Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene45128 | -0.818708 | 1.70E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene45128 | -0.810763 | 9.81E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene45128 | -0.804267 | 2.34E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene45128 | -0.819514 | 1.12E-52 | -1.69E-46 |
| MS.gene050156 | MS.gene45128 | -0.820886 | 5.41E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene45128 | -0.832714 | 8.08E-56 | -1.69E-46 |
| MS.gene050759 | MS.gene45128 | -0.818741 | 1.67E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene45128 | -0.826054 | 3.35E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene45128 | -0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene051147 | MS.gene45128 | -0.825696 | 4.07E-54 | -1.69E-46 |
| MS.gene051180 | MS.gene45128 | -0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene45128 | -0.818725 | 1.69E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene45128 | -0.813703 | 2.24E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene45128 | -0.835268 | 1.85E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene45128 | -0.809021 | 2.32E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene45128 | -0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene45128 | -0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene45128 | -0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene45128 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene45128 | -0.833194 | 6.14E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene45128 | -0.8217 | 3.51E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene45128 | -0.815662 | 8.24E-52 | -1.69E-46 |
| MS.gene053221 | MS.gene45128 | -0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene45128 | -0.804681 | 1.92E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene45128 | -0.84087 | 6.70E-58 | -1.69E-46 |
| MS.gene05415 | MS.gene45128 | -0.824915 | 6.23E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene45128 | -0.830545 | 2.76E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene45128 | -0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene45128 | 0.847625 | 1.03E-59 | -1.69E-46 |
| MS.gene054467 | MS.gene45128 | -0.840187 | 1.01E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene45128 | -0.817953 | 2.52E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene45128 | -0.808364 | 3.21E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene45128 | -0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene45128 | -0.812632 | 3.85E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene45128 | -0.80641 | 8.34E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene45128 | -0.815018 | 1.15E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene45128 | -0.84003 | 1.11E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene45128 | -0.821591 | 3.72E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene45128 | -0.829373 | 5.34E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene45128 | -0.846515 | 2.07E-59 | -1.69E-46 |
| MS.gene055926 | MS.gene45128 | -0.831491 | 1.62E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene45128 | -0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene45128 | -0.802399 | 5.72E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene45128 | -0.825849 | 3.75E-54 | -1.69E-46 |
| MS.gene056498 | MS.gene45128 | -0.804535 | 2.06E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene45128 | -0.802079 | 6.65E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene45128 | -0.82495 | 6.11E-54 | -1.69E-46 |
| MS.gene057736 | MS.gene45128 | -0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene45128 | -0.833127 | 6.37E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene45128 | -0.852413 | 4.69E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene45128 | -0.816378 | 5.70E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene45128 | -0.816362 | 5.75E-52 | -1.69E-46 |
| MS.gene059664 | MS.gene45128 | -0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene45128 | -0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene060122 | MS.gene45128 | 0.824451 | 8.02E-54 | -1.69E-46 |
| MS.gene060137 | MS.gene45128 | 0.836136 | 1.12E-56 | -1.69E-46 |
| MS.gene060167 | MS.gene45128 | -0.829901 | 3.97E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene45128 | -0.841023 | 6.11E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene45128 | -0.82041 | 6.96E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene45128 | 0.818699 | 1.71E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene45128 | -0.837346 | 5.49E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene45128 | -0.847147 | 1.39E-59 | -1.69E-46 |
| MS.gene060689 | MS.gene45128 | -0.824886 | 6.33E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene45128 | -0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene45128 | -0.860285 | 2.30E-63 | -1.69E-46 |
| MS.gene061040 | MS.gene45128 | 0.832369 | 9.83E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTTTGTCTAAATATTC+AGG | 0.203271 | 5.1:+26441293 | MS.gene45128:CDS |
| CTCGAGGTCGTCGGGGATTG+GGG | 0.228861 | 5.1:-26440760 | None:intergenic |
| ACTCGAGGTCGTCGGGGATT+GGG | 0.272803 | 5.1:-26440761 | None:intergenic |
| AATTAAGGTCTCTGAAAGTT+TGG | 0.284932 | 5.1:-26441273 | None:intergenic |
| GTCGTCGTAGCGTGCGTTCA+TGG | 0.308557 | 5.1:+26441100 | MS.gene45128:intron |
| AGTAGAGATATGGGATTTCT+TGG | 0.308881 | 5.1:+26440729 | None:intergenic |
| ATATTTAGACAAAGTAATTA+AGG | 0.354347 | 5.1:-26441288 | None:intergenic |
| ATCGCTCTCGCCTTCTGCTT+TGG | 0.354959 | 5.1:+26440825 | MS.gene45128:CDS |
| AACTCGAGGTCGTCGGGGAT+TGG | 0.372428 | 5.1:-26440762 | None:intergenic |
| ATTCTTAATGCTGCACATAA+TGG | 0.381497 | 5.1:+26441125 | MS.gene45128:CDS |
| GGAGATAACTCGAGGTCGTC+GGG | 0.416866 | 5.1:-26440768 | None:intergenic |
| ATTAAGGTCTCTGAAAGTTT+GGG | 0.424180 | 5.1:-26441272 | None:intergenic |
| TCGAGGTCGTCGGGGATTGG+GGG | 0.444858 | 5.1:-26440759 | None:intergenic |
| ATGGCACTACCGATCCTTCT+CGG | 0.445701 | 5.1:+26441144 | MS.gene45128:CDS |
| AACCTACACCGGCTTTAAAC+CGG | 0.447734 | 5.1:+26441457 | MS.gene45128:CDS |
| TTACTTTGTCTAAATATTCA+GGG | 0.448785 | 5.1:+26441294 | MS.gene45128:CDS |
| ACATTATTTGTTACCCGAGA+AGG | 0.497121 | 5.1:-26441158 | None:intergenic |
| TGGCACTACCGATCCTTCTC+GGG | 0.498527 | 5.1:+26441145 | MS.gene45128:CDS |
| AAGCAGAAGGCGAGAGCGAT+CGG | 0.498878 | 5.1:-26440822 | None:intergenic |
| TATGTGGAACGACGACTGTA+AGG | 0.499877 | 5.1:+26441910 | MS.gene45128:CDS |
| CTCGCCTTCTGCTTTGGTGT+AGG | 0.509998 | 5.1:+26440831 | MS.gene45128:CDS |
| CTTGACTTCTTTGTACCATA+CGG | 0.516923 | 5.1:-26440966 | None:intergenic |
| TAGGTCATGTTACCTCCGTA+TGG | 0.521416 | 5.1:+26440951 | MS.gene45128:intron |
| CGAGGTCGTCGGGGATTGGG+GGG | 0.522647 | 5.1:-26440758 | None:intergenic |
| CTGATGAAGCGAATTTGAGC+GGG | 0.536765 | 5.1:-26440789 | None:intergenic |
| GGGAGATAACTCGAGGTCGT+CGG | 0.564364 | 5.1:-26440769 | None:intergenic |
| AAAGCTGACCGGTTTAAAGC+CGG | 0.568877 | 5.1:-26441465 | None:intergenic |
| GACTCGGACTCGAGATCTCA+AGG | 0.575497 | 5.1:+26441316 | MS.gene45128:CDS |
| GGTGTAGGTTTCTCGAATGT+AGG | 0.579764 | 5.1:-26441444 | None:intergenic |
| ATTTGTTACCCGAGAAGGAT+CGG | 0.588538 | 5.1:-26441153 | None:intergenic |
| CCTTAAAATCGTAAACGACA+TGG | 0.601425 | 5.1:-26440994 | None:intergenic |
| GACCGGTTTAAAGCCGGTGT+AGG | 0.604444 | 5.1:-26441459 | None:intergenic |
| ACATCCTACACCAAAGCAGA+AGG | 0.604708 | 5.1:-26440835 | None:intergenic |
| GACTTCTTTGTACCATACGG+AGG | 0.618984 | 5.1:-26440963 | None:intergenic |
| TGTCTAAATATTCAGGGACT+CGG | 0.623538 | 5.1:+26441300 | MS.gene45128:CDS |
| TCTGATGAAGCGAATTTGAG+CGG | 0.624893 | 5.1:-26440790 | None:intergenic |
| TACATTCGAGAAACCTACAC+CGG | 0.663662 | 5.1:+26441446 | MS.gene45128:CDS |
| GAGATAACTCGAGGTCGTCG+GGG | 0.698069 | 5.1:-26440767 | None:intergenic |
| TTTGAGCGGGAGATAACTCG+AGG | 0.703118 | 5.1:-26440776 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAGACAAAGTAATTA+AGG | - | chr5.1:26441291-26441310 | None:intergenic | 15.0% |
| !! | ATTCAAATTACTAACTAATT+AGG | - | chr5.1:26441360-26441379 | None:intergenic | 15.0% |
| !!! | AATATCAATTGATAATAGAA+AGG | - | chr5.1:26441207-26441226 | None:intergenic | 15.0% |
| !!! | ATATCAATTGATAATAGAAA+GGG | - | chr5.1:26441206-26441225 | None:intergenic | 15.0% |
| !! | AAAAAAGAATGAAAATGGAT+TGG | - | chr5.1:26441046-26441065 | None:intergenic | 20.0% |
| !! | ATTACTTTGTCTAAATATTC+AGG | + | chr5.1:26441293-26441312 | MS.gene45128:CDS | 20.0% |
| !! | TAGAGAAAAAAGAATGAAAA+TGG | - | chr5.1:26441051-26441070 | None:intergenic | 20.0% |
| !! | TTACTTTGTCTAAATATTCA+GGG | + | chr5.1:26441294-26441313 | MS.gene45128:CDS | 20.0% |
| !!! | TATCAATTGATAATAGAAAG+GGG | - | chr5.1:26441205-26441224 | None:intergenic | 20.0% |
| ! | GATAAATTACAATAGAACGA+TGG | + | chr5.1:26441652-26441671 | MS.gene45128:intron | 25.0% |
| ! | TACTAAATAACATACTGCTA+GGG | + | chr5.1:26441679-26441698 | MS.gene45128:intron | 25.0% |
| ! | TCGTTCTATTGTAATTTATC+AGG | - | chr5.1:26441652-26441671 | None:intergenic | 25.0% |
| !! | TCAAACTGAAGTTTAAAATC+TGG | - | chr5.1:26441879-26441898 | None:intergenic | 25.0% |
| !! | TTTGAATCTTTTTCTCTATG+TGG | + | chr5.1:26441894-26441913 | MS.gene45128:CDS | 25.0% |
| !!! | GGTTTAATTGTTTCTCTTTT+CGG | + | chr5.1:26441700-26441719 | MS.gene45128:intron | 25.0% |
| AAATCCTCCATAAAACACTA+TGG | + | chr5.1:26441553-26441572 | MS.gene45128:intron | 30.0% | |
| AACATGACCTAAAAGGAAAA+AGG | - | chr5.1:26440942-26440961 | None:intergenic | 30.0% | |
| ACACTGTTTGTTTGTTTGTT+TGG | + | chr5.1:26441078-26441097 | MS.gene45128:intron | 30.0% | |
| ATTCTTAATGCTGCACATAA+TGG | + | chr5.1:26441125-26441144 | MS.gene45128:CDS | 30.0% | |
| CACTCGCAAAAGAAAATAAT+TGG | + | chr5.1:26441587-26441606 | MS.gene45128:intron | 30.0% | |
| GTACTAAATAACATACTGCT+AGG | + | chr5.1:26441678-26441697 | MS.gene45128:intron | 30.0% | |
| ! | AATTAAGGTCTCTGAAAGTT+TGG | - | chr5.1:26441276-26441295 | None:intergenic | 30.0% |
| ! | ATTAAGGTCTCTGAAAGTTT+GGG | - | chr5.1:26441275-26441294 | None:intergenic | 30.0% |
| ! | GAAGTTTAAAATCTGGATAG+CGG | - | chr5.1:26441872-26441891 | None:intergenic | 30.0% |
| ! | TAGTGTTTTATGGAGGATTT+TGG | - | chr5.1:26441553-26441572 | None:intergenic | 30.0% |
| ! | TCTCATTCCTTTTTCCTTTT+AGG | + | chr5.1:26440932-26440951 | MS.gene45128:intron | 30.0% |
| !! | ATTTTGGCAGTTTTATACCA+TGG | - | chr5.1:26441537-26441556 | None:intergenic | 30.0% |
| ATCCTGAAAAATGCTATTGC+AGG | - | chr5.1:26441836-26441855 | None:intergenic | 35.0% | |
| CCTTAAAATCGTAAACGACA+TGG | - | chr5.1:26440997-26441016 | None:intergenic | 35.0% | |
| CGTGTTAAGAGAATCAACAA+GGG | - | chr5.1:26441729-26441748 | None:intergenic | 35.0% | |
| CTTGACTTCTTTGTACCATA+CGG | - | chr5.1:26440969-26440988 | None:intergenic | 35.0% | |
| TGTCTAAATATTCAGGGACT+CGG | + | chr5.1:26441300-26441319 | MS.gene45128:CDS | 35.0% | |
| TTATCTATCGATCGTTACCA+TGG | + | chr5.1:26441517-26441536 | MS.gene45128:intron | 35.0% | |
| ! | ACATTATTTGTTACCCGAGA+AGG | - | chr5.1:26441161-26441180 | None:intergenic | 35.0% |
| ! | ATCCTGCAATAGCATTTTTC+AGG | + | chr5.1:26441831-26441850 | MS.gene45128:intron | 35.0% |
| ! | ATTTTCTTTTGCGAGTGTGA+AGG | - | chr5.1:26441584-26441603 | None:intergenic | 35.0% |
| ! | TTTTCTTTTGCGAGTGTGAA+GGG | - | chr5.1:26441583-26441602 | None:intergenic | 35.0% |
| !! | AATGCCTTTAAAACCCTGTA+GGG | - | chr5.1:26441417-26441436 | None:intergenic | 35.0% |
| !! | CCATGTCGTTTACGATTTTA+AGG | + | chr5.1:26440994-26441013 | MS.gene45128:CDS | 35.0% |
| !! | CCTTGTTGATTCTCTTAACA+CGG | + | chr5.1:26441727-26441746 | MS.gene45128:intron | 35.0% |
| AGAGAGAGAATAAAGCTGAC+CGG | - | chr5.1:26441479-26441498 | None:intergenic | 40.0% | |
| CCGTGTTAAGAGAATCAACA+AGG | - | chr5.1:26441730-26441749 | None:intergenic | 40.0% | |
| TACATTCGAGAAACCTACAC+CGG | + | chr5.1:26441446-26441465 | MS.gene45128:CDS | 40.0% | |
| TCTGATGAAGCGAATTTGAG+CGG | - | chr5.1:26440793-26440812 | None:intergenic | 40.0% | |
| ! | ATTTGTTACCCGAGAAGGAT+CGG | - | chr5.1:26441156-26441175 | None:intergenic | 40.0% |
| ! | TTTCTTTTGCGAGTGTGAAG+GGG | - | chr5.1:26441582-26441601 | None:intergenic | 40.0% |
| !! | ATGCCTTTAAAACCCTGTAG+GGG | - | chr5.1:26441416-26441435 | None:intergenic | 40.0% |
| !! | CAATGCCTTTAAAACCCTGT+AGG | - | chr5.1:26441418-26441437 | None:intergenic | 40.0% |
| !!! | CTACAGGGTTTTAAAGGCAT+TGG | + | chr5.1:26441416-26441435 | MS.gene45128:intron | 40.0% |
| ACATCCTACACCAAAGCAGA+AGG | - | chr5.1:26440838-26440857 | None:intergenic | 45.0% | |
| CGGAGGTAACATGACCTAAA+AGG | - | chr5.1:26440949-26440968 | None:intergenic | 45.0% | |
| CTGATGAAGCGAATTTGAGC+GGG | - | chr5.1:26440792-26440811 | None:intergenic | 45.0% | |
| GACTTCTTTGTACCATACGG+AGG | - | chr5.1:26440966-26440985 | None:intergenic | 45.0% | |
| GGTGTAGGTTTCTCGAATGT+AGG | - | chr5.1:26441447-26441466 | None:intergenic | 45.0% | |
| TAGGTCATGTTACCTCCGTA+TGG | + | chr5.1:26440951-26440970 | MS.gene45128:intron | 45.0% | |
| ! | AAAGCTGACCGGTTTAAAGC+CGG | - | chr5.1:26441468-26441487 | None:intergenic | 45.0% |
| ! | TTCTTTTGCGAGTGTGAAGG+GGG | - | chr5.1:26441581-26441600 | None:intergenic | 45.0% |
| !! | AACCTACACCGGCTTTAAAC+CGG | + | chr5.1:26441457-26441476 | MS.gene45128:CDS | 45.0% |
| !! | TGCCTTTAAAACCCTGTAGG+GGG | - | chr5.1:26441415-26441434 | None:intergenic | 45.0% |
| !! | TTTGTTTTCACCCCCCTACA+GGG | + | chr5.1:26441401-26441420 | MS.gene45128:intron | 45.0% |
| ATGGCACTACCGATCCTTCT+CGG | + | chr5.1:26441144-26441163 | MS.gene45128:CDS | 50.0% | |
| TTTGAGCGGGAGATAACTCG+AGG | - | chr5.1:26440779-26440798 | None:intergenic | 50.0% | |
| ! | GGCGCCATAGTGTTTTATGG+AGG | - | chr5.1:26441560-26441579 | None:intergenic | 50.0% |
| !! | ACCCCCCTACAGGGTTTTAA+AGG | + | chr5.1:26441410-26441429 | MS.gene45128:intron | 50.0% |
| !! | GCCTTTAAAACCCTGTAGGG+GGG | - | chr5.1:26441414-26441433 | None:intergenic | 50.0% |
| !!! | CTTTGTTTTCACCCCCCTAC+AGG | + | chr5.1:26441400-26441419 | MS.gene45128:intron | 50.0% |
| AAGCAGAAGGCGAGAGCGAT+CGG | - | chr5.1:26440825-26440844 | None:intergenic | 55.0% | |
| ATCGCTCTCGCCTTCTGCTT+TGG | + | chr5.1:26440825-26440844 | MS.gene45128:CDS | 55.0% | |
| GACTCGGACTCGAGATCTCA+AGG | + | chr5.1:26441316-26441335 | MS.gene45128:CDS | 55.0% | |
| GAGATAACTCGAGGTCGTCG+GGG | - | chr5.1:26440770-26440789 | None:intergenic | 55.0% | |
| GGAGATAACTCGAGGTCGTC+GGG | - | chr5.1:26440771-26440790 | None:intergenic | 55.0% | |
| GGGAGATAACTCGAGGTCGT+CGG | - | chr5.1:26440772-26440791 | None:intergenic | 55.0% | |
| TGGCACTACCGATCCTTCTC+GGG | + | chr5.1:26441145-26441164 | MS.gene45128:CDS | 55.0% | |
| ! | CTCGCCTTCTGCTTTGGTGT+AGG | + | chr5.1:26440831-26440850 | MS.gene45128:CDS | 55.0% |
| ! | GACCGGTTTAAAGCCGGTGT+AGG | - | chr5.1:26441462-26441481 | None:intergenic | 55.0% |
| !!! | GGGGGCGCCATAGTGTTTTA+TGG | - | chr5.1:26441563-26441582 | None:intergenic | 55.0% |
| AACTCGAGGTCGTCGGGGAT+TGG | - | chr5.1:26440765-26440784 | None:intergenic | 60.0% | |
| ACTCGAGGTCGTCGGGGATT+GGG | - | chr5.1:26440764-26440783 | None:intergenic | 60.0% | |
| GTCGTCGTAGCGTGCGTTCA+TGG | + | chr5.1:26441100-26441119 | MS.gene45128:intron | 60.0% | |
| CTCGAGGTCGTCGGGGATTG+GGG | - | chr5.1:26440763-26440782 | None:intergenic | 65.0% | |
| TCGAGGTCGTCGGGGATTGG+GGG | - | chr5.1:26440762-26440781 | None:intergenic | 65.0% | |
| CGAGGTCGTCGGGGATTGGG+GGG | - | chr5.1:26440761-26440780 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 26440738 | 26441930 | 26440738 | ID=MS.gene45128 |
| chr5.1 | mRNA | 26440738 | 26441930 | 26440738 | ID=MS.gene45128.t1;Parent=MS.gene45128 |
| chr5.1 | exon | 26440738 | 26440855 | 26440738 | ID=MS.gene45128.t1.exon1;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26440738 | 26440855 | 26440738 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| chr5.1 | exon | 26440954 | 26441015 | 26440954 | ID=MS.gene45128.t1.exon2;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26440954 | 26441015 | 26440954 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| chr5.1 | exon | 26441110 | 26441166 | 26441110 | ID=MS.gene45128.t1.exon3;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26441110 | 26441166 | 26441110 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| chr5.1 | exon | 26441263 | 26441337 | 26441263 | ID=MS.gene45128.t1.exon4;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26441263 | 26441337 | 26441263 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| chr5.1 | exon | 26441422 | 26441478 | 26441422 | ID=MS.gene45128.t1.exon5;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26441422 | 26441478 | 26441422 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| chr5.1 | exon | 26441880 | 26441930 | 26441880 | ID=MS.gene45128.t1.exon6;Parent=MS.gene45128.t1 |
| chr5.1 | CDS | 26441880 | 26441930 | 26441880 | ID=cds.MS.gene45128.t1;Parent=MS.gene45128.t1 |
| Gene Sequence |
| Protein sequence |
