404 | 0.803725 | 3.04E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene44404 | 0.814327 | 1.63E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene44404 | 0.8183 | 2.11E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene44404 | 0.83923 | 1.79E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene44404 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene44404 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene44404 | 0.815564 | 8.67E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene44404 | 0.829397 | 5.27E-55 | -1.69E-46 |
| MS.gene057855 | MS.gene44404 | 0.804445 | 2.15E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene44404 | 0.803545 | 3.31E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene44404 | 0.835789 | 1.37E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene44404 | 0.803062 | 4.17E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene44404 | 0.831543 | 1.57E-55 | -1.69E-46 |
| MS.gene058084 | MS.gene44404 | 0.81486 | 1.24E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene44404 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene44404 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene44404 | 0.842335 | 2.75E-58 | -1.69E-46 |
| MS.gene059283 | MS.gene44404 | 0.843296 | 1.53E-58 | -1.69E-46 |
| MS.gene05978 | MS.gene44404 | 0.811887 | 5.59E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene44404 | 0.808352 | 3.23E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene44404 | 0.893081 | 8.76E-75 | -1.69E-46 |
| MS.gene060296 | MS.gene44404 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene44404 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene44404 | 0.835896 | 1.28E-56 | -1.69E-46 |
| MS.gene060802 | MS.gene44404 | 0.807158 | 5.79E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene44404 | 0.865786 | 4.59E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44404.t1 | MTR_1g115375 | 93.151 | 365 | 11 | 3 | 1 | 364 | 139 | 490 | 0.0 | 637 |
| MS.gene44404.t1 | MTR_4g104470 | 28.161 | 174 | 113 | 6 | 84 | 249 | 123 | 292 | 2.43e-15 | 76.3 |
| MS.gene44404.t1 | MTR_1g045510 | 31.214 | 173 | 114 | 4 | 80 | 249 | 110 | 280 | 1.87e-14 | 73.2 |
| MS.gene44404.t1 | MTR_4g074930 | 25.248 | 202 | 131 | 6 | 68 | 253 | 350 | 547 | 2.74e-14 | 74.7 |
| MS.gene44404.t1 | MTR_4g074930 | 25.248 | 202 | 131 | 6 | 68 | 253 | 362 | 559 | 2.74e-14 | 74.7 |
| MS.gene44404.t1 | MTR_4g074930 | 25.248 | 202 | 131 | 6 | 68 | 253 | 315 | 512 | 2.89e-14 | 74.3 |
| MS.gene44404.t1 | MTR_4g074930 | 25.248 | 202 | 131 | 6 | 68 | 253 | 327 | 524 | 3.06e-14 | 74.3 |
| MS.gene44404.t1 | MTR_3g075500 | 29.213 | 178 | 109 | 6 | 84 | 249 | 110 | 282 | 5.34e-13 | 69.3 |
| MS.gene44404.t1 | MTR_2g022950 | 27.225 | 191 | 131 | 5 | 78 | 262 | 55 | 243 | 1.96e-12 | 67.4 |
| MS.gene44404.t1 | MTR_7g106440 | 25.137 | 183 | 124 | 5 | 80 | 249 | 106 | 288 | 2.89e-12 | 67.4 |
| MS.gene44404.t1 | MTR_1g056520 | 26.630 | 184 | 121 | 7 | 84 | 256 | 109 | 289 | 7.31e-12 | 65.9 |
| MS.gene44404.t1 | MTR_3g080130 | 39.744 | 78 | 45 | 2 | 175 | 250 | 36 | 113 | 3.43e-11 | 60.8 |
| MS.gene44404.t1 | MTR_3g095230 | 23.164 | 177 | 124 | 3 | 85 | 249 | 217 | 393 | 4.49e-11 | 64.7 |
| MS.gene44404.t1 | MTR_3g095230 | 23.164 | 177 | 124 | 3 | 85 | 249 | 217 | 393 | 4.90e-11 | 64.3 |
| MS.gene44404.t1 | MTR_2g022950 | 27.225 | 191 | 131 | 5 | 78 | 262 | 55 | 243 | 5.94e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44404.t1 | AT3G55340 | 43.003 | 293 | 126 | 7 | 72 | 354 | 150 | 411 | 5.70e-70 | 230 |
| MS.gene44404.t1 | AT3G18610 | 26.178 | 191 | 128 | 5 | 72 | 253 | 314 | 500 | 2.44e-14 | 74.7 |
| MS.gene44404.t1 | AT3G18610 | 26.178 | 191 | 128 | 5 | 72 | 253 | 344 | 530 | 2.50e-14 | 74.7 |
| MS.gene44404.t1 | AT3G18610 | 26.178 | 191 | 128 | 5 | 72 | 253 | 374 | 560 | 2.90e-14 | 74.7 |
| MS.gene44404.t1 | AT1G60000 | 29.651 | 172 | 117 | 4 | 81 | 249 | 83 | 253 | 7.32e-14 | 71.2 |
| MS.gene44404.t1 | AT4G24770 | 28.655 | 171 | 116 | 5 | 84 | 249 | 151 | 320 | 1.01e-13 | 71.6 |
| MS.gene44404.t1 | AT4G24770 | 28.655 | 171 | 116 | 5 | 84 | 249 | 151 | 320 | 1.01e-13 | 71.6 |
| MS.gene44404.t1 | AT5G50250 | 28.070 | 171 | 117 | 5 | 84 | 249 | 114 | 283 | 2.42e-13 | 70.1 |
| MS.gene44404.t1 | AT1G01080 | 27.647 | 170 | 110 | 4 | 84 | 240 | 109 | 278 | 2.34e-12 | 67.4 |
| MS.gene44404.t1 | AT1G01080 | 26.705 | 176 | 116 | 4 | 84 | 246 | 109 | 284 | 7.09e-12 | 65.9 |
| MS.gene44404.t1 | AT2G16940 | 26.064 | 188 | 125 | 5 | 85 | 259 | 184 | 370 | 1.31e-11 | 66.2 |
| MS.gene44404.t1 | AT2G16940 | 26.064 | 188 | 125 | 5 | 85 | 259 | 233 | 419 | 3.58e-11 | 65.1 |
| MS.gene44404.t1 | AT1G01080 | 26.554 | 177 | 116 | 5 | 84 | 246 | 109 | 285 | 3.98e-11 | 63.5 |
| MS.gene44404.t1 | AT2G16940 | 26.064 | 188 | 125 | 5 | 85 | 259 | 43 | 229 | 6.97e-11 | 63.5 |
| MS.gene44404.t1 | AT2G16940 | 26.064 | 188 | 125 | 5 | 85 | 259 | 43 | 229 | 6.97e-11 | 63.5 |
| MS.gene44404.t1 | AT2G37220 | 25.521 | 192 | 114 | 6 | 84 | 249 | 92 | 280 | 7.65e-11 | 62.8 |
| MS.gene44404.t1 | AT1G48920 | 24.713 | 174 | 112 | 7 | 85 | 241 | 299 | 470 | 9.33e-11 | 63.5 |
Find 80 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATATCCCTCCTTCATTTC+TGG | 0.108973 | 1.2:-85323693 | None:intergenic |
| ATCATTCTCCTCTGCAATTT+TGG | 0.128702 | 1.2:-85321683 | None:intergenic |
| CCTCACCTTAAAACTAATTA+TGG | 0.226944 | 1.2:-85323209 | None:intergenic |
| GAAGCAGCTATTTGTGGGTT+TGG | 0.284241 | 1.2:-85324251 | None:intergenic |
| TTCCTGACACTGGCAAGTTT+AGG | 0.286520 | 1.2:+85323179 | MS.gene44404:CDS |
| TCCTGACACTGGCAAGTTTA+GGG | 0.287968 | 1.2:+85323180 | MS.gene44404:CDS |
| AAGCAGCTATTTGTGGGTTT+GGG | 0.330204 | 1.2:-85324250 | None:intergenic |
| CCTTCATTTCTGGAGTAAAT+CGG | 0.343732 | 1.2:-85323683 | None:intergenic |
| TGCTACGGGTGTCGTCAAAA+AGG | 0.378482 | 1.2:+85324209 | MS.gene44404:CDS |
| GCAGGTTCCAAACCAGTTGC+AGG | 0.384369 | 1.2:+85323963 | MS.gene44404:CDS |
| TGTTCATGCAGTCAAGAAAA+TGG | 0.388079 | 1.2:+85323043 | MS.gene44404:intron |
| TTTAGAACCTGCAACTGGTT+TGG | 0.388692 | 1.2:-85323970 | None:intergenic |
| TTTCCACTTGCAACAGAACT+TGG | 0.391674 | 1.2:-85324170 | None:intergenic |
| AACAAAACTGCAGAGGAAAA+TGG | 0.393203 | 1.2:+85321655 | MS.gene44404:CDS |
| TAATGGGGTTGTTGTTGTTA+AGG | 0.395655 | 1.2:+85321564 | MS.gene44404:CDS |
| GTCATCCTCACTTGAATAGT+AGG | 0.395730 | 1.2:-85323101 | None:intergenic |
| ATCAAGAGCCAATGCTCGTT+TGG | 0.407420 | 1.2:-85323518 | None:intergenic |
| CCCCTAAACTTGCCAGTGTC+AGG | 0.419850 | 1.2:-85323181 | None:intergenic |
| ACTGGTTTGGAACCTGCAAC+TGG | 0.424778 | 1.2:-85323957 | None:intergenic |
| AAACGAGCATTGGCTCTTGA+TGG | 0.432294 | 1.2:+85323520 | MS.gene44404:CDS |
| TCTTGTTTGGAAGGCCTGTC+AGG | 0.436677 | 1.2:+85323904 | MS.gene44404:CDS |
| CTTCATTTCTGGAGTAAATC+GGG | 0.442986 | 1.2:-85323682 | None:intergenic |
| TTGGACCAAAGTGTCTTGTT+TGG | 0.444576 | 1.2:+85323891 | MS.gene44404:CDS |
| AATGATGATAGTGTTGCTAA+TGG | 0.456928 | 1.2:+85321547 | MS.gene44404:CDS |
| ATGATGATAGTGTTGCTAAT+GGG | 0.460576 | 1.2:+85321548 | MS.gene44404:CDS |
| CTTCTCAAATTGCAATGTAA+AGG | 0.461827 | 1.2:+85323773 | MS.gene44404:CDS |
| GTTGCTTGAGTTGCTTTACA+TGG | 0.466789 | 1.2:-85323660 | None:intergenic |
| CCTGGTTTAGAACCTGCAAC+TGG | 0.468577 | 1.2:-85323975 | None:intergenic |
| AATGCCACAATCTACGGTAT+TGG | 0.479144 | 1.2:+85321723 | MS.gene44404:CDS |
| CAGTAGAAGCAGCTATTTGT+GGG | 0.480573 | 1.2:-85324256 | None:intergenic |
| CTTGGTATGGACAAGGAAAC+GGG | 0.485470 | 1.2:+85323804 | MS.gene44404:CDS |
| GCAGTTGAGCAACCAGGTGC+AGG | 0.486239 | 1.2:+85324125 | MS.gene44404:CDS |
| ACTTGGTATGGACAAGGAAA+CGG | 0.498089 | 1.2:+85323803 | MS.gene44404:CDS |
| ACCAAAGTGTCTTGTTTGGA+AGG | 0.502106 | 1.2:+85323895 | MS.gene44404:CDS |
| AGCAGCGGCCAAACGAGCAT+TGG | 0.504558 | 1.2:+85323510 | MS.gene44404:CDS |
| GCTACGAAAGTTTATGTTGG+AGG | 0.506031 | 1.2:+85323073 | MS.gene44404:CDS |
| CCGATTTACTCCAGAAATGA+AGG | 0.517469 | 1.2:+85323683 | MS.gene44404:CDS |
| AGAGGAAATGCCACAATCTA+CGG | 0.521392 | 1.2:+85321717 | MS.gene44404:CDS |
| GCCTTCCAAACAAGACACTT+TGG | 0.522248 | 1.2:-85323896 | None:intergenic |
| CTTGTCCATACCAAGTCGTA+TGG | 0.528600 | 1.2:-85323796 | None:intergenic |
| AAAGGCCATACGACTTGGTA+TGG | 0.529863 | 1.2:+85323791 | MS.gene44404:CDS |
| GCAGTAGAAGCAGCTATTTG+TGG | 0.531101 | 1.2:-85324257 | None:intergenic |
| CATGCAATTAATTTCAGTGA+TGG | 0.534530 | 1.2:-85323152 | None:intergenic |
| GGATATAATAGAATATATGT+TGG | 0.535480 | 1.2:+85323708 | MS.gene44404:CDS |
| CCTGACACTGGCAAGTTTAG+GGG | 0.542201 | 1.2:+85323181 | MS.gene44404:CDS |
| GTTGCTACGAAAGTTTATGT+TGG | 0.543964 | 1.2:+85323070 | MS.gene44404:CDS |
| GAACTTGGTTGCTCAACAGT+TGG | 0.545048 | 1.2:-85324155 | None:intergenic |
| ACTGAAGACAGCACTTGCAT+TGG | 0.546883 | 1.2:+85323872 | MS.gene44404:CDS |
| GCAGGTTCTAAACCAGGTGC+AGG | 0.555413 | 1.2:+85323981 | MS.gene44404:CDS |
| CAACCAAGTTCTGTTGCAAG+TGG | 0.556840 | 1.2:+85324167 | MS.gene44404:CDS |
| ACCGCACAACTTATCCTGAC+AGG | 0.558651 | 1.2:-85323918 | None:intergenic |
| AACTGCAGAGGAAAATGGTA+AGG | 0.561255 | 1.2:+85321660 | MS.gene44404:CDS |
| TCATCCTCACTTGAATAGTA+GGG | 0.561329 | 1.2:-85323100 | None:intergenic |
| TCATTTGCAGTTGAGCAACC+AGG | 0.564422 | 1.2:+85324119 | MS.gene44404:CDS |
| AATGTAAAGGCCATACGACT+TGG | 0.565382 | 1.2:+85323786 | MS.gene44404:CDS |
| CTGACACTGGCAAGTTTAGG+GGG | 0.568128 | 1.2:+85323182 | MS.gene44404:CDS |
| TATATGTTGGAAGTCTGTCA+TGG | 0.574488 | 1.2:+85323721 | MS.gene44404:CDS |
| AAATAACAGAGGAAGAACTA+AGG | 0.575629 | 1.2:+85323745 | MS.gene44404:CDS |
| AAGGAAACGGGAGAATTTCG+AGG | 0.577973 | 1.2:+85323816 | MS.gene44404:CDS |
| CCAGTTGCAGGTTCTAAACC+AGG | 0.578088 | 1.2:+85323975 | MS.gene44404:CDS |
| AGGAAGAATAGAATGTGCTA+CGG | 0.579726 | 1.2:+85324194 | MS.gene44404:CDS |
| GTTCTGTTGCAAGTGGAAAG+AGG | 0.588009 | 1.2:+85324174 | MS.gene44404:CDS |
| AAAGAAGAACAAAACTGCAG+AGG | 0.588575 | 1.2:+85321648 | MS.gene44404:CDS |
| CTAACACTACTACCACTACA+AGG | 0.592037 | 1.2:+85321746 | MS.gene44404:CDS |
| TGATGATAGTGTTGCTAATG+GGG | 0.592050 | 1.2:+85321549 | MS.gene44404:CDS |
| ATATGTTGGAAGTCTGTCAT+GGG | 0.601270 | 1.2:+85323722 | MS.gene44404:CDS |
| GGAAGAATAGAATGTGCTAC+GGG | 0.605374 | 1.2:+85324195 | MS.gene44404:CDS |
| GTTGAGCAACCAGGTGCAGG+AGG | 0.622181 | 1.2:+85324128 | MS.gene44404:CDS |
| ATAGATAAATCACCTTGTAG+TGG | 0.629770 | 1.2:-85321758 | None:intergenic |
| GAATGATTCTAATCATCAAG+AGG | 0.630329 | 1.2:+85321699 | MS.gene44404:CDS |
| TTAGCCAATACCGTAGATTG+TGG | 0.631628 | 1.2:-85321727 | None:intergenic |
| CATACGACTTGGTATGGACA+AGG | 0.655913 | 1.2:+85323797 | MS.gene44404:CDS |
| TTTACTCCAGAAATGAAGGA+GGG | 0.658643 | 1.2:+85323687 | MS.gene44404:CDS |
| GCCTGTCAGGATAAGTTGTG+CGG | 0.659328 | 1.2:+85323917 | MS.gene44404:CDS |
| ATTTACTCCAGAAATGAAGG+AGG | 0.660456 | 1.2:+85323686 | MS.gene44404:CDS |
| TGGTAAGGCCAAAATTGCAG+AGG | 0.668394 | 1.2:+85321675 | MS.gene44404:CDS |
| AGGAAACGGGAGAATTTCGA+GGG | 0.671275 | 1.2:+85323817 | MS.gene44404:CDS |
| AATTCCCTACTATTCAAGTG+AGG | 0.689712 | 1.2:+85323096 | MS.gene44404:CDS |
| TCTGTCATGGGAAATAACAG+AGG | 0.691463 | 1.2:+85323734 | MS.gene44404:CDS |
| CTTCCTGCAGACTGAAGCAG+CGG | 0.704303 | 1.2:+85323495 | MS.gene44404:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATCAATTAAAAAACT+GGG | - | chr1.2:85323014-85323033 | None:intergenic | 15.0% |
| !! | ATCAATATTAAGTATATGTT+TGG | - | chr1.2:85322072-85322091 | None:intergenic | 15.0% |
| !! | TAAAACATTTAATGTTAACA+GGG | + | chr1.2:85323614-85323633 | MS.gene44404:intron | 15.0% |
| !!! | ATTGATTTTGAATGAATTTA+TGG | + | chr1.2:85321910-85321929 | MS.gene44404:intron | 15.0% |
| !!! | ATTTTTATTTAATGTGTGTT+TGG | + | chr1.2:85321871-85321890 | MS.gene44404:intron | 15.0% |
| !!! | TTTTTTTTTCTTACTTATGA+AGG | + | chr1.2:85321788-85321807 | MS.gene44404:intron | 15.0% |
| !! | AAAACATTTAATGTTAACAG+GGG | + | chr1.2:85323615-85323634 | MS.gene44404:intron | 20.0% |
| !! | AACAATAATAACAACAATCA+AGG | - | chr1.2:85322960-85322979 | None:intergenic | 20.0% |
| !! | AATTACTCTTTCAAAAAATG+TGG | + | chr1.2:85322687-85322706 | MS.gene44404:intron | 20.0% |
| !! | ACAATAATAACAACAATCAA+GGG | - | chr1.2:85322959-85322978 | None:intergenic | 20.0% |
| !! | CAATAATAGAATGATAAATG+AGG | + | chr1.2:85322171-85322190 | MS.gene44404:intron | 20.0% |
| !! | CAGATAATCAATTAAAAAAC+TGG | - | chr1.2:85323015-85323034 | None:intergenic | 20.0% |
| !! | GGATATAATAGAATATATGT+TGG | + | chr1.2:85323708-85323727 | MS.gene44404:CDS | 20.0% |
| !! | GTAAAACATTTAATGTTAAC+AGG | + | chr1.2:85323613-85323632 | MS.gene44404:intron | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | + | chr1.2:85322910-85322929 | MS.gene44404:intron | 20.0% |
| !! | TGCAAAAAAATCAATGAAAA+AGG | + | chr1.2:85321588-85321607 | MS.gene44404:CDS | 20.0% |
| !!! | AATCAATGATACTTTAAAAG+TGG | + | chr1.2:85322044-85322063 | MS.gene44404:intron | 20.0% |
| !!! | CATTTTTAGCTTTATTTTGT+TGG | + | chr1.2:85323243-85323262 | MS.gene44404:intron | 20.0% |
| !!! | GTTTCAATTAAAGTTTTTCT+AGG | - | chr1.2:85322845-85322864 | None:intergenic | 20.0% |
| !!! | TTAATATTGATTTTGTGTGA+AGG | + | chr1.2:85322081-85322100 | MS.gene44404:intron | 20.0% |
| ! | AAATGTCTCAAACAATGTAA+TGG | + | chr1.2:85321844-85321863 | MS.gene44404:intron | 25.0% |
| ! | ATGAAAATATTGTAGAGAGT+TGG | + | chr1.2:85322245-85322264 | MS.gene44404:intron | 25.0% |
| ! | CATGTAGATTCTATATAGTA+AGG | + | chr1.2:85322336-85322355 | MS.gene44404:intron | 25.0% |
| ! | CTATACTAGCAATACATTAT+AGG | + | chr1.2:85323347-85323366 | MS.gene44404:intron | 25.0% |
| ! | GAAAATAATATATGAACCGA+TGG | - | chr1.2:85323380-85323399 | None:intergenic | 25.0% |
| ! | TATATGATAGAACATTATGG+CGG | + | chr1.2:85322913-85322932 | MS.gene44404:intron | 25.0% |
| ! | TGAAAATATTGTAGAGAGTT+GGG | + | chr1.2:85322246-85322265 | MS.gene44404:intron | 25.0% |
| ! | TGACTAAAATTCAATTGTAG+AGG | + | chr1.2:85321974-85321993 | MS.gene44404:intron | 25.0% |
| !! | CCAAAAATCGATTCTTATTA+TGG | + | chr1.2:85323436-85323455 | MS.gene44404:intron | 25.0% |
| !!! | AATCGATTTTTGGAATTGTA+AGG | - | chr1.2:85323429-85323448 | None:intergenic | 25.0% |
| !!! | CATAATTAGTTTTAAGGTGA+GGG | + | chr1.2:85323210-85323229 | MS.gene44404:intron | 25.0% |
| !!! | CCATAATAAGAATCGATTTT+TGG | - | chr1.2:85323439-85323458 | None:intergenic | 25.0% |
| !!! | GATTGCCATAATTAGTTTTA+AGG | + | chr1.2:85323204-85323223 | MS.gene44404:CDS | 25.0% |
| AAATAACAGAGGAAGAACTA+AGG | + | chr1.2:85323745-85323764 | MS.gene44404:CDS | 30.0% | |
| AAGAAATAGATGACATTGAG+AGG | + | chr1.2:85322424-85322443 | MS.gene44404:intron | 30.0% | |
| AGAAAAGATGGTAAGAAACT+CGG | + | chr1.2:85322283-85322302 | MS.gene44404:intron | 30.0% | |
| AGAAATAGATGACATTGAGA+GGG | + | chr1.2:85322425-85322444 | MS.gene44404:intron | 30.0% | |
| ATAGATAAATCACCTTGTAG+TGG | - | chr1.2:85321761-85321780 | None:intergenic | 30.0% | |
| CATGCAATTAATTTCAGTGA+TGG | - | chr1.2:85323155-85323174 | None:intergenic | 30.0% | |
| CATTATAGGTCTATTTCCAT+CGG | + | chr1.2:85323361-85323380 | MS.gene44404:intron | 30.0% | |
| CCTCACCTTAAAACTAATTA+TGG | - | chr1.2:85323212-85323231 | None:intergenic | 30.0% | |
| CTTCTCAAATTGCAATGTAA+AGG | + | chr1.2:85323773-85323792 | MS.gene44404:CDS | 30.0% | |
| GAAAATATTGTAGAGAGTTG+GGG | + | chr1.2:85322247-85322266 | MS.gene44404:intron | 30.0% | |
| GAACTCAAAAATTGTATTGG+AGG | + | chr1.2:85322555-85322574 | MS.gene44404:intron | 30.0% | |
| GAATGATTCTAATCATCAAG+AGG | + | chr1.2:85321699-85321718 | MS.gene44404:CDS | 30.0% | |
| TAATAACAACAATCAAGGGT+CGG | - | chr1.2:85322955-85322974 | None:intergenic | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | + | chr1.2:85322559-85322578 | MS.gene44404:intron | 30.0% | |
| ! | AACTGCAAATGATTTTTCAC+CGG | - | chr1.2:85324111-85324130 | None:intergenic | 30.0% |
| ! | AATGATGATAGTGTTGCTAA+TGG | + | chr1.2:85321547-85321566 | MS.gene44404:CDS | 30.0% |
| ! | AATTTAAAACCCTCCTCATT+TGG | + | chr1.2:85322530-85322549 | MS.gene44404:intron | 30.0% |
| ! | ATGATGATAGTGTTGCTAAT+GGG | + | chr1.2:85321548-85321567 | MS.gene44404:CDS | 30.0% |
| ! | ATTTAAAACCCTCCTCATTT+GGG | + | chr1.2:85322531-85322550 | MS.gene44404:intron | 30.0% |
| ! | CTTACCATCTTTTCTACAAT+AGG | - | chr1.2:85322278-85322297 | None:intergenic | 30.0% |
| ! | TCTTTTTGTGCTTCCTTATA+TGG | + | chr1.2:85323297-85323316 | MS.gene44404:intron | 30.0% |
| !!! | CCATAATTAGTTTTAAGGTG+AGG | + | chr1.2:85323209-85323228 | MS.gene44404:intron | 30.0% |
| !!! | GACATTCACAGTTATTTTGA+AGG | + | chr1.2:85323121-85323140 | MS.gene44404:CDS | 30.0% |
| AAAGAAGAACAAAACTGCAG+AGG | + | chr1.2:85321648-85321667 | MS.gene44404:CDS | 35.0% | |
| AACAAAACTGCAGAGGAAAA+TGG | + | chr1.2:85321655-85321674 | MS.gene44404:CDS | 35.0% | |
| AATTCAAAACCCTCCTCATT+TGG | + | chr1.2:85322477-85322496 | MS.gene44404:intron | 35.0% | |
| AATTCCCTACTATTCAAGTG+AGG | + | chr1.2:85323096-85323115 | MS.gene44404:CDS | 35.0% | |
| ACATTTAATGTTAACAGGGG+AGG | + | chr1.2:85323618-85323637 | MS.gene44404:intron | 35.0% | |
| AGAGATTAATGAGCTGGATA+GGG | + | chr1.2:85322884-85322903 | MS.gene44404:intron | 35.0% | |
| AGCACCTATTGTAGAAAAGA+TGG | + | chr1.2:85322271-85322290 | MS.gene44404:intron | 35.0% | |
| AGGAAGAATAGAATGTGCTA+CGG | + | chr1.2:85324194-85324213 | MS.gene44404:CDS | 35.0% | |
| AGGGGTTTGTAAAAAAAGGA+AGG | + | chr1.2:85322392-85322411 | MS.gene44404:intron | 35.0% | |
| ATATGTTGGAAGTCTGTCAT+GGG | + | chr1.2:85323722-85323741 | MS.gene44404:CDS | 35.0% | |
| ATTCAAAACCCTCCTCATTT+GGG | + | chr1.2:85322478-85322497 | MS.gene44404:intron | 35.0% | |
| ATTGATTGCAATGTTTCAGC+AGG | + | chr1.2:85323324-85323343 | MS.gene44404:intron | 35.0% | |
| ATTTACTCCAGAAATGAAGG+AGG | + | chr1.2:85323686-85323705 | MS.gene44404:CDS | 35.0% | |
| CAAGTTTGAATCAATTCTGG+AGG | + | chr1.2:85322018-85322037 | MS.gene44404:intron | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | + | chr1.2:85322558-85322577 | MS.gene44404:intron | 35.0% | |
| GAAATAGATGACATTGAGAG+GGG | + | chr1.2:85322426-85322445 | MS.gene44404:intron | 35.0% | |
| GCAATCAATCCTACCATATA+AGG | - | chr1.2:85323313-85323332 | None:intergenic | 35.0% | |
| GGGGAACTCAAAAATTGTAT+TGG | + | chr1.2:85322552-85322571 | MS.gene44404:intron | 35.0% | |
| GTCTCAAACAATGTAATGGT+TGG | + | chr1.2:85321848-85321867 | MS.gene44404:intron | 35.0% | |
| GTTGCTACGAAAGTTTATGT+TGG | + | chr1.2:85323070-85323089 | MS.gene44404:CDS | 35.0% | |
| TAGAGATTAATGAGCTGGAT+AGG | + | chr1.2:85322883-85322902 | MS.gene44404:intron | 35.0% | |
| TATATGTTGGAAGTCTGTCA+TGG | + | chr1.2:85323721-85323740 | MS.gene44404:CDS | 35.0% | |
| TCATCCTCACTTGAATAGTA+GGG | - | chr1.2:85323103-85323122 | None:intergenic | 35.0% | |
| TCATCTGATTTACTTCCCTT+AGG | - | chr1.2:85322791-85322810 | None:intergenic | 35.0% | |
| TGTTCATGCAGTCAAGAAAA+TGG | + | chr1.2:85323043-85323062 | MS.gene44404:intron | 35.0% | |
| TTATATCCCTCCTTCATTTC+TGG | - | chr1.2:85323696-85323715 | None:intergenic | 35.0% | |
| TTGAACAAAAAACCAGTTGC+AGG | + | chr1.2:85323945-85323964 | MS.gene44404:CDS | 35.0% | |
| TTTACTCCAGAAATGAAGGA+GGG | + | chr1.2:85323687-85323706 | MS.gene44404:CDS | 35.0% | |
| TTTGTGCTTCCTTATATGGT+AGG | + | chr1.2:85323301-85323320 | MS.gene44404:intron | 35.0% | |
| ! | ATCATTCTCCTCTGCAATTT+TGG | - | chr1.2:85321686-85321705 | None:intergenic | 35.0% |
| ! | TAATGGGGTTGTTGTTGTTA+AGG | + | chr1.2:85321564-85321583 | MS.gene44404:CDS | 35.0% |
| ! | TGATGATAGTGTTGCTAATG+GGG | + | chr1.2:85321549-85321568 | MS.gene44404:CDS | 35.0% |
| ! | TTTAAAACCCTCCTCATTTG+GGG | + | chr1.2:85322532-85322551 | MS.gene44404:intron | 35.0% |
| !! | CCTTCATTTCTGGAGTAAAT+CGG | - | chr1.2:85323686-85323705 | None:intergenic | 35.0% |
| !! | CTTCATTTCTGGAGTAAATC+GGG | - | chr1.2:85323685-85323704 | None:intergenic | 35.0% |
| !! | TTAATGTGTGTTTGGTGCTA+TGG | + | chr1.2:85321879-85321898 | MS.gene44404:intron | 35.0% |
| !!! | GCAACTGGTTTTTTGTTCAA+AGG | - | chr1.2:85323945-85323964 | None:intergenic | 35.0% |
| AAACTCCCAAACAAAGCCTA+AGG | + | chr1.2:85322772-85322791 | MS.gene44404:intron | 40.0% | |
| AACTCCCAAACAAAGCCTAA+GGG | + | chr1.2:85322773-85322792 | MS.gene44404:intron | 40.0% | |
| AACTGCAGAGGAAAATGGTA+AGG | + | chr1.2:85321660-85321679 | MS.gene44404:CDS | 40.0% | |
| AAGCAGCTATTTGTGGGTTT+GGG | - | chr1.2:85324253-85324272 | None:intergenic | 40.0% | |
| AATGCCACAATCTACGGTAT+TGG | + | chr1.2:85321723-85321742 | MS.gene44404:CDS | 40.0% | |
| AATGTAAAGGCCATACGACT+TGG | + | chr1.2:85323786-85323805 | MS.gene44404:CDS | 40.0% | |
| ACTTGGTATGGACAAGGAAA+CGG | + | chr1.2:85323803-85323822 | MS.gene44404:CDS | 40.0% | |
| AGAGGAAATGCCACAATCTA+CGG | + | chr1.2:85321717-85321736 | MS.gene44404:CDS | 40.0% | |
| CAGTAGAAGCAGCTATTTGT+GGG | - | chr1.2:85324259-85324278 | None:intergenic | 40.0% | |
| CCGATTTACTCCAGAAATGA+AGG | + | chr1.2:85323683-85323702 | MS.gene44404:CDS | 40.0% | |
| CTAACACTACTACCACTACA+AGG | + | chr1.2:85321746-85321765 | MS.gene44404:CDS | 40.0% | |
| GAGACTAGAGATTAATGAGC+TGG | + | chr1.2:85322878-85322897 | MS.gene44404:intron | 40.0% | |
| GCGCAAGTTTGAATCAATTC+TGG | + | chr1.2:85322015-85322034 | MS.gene44404:intron | 40.0% | |
| GCTACGAAAGTTTATGTTGG+AGG | + | chr1.2:85323073-85323092 | MS.gene44404:CDS | 40.0% | |
| GGAAGAATAGAATGTGCTAC+GGG | + | chr1.2:85324195-85324214 | MS.gene44404:CDS | 40.0% | |
| GTCATCCTCACTTGAATAGT+AGG | - | chr1.2:85323104-85323123 | None:intergenic | 40.0% | |
| TCAGTTGCAGTTGAAAAACC+AGG | + | chr1.2:85324011-85324030 | MS.gene44404:CDS | 40.0% | |
| TCAGTTGCTGGTGAAAAATC+AGG | + | chr1.2:85324083-85324102 | MS.gene44404:CDS | 40.0% | |
| TCTGTCATGGGAAATAACAG+AGG | + | chr1.2:85323734-85323753 | MS.gene44404:CDS | 40.0% | |
| TGATAAATGAGGATGTGCGT+TGG | + | chr1.2:85322182-85322201 | MS.gene44404:intron | 40.0% | |
| TTAAAACCCTCCTCATTTGG+GGG | + | chr1.2:85322533-85322552 | MS.gene44404:intron | 40.0% | |
| TTAGCCAATACCGTAGATTG+TGG | - | chr1.2:85321730-85321749 | None:intergenic | 40.0% | |
| TTCAAAACCCTCCTCATTTG+GGG | + | chr1.2:85322479-85322498 | MS.gene44404:intron | 40.0% | |
| TTTCCACTTGCAACAGAACT+TGG | - | chr1.2:85324173-85324192 | None:intergenic | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr1.2:85322565-85322584 | MS.gene44404:intron | 40.0% |
| ! | GTTGCTTGAGTTGCTTTACA+TGG | - | chr1.2:85323663-85323682 | None:intergenic | 40.0% |
| ! | TTGGACCAAAGTGTCTTGTT+TGG | + | chr1.2:85323891-85323910 | MS.gene44404:CDS | 40.0% |
| ! | TTTAGAACCTGCAACTGGTT+TGG | - | chr1.2:85323973-85323992 | None:intergenic | 40.0% |
| !! | ACCAAAGTGTCTTGTTTGGA+AGG | + | chr1.2:85323895-85323914 | MS.gene44404:CDS | 40.0% |
| !! | ACTTCCCTTAGGCTTTGTTT+GGG | - | chr1.2:85322780-85322799 | None:intergenic | 40.0% |
| !! | ATTGATTTTTCACCTGCACC+TGG | - | chr1.2:85324032-85324051 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr1.2:85322354-85322373 | MS.gene44404:intron | 40.0% |
| !! | TACTTCCCTTAGGCTTTGTT+TGG | - | chr1.2:85322781-85322800 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr1.2:85322773-85322792 | None:intergenic | 40.0% |
| !!! | CACAGTTATTTTGAAGGCTG+TGG | + | chr1.2:85323127-85323146 | MS.gene44404:CDS | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | chr1.2:85322546-85322565 | None:intergenic | 40.0% |
| AAGGAAACGGGAGAATTTCG+AGG | + | chr1.2:85323816-85323835 | MS.gene44404:CDS | 45.0% | |
| ACTGAAGACAGCACTTGCAT+TGG | + | chr1.2:85323872-85323891 | MS.gene44404:CDS | 45.0% | |
| AGGAAACGGGAGAATTTCGA+GGG | + | chr1.2:85323817-85323836 | MS.gene44404:CDS | 45.0% | |
| ATCAAGAGCCAATGCTCGTT+TGG | - | chr1.2:85323521-85323540 | None:intergenic | 45.0% | |
| CAACCAAGTTCTGTTGCAAG+TGG | + | chr1.2:85324167-85324186 | MS.gene44404:CDS | 45.0% | |
| CTTGGTATGGACAAGGAAAC+GGG | + | chr1.2:85323804-85323823 | MS.gene44404:CDS | 45.0% | |
| CTTGTCCATACCAAGTCGTA+TGG | - | chr1.2:85323799-85323818 | None:intergenic | 45.0% | |
| GAACTTGGTTGCTCAACAGT+TGG | - | chr1.2:85324158-85324177 | None:intergenic | 45.0% | |
| GAAGCAGCTATTTGTGGGTT+TGG | - | chr1.2:85324254-85324273 | None:intergenic | 45.0% | |
| GAGAGTAGTCAAACCACTAG+AGG | + | chr1.2:85322809-85322828 | MS.gene44404:intron | 45.0% | |
| GATGGTAAGAAACTCGGCTT+AGG | + | chr1.2:85322289-85322308 | MS.gene44404:intron | 45.0% | |
| GCAGCTGAAAAATCAGTTGC+TGG | + | chr1.2:85324071-85324090 | MS.gene44404:CDS | 45.0% | |
| GCAGTAGAAGCAGCTATTTG+TGG | - | chr1.2:85324260-85324279 | None:intergenic | 45.0% | |
| GCCTTCCAAACAAGACACTT+TGG | - | chr1.2:85323899-85323918 | None:intergenic | 45.0% | |
| GGGGAGGGGTTTGTAAAAAA+AGG | + | chr1.2:85322388-85322407 | MS.gene44404:intron | 45.0% | |
| GTTCTGTTGCAAGTGGAAAG+AGG | + | chr1.2:85324174-85324193 | MS.gene44404:CDS | 45.0% | |
| TAGATGACATTGAGAGGGGA+AGG | + | chr1.2:85322430-85322449 | MS.gene44404:intron | 45.0% | |
| TCAAAACCCTCCTCATTTGG+GGG | + | chr1.2:85322480-85322499 | MS.gene44404:intron | 45.0% | |
| TCATTTGCAGTTGAGCAACC+AGG | + | chr1.2:85324119-85324138 | MS.gene44404:CDS | 45.0% | |
| TCCTGACACTGGCAAGTTTA+GGG | + | chr1.2:85323180-85323199 | MS.gene44404:CDS | 45.0% | |
| TCTGGAGGGTTGGGAATATA+GGG | - | chr1.2:85322730-85322749 | None:intergenic | 45.0% | |
| TGGTAAGGCCAAAATTGCAG+AGG | + | chr1.2:85321675-85321694 | MS.gene44404:CDS | 45.0% | |
| TTCCTGACACTGGCAAGTTT+AGG | + | chr1.2:85323179-85323198 | MS.gene44404:CDS | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr1.2:85322359-85322378 | MS.gene44404:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr1.2:85322768-85322787 | None:intergenic | 45.0% |
| ! | TGCATGACTTTTCCTGACAC+TGG | + | chr1.2:85323169-85323188 | MS.gene44404:CDS | 45.0% |
| !! | AAACGAGCATTGGCTCTTGA+TGG | + | chr1.2:85323520-85323539 | MS.gene44404:CDS | 45.0% |
| !! | AAAGGCCATACGACTTGGTA+TGG | + | chr1.2:85323791-85323810 | MS.gene44404:CDS | 45.0% |
| !! | ACAACTTGCTGACGTTTCTG+TGG | + | chr1.2:85323468-85323487 | MS.gene44404:intron | 45.0% |
| !! | ACTGATTTTTCACCTGCACC+TGG | - | chr1.2:85323996-85324015 | None:intergenic | 45.0% |
| !! | ACTGATTTTTCAGCTGCAGC+TGG | - | chr1.2:85324068-85324087 | None:intergenic | 45.0% |
| !! | CATACGACTTGGTATGGACA+AGG | + | chr1.2:85323797-85323816 | MS.gene44404:CDS | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr1.2:85322358-85322377 | MS.gene44404:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr1.2:85322769-85322788 | None:intergenic | 45.0% |
| !!! | TATTGGAGGAGGGTTTTGGA+GGG | + | chr1.2:85322569-85322588 | MS.gene44404:intron | 45.0% |
| AAAACCCTCCTCATTTGGGG+GGG | + | chr1.2:85322482-85322501 | MS.gene44404:intron | 50.0% | |
| ACAATCAAGGGTCGGCTACA+TGG | - | chr1.2:85322947-85322966 | None:intergenic | 50.0% | |
| ACATTGAGAGGGGAAGGCTT+TGG | + | chr1.2:85322436-85322455 | MS.gene44404:intron | 50.0% | |
| ACCGCACAACTTATCCTGAC+AGG | - | chr1.2:85323921-85323940 | None:intergenic | 50.0% | |
| AGTCAAACCACTAGAGGCAG+AGG | + | chr1.2:85322815-85322834 | MS.gene44404:intron | 50.0% | |
| ATTGAGAGGGGAAGGCTTTG+GGG | + | chr1.2:85322438-85322457 | MS.gene44404:intron | 50.0% | |
| CAAAACCCTCCTCATTTGGG+GGG | + | chr1.2:85322481-85322500 | MS.gene44404:intron | 50.0% | |
| CATTGAGAGGGGAAGGCTTT+GGG | + | chr1.2:85322437-85322456 | MS.gene44404:intron | 50.0% | |
| CCTGACACTGGCAAGTTTAG+GGG | + | chr1.2:85323181-85323200 | MS.gene44404:CDS | 50.0% | |
| CTGACACTGGCAAGTTTAGG+GGG | + | chr1.2:85323182-85323201 | MS.gene44404:CDS | 50.0% | |
| CTGGAGGGTTGGGAATATAG+GGG | - | chr1.2:85322729-85322748 | None:intergenic | 50.0% | |
| GAAACTCGGCTTAGGTGGTT+TGG | + | chr1.2:85322297-85322316 | MS.gene44404:intron | 50.0% | |
| GCAGTTGAAAAACCAGGTGC+AGG | + | chr1.2:85324017-85324036 | MS.gene44404:CDS | 50.0% | |
| GCCTGTCAGGATAAGTTGTG+CGG | + | chr1.2:85323917-85323936 | MS.gene44404:CDS | 50.0% | |
| GCTGGTGAAAAATCAGGTGC+CGG | + | chr1.2:85324089-85324108 | MS.gene44404:CDS | 50.0% | |
| GGTAAGAAACTCGGCTTAGG+TGG | + | chr1.2:85322292-85322311 | MS.gene44404:intron | 50.0% | |
| TGAGTTCCCCCAAATGAGGA+GGG | - | chr1.2:85322542-85322561 | None:intergenic | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+AGG | - | chr1.2:85322543-85322562 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr1.2:85322364-85322383 | MS.gene44404:intron | 50.0% | |
| ! | CCTGGTTTAGAACCTGCAAC+TGG | - | chr1.2:85323978-85323997 | None:intergenic | 50.0% |
| ! | CTCTGGAGGGTTGGGAATAT+AGG | - | chr1.2:85322731-85322750 | None:intergenic | 50.0% |
| ! | TCTTGTTTGGAAGGCCTGTC+AGG | + | chr1.2:85323904-85323923 | MS.gene44404:CDS | 50.0% |
| ! | TGCTACGGGTGTCGTCAAAA+AGG | + | chr1.2:85324209-85324228 | MS.gene44404:CDS | 50.0% |
| !! | ACTGGTTTGGAACCTGCAAC+TGG | - | chr1.2:85323960-85323979 | None:intergenic | 50.0% |
| !! | CCAGTTGCAGGTTCTAAACC+AGG | + | chr1.2:85323975-85323994 | MS.gene44404:CDS | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr1.2:85322357-85322376 | MS.gene44404:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr1.2:85322770-85322789 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+AGG | + | chr1.2:85322568-85322587 | MS.gene44404:intron | 50.0% |
| AAACCCTCCTCATTTGGGGG+GGG | + | chr1.2:85322483-85322502 | MS.gene44404:intron | 55.0% | |
| AGGTCTTCCTCTGCCTCTAG+TGG | - | chr1.2:85322825-85322844 | None:intergenic | 55.0% | |
| CCCCTAAACTTGCCAGTGTC+AGG | - | chr1.2:85323184-85323203 | None:intergenic | 55.0% | |
| CTTCCTGCAGACTGAAGCAG+CGG | + | chr1.2:85323495-85323514 | MS.gene44404:intron | 55.0% | |
| GAGGATGTGCGTTGGATGTG+TGG | + | chr1.2:85322190-85322209 | MS.gene44404:intron | 55.0% | |
| GCAGGTTCCAAACCAGTTGC+AGG | + | chr1.2:85323963-85323982 | MS.gene44404:CDS | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr1.2:85322363-85322382 | MS.gene44404:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr1.2:85322764-85322783 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr1.2:85322765-85322784 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr1.2:85322763-85322782 | None:intergenic | 55.0% | |
| !! | GCAGGTTCTAAACCAGGTGC+AGG | + | chr1.2:85323981-85324000 | MS.gene44404:CDS | 55.0% |
| !!! | GTTGGTTTTCCTCCTGCACC+TGG | - | chr1.2:85324140-85324159 | None:intergenic | 55.0% |
| AAAGCCCCCCCCAAATGAGG+AGG | - | chr1.2:85322490-85322509 | None:intergenic | 60.0% | |
| AAGCCCCCCCCAAATGAGGA+GGG | - | chr1.2:85322489-85322508 | None:intergenic | 60.0% | |
| AGCAGCGGCCAAACGAGCAT+TGG | + | chr1.2:85323510-85323529 | MS.gene44404:CDS | 60.0% | |
| CCTCATTTGGGGGGGGCTTT+GGG | + | chr1.2:85322490-85322509 | MS.gene44404:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr1.2:85322368-85322387 | MS.gene44404:intron | 60.0% | |
| CTCATTTGGGGGGGGCTTTG+GGG | + | chr1.2:85322491-85322510 | MS.gene44404:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr1.2:85322369-85322388 | MS.gene44404:intron | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr1.2:85322758-85322777 | None:intergenic | 60.0% | |
| GCAGTTGAGCAACCAGGTGC+AGG | + | chr1.2:85324125-85324144 | MS.gene44404:CDS | 60.0% | |
| GTTGAGCAACCAGGTGCAGG+AGG | + | chr1.2:85324128-85324147 | MS.gene44404:CDS | 60.0% | |
| TCCTCATTTGGGGGGGGCTT+TGG | + | chr1.2:85322489-85322508 | MS.gene44404:intron | 60.0% | |
| !! | AAGGGAAGGCTCTGGAGGGT+TGG | - | chr1.2:85322740-85322759 | None:intergenic | 60.0% |
| !! | AGGGAAGGCTCTGGAGGGTT+GGG | - | chr1.2:85322739-85322758 | None:intergenic | 60.0% |
| CCCAAAGCCCCCCCCAAATG+AGG | - | chr1.2:85322493-85322512 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr1.2:85322367-85322386 | MS.gene44404:intron | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+AGG | - | chr1.2:85322759-85322778 | None:intergenic | 65.0% | |
| TGGCCGCTGCTTCAGTCTGC+AGG | - | chr1.2:85323501-85323520 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | + | chr1.2:85322373-85322392 | MS.gene44404:intron | 65.0% | |
| TTGGAGGGGAGGGGAAGGGA+AGG | - | chr1.2:85322754-85322773 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | + | chr1.2:85322372-85322391 | MS.gene44404:intron | 65.0% | |
| ! | AGGGGAAGGGAAGGCTCTGG+AGG | - | chr1.2:85322745-85322764 | None:intergenic | 65.0% |
| !! | GGGGAAGGGAAGGCTCTGGA+GGG | - | chr1.2:85322744-85322763 | None:intergenic | 65.0% |
| GGGAGGGGAAGGGAAGGCTC+TGG | - | chr1.2:85322748-85322767 | None:intergenic | 70.0% | |
| TGGAGGGGAAGGGAGGGGAG+GGG | + | chr1.2:85322374-85322393 | MS.gene44404:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85321544 | 85324286 | 85321544 | ID=MS.gene44404 |
| chr1.2 | mRNA | 85321544 | 85324286 | 85321544 | ID=MS.gene44404.t1;Parent=MS.gene44404 |
| chr1.2 | exon | 85321544 | 85321767 | 85321544 | ID=MS.gene44404.t1.exon1;Parent=MS.gene44404.t1 |
| chr1.2 | CDS | 85321544 | 85321767 | 85321544 | ID=cds.MS.gene44404.t1;Parent=MS.gene44404.t1 |
| chr1.2 | exon | 85323054 | 85323225 | 85323054 | ID=MS.gene44404.t1.exon2;Parent=MS.gene44404.t1 |
| chr1.2 | CDS | 85323054 | 85323225 | 85323054 | ID=cds.MS.gene44404.t1;Parent=MS.gene44404.t1 |
| chr1.2 | exon | 85323505 | 85323551 | 85323505 | ID=MS.gene44404.t1.exon3;Parent=MS.gene44404.t1 |
| chr1.2 | CDS | 85323505 | 85323551 | 85323505 | ID=cds.MS.gene44404.t1;Parent=MS.gene44404.t1 |
| chr1.2 | exon | 85323635 | 85324286 | 85323635 | ID=MS.gene44404.t1.exon4;Parent=MS.gene44404.t1 |
| chr1.2 | CDS | 85323635 | 85324286 | 85323635 | ID=cds.MS.gene44404.t1;Parent=MS.gene44404.t1 |
| Gene Sequence |
| Protein sequence |
