Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47661.t1 | XP_024640189.1 | 80.3 | 680 | 17 | 1 | 1 | 563 | 1 | 680 | 0.00E+00 | 1090.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47661.t1 | Q9SZL8 | 37.1 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 8.3e-48 | 193.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47661.t1 | A0A396HW08 | 80.3 | 680 | 17 | 1 | 1 | 563 | 1 | 680 | 0.0e+00 | 1090.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47661.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene47661 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene049159 | MS.gene47661 | 0.826122 | 3.23E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene47661 | 0.818585 | 1.82E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene47661 | 0.802021 | 6.84E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene47661 | 0.807328 | 5.33E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene47661 | 0.807908 | 4.02E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene47661 | 0.806971 | 6.35E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene47661 | 0.807284 | 5.45E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene47661 | 0.826566 | 2.53E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene47661 | 0.844899 | 5.68E-59 | -1.69E-46 |
| MS.gene050551 | MS.gene47661 | 0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene47661 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene47661 | 0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene47661 | 0.81513 | 1.08E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene47661 | 0.834796 | 2.44E-56 | -1.69E-46 |
| MS.gene05157 | MS.gene47661 | 0.804164 | 2.46E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene47661 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene47661 | 0.840862 | 6.73E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene47661 | 0.829349 | 5.41E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene47661 | 0.835532 | 1.59E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene47661 | 0.816399 | 5.64E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene47661 | 0.827157 | 1.83E-54 | -1.69E-46 |
| MS.gene052323 | MS.gene47661 | 0.821761 | 3.40E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene47661 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene47661 | 0.841627 | 4.24E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene47661 | 0.803811 | 2.92E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene47661 | 0.802704 | 4.94E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene47661 | 0.804704 | 1.90E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene47661 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene47661 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene47661 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene47661 | 0.808671 | 2.76E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene47661 | 0.84883 | 4.77E-60 | -1.69E-46 |
| MS.gene053226 | MS.gene47661 | 0.855411 | 6.42E-62 | -1.69E-46 |
| MS.gene053621 | MS.gene47661 | 0.807495 | 4.92E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene47661 | 0.817777 | 2.77E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene47661 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene054467 | MS.gene47661 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene47661 | 0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene47661 | 0.843985 | 1.00E-58 | -1.69E-46 |
| MS.gene054775 | MS.gene47661 | 0.835094 | 2.05E-56 | -1.69E-46 |
| MS.gene054991 | MS.gene47661 | 0.8053 | 1.43E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene47661 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene47661 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene47661 | 0.818869 | 1.56E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene47661 | 0.843264 | 1.56E-58 | -1.69E-46 |
| MS.gene055513 | MS.gene47661 | 0.834211 | 3.42E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene47661 | 0.822923 | 1.83E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene47661 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene47661 | 0.814833 | 1.26E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene47661 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene47661 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene47661 | 0.819781 | 9.70E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene47661 | 0.828938 | 6.80E-55 | -1.69E-46 |
| MS.gene056507 | MS.gene47661 | 0.818419 | 1.98E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene47661 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene47661 | 0.835663 | 1.47E-56 | -1.69E-46 |
| MS.gene057034 | MS.gene47661 | 0.804066 | 2.58E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene47661 | 0.817989 | 2.48E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene47661 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene057869 | MS.gene47661 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene47661 | 0.859835 | 3.14E-63 | -1.69E-46 |
| MS.gene058625 | MS.gene47661 | 0.842512 | 2.47E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene47661 | 0.816084 | 6.64E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene47661 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene058829 | MS.gene47661 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene47661 | 0.812178 | 4.83E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene47661 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene47661 | 0.820205 | 7.76E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene47661 | 0.834243 | 3.35E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene47661 | 0.838553 | 2.69E-57 | -1.69E-46 |
| MS.gene059842 | MS.gene47661 | 0.825032 | 5.85E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene47661 | 0.807014 | 6.22E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene47661 | 0.836986 | 6.78E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene47661 | 0.831325 | 1.78E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene47661 | 0.829852 | 4.08E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47661.t1 | MTR_0856s0010 | 61.250 | 160 | 52 | 2 | 1 | 150 | 1 | 160 | 1.94e-58 | 194 |
| MS.gene47661.t1 | MTR_5g089200 | 71.429 | 77 | 14 | 1 | 591 | 659 | 227 | 303 | 1.46e-22 | 102 |
| MS.gene47661.t1 | MTR_5g089280 | 68.831 | 77 | 16 | 1 | 591 | 659 | 235 | 311 | 6.62e-22 | 100 |
| MS.gene47661.t1 | MTR_5g089280 | 68.831 | 77 | 16 | 1 | 591 | 659 | 235 | 311 | 7.65e-22 | 100 |
| MS.gene47661.t1 | MTR_6g022070 | 29.412 | 153 | 102 | 3 | 198 | 348 | 1 | 149 | 2.36e-14 | 75.1 |
| MS.gene47661.t1 | MTR_7g074790 | 26.471 | 170 | 107 | 5 | 22 | 187 | 3 | 158 | 4.02e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47661.t1 | AT4G38180 | 37.091 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 7.77e-53 | 195 |
| MS.gene47661.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.23e-50 | 189 |
| MS.gene47661.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.23e-50 | 189 |
| MS.gene47661.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.23e-50 | 189 |
| MS.gene47661.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.23e-50 | 189 |
| MS.gene47661.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 1.23e-50 | 189 |
| MS.gene47661.t1 | AT1G52520 | 33.131 | 329 | 217 | 3 | 193 | 518 | 362 | 690 | 1.63e-50 | 187 |
| MS.gene47661.t1 | AT3G22170 | 32.787 | 305 | 194 | 3 | 205 | 508 | 362 | 656 | 6.89e-49 | 184 |
| MS.gene47661.t1 | AT3G22170 | 32.787 | 305 | 194 | 3 | 205 | 508 | 362 | 656 | 6.89e-49 | 184 |
| MS.gene47661.t1 | AT1G76320 | 29.208 | 404 | 273 | 5 | 193 | 594 | 278 | 670 | 2.23e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 4.60e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 244 | 561 | 5.73e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 5.88e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 5.88e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 5.88e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 5.93e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 285 | 602 | 5.93e-44 | 169 |
| MS.gene47661.t1 | AT2G32250 | 32.523 | 329 | 208 | 6 | 193 | 518 | 244 | 561 | 6.37e-44 | 169 |
| MS.gene47661.t1 | AT1G76320 | 32.326 | 331 | 208 | 6 | 193 | 518 | 278 | 597 | 1.80e-43 | 167 |
| MS.gene47661.t1 | AT1G76320 | 28.777 | 417 | 283 | 6 | 193 | 607 | 278 | 682 | 1.86e-43 | 167 |
| MS.gene47661.t1 | AT1G76320 | 28.777 | 417 | 283 | 6 | 193 | 607 | 278 | 682 | 1.86e-43 | 167 |
| MS.gene47661.t1 | AT4G38170 | 31.618 | 272 | 180 | 3 | 196 | 466 | 133 | 399 | 1.05e-41 | 159 |
| MS.gene47661.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 5.07e-37 | 148 |
| MS.gene47661.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 5.07e-37 | 148 |
| MS.gene47661.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 5.07e-37 | 148 |
| MS.gene47661.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 229 | 526 | 1.57e-36 | 146 |
| MS.gene47661.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 2.72e-36 | 146 |
| MS.gene47661.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 2.72e-36 | 146 |
| MS.gene47661.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 2.85e-36 | 145 |
| MS.gene47661.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 2.85e-36 | 145 |
| MS.gene47661.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 286 | 583 | 3.14e-36 | 145 |
| MS.gene47661.t1 | AT4G19990 | 30.195 | 308 | 202 | 5 | 188 | 492 | 300 | 597 | 3.18e-36 | 145 |
| MS.gene47661.t1 | AT4G19990 | 30.065 | 306 | 205 | 4 | 188 | 492 | 286 | 583 | 4.03e-36 | 145 |
| MS.gene47661.t1 | AT4G19990 | 30.065 | 306 | 205 | 4 | 188 | 492 | 286 | 583 | 4.03e-36 | 145 |
| MS.gene47661.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 167 | 475 | 4.30e-36 | 145 |
| MS.gene47661.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 7.26e-35 | 142 |
| MS.gene47661.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 7.26e-35 | 142 |
| MS.gene47661.t1 | AT1G80010 | 28.159 | 277 | 196 | 3 | 193 | 467 | 387 | 662 | 2.72e-29 | 124 |
| MS.gene47661.t1 | AT1G10240 | 26.502 | 283 | 187 | 6 | 186 | 463 | 338 | 604 | 2.00e-25 | 112 |
| MS.gene47661.t1 | AT1G10240 | 26.502 | 283 | 187 | 6 | 186 | 463 | 338 | 604 | 2.00e-25 | 112 |
| MS.gene47661.t1 | AT5G12200 | 63.636 | 77 | 20 | 1 | 591 | 659 | 223 | 299 | 4.19e-20 | 94.7 |
| MS.gene47661.t1 | AT5G28530 | 20.769 | 520 | 311 | 14 | 27 | 463 | 50 | 551 | 5.51e-19 | 91.7 |
| MS.gene47661.t1 | AT5G28530 | 20.577 | 520 | 316 | 14 | 27 | 463 | 50 | 555 | 4.78e-18 | 88.6 |
| MS.gene47661.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 2.54e-16 | 83.2 |
| MS.gene47661.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 2.54e-16 | 83.2 |
| MS.gene47661.t1 | AT5G28530 | 23.420 | 269 | 192 | 5 | 197 | 463 | 362 | 618 | 1.89e-15 | 80.5 |
Find 109 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGAACTTCTTTGAATT+TGG | 0.140264 | 5.2:-75755500 | None:intergenic |
| AACAATGAACAGCATTTAAT+TGG | 0.170712 | 5.2:+75754599 | MS.gene47661:CDS |
| TAGAGAGTATGCTTTGAAAA+AGG | 0.184139 | 5.2:+75754196 | MS.gene47661:CDS |
| CGAGGGAGCACAATTCATTT+TGG | 0.189374 | 5.2:-75755533 | None:intergenic |
| CACGCCATAGGTGGTGTTTA+TGG | 0.257699 | 5.2:+75755029 | MS.gene47661:CDS |
| CTTGGACTAACTGGTCTTAA+AGG | 0.272670 | 5.2:+75757166 | MS.gene47661:CDS |
| TAAATTGATGTAATGTTTCA+TGG | 0.277147 | 5.2:-75755939 | None:intergenic |
| CTTCAAAGTTGTGTTTAATC+AGG | 0.287821 | 5.2:+75755636 | MS.gene47661:CDS |
| ACGAATACAGTGAATATAAA+AGG | 0.308487 | 5.2:+75755083 | MS.gene47661:CDS |
| GACCAGCCCTACAAAGAAAA+TGG | 0.313866 | 5.2:+75754439 | MS.gene47661:CDS |
| TGTTCGTTGTTTGAGTTTAG+AGG | 0.315013 | 5.2:+75755682 | MS.gene47661:CDS |
| AATAGATCGGAAAGTCTTAA+TGG | 0.322660 | 5.2:-75754513 | None:intergenic |
| ATGATAGAACTTGGACTAAC+TGG | 0.323580 | 5.2:+75757157 | MS.gene47661:CDS |
| TGAATTCCAGCACCATTGTT+TGG | 0.354475 | 5.2:-75756021 | None:intergenic |
| TTCCAACTTAATACAAATCT+TGG | 0.361351 | 5.2:-75754366 | None:intergenic |
| TGCCAAGATTTGTATTAAGT+TGG | 0.381892 | 5.2:+75754364 | MS.gene47661:CDS |
| TTGAAACTTCATGGATAGTT+CGG | 0.390728 | 5.2:+75754043 | None:intergenic |
| TTATGCTTCAACATAATGAT+TGG | 0.395255 | 5.2:+75755191 | MS.gene47661:CDS |
| TGGAATTCACAGTCCATTGC+GGG | 0.395864 | 5.2:+75756035 | MS.gene47661:CDS |
| TATGATACACACACAACAAC+TGG | 0.402034 | 5.2:+75755133 | MS.gene47661:CDS |
| AGCATGCATGCTTTCTTTGA+TGG | 0.408186 | 5.2:+75755307 | MS.gene47661:CDS |
| CACCACCTATGGCGTGTTGT+AGG | 0.409794 | 5.2:-75755022 | None:intergenic |
| TTAAAGGACATCTTCTTTCA+AGG | 0.412333 | 5.2:+75757182 | MS.gene47661:CDS |
| GCATGTTGGAAGCCTGCAAC+GGG | 0.415038 | 5.2:+75754134 | MS.gene47661:CDS |
| CTTTGCTACTTATCATGTGT+TGG | 0.420954 | 5.2:+75755576 | MS.gene47661:CDS |
| TGCTACTTATCATGTGTTGG+AGG | 0.424099 | 5.2:+75755579 | MS.gene47661:CDS |
| TGTATGAAGAGCGTCATAGA+TGG | 0.424359 | 5.2:+75755224 | MS.gene47661:CDS |
| GCCATGGTCCATGCAGGAAA+TGG | 0.426039 | 5.2:+75757106 | MS.gene47661:intron |
| ATCGTGAAGGTTCTAAAATC+AGG | 0.426549 | 5.2:+75757414 | MS.gene47661:CDS |
| CTTGTTAAAACATACTTCTC+TGG | 0.429704 | 5.2:-75755760 | None:intergenic |
| AATGTGTAGGAGTGCAATAT+TGG | 0.431270 | 5.2:+75756193 | MS.gene47661:intron |
| CAGCATTTAATTGGAAAAGA+AGG | 0.443510 | 5.2:+75754608 | MS.gene47661:CDS |
| CTGTCTGTCATTACTTCGCT+TGG | 0.445713 | 5.2:-75756084 | None:intergenic |
| AACATTCACAGCTGAAATCA+TGG | 0.450961 | 5.2:-75755663 | None:intergenic |
| TTGGAGGAGGTTGTAGTTGG+AGG | 0.455878 | 5.2:+75755595 | MS.gene47661:CDS |
| ACATCAATTTAAGTGTAGTA+AGG | 0.462673 | 5.2:+75755951 | MS.gene47661:CDS |
| CAACAGAAAATGATAGAACT+TGG | 0.466596 | 5.2:+75757148 | MS.gene47661:CDS |
| ATTGAGGTTGTCAGTGGTGG+TGG | 0.468328 | 5.2:+75756262 | MS.gene47661:CDS |
| TGTATTAAGTTGGAAAAGGA+TGG | 0.471002 | 5.2:+75754374 | MS.gene47661:CDS |
| GCATGCATGCTTTCTTTGAT+GGG | 0.490315 | 5.2:+75755308 | MS.gene47661:CDS |
| AGTTGGAAAAGGATGGTTTG+TGG | 0.490374 | 5.2:+75754381 | MS.gene47661:CDS |
| GTGTTGGAGGAGGTTGTAGT+TGG | 0.490830 | 5.2:+75755592 | MS.gene47661:CDS |
| GATTTGTATTAAGTTGGAAA+AGG | 0.491914 | 5.2:+75754370 | MS.gene47661:CDS |
| CAACATAATGATTGGTTGAG+TGG | 0.494843 | 5.2:+75755199 | MS.gene47661:CDS |
| TCAAATCCAAACAATGGTGC+TGG | 0.496584 | 5.2:+75756015 | MS.gene47661:CDS |
| AATTGAAGCCACAGATGGAC+AGG | 0.502360 | 5.2:+75755842 | MS.gene47661:CDS |
| AACTTAATACAAATCTTGGC+AGG | 0.506782 | 5.2:-75754362 | None:intergenic |
| ATCTGTGTGTTCACGAGAGA+GGG | 0.507673 | 5.2:+75755726 | MS.gene47661:CDS |
| TGTAATGAGCATTGATGTAA+TGG | 0.508685 | 5.2:+75757386 | MS.gene47661:CDS |
| ACCACCTATGGCGTGTTGTA+GGG | 0.509756 | 5.2:-75755021 | None:intergenic |
| ATTCTTGTTTGCACAAGAGA+GGG | 0.511572 | 5.2:+75754278 | MS.gene47661:CDS |
| AATGGAGATGATGTTTATGC+AGG | 0.512599 | 5.2:+75757124 | MS.gene47661:CDS |
| AGAATCTGAAGATGCAACTA+AGG | 0.521210 | 5.2:+75755912 | MS.gene47661:CDS |
| CGGGTTAAATGTGAAGATCA+AGG | 0.521428 | 5.2:+75756054 | MS.gene47661:CDS |
| TATGCCATAAACACCACCTA+TGG | 0.521771 | 5.2:-75755033 | None:intergenic |
| TACTTATCATGTGTTGGAGG+AGG | 0.523219 | 5.2:+75755582 | MS.gene47661:CDS |
| GCCTTAGCCATGGTCCATGC+AGG | 0.523996 | 5.2:+75757100 | MS.gene47661:intron |
| ATCGAAATCAATGATGATGC+AGG | 0.524055 | 5.2:+75754482 | MS.gene47661:CDS |
| AACATAATGATTGGTTGAGT+GGG | 0.524704 | 5.2:+75755200 | MS.gene47661:CDS |
| GCAAACAAGAATTGCATAGC+AGG | 0.525492 | 5.2:-75754267 | None:intergenic |
| TGCACAAGAGAGGGGTCTCA+AGG | 0.531486 | 5.2:+75754287 | MS.gene47661:CDS |
| ATCTATGTAGTTGGAAGGAG+AGG | 0.532620 | 5.2:+75757329 | MS.gene47661:intron |
| AAGCATAAACTTGTCGATGA+AGG | 0.533024 | 5.2:-75755176 | None:intergenic |
| TCTTCACATTTAACCCGCAA+TGG | 0.533346 | 5.2:-75756048 | None:intergenic |
| TAGTATTCATGATGAAGGTA+TGG | 0.538379 | 5.2:+75754085 | MS.gene47661:CDS |
| CCCTCGTTGAATGTTGTCGA+GGG | 0.543640 | 5.2:+75755550 | MS.gene47661:CDS |
| TGTGATAGTATTCATGATGA+AGG | 0.546656 | 5.2:+75754080 | MS.gene47661:CDS |
| CAATTTAAGTGTAGTAAGGA+TGG | 0.555667 | 5.2:+75755955 | MS.gene47661:CDS |
| TTTATATCTATGTAGTTGGA+AGG | 0.557118 | 5.2:+75757324 | MS.gene47661:intron |
| AGGATCAAGTCTGCGATGGA+AGG | 0.560217 | 5.2:+75755103 | MS.gene47661:CDS |
| CCGCATTGTTGACAATAGAT+CGG | 0.561490 | 5.2:-75754526 | None:intergenic |
| TATCTGTGTGTTCACGAGAG+AGG | 0.565938 | 5.2:+75755725 | MS.gene47661:CDS |
| TAAAAGGATCAAGTCTGCGA+TGG | 0.569182 | 5.2:+75755099 | MS.gene47661:CDS |
| TTGTCAAACCTGTCCATCTG+TGG | 0.569297 | 5.2:-75755850 | None:intergenic |
| CATCATCTCCATTTCCTGCA+TGG | 0.572541 | 5.2:-75757114 | None:intergenic |
| TCCCTCGTTGAATGTTGTCG+AGG | 0.574922 | 5.2:+75755549 | MS.gene47661:CDS |
| GTATGAAGAGCGTCATAGAT+GGG | 0.575034 | 5.2:+75755225 | MS.gene47661:CDS |
| CTGGAATTCACAGTCCATTG+CGG | 0.575404 | 5.2:+75756034 | MS.gene47661:CDS |
| TGGCATGAGTGTACTCACCT+TGG | 0.576261 | 5.2:-75755480 | None:intergenic |
| AATTCTTGTTTGCACAAGAG+AGG | 0.579543 | 5.2:+75754277 | MS.gene47661:CDS |
| CTATGTAGAATCATCTATTG+AGG | 0.583723 | 5.2:+75756246 | MS.gene47661:CDS |
| TCCATTTCCTGCATGGACCA+TGG | 0.584019 | 5.2:-75757107 | None:intergenic |
| TCTATTGTCAACAATGCGGA+AGG | 0.586150 | 5.2:+75754530 | MS.gene47661:CDS |
| AGCATGTTGGAAGCCTGCAA+CGG | 0.586912 | 5.2:+75754133 | MS.gene47661:CDS |
| TCCATTGAAAAGCAATTCCA+AGG | 0.588119 | 5.2:+75755463 | MS.gene47661:CDS |
| AGTTGCATCTTCAGATTCTG+CGG | 0.590083 | 5.2:-75755908 | None:intergenic |
| TATTGTGACAGACCAATGTA+AGG | 0.594260 | 5.2:+75754970 | MS.gene47661:intron |
| TCTATTGAGGTTGTCAGTGG+TGG | 0.597149 | 5.2:+75756259 | MS.gene47661:CDS |
| ATGGAGATGATGTTTATGCA+GGG | 0.598515 | 5.2:+75757125 | MS.gene47661:CDS |
| CTGATGATGATGAAGCATGT+TGG | 0.601790 | 5.2:+75754120 | MS.gene47661:CDS |
| TCTTCTTTCAAGGCGTGCAG+TGG | 0.604982 | 5.2:+75757192 | MS.gene47661:CDS |
| TGTAGGGAAGACTAACTCAA+TGG | 0.612233 | 5.2:-75755005 | None:intergenic |
| TCTTCCCTACAACACGCCAT+AGG | 0.617216 | 5.2:+75755017 | MS.gene47661:CDS |
| GATGACTCAAATCCAAACAA+TGG | 0.622244 | 5.2:+75756009 | MS.gene47661:CDS |
| TTCTTGTTTGCACAAGAGAG+GGG | 0.624091 | 5.2:+75754279 | MS.gene47661:CDS |
| GCACAAGAGAGGGGTCTCAA+GGG | 0.625092 | 5.2:+75754288 | MS.gene47661:CDS |
| TCCCTACAACACGCCATAGG+TGG | 0.629132 | 5.2:+75755020 | MS.gene47661:CDS |
| GAGAGAATTGAAGCCACAGA+TGG | 0.631735 | 5.2:+75755837 | MS.gene47661:CDS |
| TCAATGATGATGCAGGAGTG+AGG | 0.638777 | 5.2:+75754489 | MS.gene47661:CDS |
| TCATCTATTGAGGTTGTCAG+TGG | 0.640747 | 5.2:+75756256 | MS.gene47661:CDS |
| CCCTCGACAACATTCAACGA+GGG | 0.645738 | 5.2:-75755550 | None:intergenic |
| CAGATAACACATGACAACAC+AGG | 0.666939 | 5.2:-75755708 | None:intergenic |
| CTATTGTCAACAATGCGGAA+GGG | 0.669349 | 5.2:+75754531 | MS.gene47661:CDS |
| TCGCGCTATTCACTTATACG+TGG | 0.671636 | 5.2:+75757359 | MS.gene47661:CDS |
| GTAGGAGTGCAATATTGGAA+TGG | 0.673951 | 5.2:+75756198 | MS.gene47661:intron |
| TGTAATGGAAGAAATCGTGA+AGG | 0.687566 | 5.2:+75757401 | MS.gene47661:CDS |
| CCGATCTATTGTCAACAATG+CGG | 0.696000 | 5.2:+75754526 | MS.gene47661:CDS |
| CATGTTGGAAGCCTGCAACG+GGG | 0.757747 | 5.2:+75754135 | MS.gene47661:CDS |
| ACCCTCGACAACATTCAACG+AGG | 0.768012 | 5.2:-75755551 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTATGTACTTTATT+AGG | + | chr5.2:75756447-75756466 | MS.gene47661:intron | 10.0% |
| !!! | TAGTTAACATAATTTTATAA+TGG | - | chr5.2:75756318-75756337 | None:intergenic | 10.0% |
| !! | ATTCAATATACATACATATA+TGG | - | chr5.2:75756153-75756172 | None:intergenic | 15.0% |
| !! | TAACATTTCTAATGAAAATA+AGG | + | chr5.2:75756573-75756592 | MS.gene47661:intron | 15.0% |
| !! | TTAACTAATGTTTAAATTCA+TGG | + | chr5.2:75756331-75756350 | MS.gene47661:intron | 15.0% |
| !!! | ATTTGTTTACTTTTGAAATA+GGG | + | chr5.2:75756933-75756952 | MS.gene47661:intron | 15.0% |
| !!! | CTTTGTAAGAAAATATTTTT+GGG | + | chr5.2:75755255-75755274 | MS.gene47661:CDS | 15.0% |
| !!! | TATTTGTTTACTTTTGAAAT+AGG | + | chr5.2:75756932-75756951 | MS.gene47661:intron | 15.0% |
| !! | CATATTTATATCTATGTAGT+TGG | + | chr5.2:75757320-75757339 | MS.gene47661:intron | 20.0% |
| !! | GATGGAAGAAAAATATTAAA+AGG | + | chr5.2:75755782-75755801 | MS.gene47661:CDS | 20.0% |
| !! | TAAATTGATGTAATGTTTCA+TGG | - | chr5.2:75755942-75755961 | None:intergenic | 20.0% |
| !!! | AAATATTTTCTTACAAAGGT+TGG | - | chr5.2:75755253-75755272 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTACAA+AGG | - | chr5.2:75755257-75755276 | None:intergenic | 20.0% |
| !!! | CCTTTGTAAGAAAATATTTT+TGG | + | chr5.2:75755254-75755273 | MS.gene47661:CDS | 20.0% |
| ! | AACAATGAACAGCATTTAAT+TGG | + | chr5.2:75754599-75754618 | MS.gene47661:CDS | 25.0% |
| ! | AATACAAAAACCACAAACAA+AGG | - | chr5.2:75756916-75756935 | None:intergenic | 25.0% |
| ! | ACATCAATTTAAGTGTAGTA+AGG | + | chr5.2:75755951-75755970 | MS.gene47661:CDS | 25.0% |
| ! | ACGAATACAGTGAATATAAA+AGG | + | chr5.2:75755083-75755102 | MS.gene47661:CDS | 25.0% |
| ! | ACTCATAGTTTATTGATAAG+TGG | + | chr5.2:75756748-75756767 | MS.gene47661:intron | 25.0% |
| ! | ATTGAGAATAGTTTATGTAC+TGG | + | chr5.2:75756529-75756548 | MS.gene47661:intron | 25.0% |
| ! | CAACTTGTGTTTAAATACTA+AGG | - | chr5.2:75756799-75756818 | None:intergenic | 25.0% |
| ! | CTCATAGTTTATTGATAAGT+GGG | + | chr5.2:75756749-75756768 | MS.gene47661:intron | 25.0% |
| ! | GATAACTTATGTAGTAGTTT+AGG | + | chr5.2:75756491-75756510 | MS.gene47661:intron | 25.0% |
| ! | TTATGCTTCAACATAATGAT+TGG | + | chr5.2:75755191-75755210 | MS.gene47661:CDS | 25.0% |
| ! | TTCCAACTTAATACAAATCT+TGG | - | chr5.2:75754369-75754388 | None:intergenic | 25.0% |
| ! | TTCCATATCAGTTACTAAAT+GGG | + | chr5.2:75756622-75756641 | MS.gene47661:intron | 25.0% |
| ! | TTTATATCTATGTAGTTGGA+AGG | + | chr5.2:75757324-75757343 | MS.gene47661:intron | 25.0% |
| !!! | AGAAGTATGTTTTAACAAGA+TGG | + | chr5.2:75755764-75755783 | MS.gene47661:CDS | 25.0% |
| !!! | CTACTCTTTTAAGTTTTTCA+TGG | + | chr5.2:75757046-75757065 | MS.gene47661:intron | 25.0% |
| !!! | GATTTGTATTAAGTTGGAAA+AGG | + | chr5.2:75754370-75754389 | MS.gene47661:CDS | 25.0% |
| !!! | TGATTTTGATGAACAACATT+TGG | + | chr5.2:75757232-75757251 | MS.gene47661:intron | 25.0% |
| !!! | TTTAAGTTTTTCATGGTACA+AGG | + | chr5.2:75757053-75757072 | MS.gene47661:intron | 25.0% |
| !!! | TTTTATTTGTCCAAATGTGT+AGG | + | chr5.2:75756180-75756199 | MS.gene47661:intron | 25.0% |
| AACTTAATACAAATCTTGGC+AGG | - | chr5.2:75754365-75754384 | None:intergenic | 30.0% | |
| AATAGATCGGAAAGTCTTAA+TGG | - | chr5.2:75754516-75754535 | None:intergenic | 30.0% | |
| AATCAACATTACTTGGATGT+GGG | + | chr5.2:75754864-75754883 | MS.gene47661:intron | 30.0% | |
| ACATCGAAAAAAAGAGATGA+TGG | + | chr5.2:75754239-75754258 | MS.gene47661:CDS | 30.0% | |
| AGCAGAAAAAGAATTTGAAG+CGG | + | chr5.2:75755396-75755415 | MS.gene47661:CDS | 30.0% | |
| AGCTTGAACTTCTTTGAATT+TGG | - | chr5.2:75755503-75755522 | None:intergenic | 30.0% | |
| ATTCCTCAAAACTCACTTAA+AGG | - | chr5.2:75756985-75757004 | None:intergenic | 30.0% | |
| ATTTAAGAATGCATGTCTCT+TGG | + | chr5.2:75757076-75757095 | MS.gene47661:intron | 30.0% | |
| CAACAGAAAATGATAGAACT+TGG | + | chr5.2:75757148-75757167 | MS.gene47661:CDS | 30.0% | |
| CAATTTAAGTGTAGTAAGGA+TGG | + | chr5.2:75755955-75755974 | MS.gene47661:CDS | 30.0% | |
| CAGCATTTAATTGGAAAAGA+AGG | + | chr5.2:75754608-75754627 | MS.gene47661:CDS | 30.0% | |
| CTATGCAAACACTAATAGAA+AGG | + | chr5.2:75756821-75756840 | MS.gene47661:intron | 30.0% | |
| CTATGTAGAATCATCTATTG+AGG | + | chr5.2:75756246-75756265 | MS.gene47661:CDS | 30.0% | |
| CTTCAAAGTTGTGTTTAATC+AGG | + | chr5.2:75755636-75755655 | MS.gene47661:CDS | 30.0% | |
| CTTCCATATCAGTTACTAAA+TGG | + | chr5.2:75756621-75756640 | MS.gene47661:intron | 30.0% | |
| CTTGTTAAAACATACTTCTC+TGG | - | chr5.2:75755763-75755782 | None:intergenic | 30.0% | |
| GATAACATATGTACTAGTTG+AGG | + | chr5.2:75756469-75756488 | MS.gene47661:intron | 30.0% | |
| GGAGAATACATAATTTCTGA+AGG | - | chr5.2:75756132-75756151 | None:intergenic | 30.0% | |
| TAGTATTCATGATGAAGGTA+TGG | + | chr5.2:75754085-75754104 | MS.gene47661:CDS | 30.0% | |
| TGCCAAGATTTGTATTAAGT+TGG | + | chr5.2:75754364-75754383 | MS.gene47661:CDS | 30.0% | |
| TGTAATCATATAGCACCAAA+AGG | - | chr5.2:75756707-75756726 | None:intergenic | 30.0% | |
| TGTGATAGTATTCATGATGA+AGG | + | chr5.2:75754080-75754099 | MS.gene47661:CDS | 30.0% | |
| TTAAAGGACATCTTCTTTCA+AGG | + | chr5.2:75757182-75757201 | MS.gene47661:CDS | 30.0% | |
| TTAATTGGAAAAGAAGGTGA+TGG | + | chr5.2:75754614-75754633 | MS.gene47661:intron | 30.0% | |
| TTCAAAGGAAATGAAAATCG+TGG | + | chr5.2:75756655-75756674 | MS.gene47661:intron | 30.0% | |
| TTTCTTCTACGACATAGATT+TGG | + | chr5.2:75754685-75754704 | MS.gene47661:intron | 30.0% | |
| ! | AAAAAGTCTTGCATGGATTA+TGG | + | chr5.2:75756598-75756617 | MS.gene47661:intron | 30.0% |
| ! | AAAAGGCATGTCATACTTAT+TGG | - | chr5.2:75754813-75754832 | None:intergenic | 30.0% |
| ! | AACATAATGATTGGTTGAGT+GGG | + | chr5.2:75755200-75755219 | MS.gene47661:CDS | 30.0% |
| ! | AATCCTTTAAGTGAGTTTTG+AGG | + | chr5.2:75756979-75756998 | MS.gene47661:intron | 30.0% |
| ! | AGAGCTACTTATGAGTATTT+TGG | + | chr5.2:75754755-75754774 | MS.gene47661:intron | 30.0% |
| ! | TCATGTAAGGAATGTGTTTT+GGG | + | chr5.2:75754718-75754737 | MS.gene47661:intron | 30.0% |
| ! | TTCATGTAAGGAATGTGTTT+TGG | + | chr5.2:75754717-75754736 | MS.gene47661:intron | 30.0% |
| !! | AATAGTTTATGTACTGGTTG+AGG | + | chr5.2:75756535-75756554 | MS.gene47661:intron | 30.0% |
| !! | AGAGAGTATGCTTTGAAAAA+GGG | + | chr5.2:75754197-75754216 | MS.gene47661:CDS | 30.0% |
| !! | ATCATGTCTTTTTCGCAAAA+TGG | - | chr5.2:75754569-75754588 | None:intergenic | 30.0% |
| !! | TAGAGAGTATGCTTTGAAAA+AGG | + | chr5.2:75754196-75754215 | MS.gene47661:CDS | 30.0% |
| !! | TGTAATGAGCATTGATGTAA+TGG | + | chr5.2:75757386-75757405 | MS.gene47661:CDS | 30.0% |
| !! | TGTATTAAGTTGGAAAAGGA+TGG | + | chr5.2:75754374-75754393 | MS.gene47661:CDS | 30.0% |
| !! | TTTGGTGCTATATGATTACA+TGG | + | chr5.2:75756707-75756726 | MS.gene47661:intron | 30.0% |
| !!! | ACAATTTTTTGTCTTAGGTG+GGG | - | chr5.2:75754342-75754361 | None:intergenic | 30.0% |
| !!! | AGTTTTGAGGAATTGATTTC+TGG | + | chr5.2:75756992-75757011 | MS.gene47661:intron | 30.0% |
| !!! | ATCTCTTTTTTTCGATGTTC+TGG | - | chr5.2:75754237-75754256 | None:intergenic | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+CGG | + | chr5.2:75754204-75754223 | MS.gene47661:CDS | 30.0% |
| !!! | CAACTGGTTTTGAAGATAAA+TGG | + | chr5.2:75755149-75755168 | MS.gene47661:CDS | 30.0% |
| !!! | GACAATTTTTTGTCTTAGGT+GGG | - | chr5.2:75754343-75754362 | None:intergenic | 30.0% |
| !!! | GTAAGAAAATATTTTTGGGC+AGG | + | chr5.2:75755259-75755278 | MS.gene47661:CDS | 30.0% |
| AACATTCACAGCTGAAATCA+TGG | - | chr5.2:75755666-75755685 | None:intergenic | 35.0% | |
| AAGCATAAACTTGTCGATGA+AGG | - | chr5.2:75755179-75755198 | None:intergenic | 35.0% | |
| AATGGAGATGATGTTTATGC+AGG | + | chr5.2:75757124-75757143 | MS.gene47661:CDS | 35.0% | |
| ACACCTACAAATGTAGCAAA+AGG | - | chr5.2:75754830-75754849 | None:intergenic | 35.0% | |
| AGAATCTGAAGATGCAACTA+AGG | + | chr5.2:75755912-75755931 | MS.gene47661:CDS | 35.0% | |
| ATATTGCACTCCTACACATT+TGG | - | chr5.2:75756193-75756212 | None:intergenic | 35.0% | |
| ATGATAGAACTTGGACTAAC+TGG | + | chr5.2:75757157-75757176 | MS.gene47661:CDS | 35.0% | |
| ATGGAGATGATGTTTATGCA+GGG | + | chr5.2:75757125-75757144 | MS.gene47661:CDS | 35.0% | |
| CAAGTGGTAATCTTGTAAAC+TGG | + | chr5.2:75756772-75756791 | MS.gene47661:intron | 35.0% | |
| CAATATTCGATCACAGAGTT+TGG | - | chr5.2:75756888-75756907 | None:intergenic | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | + | chr5.2:75754863-75754882 | MS.gene47661:intron | 35.0% | |
| CACCAAAAGGAAATAAACAC+CGG | - | chr5.2:75756694-75756713 | None:intergenic | 35.0% | |
| CATGGTCAATCAACATTACT+TGG | + | chr5.2:75754857-75754876 | MS.gene47661:intron | 35.0% | |
| GATGACTCAAATCCAAACAA+TGG | + | chr5.2:75756009-75756028 | MS.gene47661:CDS | 35.0% | |
| GATTACATGGTAACAAGTGT+TGG | + | chr5.2:75756720-75756739 | MS.gene47661:intron | 35.0% | |
| GGAAACATATGTACTAGTTC+AGG | + | chr5.2:75756403-75756422 | MS.gene47661:intron | 35.0% | |
| GTCCCATTTAGTAACTGATA+TGG | - | chr5.2:75756627-75756646 | None:intergenic | 35.0% | |
| TAAGGCAAAAAAGTCTTGCA+TGG | + | chr5.2:75756591-75756610 | MS.gene47661:intron | 35.0% | |
| TATGATACACACACAACAAC+TGG | + | chr5.2:75755133-75755152 | MS.gene47661:CDS | 35.0% | |
| TATTGTGACAGACCAATGTA+AGG | + | chr5.2:75754970-75754989 | MS.gene47661:intron | 35.0% | |
| TCCATTGAAAAGCAATTCCA+AGG | + | chr5.2:75755463-75755482 | MS.gene47661:CDS | 35.0% | |
| TTTATTGATAAGTGGGCAAG+TGG | + | chr5.2:75756756-75756775 | MS.gene47661:intron | 35.0% | |
| ! | AATGTGTAGGAGTGCAATAT+TGG | + | chr5.2:75756193-75756212 | MS.gene47661:intron | 35.0% |
| ! | AATTCTTGTTTGCACAAGAG+AGG | + | chr5.2:75754277-75754296 | MS.gene47661:CDS | 35.0% |
| ! | ATCGAAATCAATGATGATGC+AGG | + | chr5.2:75754482-75754501 | MS.gene47661:CDS | 35.0% |
| ! | ATGCCTTTTGCTACATTTGT+AGG | + | chr5.2:75754824-75754843 | MS.gene47661:intron | 35.0% |
| ! | ATTCTTGTTTGCACAAGAGA+GGG | + | chr5.2:75754278-75754297 | MS.gene47661:CDS | 35.0% |
| ! | CAACATAATGATTGGTTGAG+TGG | + | chr5.2:75755199-75755218 | MS.gene47661:CDS | 35.0% |
| ! | CATTTTGTACAGCCTTACAT+TGG | - | chr5.2:75754985-75755004 | None:intergenic | 35.0% |
| ! | CTTTGCTACTTATCATGTGT+TGG | + | chr5.2:75755576-75755595 | MS.gene47661:CDS | 35.0% |
| ! | GCAAGTCCATTTTCTTTGTA+GGG | - | chr5.2:75754448-75754467 | None:intergenic | 35.0% |
| ! | GTAATGTTGATTGACCATGA+TGG | - | chr5.2:75754856-75754875 | None:intergenic | 35.0% |
| ! | TATTGTGTCTCCTTTGTTTG+TGG | + | chr5.2:75756903-75756922 | MS.gene47661:intron | 35.0% |
| ! | TGCAAGTCCATTTTCTTTGT+AGG | - | chr5.2:75754449-75754468 | None:intergenic | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | + | chr5.2:75754705-75754724 | MS.gene47661:intron | 35.0% |
| ! | TGTAATGGAAGAAATCGTGA+AGG | + | chr5.2:75757401-75757420 | MS.gene47661:CDS | 35.0% |
| ! | TGTTCGTTGTTTGAGTTTAG+AGG | + | chr5.2:75755682-75755701 | MS.gene47661:CDS | 35.0% |
| ! | TTGTGTGGCTTTTCAAATCA+TGG | + | chr5.2:75754915-75754934 | MS.gene47661:intron | 35.0% |
| !! | ACCTTGGAATTGCTTTTCAA+TGG | - | chr5.2:75755467-75755486 | None:intergenic | 35.0% |
| !! | ATCGTGAAGGTTCTAAAATC+AGG | + | chr5.2:75757414-75757433 | MS.gene47661:CDS | 35.0% |
| !!! | CAATTTTTTGTCTTAGGTGG+GGG | - | chr5.2:75754341-75754360 | None:intergenic | 35.0% |
| !!! | GCAGGACAATTTTTTGTCTT+AGG | - | chr5.2:75754347-75754366 | None:intergenic | 35.0% |
| !!! | GGACAATTTTTTGTCTTAGG+TGG | - | chr5.2:75754344-75754363 | None:intergenic | 35.0% |
| !!! | TGAAGCGGATTTTAATTCAC+TGG | + | chr5.2:75755411-75755430 | MS.gene47661:CDS | 35.0% |
| AAGACACAGAGTCATTTGTG+TGG | + | chr5.2:75754900-75754919 | MS.gene47661:intron | 40.0% | |
| AGCATGCATGCTTTCTTTGA+TGG | + | chr5.2:75755307-75755326 | MS.gene47661:CDS | 40.0% | |
| AGTTGCATCTTCAGATTCTG+CGG | - | chr5.2:75755911-75755930 | None:intergenic | 40.0% | |
| AGTTGGAAAAGGATGGTTTG+TGG | + | chr5.2:75754381-75754400 | MS.gene47661:CDS | 40.0% | |
| ATCTATGTAGTTGGAAGGAG+AGG | + | chr5.2:75757329-75757348 | MS.gene47661:intron | 40.0% | |
| CAGATAACACATGACAACAC+AGG | - | chr5.2:75755711-75755730 | None:intergenic | 40.0% | |
| CCGATCTATTGTCAACAATG+CGG | + | chr5.2:75754526-75754545 | MS.gene47661:CDS | 40.0% | |
| CCGCATTGTTGACAATAGAT+CGG | - | chr5.2:75754529-75754548 | None:intergenic | 40.0% | |
| CGGGTTAAATGTGAAGATCA+AGG | + | chr5.2:75756054-75756073 | MS.gene47661:CDS | 40.0% | |
| CTATTGTCAACAATGCGGAA+GGG | + | chr5.2:75754531-75754550 | MS.gene47661:CDS | 40.0% | |
| GCAAACAAGAATTGCATAGC+AGG | - | chr5.2:75754270-75754289 | None:intergenic | 40.0% | |
| GCATGCATGCTTTCTTTGAT+GGG | + | chr5.2:75755308-75755327 | MS.gene47661:CDS | 40.0% | |
| GCTTCATTGTATGCTTGGAA+AGG | + | chr5.2:75754937-75754956 | MS.gene47661:intron | 40.0% | |
| GGAAATGAAAATCGTGGTCA+CGG | + | chr5.2:75756661-75756680 | MS.gene47661:intron | 40.0% | |
| TAAAAGGATCAAGTCTGCGA+TGG | + | chr5.2:75755099-75755118 | MS.gene47661:CDS | 40.0% | |
| TACTTATCATGTGTTGGAGG+AGG | + | chr5.2:75755582-75755601 | MS.gene47661:CDS | 40.0% | |
| TATGCCATAAACACCACCTA+TGG | - | chr5.2:75755036-75755055 | None:intergenic | 40.0% | |
| TCAAATCCAAACAATGGTGC+TGG | + | chr5.2:75756015-75756034 | MS.gene47661:CDS | 40.0% | |
| TCATCTATTGAGGTTGTCAG+TGG | + | chr5.2:75756256-75756275 | MS.gene47661:CDS | 40.0% | |
| TCATGGCTTCATTGTATGCT+TGG | + | chr5.2:75754932-75754951 | MS.gene47661:intron | 40.0% | |
| TCTATTGTCAACAATGCGGA+AGG | + | chr5.2:75754530-75754549 | MS.gene47661:CDS | 40.0% | |
| TCTTCACATTTAACCCGCAA+TGG | - | chr5.2:75756051-75756070 | None:intergenic | 40.0% | |
| TGAATTCCAGCACCATTGTT+TGG | - | chr5.2:75756024-75756043 | None:intergenic | 40.0% | |
| TGTAGGGAAGACTAACTCAA+TGG | - | chr5.2:75755008-75755027 | None:intergenic | 40.0% | |
| TGTGTTGTGTTACAGATCTG+AGG | + | chr5.2:75756382-75756401 | MS.gene47661:intron | 40.0% | |
| TTTGTAGGTGTGAACCATCA+TGG | + | chr5.2:75754839-75754858 | MS.gene47661:intron | 40.0% | |
| ! | ATGGGACGAAGTTGTTTCAA+AGG | + | chr5.2:75756640-75756659 | MS.gene47661:intron | 40.0% |
| ! | CTGATGATGATGAAGCATGT+TGG | + | chr5.2:75754120-75754139 | MS.gene47661:CDS | 40.0% |
| ! | CTGTATTCGTTGAGCTTTTC+AGG | - | chr5.2:75755073-75755092 | None:intergenic | 40.0% |
| ! | GTAGGAGTGCAATATTGGAA+TGG | + | chr5.2:75756198-75756217 | MS.gene47661:intron | 40.0% |
| ! | TGCTACTTATCATGTGTTGG+AGG | + | chr5.2:75755579-75755598 | MS.gene47661:CDS | 40.0% |
| ! | TTCTTGTTTGCACAAGAGAG+GGG | + | chr5.2:75754279-75754298 | MS.gene47661:CDS | 40.0% |
| !! | CTTGGACTAACTGGTCTTAA+AGG | + | chr5.2:75757166-75757185 | MS.gene47661:CDS | 40.0% |
| !! | CTTTGAAAAAGGGTTTTCGG+TGG | + | chr5.2:75754207-75754226 | MS.gene47661:CDS | 40.0% |
| !! | GTATGAAGAGCGTCATAGAT+GGG | + | chr5.2:75755225-75755244 | MS.gene47661:CDS | 40.0% |
| !! | TGTATGAAGAGCGTCATAGA+TGG | + | chr5.2:75755224-75755243 | MS.gene47661:CDS | 40.0% |
| AAAATCGTGGTCACGGAGAA+AGG | + | chr5.2:75756668-75756687 | MS.gene47661:intron | 45.0% | |
| AATTGAAGCCACAGATGGAC+AGG | + | chr5.2:75755842-75755861 | MS.gene47661:CDS | 45.0% | |
| ATCTGTGTGTTCACGAGAGA+GGG | + | chr5.2:75755726-75755745 | MS.gene47661:CDS | 45.0% | |
| CAAGCGAAGTAATGACAGAC+AGG | + | chr5.2:75756085-75756104 | MS.gene47661:intron | 45.0% | |
| CATCATCTCCATTTCCTGCA+TGG | - | chr5.2:75757117-75757136 | None:intergenic | 45.0% | |
| CTGGAATTCACAGTCCATTG+CGG | + | chr5.2:75756034-75756053 | MS.gene47661:CDS | 45.0% | |
| CTGTCTGTCATTACTTCGCT+TGG | - | chr5.2:75756087-75756106 | None:intergenic | 45.0% | |
| GACCAGCCCTACAAAGAAAA+TGG | + | chr5.2:75754439-75754458 | MS.gene47661:CDS | 45.0% | |
| GAGAGAATTGAAGCCACAGA+TGG | + | chr5.2:75755837-75755856 | MS.gene47661:CDS | 45.0% | |
| TATCTGTGTGTTCACGAGAG+AGG | + | chr5.2:75755725-75755744 | MS.gene47661:CDS | 45.0% | |
| TCGCGCTATTCACTTATACG+TGG | + | chr5.2:75757359-75757378 | MS.gene47661:CDS | 45.0% | |
| TCTATTGAGGTTGTCAGTGG+TGG | + | chr5.2:75756259-75756278 | MS.gene47661:CDS | 45.0% | |
| TGGAATTCACAGTCCATTGC+GGG | + | chr5.2:75756035-75756054 | MS.gene47661:CDS | 45.0% | |
| TTGTCAAACCTGTCCATCTG+TGG | - | chr5.2:75755853-75755872 | None:intergenic | 45.0% | |
| ! | GGCCGGTGTTTATTTCCTTT+TGG | + | chr5.2:75756689-75756708 | MS.gene47661:intron | 45.0% |
| ! | GTCCATTTTCTTTGTAGGGC+TGG | - | chr5.2:75754444-75754463 | None:intergenic | 45.0% |
| ! | TCAATGATGATGCAGGAGTG+AGG | + | chr5.2:75754489-75754508 | MS.gene47661:CDS | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr5.2:75754619-75754638 | MS.gene47661:intron | 45.0% |
| !! | CGAGGGAGCACAATTCATTT+TGG | - | chr5.2:75755536-75755555 | None:intergenic | 45.0% |
| ACCACCTATGGCGTGTTGTA+GGG | - | chr5.2:75755024-75755043 | None:intergenic | 50.0% | |
| ACCCTCGACAACATTCAACG+AGG | - | chr5.2:75755554-75755573 | None:intergenic | 50.0% | |
| AGCATGTTGGAAGCCTGCAA+CGG | + | chr5.2:75754133-75754152 | MS.gene47661:CDS | 50.0% | |
| AGGATCAAGTCTGCGATGGA+AGG | + | chr5.2:75755103-75755122 | MS.gene47661:CDS | 50.0% | |
| ATTGAGGTTGTCAGTGGTGG+TGG | + | chr5.2:75756262-75756281 | MS.gene47661:CDS | 50.0% | |
| CACGCCATAGGTGGTGTTTA+TGG | + | chr5.2:75755029-75755048 | MS.gene47661:CDS | 50.0% | |
| CCCTCGACAACATTCAACGA+GGG | - | chr5.2:75755553-75755572 | None:intergenic | 50.0% | |
| CCCTCGTTGAATGTTGTCGA+GGG | + | chr5.2:75755550-75755569 | MS.gene47661:CDS | 50.0% | |
| CTACGTCTTCGACTGCAAAG+TGG | - | chr5.2:75756855-75756874 | None:intergenic | 50.0% | |
| GGTCTGTCACAATACCCACA+GGG | - | chr5.2:75754964-75754983 | None:intergenic | 50.0% | |
| GTCTGTCACAATACCCACAG+GGG | - | chr5.2:75754963-75754982 | None:intergenic | 50.0% | |
| GTGTTGGAGGAGGTTGTAGT+TGG | + | chr5.2:75755592-75755611 | MS.gene47661:CDS | 50.0% | |
| TCCATTTCCTGCATGGACCA+TGG | - | chr5.2:75757110-75757129 | None:intergenic | 50.0% | |
| TCCCTCGTTGAATGTTGTCG+AGG | + | chr5.2:75755549-75755568 | MS.gene47661:CDS | 50.0% | |
| TCTTCCCTACAACACGCCAT+AGG | + | chr5.2:75755017-75755036 | MS.gene47661:CDS | 50.0% | |
| TCTTCTTTCAAGGCGTGCAG+TGG | + | chr5.2:75757192-75757211 | MS.gene47661:CDS | 50.0% | |
| TGGCATGAGTGTACTCACCT+TGG | - | chr5.2:75755483-75755502 | None:intergenic | 50.0% | |
| TGGTCTGTCACAATACCCAC+AGG | - | chr5.2:75754965-75754984 | None:intergenic | 50.0% | |
| TTGGAGGAGGTTGTAGTTGG+AGG | + | chr5.2:75755595-75755614 | MS.gene47661:CDS | 50.0% | |
| !! | GGGGGTGTCTTTAACGTACA+CGG | - | chr5.2:75754323-75754342 | None:intergenic | 50.0% |
| !! | TGTCAGTGGTGGTGGTTTGT+TGG | + | chr5.2:75756270-75756289 | MS.gene47661:intron | 50.0% |
| ATGCTTGGAAAGGCCCCTGT+GGG | + | chr5.2:75754947-75754966 | MS.gene47661:intron | 55.0% | |
| CACCACCTATGGCGTGTTGT+AGG | - | chr5.2:75755025-75755044 | None:intergenic | 55.0% | |
| CATGTTGGAAGCCTGCAACG+GGG | + | chr5.2:75754135-75754154 | MS.gene47661:CDS | 55.0% | |
| GAAAAACGCATCCCCGTTGC+AGG | - | chr5.2:75754149-75754168 | None:intergenic | 55.0% | |
| GCACAAGAGAGGGGTCTCAA+GGG | + | chr5.2:75754288-75754307 | MS.gene47661:CDS | 55.0% | |
| GCATGTTGGAAGCCTGCAAC+GGG | + | chr5.2:75754134-75754153 | MS.gene47661:CDS | 55.0% | |
| GCCATGGTCCATGCAGGAAA+TGG | + | chr5.2:75757106-75757125 | MS.gene47661:intron | 55.0% | |
| TATGCTTGGAAAGGCCCCTG+TGG | + | chr5.2:75754946-75754965 | MS.gene47661:intron | 55.0% | |
| TCCCTACAACACGCCATAGG+TGG | + | chr5.2:75755020-75755039 | MS.gene47661:CDS | 55.0% | |
| TCCTGCATGGACCATGGCTA+AGG | - | chr5.2:75757104-75757123 | None:intergenic | 55.0% | |
| TGCACAAGAGAGGGGTCTCA+AGG | + | chr5.2:75754287-75754306 | MS.gene47661:CDS | 55.0% | |
| !! | GTCTCTTGGTGCCTTAGCCA+TGG | + | chr5.2:75757090-75757109 | MS.gene47661:intron | 55.0% |
| GCCTTAGCCATGGTCCATGC+AGG | + | chr5.2:75757100-75757119 | MS.gene47661:intron | 60.0% | |
| TCGTGGTCACGGAGAAAGGC+CGG | + | chr5.2:75756672-75756691 | MS.gene47661:intron | 60.0% | |
| ! | CTTGGATGTGGGCTGCTCTC+AGG | + | chr5.2:75754875-75754894 | MS.gene47661:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 75754053 | 75757449 | 75754053 | ID=MS.gene47661 |
| chr5.2 | mRNA | 75754053 | 75757449 | 75754053 | ID=MS.gene47661.t1;Parent=MS.gene47661 |
| chr5.2 | exon | 75754053 | 75754629 | 75754053 | ID=MS.gene47661.t1.exon1;Parent=MS.gene47661.t1 |
| chr5.2 | CDS | 75754053 | 75754629 | 75754053 | ID=cds.MS.gene47661.t1;Parent=MS.gene47661.t1 |
| chr5.2 | exon | 75754981 | 75756092 | 75754981 | ID=MS.gene47661.t1.exon2;Parent=MS.gene47661.t1 |
| chr5.2 | CDS | 75754981 | 75756092 | 75754981 | ID=cds.MS.gene47661.t1;Parent=MS.gene47661.t1 |
| chr5.2 | exon | 75756202 | 75756283 | 75756202 | ID=MS.gene47661.t1.exon3;Parent=MS.gene47661.t1 |
| chr5.2 | CDS | 75756202 | 75756283 | 75756202 | ID=cds.MS.gene47661.t1;Parent=MS.gene47661.t1 |
| chr5.2 | exon | 75757107 | 75757213 | 75757107 | ID=MS.gene47661.t1.exon4;Parent=MS.gene47661.t1 |
| chr5.2 | CDS | 75757107 | 75757213 | 75757107 | ID=cds.MS.gene47661.t1;Parent=MS.gene47661.t1 |
| chr5.2 | exon | 75757339 | 75757449 | 75757339 | ID=MS.gene47661.t1.exon5;Parent=MS.gene47661.t1 |
| chr5.2 | CDS | 75757339 | 75757449 | 75757339 | ID=cds.MS.gene47661.t1;Parent=MS.gene47661.t1 |
| Gene Sequence |
| Protein sequence |
