Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44909.t1 | RYQ81366.1 | 53.5 | 635 | 224 | 6 | 79 | 653 | 61 | 684 | 3.20E-192 | 681.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44909.t1 | O03376 | 80.7 | 326 | 60 | 2 | 331 | 653 | 1 | 326 | 2.2e-149 | 530.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44909.t1 | A0A3Q7HT64 | 57.6 | 597 | 209 | 7 | 79 | 653 | 68 | 642 | 1.6e-193 | 685.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04920 | MS.gene44909 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene44909 | 0.897358 | 1.52E-76 | -1.69E-46 |
| MS.gene049499 | MS.gene44909 | 0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene44909 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene44909 | 0.819969 | 8.79E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene44909 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene44909 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene051154 | MS.gene44909 | 0.832601 | 8.61E-56 | -1.69E-46 |
| MS.gene051597 | MS.gene44909 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene44909 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene44909 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene051959 | MS.gene44909 | 0.820444 | 6.84E-53 | -1.69E-46 |
| MS.gene051960 | MS.gene44909 | 0.817091 | 3.95E-52 | -1.69E-46 |
| MS.gene052040 | MS.gene44909 | 0.826429 | 2.73E-54 | -1.69E-46 |
| MS.gene052053 | MS.gene44909 | 0.837361 | 5.44E-57 | -1.69E-46 |
| MS.gene052118 | MS.gene44909 | 0.818363 | 2.04E-52 | -1.69E-46 |
| MS.gene052500 | MS.gene44909 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene052502 | MS.gene44909 | 0.802742 | 4.85E-49 | -1.69E-46 |
| MS.gene052826 | MS.gene44909 | 0.808103 | 3.65E-50 | -1.69E-46 |
| MS.gene053866 | MS.gene44909 | 0.819425 | 1.17E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene44909 | 0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene44909 | 0.845652 | 3.55E-59 | -1.69E-46 |
| MS.gene054222 | MS.gene44909 | 0.815621 | 8.42E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene44909 | 0.88917 | 3.08E-73 | -1.69E-46 |
| MS.gene054893 | MS.gene44909 | 0.894103 | 3.38E-75 | -1.69E-46 |
| MS.gene054957 | MS.gene44909 | 0.878724 | 2.23E-69 | -1.69E-46 |
| MS.gene054960 | MS.gene44909 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene055147 | MS.gene44909 | 0.852579 | 4.21E-61 | -1.69E-46 |
| MS.gene055148 | MS.gene44909 | 0.846119 | 2.65E-59 | -1.69E-46 |
| MS.gene055149 | MS.gene44909 | 0.827765 | 1.31E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene44909 | 0.876925 | 9.48E-69 | -1.69E-46 |
| MS.gene055151 | MS.gene44909 | 0.817718 | 2.85E-52 | -1.69E-46 |
| MS.gene055155 | MS.gene44909 | 0.834801 | 2.43E-56 | -1.69E-46 |
| MS.gene055226 | MS.gene44909 | 0.826182 | 3.12E-54 | -1.69E-46 |
| MS.gene056071 | MS.gene44909 | 0.805116 | 1.56E-49 | -1.69E-46 |
| MS.gene056100 | MS.gene44909 | 0.845414 | 4.12E-59 | -1.69E-46 |
| MS.gene05624 | MS.gene44909 | 0.839328 | 1.69E-57 | -1.69E-46 |
| MS.gene056530 | MS.gene44909 | 0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene44909 | 0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene44909 | 0.825801 | 3.84E-54 | -1.69E-46 |
| MS.gene057472 | MS.gene44909 | 0.801076 | 1.07E-48 | -1.69E-46 |
| MS.gene057622 | MS.gene44909 | 0.879974 | 8.03E-70 | -1.69E-46 |
| MS.gene058095 | MS.gene44909 | 0.850748 | 1.39E-60 | -1.69E-46 |
| MS.gene058159 | MS.gene44909 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene058592 | MS.gene44909 | 0.83516 | 1.97E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene44909 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene05878 | MS.gene44909 | 0.865766 | 4.65E-65 | -1.69E-46 |
| MS.gene059436 | MS.gene44909 | 0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene44909 | 0.889612 | 2.07E-73 | -1.69E-46 |
| MS.gene05956 | MS.gene44909 | 0.865188 | 7.08E-65 | -1.69E-46 |
| MS.gene059686 | MS.gene44909 | 0.81543 | 9.28E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene44909 | -0.826716 | 2.33E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene44909 | -0.813413 | 2.59E-51 | -1.69E-46 |
| MS.gene06023 | MS.gene44909 | 0.835562 | 1.56E-56 | -1.69E-46 |
| MS.gene060412 | MS.gene44909 | 0.814331 | 1.63E-51 | -1.69E-46 |
| MS.gene060413 | MS.gene44909 | 0.818089 | 2.35E-52 | -1.69E-46 |
| MS.gene060426 | MS.gene44909 | 0.818857 | 1.57E-52 | -1.69E-46 |
| MS.gene060518 | MS.gene44909 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene44909 | 0.829251 | 5.72E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene44909 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene060964 | MS.gene44909 | 0.802065 | 6.70E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44909.t1 | MTR_5g070680 | 95.975 | 323 | 13 | 0 | 331 | 653 | 1 | 323 | 0.0 | 649 |
| MS.gene44909.t1 | MTR_5g070680 | 89.877 | 326 | 27 | 2 | 1 | 326 | 1 | 320 | 0.0 | 607 |
| MS.gene44909.t1 | MTR_5g070870 | 93.865 | 326 | 15 | 1 | 1 | 326 | 1 | 321 | 0.0 | 613 |
| MS.gene44909.t1 | MTR_5g070870 | 88.889 | 324 | 35 | 1 | 331 | 653 | 1 | 324 | 0.0 | 583 |
| MS.gene44909.t1 | MTR_4g094222 | 69.206 | 315 | 86 | 3 | 22 | 326 | 29 | 342 | 3.91e-158 | 459 |
| MS.gene44909.t1 | MTR_4g094222 | 67.391 | 322 | 90 | 1 | 347 | 653 | 24 | 345 | 5.19e-158 | 458 |
| MS.gene44909.t1 | MTR_5g026620 | 64.260 | 277 | 99 | 0 | 377 | 653 | 54 | 330 | 1.77e-133 | 395 |
| MS.gene44909.t1 | MTR_5g026620 | 63.441 | 279 | 99 | 1 | 51 | 326 | 49 | 327 | 9.18e-133 | 393 |
| MS.gene44909.t1 | MTR_5g026620 | 70.796 | 226 | 66 | 0 | 428 | 653 | 37 | 262 | 6.38e-119 | 355 |
| MS.gene44909.t1 | MTR_5g026620 | 70.852 | 223 | 65 | 0 | 104 | 326 | 37 | 259 | 1.96e-117 | 351 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44909.t1 | AT5G64210 | 69.611 | 283 | 81 | 3 | 376 | 653 | 71 | 353 | 2.57e-144 | 424 |
| MS.gene44909.t1 | AT5G64210 | 67.944 | 287 | 84 | 4 | 44 | 326 | 68 | 350 | 1.83e-141 | 416 |
| MS.gene44909.t1 | AT3G22370 | 66.421 | 271 | 91 | 0 | 56 | 326 | 81 | 351 | 2.29e-137 | 406 |
| MS.gene44909.t1 | AT3G22370 | 63.509 | 285 | 96 | 1 | 377 | 653 | 70 | 354 | 2.95e-136 | 403 |
| MS.gene44909.t1 | AT3G22360 | 64.364 | 275 | 98 | 0 | 52 | 326 | 48 | 322 | 2.56e-134 | 397 |
| MS.gene44909.t1 | AT3G22360 | 64.444 | 270 | 96 | 0 | 384 | 653 | 56 | 325 | 7.10e-133 | 393 |
| MS.gene44909.t1 | AT1G32350 | 61.000 | 300 | 106 | 2 | 365 | 653 | 19 | 318 | 5.76e-132 | 390 |
| MS.gene44909.t1 | AT1G32350 | 60.269 | 297 | 112 | 1 | 36 | 326 | 19 | 315 | 5.61e-129 | 383 |
| MS.gene44909.t1 | AT3G27620 | 65.517 | 261 | 90 | 0 | 393 | 653 | 69 | 329 | 1.15e-130 | 388 |
| MS.gene44909.t1 | AT3G27620 | 65.891 | 258 | 88 | 0 | 69 | 326 | 69 | 326 | 2.26e-130 | 387 |
| MS.gene44909.t1 | AT1G32350 | 59.786 | 281 | 107 | 1 | 36 | 310 | 19 | 299 | 2.13e-120 | 361 |
| MS.gene44909.t1 | AT1G32350 | 60.142 | 281 | 101 | 2 | 365 | 634 | 19 | 299 | 2.23e-120 | 360 |
Find 143 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTATTGCAATTGATTAT+TGG | 0.137756 | 5.2:-59571408 | MS.gene44909:CDS |
| CTGCTATTGCTATTGATTAT+TGG | 0.140551 | 5.2:-59568104 | MS.gene44909:CDS |
| CTTTCAATTCCTTTCCTTGA+TGG | 0.150163 | 5.2:+59570603 | None:intergenic |
| ACATAGGTTTGTTGGTTATT+TGG | 0.199576 | 5.2:-59568202 | MS.gene44909:CDS |
| TCAGATCTGTCAAGTTTCTA+AGG | 0.220365 | 5.2:-59569054 | MS.gene44909:CDS |
| GCATAGATTTGTTGGTTATT+TGG | 0.238440 | 5.2:-59571506 | MS.gene44909:CDS |
| ACGCCGTTGTTTCGAGTTAC+TGG | 0.248772 | 5.2:-59572931 | MS.gene44909:CDS |
| TCACTAGGCCCAAGGTTAAA+AGG | 0.260435 | 5.2:-59569551 | MS.gene44909:CDS |
| CAAGAGCGCCACCGCCATTC+TGG | 0.273793 | 5.2:+59569685 | None:intergenic |
| GTCAACTCTGCCGGAGAAAA+AGG | 0.280296 | 5.2:-59573008 | MS.gene44909:CDS |
| GTCAACTCTGCCAGAGAAAA+AGG | 0.288648 | 5.2:-59569640 | MS.gene44909:CDS |
| ACACCGTCGTTTCGAGTTAC+TGG | 0.299309 | 5.2:-59569578 | MS.gene44909:CDS |
| AAAATAGCGCATAGATTTGT+TGG | 0.333021 | 5.2:-59571514 | MS.gene44909:CDS |
| AGCATCCCTCCCACCATTCC+AGG | 0.354203 | 5.2:+59571736 | None:intergenic |
| CAGAATGGCGGTGGCGCTCT+TGG | 0.366629 | 5.2:-59569684 | MS.gene44909:CDS |
| TAATTACGGCAGGAACGATA+TGG | 0.370525 | 5.2:-59571796 | MS.gene44909:intron |
| CAGTAGGCCTAAGGTTCTTA+AGG | 0.396717 | 5.2:-59572903 | MS.gene44909:CDS |
| AAGTTGGCATGAAAGGCTTT+TGG | 0.400981 | 5.2:-59568292 | MS.gene44909:CDS |
| CGCCGTTGTTTCGAGTTACT+GGG | 0.409023 | 5.2:-59572930 | MS.gene44909:CDS |
| GCTCTCTGATTTATACTTCA+AGG | 0.411153 | 5.2:-59572129 | MS.gene44909:intron |
| TCAGATCTGTCAAGTTTCTA+CGG | 0.416301 | 5.2:-59572154 | MS.gene44909:CDS |
| TCCTAAGGATGCAACTCTTA+AGG | 0.422607 | 5.2:-59568076 | MS.gene44909:CDS |
| CGAGCTTTGTTCCGCAGTGG+TGG | 0.429833 | 5.2:-59573127 | MS.gene44909:CDS |
| GTGCTGATGAGGCTCATCAT+AGG | 0.433399 | 5.2:-59568035 | MS.gene44909:CDS |
| GTGCTGATGAGGCTCATCAT+AGG | 0.433399 | 5.2:-59571339 | MS.gene44909:CDS |
| AAAAGCCTCTCATGCCAACT+TGG | 0.437573 | 5.2:+59571598 | None:intergenic |
| CAGTATGGCGGTGACACATA+TGG | 0.439684 | 5.2:-59573052 | MS.gene44909:CDS |
| GCTGTTATTACCGTTGTTGT+TGG | 0.441662 | 5.2:+59572955 | None:intergenic |
| TGTTGGTTATTTGGAGGAAG+AGG | 0.444234 | 5.2:-59568193 | MS.gene44909:CDS |
| TCTTTAAGAGTTGCATCCTT+AGG | 0.446114 | 5.2:+59571379 | None:intergenic |
| TGCAATTGAAAGTGGTAAAG+TGG | 0.449348 | 5.2:-59571446 | MS.gene44909:CDS |
| AAAACAGCACATAGGTTTGT+TGG | 0.451661 | 5.2:-59568210 | MS.gene44909:CDS |
| AAAAGCCTTTCATGCCAACT+TGG | 0.452120 | 5.2:+59568294 | None:intergenic |
| CACCGTCGTTTCGAGTTACT+GGG | 0.458130 | 5.2:-59569577 | MS.gene44909:CDS |
| CAGATCTGTCAAGTTTCTAC+GGG | 0.458497 | 5.2:-59572153 | MS.gene44909:CDS |
| GAAACAATAGCAGCTGTCCC+TGG | 0.459329 | 5.2:-59571754 | MS.gene44909:CDS |
| GCGCTCTTGGAAGCTTCTAC+TGG | 0.467431 | 5.2:-59569671 | MS.gene44909:CDS |
| AAGTTGGCATGAGAGGCTTT+TGG | 0.469081 | 5.2:-59571596 | MS.gene44909:CDS |
| TGAAACCAAGTTGGCATGAA+AGG | 0.472407 | 5.2:-59568299 | MS.gene44909:CDS |
| CAGCCGAGACACCACCAGTA+TGG | 0.472974 | 5.2:-59573067 | MS.gene44909:CDS |
| CCCTCCCACCATTGGCGGGA+CGG | 0.475915 | 5.2:+59568437 | None:intergenic |
| CACTAGGCCCAAGGTTAAAA+GGG | 0.475986 | 5.2:-59569550 | MS.gene44909:CDS |
| TCCTTAAGAGTTGCATCCTT+AGG | 0.476176 | 5.2:+59568075 | None:intergenic |
| CCGCCATACTGGTGGTGTCT+CGG | 0.482288 | 5.2:+59573064 | None:intergenic |
| CAGATCTGTCAAGTTTCTAA+GGG | 0.482561 | 5.2:-59569053 | MS.gene44909:CDS |
| TTGTAGGATATTCACCATCA+AGG | 0.489202 | 5.2:-59567520 | MS.gene44909:intron |
| TTGTAGGATATTCACCATCA+AGG | 0.489202 | 5.2:-59570617 | MS.gene44909:intron |
| TGCAGCCGTCCCGCCAATGG+TGG | 0.492667 | 5.2:-59568442 | MS.gene44909:CDS |
| CAATGATAACCAACAGGAGC+TGG | 0.493882 | 5.2:+59567478 | None:intergenic |
| CAATGATAACCAACAGGAGC+TGG | 0.493882 | 5.2:+59570575 | None:intergenic |
| TGATTATTGGAGACTTCCTA+AGG | 0.494224 | 5.2:-59568091 | MS.gene44909:CDS |
| AGCATCCCTCCCACCATTGG+CGG | 0.496321 | 5.2:+59568432 | None:intergenic |
| CCATCCTCCTTAAGAACCTT+AGG | 0.498410 | 5.2:+59572896 | None:intergenic |
| CACTGTTATTCGTGCTGATG+AGG | 0.498752 | 5.2:-59568046 | MS.gene44909:CDS |
| CATTTAGATGCAATTGAAAG+TGG | 0.503861 | 5.2:-59571454 | MS.gene44909:CDS |
| CAATAATCAATTGCAATAGC+AGG | 0.503907 | 5.2:+59571409 | None:intergenic |
| GTGGCCATGGAACTGCTTCA+TGG | 0.504226 | 5.2:-59572867 | MS.gene44909:intron |
| AATTTCAACACGCTGGTGGT+TGG | 0.504805 | 5.2:-59571690 | MS.gene44909:CDS |
| TAGATTTGTTGGTTATTTGG+AGG | 0.505625 | 5.2:-59571503 | MS.gene44909:CDS |
| ATGACTCAATGATAACCAAC+AGG | 0.508368 | 5.2:+59567472 | None:intergenic |
| AAAAGCATCCCTCCCACCAT+TGG | 0.511584 | 5.2:+59568429 | None:intergenic |
| CGAGTTACTGGGGTATCAGT+AGG | 0.516108 | 5.2:-59572919 | MS.gene44909:CDS |
| GCATCCCTCCCACCATTGGC+GGG | 0.516429 | 5.2:+59568433 | None:intergenic |
| TTGAAGAAGCAGAGAATGAA+AGG | 0.517469 | 5.2:-59568350 | MS.gene44909:CDS |
| CATATGTGTCACCGCCATAC+TGG | 0.518407 | 5.2:+59573053 | None:intergenic |
| AGGATGGAACTGAGTGGCCA+TGG | 0.518415 | 5.2:-59569527 | MS.gene44909:CDS |
| AGGATGGAACTGAGTGGCCA+TGG | 0.518415 | 5.2:-59572880 | MS.gene44909:CDS |
| TGCTGATGAGGCTCATCATA+GGG | 0.523825 | 5.2:-59568034 | MS.gene44909:CDS |
| TGCTGATGAGGCTCATCATA+GGG | 0.523825 | 5.2:-59571338 | MS.gene44909:CDS |
| TGAAACCAAGTTGGCATGAG+AGG | 0.527939 | 5.2:-59571603 | MS.gene44909:CDS |
| ATTTGTTGGTTATTTGGAGG+AGG | 0.527982 | 5.2:-59571500 | MS.gene44909:CDS |
| TGATTATTGGAGACTTCCTA+AGG | 0.530834 | 5.2:-59571395 | MS.gene44909:CDS |
| GCAGAGGATGTCAACTCTGC+CGG | 0.531002 | 5.2:-59573017 | MS.gene44909:CDS |
| CCTAAGGTTCTTAAGGAGGA+TGG | 0.531919 | 5.2:-59572896 | MS.gene44909:CDS |
| CGGATGTCATGCAATGATGC+TGG | 0.534003 | 5.2:-59568472 | MS.gene44909:CDS |
| TAGGTTTGTTGGTTATTTGG+AGG | 0.534495 | 5.2:-59568199 | MS.gene44909:CDS |
| GCCGTCCCGCCAATGGTGGG+AGG | 0.536564 | 5.2:-59568438 | MS.gene44909:CDS |
| AGCAGCTGTCCCTGGAATGG+TGG | 0.537892 | 5.2:-59571746 | MS.gene44909:CDS |
| GTGGCCATGGAACTGTTTCA+TGG | 0.541418 | 5.2:-59569514 | MS.gene44909:intron |
| CTGTCCCTGGAATGGTGGGA+GGG | 0.543809 | 5.2:-59571741 | MS.gene44909:CDS |
| CTGGGGTATCAGTAGGCCTA+AGG | 0.544437 | 5.2:-59572912 | MS.gene44909:CDS |
| AATTGCAGCCGTCCCGCCAA+TGG | 0.545797 | 5.2:-59568445 | MS.gene44909:CDS |
| AATTTCAACACACTGGTGGT+TGG | 0.547562 | 5.2:-59568386 | MS.gene44909:CDS |
| CACTGTTATCCGTGCTGATG+AGG | 0.548694 | 5.2:-59571350 | MS.gene44909:CDS |
| CCACCGCCATTCTGGTGTCT+CGG | 0.549588 | 5.2:+59569693 | None:intergenic |
| CAATAATCAATAGCAATAGC+AGG | 0.550641 | 5.2:+59568105 | None:intergenic |
| CCCAAGGTTAAAAGGGAGGA+TGG | 0.553186 | 5.2:-59569543 | MS.gene44909:CDS |
| ACACATATGGAAACTTCTAC+TGG | 0.554906 | 5.2:-59573039 | MS.gene44909:CDS |
| TCAATAGCAATAGCAGGAGC+AGG | 0.557374 | 5.2:+59568111 | None:intergenic |
| TCAATTGCAATAGCAGGAGC+AGG | 0.557374 | 5.2:+59571415 | None:intergenic |
| AAAGAGGCTCCAGCTCCTGT+TGG | 0.560458 | 5.2:-59570584 | MS.gene44909:intron |
| AGAAAATTTCAACACGCTGG+TGG | 0.561109 | 5.2:-59571694 | MS.gene44909:CDS |
| TTGAAGAAGCAGAGAATGAG+AGG | 0.562560 | 5.2:-59571654 | MS.gene44909:CDS |
| GAGCTTTGTTCCGCAGTGGT+GGG | 0.563025 | 5.2:-59573126 | MS.gene44909:CDS |
| TCAAGGAAAAGAACTGAAAG+AGG | 0.563153 | 5.2:-59567503 | MS.gene44909:CDS |
| CCGTCCCGCCAATGGTGGGA+GGG | 0.566316 | 5.2:-59568437 | MS.gene44909:CDS |
| CCGAGACACCAGAATGGCGG+TGG | 0.566922 | 5.2:-59569693 | MS.gene44909:CDS |
| AGAAAATTTCAACACACTGG+TGG | 0.567089 | 5.2:-59568390 | MS.gene44909:CDS |
| CTTACCATGAAGCAGTTCCA+TGG | 0.568629 | 5.2:+59572863 | None:intergenic |
| AATAGCAGCTGTCCCTGGAA+TGG | 0.571632 | 5.2:-59571749 | MS.gene44909:CDS |
| TTAAGAAAATTTCAACACAC+TGG | 0.571844 | 5.2:-59568393 | MS.gene44909:CDS |
| ATGGAAACTTCTACTGGCAG+AGG | 0.575458 | 5.2:-59573033 | MS.gene44909:CDS |
| GCAGCCGTCCCGCCAATGGT+GGG | 0.576177 | 5.2:-59568441 | MS.gene44909:CDS |
| CATTTAAATGCAATTGAAAG+CGG | 0.576631 | 5.2:-59568150 | MS.gene44909:CDS |
| TTGTTTCTAGCATCATTGCA+TGG | 0.582988 | 5.2:+59571770 | None:intergenic |
| CCGCCGTTGAGAAGCTGCGG+TGG | 0.585171 | 5.2:+59573098 | None:intergenic |
| TCAAGGAAAGGAATTGAAAG+AGG | 0.585266 | 5.2:-59570600 | MS.gene44909:CDS |
| AAAGAGGCTCCAGCTCCTGT+TGG | 0.585296 | 5.2:-59567487 | MS.gene44909:CDS |
| GCTGTCCCTGGAATGGTGGG+AGG | 0.588333 | 5.2:-59571742 | MS.gene44909:CDS |
| GCAGCTGTCCCTGGAATGGT+GGG | 0.590768 | 5.2:-59571745 | MS.gene44909:CDS |
| GGATATTCACCATCAAGGAA+AGG | 0.604645 | 5.2:-59570612 | MS.gene44909:CDS |
| CTTACCATGAAACAGTTCCA+TGG | 0.606074 | 5.2:+59569510 | None:intergenic |
| CTAAGAAAATTTCAACACGC+TGG | 0.618947 | 5.2:-59571697 | MS.gene44909:CDS |
| GCATCCCTCCCACCATTCCA+GGG | 0.622243 | 5.2:+59571737 | None:intergenic |
| AAACTTGTTACTAAGGTCAA+CGG | 0.622396 | 5.2:-59569781 | MS.gene44909:CDS |
| TCTGAGCTGTAACTTTCCCA+TGG | 0.628662 | 5.2:+59569136 | None:intergenic |
| GCCGTTGTTTCGAGTTACTG+GGG | 0.628977 | 5.2:-59572929 | MS.gene44909:CDS |
| TATGATGAGCCTCATCAGCA+CGG | 0.637725 | 5.2:+59571341 | None:intergenic |
| TCTGAACTGTAACTTTCCCA+TGG | 0.639567 | 5.2:+59572236 | None:intergenic |
| GGATGTCAATCACTTTGCGT+CGG | 0.643344 | 5.2:-59568013 | MS.gene44909:intron |
| GCACGAGCTTTGTTCCGCAG+TGG | 0.647126 | 5.2:-59573130 | MS.gene44909:CDS |
| GAGGATGCATTTGATGACAA+TGG | 0.651653 | 5.2:-59571635 | MS.gene44909:CDS |
| GTTCAGCCGAGACACCAGAA+TGG | 0.652102 | 5.2:-59569699 | MS.gene44909:CDS |
| CTACCACCGCAGCTTCTCAA+CGG | 0.654616 | 5.2:-59573101 | MS.gene44909:CDS |
| TCACCGCCGTTGAGAAGCTG+CGG | 0.655407 | 5.2:+59573095 | None:intergenic |
| CCGTCGTTTCGAGTTACTGG+GGG | 0.659766 | 5.2:-59569575 | MS.gene44909:CDS |
| TAGGCCTAAGGTTCTTAAGG+AGG | 0.663923 | 5.2:-59572900 | MS.gene44909:CDS |
| TAACTGCTGCAGGAACGGTA+CGG | 0.667013 | 5.2:-59568492 | MS.gene44909:intron |
| AAGGATGCATTTGATGACAA+TGG | 0.671655 | 5.2:-59568331 | MS.gene44909:CDS |
| CAGCCGAGACACCAGAATGG+CGG | 0.671975 | 5.2:-59569696 | MS.gene44909:CDS |
| ACCGTCGTTTCGAGTTACTG+GGG | 0.673804 | 5.2:-59569576 | MS.gene44909:CDS |
| AAGAATGATGCCAACAACAA+CGG | 0.673813 | 5.2:-59572965 | MS.gene44909:CDS |
| CCGAGACACCACCAGTATGG+CGG | 0.675055 | 5.2:-59573064 | MS.gene44909:CDS |
| TAGGCCCAAGGTTAAAAGGG+AGG | 0.675638 | 5.2:-59569547 | MS.gene44909:CDS |
| TTGAACTTGTGAAACCAAGT+TGG | 0.675740 | 5.2:-59568308 | MS.gene44909:CDS |
| TTGAACTTGTGAAACCAAGT+TGG | 0.675740 | 5.2:-59571612 | MS.gene44909:CDS |
| ATGTGTCACCGCCATACTGG+TGG | 0.688488 | 5.2:+59573056 | None:intergenic |
| ACCCCAGTAACTCGAAACAA+CGG | 0.693976 | 5.2:+59572928 | None:intergenic |
| CCACCGCAGCTTCTCAACGG+CGG | 0.706966 | 5.2:-59573098 | MS.gene44909:CDS |
| AAAGGGAGGATGGAACTGAG+TGG | 0.744791 | 5.2:-59569533 | MS.gene44909:CDS |
| TTAAGGAGGATGGAACTGAG+TGG | 0.746044 | 5.2:-59572886 | MS.gene44909:CDS |
| GGTGGTAGTTCCCACCACTG+CGG | 0.755021 | 5.2:+59573116 | None:intergenic |
| AGTAGCCAGAGCTATCACCG+CGG | 0.858501 | 5.2:-59569741 | MS.gene44909:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATATACTATATAT+AGG | - | chr5.2:59571143-59571162 | MS.gene44909:intron | 10.0% |
| !! | TAATCATATATAAAATAACA+AGG | + | chr5.2:59570770-59570789 | None:intergenic | 10.0% |
| !!! | AATGTTAAGATTTATATTTT+AGG | - | chr5.2:59569485-59569504 | MS.gene44909:intron | 10.0% |
| !!! | TTCAAATTTTATATTTATAG+AGG | + | chr5.2:59569391-59569410 | None:intergenic | 10.0% |
| !!! | TTTTAAAGAATCTTATAATT+AGG | - | chr5.2:59570522-59570541 | MS.gene44909:intron | 10.0% |
| !! | AAAACAAAAGTCTATTTATA+AGG | - | chr5.2:59572967-59572986 | MS.gene44909:CDS | 15.0% |
| !! | AAATTTGAATTAATTGTGAT+AGG | - | chr5.2:59569402-59569421 | MS.gene44909:intron | 15.0% |
| !! | ACACAATTATAATGAAAATT+TGG | + | chr5.2:59569349-59569368 | None:intergenic | 15.0% |
| !! | ACTAAGATGATATATTTATA+GGG | + | chr5.2:59572715-59572734 | None:intergenic | 15.0% |
| !! | ATAAAAAACTTTATTCTTAG+TGG | - | chr5.2:59571846-59571865 | MS.gene44909:intron | 15.0% |
| !! | ATGAAACATAAAAATTACTT+AGG | - | chr5.2:59568586-59568605 | MS.gene44909:intron | 15.0% |
| !! | ATTTAACGAATAATTAAACA+TGG | - | chr5.2:59570631-59570650 | MS.gene44909:intron | 15.0% |
| !! | GTTTATAATGAATTATTAAG+CGG | + | chr5.2:59571216-59571235 | None:intergenic | 15.0% |
| !! | TAGTAAAATCAATATTAGTT+TGG | - | chr5.2:59570327-59570346 | MS.gene44909:intron | 15.0% |
| !! | TGAAACATAAAAATTACTTA+GGG | - | chr5.2:59568587-59568606 | MS.gene44909:intron | 15.0% |
| !! | TTCATTATAATTGTGTTAAA+AGG | - | chr5.2:59569353-59569372 | MS.gene44909:intron | 15.0% |
| !!! | AACATTTTCTCAAAAAAAAA+TGG | - | chr5.2:59572996-59573015 | MS.gene44909:CDS | 15.0% |
| !!! | ATAATTTTCATATAGAGTAA+TGG | + | chr5.2:59571670-59571689 | None:intergenic | 15.0% |
| !!! | CTCAAATCAAATTTTTTTAA+TGG | + | chr5.2:59568220-59568239 | None:intergenic | 15.0% |
| !!! | TAACACATTAAATTGTTTTT+TGG | + | chr5.2:59568698-59568717 | None:intergenic | 15.0% |
| !!! | TATTTCATCTTTATTTTTGA+AGG | + | chr5.2:59569665-59569684 | None:intergenic | 15.0% |
| !!! | TCAATTTAAAGTTAATTCTA+GGG | - | chr5.2:59568292-59568311 | MS.gene44909:CDS | 15.0% |
| !!! | TTCAAATTTAGTTTCTTTAA+GGG | + | chr5.2:59569890-59569909 | None:intergenic | 15.0% |
| !!! | TTTCAAATTTAGTTTCTTTA+AGG | + | chr5.2:59569891-59569910 | None:intergenic | 15.0% |
| !!! | TTTTATTTATTGAACAATTC+AGG | + | chr5.2:59570173-59570192 | None:intergenic | 15.0% |
| !! | AAAGAATTTATGAAAAAAGC+CGG | + | chr5.2:59567980-59567999 | None:intergenic | 20.0% |
| !! | AAGAATACATATATAGAAAG+AGG | - | chr5.2:59567791-59567810 | MS.gene44909:intron | 20.0% |
| !! | AAGAATCTTATAATTAGGAA+TGG | - | chr5.2:59570527-59570546 | MS.gene44909:intron | 20.0% |
| !! | AGTGTCTAAAAAACTATAAT+GGG | + | chr5.2:59569944-59569963 | None:intergenic | 20.0% |
| !! | GAATATATACTATATATAGG+AGG | - | chr5.2:59571146-59571165 | MS.gene44909:intron | 20.0% |
| !! | GACTAAGATGATATATTTAT+AGG | + | chr5.2:59572716-59572735 | None:intergenic | 20.0% |
| !! | TATCATATGAAAGTAATCAA+TGG | + | chr5.2:59568113-59568132 | None:intergenic | 20.0% |
| !! | TATTGTCCTTTGTTAAAAAT+TGG | - | chr5.2:59571804-59571823 | MS.gene44909:intron | 20.0% |
| !!! | AAAAAATTTGATTTGAGAGT+TGG | - | chr5.2:59568223-59568242 | MS.gene44909:CDS | 20.0% |
| !!! | ATAGAAGAATTTTGATTGAT+GGG | - | chr5.2:59572101-59572120 | MS.gene44909:intron | 20.0% |
| !!! | ATTTTTATTTCAAGGTTTGT+GGG | - | chr5.2:59571613-59571632 | MS.gene44909:CDS | 20.0% |
| !!! | ATTTTTGAAGGATTTTTTGT+GGG | + | chr5.2:59569653-59569672 | None:intergenic | 20.0% |
| !!! | CTCAATTTAAAGTTAATTCT+AGG | - | chr5.2:59568291-59568310 | MS.gene44909:CDS | 20.0% |
| !!! | GTAAGTCTATCTAAAATTTT+AGG | + | chr5.2:59571286-59571305 | None:intergenic | 20.0% |
| !!! | TATCAGAAATGTCTTAATTT+TGG | - | chr5.2:59570377-59570396 | MS.gene44909:intron | 20.0% |
| !!! | TATTTTTGAAGGATTTTTTG+TGG | + | chr5.2:59569654-59569673 | None:intergenic | 20.0% |
| ! | AATCATTTCATTTGTGATGT+TGG | - | chr5.2:59569443-59569462 | MS.gene44909:intron | 25.0% |
| ! | AATGGATCGTCTTATATTTA+AGG | - | chr5.2:59570488-59570507 | MS.gene44909:intron | 25.0% |
| ! | AGAAGAAAATCCAAAAAAAG+TGG | - | chr5.2:59570558-59570577 | MS.gene44909:intron | 25.0% |
| ! | ATCATGTACCAAAAACATTT+GGG | - | chr5.2:59568444-59568463 | MS.gene44909:CDS | 25.0% |
| ! | ATTAGTACTTACTACAAAGT+TGG | + | chr5.2:59570602-59570621 | None:intergenic | 25.0% |
| ! | ATTTATACTTCAAGGTATGT+GGG | - | chr5.2:59568513-59568532 | MS.gene44909:intron | 25.0% |
| ! | ATTTGAATTATAATTACGGC+AGG | - | chr5.2:59568828-59568847 | MS.gene44909:intron | 25.0% |
| ! | CATTTAAATGCAATTGAAAG+CGG | - | chr5.2:59572484-59572503 | MS.gene44909:intron | 25.0% |
| ! | GAGTGTCTAAAAAACTATAA+TGG | + | chr5.2:59569945-59569964 | None:intergenic | 25.0% |
| ! | GTTAAATCTTCAACGAAATT+TGG | - | chr5.2:59569518-59569537 | MS.gene44909:CDS | 25.0% |
| ! | TACAACACATTGAATTACTA+GGG | + | chr5.2:59572057-59572076 | None:intergenic | 25.0% |
| ! | TATAATTAGGAATGGAATCA+TGG | - | chr5.2:59570535-59570554 | MS.gene44909:intron | 25.0% |
| ! | TGTGTTATAGTAAATCAGAT+TGG | - | chr5.2:59568711-59568730 | MS.gene44909:intron | 25.0% |
| ! | TTAAGAAAATTTCAACACAC+TGG | - | chr5.2:59572241-59572260 | MS.gene44909:intron | 25.0% |
| !! | AAACTTTTGAACAATATCAC+CGG | - | chr5.2:59567958-59567977 | MS.gene44909:intron | 25.0% |
| !! | AATCAATATTAGTTTGGCTT+TGG | - | chr5.2:59570333-59570352 | MS.gene44909:intron | 25.0% |
| !! | TAGTAGCCAATTTTTAACAA+AGG | + | chr5.2:59571813-59571832 | None:intergenic | 25.0% |
| !! | TTGTGTATTGATAAACTTTC+AGG | + | chr5.2:59570221-59570240 | None:intergenic | 25.0% |
| !! | TTTTATCGAATAGATCAACT+CGG | + | chr5.2:59571371-59571390 | None:intergenic | 25.0% |
| !! | TTTTCTATGACTGAAATGTT+GGG | + | chr5.2:59571755-59571774 | None:intergenic | 25.0% |
| !!! | ACATGAAAAACTTGTTACTA+AGG | - | chr5.2:59570846-59570865 | MS.gene44909:intron | 25.0% |
| !!! | CATAGAAGAATTTTGATTGA+TGG | - | chr5.2:59572100-59572119 | MS.gene44909:intron | 25.0% |
| !!! | GATTTTTATTTCAAGGTTTG+TGG | - | chr5.2:59571612-59571631 | MS.gene44909:CDS | 25.0% |
| !!! | GGGAATCAATATTTTTTTGT+TGG | + | chr5.2:59572037-59572056 | None:intergenic | 25.0% |
| !!! | TCTCTCTGATTTTTATTTCA+AGG | - | chr5.2:59571605-59571624 | MS.gene44909:CDS | 25.0% |
| !!! | TTAACACTTTAGTTCTTAGT+GGG | + | chr5.2:59572012-59572031 | None:intergenic | 25.0% |
| !!! | TTAATCATACTTTGAAGTCT+CGG | - | chr5.2:59572780-59572799 | MS.gene44909:intron | 25.0% |
| AAAATAGCGCATAGATTTGT+TGG | - | chr5.2:59569120-59569139 | MS.gene44909:CDS | 30.0% | |
| AAATTCTGTATTTGCCACAA+AGG | + | chr5.2:59570705-59570724 | None:intergenic | 30.0% | |
| AATTCTGTATTTGCCACAAA+GGG | + | chr5.2:59570704-59570723 | None:intergenic | 30.0% | |
| ATGAAATGATTGTGTGAATG+TGG | + | chr5.2:59569434-59569453 | None:intergenic | 30.0% | |
| CAATAATCAATAGCAATAGC+AGG | + | chr5.2:59572532-59572551 | None:intergenic | 30.0% | |
| CAATAATCAATTGCAATAGC+AGG | + | chr5.2:59569228-59569247 | None:intergenic | 30.0% | |
| CATCATGTACCAAAAACATT+TGG | - | chr5.2:59568443-59568462 | MS.gene44909:CDS | 30.0% | |
| CATTTAGATGCAATTGAAAG+TGG | - | chr5.2:59569180-59569199 | MS.gene44909:intron | 30.0% | |
| CTACAACACATTGAATTACT+AGG | + | chr5.2:59572058-59572077 | None:intergenic | 30.0% | |
| CTGCTATTGCAATTGATTAT+TGG | - | chr5.2:59569226-59569245 | MS.gene44909:intron | 30.0% | |
| GACACTATAGTTAAAATGCA+AGG | - | chr5.2:59572877-59572896 | MS.gene44909:CDS | 30.0% | |
| GATTTATACTTCAAGGTATG+TGG | - | chr5.2:59568512-59568531 | MS.gene44909:intron | 30.0% | |
| GTATTTGGATGATTTCTCAT+AGG | - | chr5.2:59568343-59568362 | MS.gene44909:CDS | 30.0% | |
| TCATGTACCAAAAACATTTG+CGG | - | chr5.2:59568445-59568464 | MS.gene44909:CDS | 30.0% | |
| TCATGTACCAAAAACATTTG+GGG | - | chr5.2:59568445-59568464 | MS.gene44909:CDS | 30.0% | |
| TGAAAGTTTAGAGACAACAA+AGG | + | chr5.2:59570143-59570162 | None:intergenic | 30.0% | |
| ! | AACTTATCCGCAAATGTTTT+TGG | + | chr5.2:59571555-59571574 | None:intergenic | 30.0% |
| ! | CATGTGGATTTTCATTAGAT+AGG | - | chr5.2:59569758-59569777 | MS.gene44909:CDS | 30.0% |
| ! | CTGCTATTGCTATTGATTAT+TGG | - | chr5.2:59572530-59572549 | MS.gene44909:intron | 30.0% |
| ! | GTTTTCTATGACTGAAATGT+TGG | + | chr5.2:59571756-59571775 | None:intergenic | 30.0% |
| ! | TGTTGTGTTCATCTTTTTGT+AGG | - | chr5.2:59573098-59573117 | MS.gene44909:CDS | 30.0% |
| !! | AAACTTGTTACTAAGGTCAA+CGG | - | chr5.2:59570853-59570872 | MS.gene44909:intron | 30.0% |
| !! | ACAAATCTATGCGCTATTTT+CGG | + | chr5.2:59569120-59569139 | None:intergenic | 30.0% |
| !! | ACATAGGTTTGTTGGTTATT+TGG | - | chr5.2:59572432-59572451 | MS.gene44909:intron | 30.0% |
| !! | CTTAACACTTTAGTTCTTAG+TGG | + | chr5.2:59572013-59572032 | None:intergenic | 30.0% |
| !! | GACTTTTTCCGTGAAAAAAT+CGG | - | chr5.2:59568662-59568681 | MS.gene44909:intron | 30.0% |
| !! | GCATAGATTTGTTGGTTATT+TGG | - | chr5.2:59569128-59569147 | MS.gene44909:CDS | 30.0% |
| !! | TAGATTTGTTGGTTATTTGG+AGG | - | chr5.2:59569131-59569150 | MS.gene44909:CDS | 30.0% |
| !! | TGTTGTGTTGTACTTTTTGT+AGG | - | chr5.2:59570001-59570020 | MS.gene44909:intron | 30.0% |
| !!! | TTGACAATCCGATTTTTTCA+CGG | + | chr5.2:59568673-59568692 | None:intergenic | 30.0% |
| AAAACAGCACATAGGTTTGT+TGG | - | chr5.2:59572424-59572443 | MS.gene44909:intron | 35.0% | |
| AAAGAGACACTAACTCTGTT+TGG | - | chr5.2:59568052-59568071 | MS.gene44909:CDS | 35.0% | |
| AAATATAACTGCTGCAGGAA+CGG | - | chr5.2:59572137-59572156 | MS.gene44909:CDS | 35.0% | |
| AACATTCAGAACAAACGAAG+AGG | + | chr5.2:59569985-59570004 | None:intergenic | 35.0% | |
| AACATTCAGAGCAAATGAAG+AGG | + | chr5.2:59573082-59573101 | None:intergenic | 35.0% | |
| AAGAATGATGCCAACAACAA+CGG | - | chr5.2:59567669-59567688 | MS.gene44909:intron | 35.0% | |
| ACACATATGGAAACTTCTAC+TGG | - | chr5.2:59567595-59567614 | MS.gene44909:intron | 35.0% | |
| ACCGTAAAAAAGTTTCGTAG+AGG | + | chr5.2:59568776-59568795 | None:intergenic | 35.0% | |
| AGAAAATTTCAACACACTGG+TGG | - | chr5.2:59572244-59572263 | MS.gene44909:intron | 35.0% | |
| ATCTCAAAGTTTACGTCAGT+AGG | - | chr5.2:59568008-59568027 | MS.gene44909:intron | 35.0% | |
| ATGACTCAATGATAACCAAC+AGG | + | chr5.2:59570068-59570087 | None:intergenic | 35.0% | |
| ATGAGTTACTTGATCTTGCA+TGG | - | chr5.2:59568316-59568335 | MS.gene44909:CDS | 35.0% | |
| CACCAAACAATTCCTTGATT+GGG | + | chr5.2:59570256-59570275 | None:intergenic | 35.0% | |
| CAGATCTGTCAAGTTTCTAA+GGG | - | chr5.2:59571581-59571600 | MS.gene44909:CDS | 35.0% | |
| CTAAGAAAATTTCAACACGC+TGG | - | chr5.2:59568937-59568956 | MS.gene44909:intron | 35.0% | |
| CTTTCAATTCCTTTCCTTGA+TGG | + | chr5.2:59570034-59570053 | None:intergenic | 35.0% | |
| GCTCTCTGATTTATACTTCA+AGG | - | chr5.2:59568505-59568524 | MS.gene44909:intron | 35.0% | |
| GTGATGATCATCTATCTACA+GGG | - | chr5.2:59570282-59570301 | MS.gene44909:intron | 35.0% | |
| TAACAACCGGTGAATCAATA+AGG | + | chr5.2:59571874-59571893 | None:intergenic | 35.0% | |
| TATGGTCGTTTAATCGAGAT+AGG | + | chr5.2:59569549-59569568 | None:intergenic | 35.0% | |
| TCAAGGAAAAGAACTGAAAG+AGG | - | chr5.2:59573131-59573150 | MS.gene44909:CDS | 35.0% | |
| TCAAGGAAAGGAATTGAAAG+AGG | - | chr5.2:59570034-59570053 | MS.gene44909:intron | 35.0% | |
| TCACACAATTGACGCATATA+TGG | + | chr5.2:59569567-59569586 | None:intergenic | 35.0% | |
| TCAGATCTGTCAAGTTTCTA+AGG | - | chr5.2:59568480-59568499 | MS.gene44909:CDS | 35.0% | |
| TCAGATCTGTCAAGTTTCTA+CGG | - | chr5.2:59568480-59568499 | MS.gene44909:CDS | 35.0% | |
| TGAAAATAGTAGCTCAAGAG+TGG | + | chr5.2:59570800-59570819 | None:intergenic | 35.0% | |
| TGATTATTGGAGACTTCCTA+AGG | - | chr5.2:59569239-59569258 | MS.gene44909:intron | 35.0% | |
| TGCAATTGAAAGTGGTAAAG+TGG | - | chr5.2:59569188-59569207 | MS.gene44909:intron | 35.0% | |
| TGTTCTCTATATACGATGTC+CGG | - | chr5.2:59571470-59571489 | MS.gene44909:CDS | 35.0% | |
| TTGAACTTGTGAAACCAAGT+TGG | - | chr5.2:59569022-59569041 | MS.gene44909:intron | 35.0% | |
| TTGAAGAAGCAGAGAATGAA+AGG | - | chr5.2:59572284-59572303 | MS.gene44909:intron | 35.0% | |
| TTGTAGGATATTCACCATCA+AGG | - | chr5.2:59570017-59570036 | MS.gene44909:intron | 35.0% | |
| ! | AACTTGTCCCCAAATGTTTT+TGG | + | chr5.2:59568455-59568474 | None:intergenic | 35.0% |
| ! | AAGGATGCATTTGATGACAA+TGG | - | chr5.2:59572303-59572322 | MS.gene44909:intron | 35.0% |
| ! | ATCTGAAATATAACTGCTGC+AGG | - | chr5.2:59572132-59572151 | MS.gene44909:CDS | 35.0% |
| ! | ATTTGTTGGTTATTTGGAGG+AGG | - | chr5.2:59569134-59569153 | MS.gene44909:CDS | 35.0% |
| ! | CTTTCAGTTCTTTTCCTTGA+TGG | + | chr5.2:59573131-59573150 | None:intergenic | 35.0% |
| ! | TCTTTAAGAGTTGCATCCTT+AGG | + | chr5.2:59569258-59569277 | None:intergenic | 35.0% |
| ! | TGTTCTAGTCAGCATTGAAA+CGG | + | chr5.2:59571933-59571952 | None:intergenic | 35.0% |
| !! | ATCTTGCATGGTGTTGTATT+TGG | - | chr5.2:59568328-59568347 | MS.gene44909:CDS | 35.0% |
| !! | CTTTAGTTCTTAGTGGGAAT+AGG | + | chr5.2:59572006-59572025 | None:intergenic | 35.0% |
| !! | CTTTTGGTTATTACTGCACA+AGG | - | chr5.2:59569054-59569073 | MS.gene44909:CDS | 35.0% |
| !! | TAGGTTTGTTGGTTATTTGG+AGG | - | chr5.2:59572435-59572454 | MS.gene44909:intron | 35.0% |
| !! | TTGTTTCTAGCATCATTGCA+TGG | + | chr5.2:59568867-59568886 | None:intergenic | 35.0% |
| !!! | ACAAACCTATGTGCTGTTTT+TGG | + | chr5.2:59572424-59572443 | None:intergenic | 35.0% |
| !!! | ATGTTAGCAGCCACTTTTTT+TGG | + | chr5.2:59570571-59570590 | None:intergenic | 35.0% |
| !!! | GCCTCTACGAAACTTTTTTA+CGG | - | chr5.2:59568772-59568791 | MS.gene44909:intron | 35.0% |
| !!! | TGTTTTTGGTACATGATGCT+TGG | + | chr5.2:59568441-59568460 | None:intergenic | 35.0% |
| AAAAATCCGTTGTCCGACTT+TGG | - | chr5.2:59568626-59568645 | MS.gene44909:intron | 40.0% | |
| AAAAGCCTTTCATGCCAACT+TGG | + | chr5.2:59572343-59572362 | None:intergenic | 40.0% | |
| AAAGGGAAGAAGAAAGGTAG+TGG | + | chr5.2:59570687-59570706 | None:intergenic | 40.0% | |
| AATTTCAACACACTGGTGGT+TGG | - | chr5.2:59572248-59572267 | MS.gene44909:intron | 40.0% | |
| AGAAAATTTCAACACGCTGG+TGG | - | chr5.2:59568940-59568959 | MS.gene44909:intron | 40.0% | |
| CACAATATCTCACCCAATCA+AGG | - | chr5.2:59570241-59570260 | MS.gene44909:intron | 40.0% | |
| CACCCAATCAAGGAATTGTT+TGG | - | chr5.2:59570251-59570270 | MS.gene44909:intron | 40.0% | |
| CAGATCTGTCAAGTTTCTAC+GGG | - | chr5.2:59568481-59568500 | MS.gene44909:CDS | 40.0% | |
| CCAATCAAGGAATTGTTTGG+TGG | - | chr5.2:59570254-59570273 | MS.gene44909:intron | 40.0% | |
| CCACCAAACAATTCCTTGAT+TGG | + | chr5.2:59570257-59570276 | None:intergenic | 40.0% | |
| CTTACCATGAAACAGTTCCA+TGG | + | chr5.2:59571127-59571146 | None:intergenic | 40.0% | |
| GACAATACCAACAACACATG+TGG | + | chr5.2:59571791-59571810 | None:intergenic | 40.0% | |
| GCTGTTATTACCGTTGTTGT+TGG | + | chr5.2:59567682-59567701 | None:intergenic | 40.0% | |
| GGATATTCACCATCAAGGAA+AGG | - | chr5.2:59570022-59570041 | MS.gene44909:intron | 40.0% | |
| GGTGATGATCATCTATCTAC+AGG | - | chr5.2:59570281-59570300 | MS.gene44909:intron | 40.0% | |
| TAATTACGGCAGGAACGATA+TGG | - | chr5.2:59568838-59568857 | MS.gene44909:intron | 40.0% | |
| TACCAACAACACATGTGGTA+TGG | + | chr5.2:59571786-59571805 | None:intergenic | 40.0% | |
| TACCATACCACATGTGTTGT+TGG | - | chr5.2:59571781-59571800 | MS.gene44909:CDS | 40.0% | |
| TACCTTTCTTCTTCCCTTTG+TGG | - | chr5.2:59570688-59570707 | MS.gene44909:intron | 40.0% | |
| TCACATGAGAAGAAGAGACT+TGG | - | chr5.2:59568735-59568754 | MS.gene44909:intron | 40.0% | |
| TCCTAAGGATGCAACTCTTA+AGG | - | chr5.2:59569254-59569273 | MS.gene44909:intron | 40.0% | |
| TCCTTAAGAGTTGCATCCTT+AGG | + | chr5.2:59572562-59572581 | None:intergenic | 40.0% | |
| TCTCACCAAAAACAGCACAT+AGG | - | chr5.2:59572416-59572435 | MS.gene44909:intron | 40.0% | |
| TCTGAACTGTAACTTTCCCA+TGG | + | chr5.2:59568401-59568420 | None:intergenic | 40.0% | |
| TTGAAGAAGCAGAGAATGAG+AGG | - | chr5.2:59568980-59568999 | MS.gene44909:intron | 40.0% | |
| TTGTGATGTTGGATCGAGAT+TGG | - | chr5.2:59569454-59569473 | MS.gene44909:intron | 40.0% | |
| TTGTTAATCAGCCTCGGTTA+AGG | - | chr5.2:59571888-59571907 | MS.gene44909:intron | 40.0% | |
| ! | AAGGAATTGTTTGGTGGTCT+TGG | - | chr5.2:59570260-59570279 | MS.gene44909:intron | 40.0% |
| ! | AAGTTGGCATGAAAGGCTTT+TGG | - | chr5.2:59572342-59572361 | MS.gene44909:intron | 40.0% |
| ! | ATGATCTTTGTTTGCAGCCA+TGG | - | chr5.2:59568381-59568400 | MS.gene44909:CDS | 40.0% |
| ! | GAGGATGCATTTGATGACAA+TGG | - | chr5.2:59568999-59569018 | MS.gene44909:intron | 40.0% |
| ! | GTCATGTGACACTTTTCATG+TGG | - | chr5.2:59569742-59569761 | MS.gene44909:CDS | 40.0% |
| ! | TGAAACCAAGTTGGCATGAA+AGG | - | chr5.2:59572335-59572354 | MS.gene44909:intron | 40.0% |
| ! | TGATCTTTGTTTGCAGCCAT+GGG | - | chr5.2:59568382-59568401 | MS.gene44909:CDS | 40.0% |
| ! | TGTTGGTTATTTGGAGGAAG+AGG | - | chr5.2:59572441-59572460 | MS.gene44909:intron | 40.0% |
| !! | GCACAAGGTGTTTTCTTCAA+TGG | - | chr5.2:59569069-59569088 | MS.gene44909:CDS | 40.0% |
| !! | GTGGTACCTTATTGATTCAC+CGG | - | chr5.2:59571865-59571884 | MS.gene44909:intron | 40.0% |
| !! | TAGAGAGTATTGTCAGTTGC+AGG | - | chr5.2:59569588-59569607 | MS.gene44909:CDS | 40.0% |
| !!! | AAGTCGGACAACGGATTTTT+TGG | + | chr5.2:59568626-59568645 | None:intergenic | 40.0% |
| !!! | TATGTGCTGTTTTTGGTGAG+AGG | + | chr5.2:59572417-59572436 | None:intergenic | 40.0% |
| AAAAGCCTCTCATGCCAACT+TGG | + | chr5.2:59569039-59569058 | None:intergenic | 45.0% | |
| AACCGAGGCTGATTAACAAC+CGG | + | chr5.2:59571887-59571906 | None:intergenic | 45.0% | |
| AATTTCAACACGCTGGTGGT+TGG | - | chr5.2:59568944-59568963 | MS.gene44909:intron | 45.0% | |
| ACCCCAGTAACTCGAAACAA+CGG | + | chr5.2:59567709-59567728 | None:intergenic | 45.0% | |
| AGTGGAAGGTCTCATCAATG+TGG | + | chr5.2:59570669-59570688 | None:intergenic | 45.0% | |
| AGTTTCGTAGAGGCTGAACT+TGG | + | chr5.2:59568766-59568785 | None:intergenic | 45.0% | |
| ATGGAAACTTCTACTGGCAG+AGG | - | chr5.2:59567601-59567620 | MS.gene44909:intron | 45.0% | |
| CAACTATTCGACCTTAACCG+AGG | + | chr5.2:59571902-59571921 | None:intergenic | 45.0% | |
| CAATGATAACCAACAGGAGC+TGG | + | chr5.2:59570062-59570081 | None:intergenic | 45.0% | |
| CACTAGGCCCAAGGTTAAAA+GGG | - | chr5.2:59571084-59571103 | MS.gene44909:intron | 45.0% | |
| CAGTAGGCCTAAGGTTCTTA+AGG | - | chr5.2:59567731-59567750 | MS.gene44909:intron | 45.0% | |
| CCATCCTCCTTAAGAACCTT+AGG | + | chr5.2:59567741-59567760 | None:intergenic | 45.0% | |
| CCTAAGGTTCTTAAGGAGGA+TGG | - | chr5.2:59567738-59567757 | MS.gene44909:intron | 45.0% | |
| CGGTTAAGGTCGAATAGTTG+AGG | - | chr5.2:59571902-59571921 | MS.gene44909:intron | 45.0% | |
| CTGACCTGGTAATCCAAAGT+CGG | + | chr5.2:59568642-59568661 | None:intergenic | 45.0% | |
| CTTACCATGAAGCAGTTCCA+TGG | + | chr5.2:59567774-59567793 | None:intergenic | 45.0% | |
| GAAAAAGGATCAGCAGACAG+AGG | - | chr5.2:59567641-59567660 | MS.gene44909:intron | 45.0% | |
| GGATGTCAATCACTTTGCGT+CGG | - | chr5.2:59572621-59572640 | MS.gene44909:intron | 45.0% | |
| GGTAATCCAAAGTCGGACAA+CGG | + | chr5.2:59568635-59568654 | None:intergenic | 45.0% | |
| GTCAACTCTGCCAGAGAAAA+AGG | - | chr5.2:59570994-59571013 | MS.gene44909:intron | 45.0% | |
| TAGGCCTAAGGTTCTTAAGG+AGG | - | chr5.2:59567734-59567753 | MS.gene44909:intron | 45.0% | |
| TATGATGAGCCTCATCAGCA+CGG | + | chr5.2:59569296-59569315 | None:intergenic | 45.0% | |
| TCAATAGCAATAGCAGGAGC+AGG | + | chr5.2:59572526-59572545 | None:intergenic | 45.0% | |
| TCAATTGCAATAGCAGGAGC+AGG | + | chr5.2:59569222-59569241 | None:intergenic | 45.0% | |
| TCACTAGGCCCAAGGTTAAA+AGG | - | chr5.2:59571083-59571102 | MS.gene44909:intron | 45.0% | |
| TCTGAGCTGTAACTTTCCCA+TGG | + | chr5.2:59571501-59571520 | None:intergenic | 45.0% | |
| TGCCACAAAGGGAAGAAGAA+AGG | + | chr5.2:59570693-59570712 | None:intergenic | 45.0% | |
| TGCCAGAGAAAAAGGATCAG+CGG | - | chr5.2:59571002-59571021 | MS.gene44909:intron | 45.0% | |
| TGCTGATGAGGCTCATCATA+GGG | - | chr5.2:59569296-59569315 | MS.gene44909:intron | 45.0% | |
| TTAAGGAGGATGGAACTGAG+TGG | - | chr5.2:59567748-59567767 | MS.gene44909:intron | 45.0% | |
| TTGTCCGACTTTGGATTACC+AGG | - | chr5.2:59568635-59568654 | MS.gene44909:intron | 45.0% | |
| ! | AAGTTGGCATGAGAGGCTTT+TGG | - | chr5.2:59569038-59569057 | MS.gene44909:CDS | 45.0% |
| ! | CACTGTTATTCGTGCTGATG+AGG | - | chr5.2:59572588-59572607 | MS.gene44909:intron | 45.0% |
| ! | CCATCCTCCCTTTTAACCTT+GGG | + | chr5.2:59571094-59571113 | None:intergenic | 45.0% |
| ! | GTCTGCTGATCCTTTTTCTC+CGG | + | chr5.2:59567639-59567658 | None:intergenic | 45.0% |
| ! | TCCATCCTCCCTTTTAACCT+TGG | + | chr5.2:59571095-59571114 | None:intergenic | 45.0% |
| ! | TGAAACCAAGTTGGCATGAG+AGG | - | chr5.2:59569031-59569050 | MS.gene44909:CDS | 45.0% |
| !! | AGGGTTGATGCTTCACAGAA+TGG | - | chr5.2:59570301-59570320 | MS.gene44909:intron | 45.0% |
| !! | GGAAGAAGAAAGGTAGTGGA+AGG | + | chr5.2:59570683-59570702 | None:intergenic | 45.0% |
| !! | TATGCGCTATTTTCGGTGAG+AGG | + | chr5.2:59569113-59569132 | None:intergenic | 45.0% |
| !! | TATTTAAAAAATGAATTTAA+TGG | - | chr5.2:59570470-59570489 | MS.gene44909:intron | 5.0% |
| !!! | ATTAATTTGAATTATAATTA+CGG | - | chr5.2:59568824-59568843 | MS.gene44909:intron | 5.0% |
| !!! | ATTTTTTAAATATATATCAT+AGG | + | chr5.2:59570462-59570481 | None:intergenic | 5.0% |
| !!! | GTTTAATATAATTTTTTTTT+TGG | + | chr5.2:59572853-59572872 | None:intergenic | 5.0% |
| !!! | TTTTTATTTATTTATAGTTA+TGG | + | chr5.2:59568566-59568585 | None:intergenic | 5.0% |
| AAAAACCGCGGTGATAGCTC+TGG | + | chr5.2:59570901-59570920 | None:intergenic | 50.0% | |
| AAAGGGAGGATGGAACTGAG+TGG | - | chr5.2:59571101-59571120 | MS.gene44909:intron | 50.0% | |
| AATAGCAGCTGTCCCTGGAA+TGG | - | chr5.2:59568885-59568904 | MS.gene44909:intron | 50.0% | |
| CAGTATGGCGGTGACACATA+TGG | - | chr5.2:59567582-59567601 | MS.gene44909:intron | 50.0% | |
| CATATGTGTCACCGCCATAC+TGG | + | chr5.2:59567584-59567603 | None:intergenic | 50.0% | |
| CCCAAGGTTAAAAGGGAGGA+TGG | - | chr5.2:59571091-59571110 | MS.gene44909:intron | 50.0% | |
| CGACTTTGGATTACCAGGTC+AGG | - | chr5.2:59568640-59568659 | MS.gene44909:intron | 50.0% | |
| CGGATGTCATGCAATGATGC+TGG | - | chr5.2:59572162-59572181 | MS.gene44909:CDS | 50.0% | |
| GAAAAAGGATCAGCGGTCAG+AGG | - | chr5.2:59571009-59571028 | MS.gene44909:intron | 50.0% | |
| GAAACAATAGCAGCTGTCCC+TGG | - | chr5.2:59568880-59568899 | MS.gene44909:intron | 50.0% | |
| GTCAACTCTGCCGGAGAAAA+AGG | - | chr5.2:59567626-59567645 | MS.gene44909:intron | 50.0% | |
| GTGGCCATGGAACTGTTTCA+TGG | - | chr5.2:59571120-59571139 | MS.gene44909:intron | 50.0% | |
| TAACTGCTGCAGGAACGGTA+CGG | - | chr5.2:59572142-59572161 | MS.gene44909:CDS | 50.0% | |
| TAACTTTCCCATGGCTGCAC+CGG | + | chr5.2:59571492-59571511 | None:intergenic | 50.0% | |
| TAGGCCCAAGGTTAAAAGGG+AGG | - | chr5.2:59571087-59571106 | MS.gene44909:intron | 50.0% | |
| TCACCGCAGTTGAAAAACCG+CGG | + | chr5.2:59570913-59570932 | None:intergenic | 50.0% | |
| TCACGGAAAAAGTCCTGACC+TGG | + | chr5.2:59568656-59568675 | None:intergenic | 50.0% | |
| TTCTTAGTGGGAATAGGCGC+AGG | + | chr5.2:59572000-59572019 | None:intergenic | 50.0% | |
| ! | CACCGGTTGTTAATCAGCCT+CGG | - | chr5.2:59571882-59571901 | MS.gene44909:intron | 50.0% |
| ! | CACTGTTATCCGTGCTGATG+AGG | - | chr5.2:59569284-59569303 | MS.gene44909:intron | 50.0% |
| ! | CGAGTTACTGGGGTATCAGT+AGG | - | chr5.2:59567715-59567734 | MS.gene44909:intron | 50.0% |
| ! | GACCGCTGATCCTTTTTCTC+TGG | + | chr5.2:59571007-59571026 | None:intergenic | 50.0% |
| ! | GTGCTGATGAGGCTCATCAT+AGG | - | chr5.2:59569295-59569314 | MS.gene44909:intron | 50.0% |
| !! | AAAAGCATCCCTCCCACCAT+TGG | + | chr5.2:59568904-59568923 | None:intergenic | 50.0% |
| !! | ACACCGTCGTTTCGAGTTAC+TGG | - | chr5.2:59571056-59571075 | MS.gene44909:intron | 50.0% |
| !! | ACCGTCGTTTCGAGTTACTG+GGG | - | chr5.2:59571058-59571077 | MS.gene44909:intron | 50.0% |
| !! | ACGCCGTTGTTTCGAGTTAC+TGG | - | chr5.2:59567703-59567722 | MS.gene44909:intron | 50.0% |
| !! | CACCGTCGTTTCGAGTTACT+GGG | - | chr5.2:59571057-59571076 | MS.gene44909:intron | 50.0% |
| !! | CGCCGTTGTTTCGAGTTACT+GGG | - | chr5.2:59567704-59567723 | MS.gene44909:intron | 50.0% |
| !! | GCCGTTGTTTCGAGTTACTG+GGG | - | chr5.2:59567705-59567724 | MS.gene44909:intron | 50.0% |
| !! | TCACCGCGGTTTTTCAACTG+CGG | - | chr5.2:59570907-59570926 | MS.gene44909:intron | 50.0% |
| AAAGAGGCTCCAGCTCCTGT+TGG | - | chr5.2:59570050-59570069 | MS.gene44909:intron | 55.0% | |
| AGGATGGAACTGAGTGGCCA+TGG | - | chr5.2:59567754-59567773 | MS.gene44909:intron | 55.0% | |
| AGTAGCCAGAGCTATCACCG+CGG | - | chr5.2:59570893-59570912 | MS.gene44909:intron | 55.0% | |
| ATGTGTCACCGCCATACTGG+TGG | + | chr5.2:59567581-59567600 | None:intergenic | 55.0% | |
| CCCCCAGTAACTCGAAACGA+CGG | + | chr5.2:59571062-59571081 | None:intergenic | 55.0% | |
| CGAGTTACTGGGGGATCACT+AGG | - | chr5.2:59571068-59571087 | MS.gene44909:intron | 55.0% | |
| CTACCACCGCAGCTTCTCAA+CGG | - | chr5.2:59567533-59567552 | MS.gene44909:intron | 55.0% | |
| GCAGAGGATGTCAACTCTGC+CGG | - | chr5.2:59567617-59567636 | MS.gene44909:intron | 55.0% | |
| GCGCTCTTGGAAGCTTCTAC+TGG | - | chr5.2:59570963-59570982 | MS.gene44909:intron | 55.0% | |
| GGGAATAGGCGCAGGCAATT+TGG | + | chr5.2:59571992-59572011 | None:intergenic | 55.0% | |
| GTGGCCATGGAACTGCTTCA+TGG | - | chr5.2:59567767-59567786 | MS.gene44909:intron | 55.0% | |
| GTTCAGCCGAGACACCAGAA+TGG | - | chr5.2:59570935-59570954 | MS.gene44909:intron | 55.0% | |
| ! | CTGGGGTATCAGTAGGCCTA+AGG | - | chr5.2:59567722-59567741 | MS.gene44909:intron | 55.0% |
| !! | CCGTCGTTTCGAGTTACTGG+GGG | - | chr5.2:59571059-59571078 | MS.gene44909:intron | 55.0% |
| !! | GAGCTTTGTTCCGCAGTGGT+GGG | - | chr5.2:59567508-59567527 | MS.gene44909:CDS | 55.0% |
| !! | GCGCTATTTTCGGTGAGAGG+AGG | + | chr5.2:59569110-59569129 | None:intergenic | 55.0% |
| AATTGCAGCCGTCCCGCCAA+TGG | - | chr5.2:59572189-59572208 | MS.gene44909:CDS | 60.0% | |
| ACGATGTCCGGTGCAGCCAT+GGG | - | chr5.2:59571482-59571501 | MS.gene44909:CDS | 60.0% | |
| AGCAGCTGTCCCTGGAATGG+TGG | - | chr5.2:59568888-59568907 | MS.gene44909:intron | 60.0% | |
| AGCATCCCTCCCACCATTCC+AGG | + | chr5.2:59568901-59568920 | None:intergenic | 60.0% | |
| AGCATCCCTCCCACCATTGG+CGG | + | chr5.2:59572205-59572224 | None:intergenic | 60.0% | |
| CAGCCGAGACACCACCAGTA+TGG | - | chr5.2:59567567-59567586 | MS.gene44909:intron | 60.0% | |
| CAGCCGAGACACCAGAATGG+CGG | - | chr5.2:59570938-59570957 | MS.gene44909:intron | 60.0% | |
| CCACCGCCATTCTGGTGTCT+CGG | + | chr5.2:59570944-59570963 | None:intergenic | 60.0% | |
| CCGAGACACCACCAGTATGG+CGG | - | chr5.2:59567570-59567589 | MS.gene44909:intron | 60.0% | |
| GCAGCTGTCCCTGGAATGGT+GGG | - | chr5.2:59568889-59568908 | MS.gene44909:intron | 60.0% | |
| GCATCCCTCCCACCATTCCA+GGG | + | chr5.2:59568900-59568919 | None:intergenic | 60.0% | |
| GGTGGTAGTTCCCACCACTG+CGG | + | chr5.2:59567521-59567540 | None:intergenic | 60.0% | |
| TACGATGTCCGGTGCAGCCA+TGG | - | chr5.2:59571481-59571500 | MS.gene44909:CDS | 60.0% | |
| TCACCGCCGTTGAGAAGCTG+CGG | + | chr5.2:59567542-59567561 | None:intergenic | 60.0% | |
| ! | CCGCCATACTGGTGGTGTCT+CGG | + | chr5.2:59567573-59567592 | None:intergenic | 60.0% |
| ! | CTGTCCCTGGAATGGTGGGA+GGG | - | chr5.2:59568893-59568912 | MS.gene44909:intron | 60.0% |
| !! | CGAGCTTTGTTCCGCAGTGG+TGG | - | chr5.2:59567507-59567526 | MS.gene44909:CDS | 60.0% |
| !! | GCACGAGCTTTGTTCCGCAG+TGG | - | chr5.2:59567504-59567523 | MS.gene44909:CDS | 60.0% |
| CAGAATGGCGGTGGCGCTCT+TGG | - | chr5.2:59570950-59570969 | MS.gene44909:intron | 65.0% | |
| CCACCGCAGCTTCTCAACGG+CGG | - | chr5.2:59567536-59567555 | MS.gene44909:intron | 65.0% | |
| CCGAGACACCAGAATGGCGG+TGG | - | chr5.2:59570941-59570960 | MS.gene44909:intron | 65.0% | |
| CTGGGGGATCACTAGGCCCA+AGG | - | chr5.2:59571075-59571094 | MS.gene44909:intron | 65.0% | |
| GCATCCCTCCCACCATTGGC+GGG | + | chr5.2:59572204-59572223 | None:intergenic | 65.0% | |
| ! | GCTGTCCCTGGAATGGTGGG+AGG | - | chr5.2:59568892-59568911 | MS.gene44909:intron | 65.0% |
| !! | CAAGAGCGCCACCGCCATTC+TGG | + | chr5.2:59570952-59570971 | None:intergenic | 65.0% |
| CCCTCCCACCATTGGCGGGA+CGG | + | chr5.2:59572200-59572219 | None:intergenic | 70.0% | |
| CCGCCGTTGAGAAGCTGCGG+TGG | + | chr5.2:59567539-59567558 | None:intergenic | 70.0% | |
| GCAGCCGTCCCGCCAATGGT+GGG | - | chr5.2:59572193-59572212 | MS.gene44909:CDS | 70.0% | |
| TGCAGCCGTCCCGCCAATGG+TGG | - | chr5.2:59572192-59572211 | MS.gene44909:CDS | 70.0% | |
| ! | CCGTCCCGCCAATGGTGGGA+GGG | - | chr5.2:59572197-59572216 | MS.gene44909:CDS | 70.0% |
| ! | GCCGTCCCGCCAATGGTGGG+AGG | - | chr5.2:59572196-59572215 | MS.gene44909:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 59567477 | 59573179 | 59567477 | ID=MS.gene44909 |
| chr5.2 | mRNA | 59567477 | 59573179 | 59567477 | ID=MS.gene44909.t1;Parent=MS.gene44909 |
| chr5.2 | exon | 59572868 | 59573179 | 59572868 | ID=MS.gene44909.t1.exon1;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59572868 | 59573179 | 59572868 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59572130 | 59572258 | 59572130 | ID=MS.gene44909.t1.exon2;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59572130 | 59572258 | 59572130 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59571318 | 59571806 | 59571318 | ID=MS.gene44909.t1.exon3;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59571318 | 59571806 | 59571318 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59570585 | 59570633 | 59570585 | ID=MS.gene44909.t1.exon4;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59570585 | 59570633 | 59570585 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59569515 | 59569819 | 59569515 | ID=MS.gene44909.t1.exon5;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59569515 | 59569819 | 59569515 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59569030 | 59569158 | 59569030 | ID=MS.gene44909.t1.exon6;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59569030 | 59569158 | 59569030 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59568014 | 59568502 | 59568014 | ID=MS.gene44909.t1.exon7;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59568014 | 59568502 | 59568014 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| chr5.2 | exon | 59567477 | 59567536 | 59567477 | ID=MS.gene44909.t1.exon8;Parent=MS.gene44909.t1 |
| chr5.2 | CDS | 59567477 | 59567536 | 59567477 | ID=cds.MS.gene44909.t1;Parent=MS.gene44909.t1 |
| Gene Sequence |
| Protein sequence |
