Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53056.t1 | XP_003613849.1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 4.00E-140 | 507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53056.t1 | Q9LDR9 | 84.3 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 5.9e-124 | 444.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53056.t1 | G7KGP1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 2.9e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene53056 | 0.807208 | 5.66E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene53056 | 0.844899 | 5.68E-59 | -1.69E-46 |
| MS.gene049491 | MS.gene53056 | 0.808718 | 2.70E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene53056 | 0.863269 | 2.81E-64 | -1.69E-46 |
| MS.gene050076 | MS.gene53056 | 0.818195 | 2.23E-52 | -1.69E-46 |
| MS.gene050099 | MS.gene53056 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene53056 | 0.803714 | 3.06E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene53056 | 0.827618 | 1.42E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene53056 | 0.805777 | 1.13E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene53056 | -0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene53056 | 0.812556 | 4.00E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene53056 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene051471 | MS.gene53056 | 0.85087 | 1.28E-60 | -1.69E-46 |
| MS.gene051535 | MS.gene53056 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene53056 | 0.896884 | 2.40E-76 | -1.69E-46 |
| MS.gene051663 | MS.gene53056 | 0.867962 | 9.29E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene53056 | 0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene53056 | 0.832123 | 1.13E-55 | -1.69E-46 |
| MS.gene052302 | MS.gene53056 | 0.801317 | 9.53E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene53056 | -0.814185 | 1.75E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene53056 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene53056 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene53056 | 0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene53056 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene053559 | MS.gene53056 | 0.829559 | 4.81E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene53056 | 0.876012 | 1.96E-68 | -1.69E-46 |
| MS.gene053907 | MS.gene53056 | 0.830291 | 3.19E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene53056 | 0.806004 | 1.02E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene53056 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene53056 | 0.808778 | 2.62E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene53056 | 0.852917 | 3.37E-61 | -1.69E-46 |
| MS.gene055277 | MS.gene53056 | 0.826368 | 2.82E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene53056 | 0.814222 | 1.72E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene53056 | 0.855814 | 4.90E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene53056 | 0.852475 | 4.50E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene53056 | 0.811323 | 7.41E-51 | -1.69E-46 |
| MS.gene056314 | MS.gene53056 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene53056 | 0.836536 | 8.84E-57 | -1.69E-46 |
| MS.gene056875 | MS.gene53056 | 0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene53056 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene53056 | 0.810623 | 1.05E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene53056 | 0.811322 | 7.42E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene53056 | 0.849232 | 3.69E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene53056 | 0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene53056 | 0.809119 | 2.22E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene53056 | 0.833567 | 4.95E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene53056 | 0.819204 | 1.31E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene53056 | 0.802804 | 4.71E-49 | -1.69E-46 |
| MS.gene058201 | MS.gene53056 | 0.815684 | 8.15E-52 | -1.69E-46 |
| MS.gene058661 | MS.gene53056 | -0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene53056 | 0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene53056 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene53056 | 0.823701 | 1.20E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene53056 | 0.817689 | 2.90E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene53056 | 0.851118 | 1.09E-60 | -1.69E-46 |
| MS.gene059708 | MS.gene53056 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene53056 | 0.818208 | 2.21E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene53056 | 0.875383 | 3.22E-68 | -1.69E-46 |
| MS.gene059899 | MS.gene53056 | 0.847975 | 8.23E-60 | -1.69E-46 |
| MS.gene060084 | MS.gene53056 | 0.808497 | 3.01E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene53056 | 0.813758 | 2.18E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene53056 | 0.850293 | 1.86E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene53056 | 0.838635 | 2.56E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene53056 | 0.851651 | 7.73E-61 | -1.69E-46 |
| MS.gene061113 | MS.gene53056 | 0.837737 | 4.36E-57 | -1.69E-46 |
| MS.gene061265 | MS.gene53056 | 0.855696 | 5.30E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53056 | MS.gene24107 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53056.t1 | MTR_5g041700 | 97.581 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 0.0 | 496 |
| MS.gene53056.t1 | MTR_4g081950 | 87.045 | 247 | 32 | 0 | 1 | 247 | 37 | 283 | 3.56e-164 | 455 |
| MS.gene53056.t1 | MTR_3g094040 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.06e-146 | 410 |
| MS.gene53056.t1 | MTR_3g094060 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.47e-146 | 409 |
| MS.gene53056.t1 | MTR_3g435430 | 80.769 | 234 | 45 | 0 | 14 | 247 | 14 | 247 | 1.15e-145 | 407 |
| MS.gene53056.t1 | MTR_5g075320 | 73.984 | 246 | 63 | 1 | 3 | 247 | 6 | 251 | 4.17e-139 | 390 |
| MS.gene53056.t1 | MTR_7g011060 | 76.305 | 249 | 48 | 3 | 1 | 247 | 1 | 240 | 2.34e-136 | 383 |
| MS.gene53056.t1 | MTR_3g466760 | 75.709 | 247 | 60 | 0 | 1 | 247 | 14 | 260 | 2.55e-133 | 376 |
| MS.gene53056.t1 | MTR_3g466790 | 75.304 | 247 | 61 | 0 | 1 | 247 | 8 | 254 | 8.28e-133 | 375 |
| MS.gene53056.t1 | MTR_5g079950 | 74.236 | 229 | 57 | 1 | 22 | 248 | 30 | 258 | 2.91e-126 | 358 |
| MS.gene53056.t1 | MTR_2g097030 | 66.795 | 259 | 75 | 2 | 1 | 248 | 1 | 259 | 8.43e-126 | 357 |
| MS.gene53056.t1 | MTR_7g061720 | 74.672 | 229 | 56 | 1 | 22 | 248 | 29 | 257 | 1.42e-125 | 357 |
| MS.gene53056.t1 | MTR_6g012520 | 75.200 | 250 | 51 | 3 | 1 | 247 | 1 | 242 | 5.26e-123 | 350 |
| MS.gene53056.t1 | MTR_4g063975 | 72.489 | 229 | 61 | 1 | 22 | 248 | 29 | 257 | 1.36e-117 | 337 |
| MS.gene53056.t1 | MTR_1g026020 | 65.919 | 223 | 73 | 2 | 24 | 243 | 28 | 250 | 1.61e-111 | 321 |
| MS.gene53056.t1 | MTR_1g085460 | 65.315 | 222 | 73 | 3 | 25 | 242 | 30 | 251 | 3.03e-105 | 305 |
| MS.gene53056.t1 | MTR_7g111010 | 59.761 | 251 | 95 | 5 | 3 | 247 | 4 | 254 | 1.16e-104 | 303 |
| MS.gene53056.t1 | MTR_7g110990 | 64.474 | 228 | 76 | 4 | 25 | 247 | 12 | 239 | 7.30e-104 | 301 |
| MS.gene53056.t1 | MTR_7g013150 | 57.322 | 239 | 98 | 2 | 6 | 242 | 11 | 247 | 3.44e-97 | 285 |
| MS.gene53056.t1 | MTR_4g124340 | 58.667 | 225 | 88 | 3 | 23 | 244 | 59 | 281 | 7.18e-97 | 285 |
| MS.gene53056.t1 | MTR_7g013120 | 54.839 | 248 | 107 | 3 | 2 | 246 | 6 | 251 | 4.69e-95 | 279 |
| MS.gene53056.t1 | MTR_7g013140 | 57.500 | 240 | 96 | 3 | 7 | 244 | 12 | 247 | 1.37e-94 | 278 |
| MS.gene53056.t1 | MTR_8g058990 | 55.870 | 247 | 104 | 3 | 2 | 245 | 6 | 250 | 1.53e-92 | 273 |
| MS.gene53056.t1 | MTR_8g464350 | 54.098 | 244 | 108 | 2 | 1 | 242 | 7 | 248 | 1.14e-91 | 271 |
| MS.gene53056.t1 | MTR_5g076950 | 56.696 | 224 | 96 | 1 | 25 | 247 | 41 | 264 | 3.31e-90 | 267 |
| MS.gene53056.t1 | MTR_5g011210 | 57.658 | 222 | 90 | 3 | 25 | 243 | 37 | 257 | 6.80e-89 | 264 |
| MS.gene53056.t1 | MTR_0040s0140 | 48.996 | 249 | 125 | 1 | 1 | 247 | 8 | 256 | 7.74e-87 | 258 |
| MS.gene53056.t1 | MTR_4g102450 | 55.605 | 223 | 93 | 4 | 25 | 243 | 36 | 256 | 4.05e-84 | 252 |
| MS.gene53056.t1 | MTR_2g090255 | 48.163 | 245 | 124 | 2 | 6 | 247 | 8 | 252 | 4.84e-84 | 251 |
| MS.gene53056.t1 | MTR_3g064510 | 52.790 | 233 | 101 | 5 | 25 | 248 | 53 | 285 | 6.11e-81 | 244 |
| MS.gene53056.t1 | MTR_6g012500 | 70.000 | 120 | 30 | 1 | 134 | 247 | 161 | 280 | 3.43e-53 | 173 |
| MS.gene53056.t1 | MTR_0008s0120 | 38.618 | 246 | 92 | 4 | 3 | 245 | 7 | 196 | 3.37e-46 | 153 |
| MS.gene53056.t1 | MTR_2g090270 | 31.197 | 234 | 131 | 9 | 25 | 243 | 35 | 253 | 1.77e-25 | 101 |
| MS.gene53056.t1 | MTR_2g090265 | 29.845 | 258 | 151 | 10 | 1 | 243 | 9 | 251 | 5.19e-25 | 99.8 |
| MS.gene53056.t1 | MTR_0118s0070 | 32.314 | 229 | 127 | 10 | 30 | 242 | 53 | 269 | 1.32e-24 | 99.0 |
| MS.gene53056.t1 | MTR_0122s0020 | 31.169 | 231 | 135 | 9 | 25 | 243 | 41 | 259 | 1.38e-23 | 96.3 |
| MS.gene53056.t1 | MTR_0809s0010 | 30.769 | 234 | 130 | 11 | 25 | 242 | 47 | 264 | 8.20e-22 | 91.7 |
| MS.gene53056.t1 | MTR_4g028640 | 31.197 | 234 | 128 | 11 | 25 | 242 | 42 | 258 | 2.40e-21 | 90.1 |
| MS.gene53056.t1 | MTR_5g013440 | 27.801 | 241 | 156 | 9 | 9 | 242 | 16 | 245 | 7.72e-18 | 80.5 |
| MS.gene53056.t1 | MTR_4g099370 | 28.761 | 226 | 144 | 9 | 25 | 242 | 28 | 244 | 6.01e-17 | 78.2 |
| MS.gene53056.t1 | MTR_0122s0020 | 32.386 | 176 | 96 | 8 | 25 | 189 | 41 | 204 | 1.71e-15 | 73.2 |
| MS.gene53056.t1 | MTR_4g075790 | 28.829 | 222 | 127 | 9 | 36 | 242 | 32 | 237 | 2.62e-15 | 73.6 |
| MS.gene53056.t1 | MTR_1g085365 | 55.357 | 56 | 25 | 0 | 192 | 247 | 4 | 59 | 3.13e-15 | 68.6 |
| MS.gene53056.t1 | MTR_4g098930 | 27.660 | 235 | 136 | 10 | 25 | 242 | 29 | 246 | 2.97e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53056.t1 | AT2G03090 | 83.065 | 248 | 42 | 0 | 1 | 248 | 6 | 253 | 3.30e-155 | 431 |
| MS.gene53056.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene53056.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene53056.t1 | AT1G69530 | 81.600 | 250 | 44 | 2 | 1 | 248 | 1 | 250 | 3.08e-150 | 420 |
| MS.gene53056.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 6.35e-146 | 408 |
| MS.gene53056.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 11 | 259 | 7.53e-146 | 408 |
| MS.gene53056.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene53056.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene53056.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 1.88e-138 | 391 |
| MS.gene53056.t1 | AT2G40610 | 70.850 | 247 | 68 | 2 | 2 | 247 | 10 | 253 | 5.23e-133 | 375 |
| MS.gene53056.t1 | AT2G39700 | 75.983 | 229 | 53 | 1 | 22 | 248 | 28 | 256 | 2.59e-129 | 366 |
| MS.gene53056.t1 | AT1G69530 | 73.600 | 250 | 34 | 3 | 1 | 248 | 1 | 220 | 4.94e-128 | 362 |
| MS.gene53056.t1 | AT1G69530 | 77.729 | 229 | 47 | 3 | 1 | 227 | 1 | 227 | 3.57e-127 | 360 |
| MS.gene53056.t1 | AT5G02260 | 74.236 | 229 | 57 | 1 | 22 | 248 | 29 | 257 | 8.44e-127 | 360 |
| MS.gene53056.t1 | AT3G55500 | 67.717 | 254 | 76 | 2 | 1 | 248 | 6 | 259 | 5.95e-126 | 358 |
| MS.gene53056.t1 | AT5G05290 | 72.124 | 226 | 62 | 1 | 23 | 247 | 30 | 255 | 2.73e-125 | 356 |
| MS.gene53056.t1 | AT2G37640 | 73.362 | 229 | 59 | 1 | 22 | 248 | 33 | 261 | 3.15e-124 | 353 |
| MS.gene53056.t1 | AT3G29030 | 74.222 | 225 | 49 | 2 | 25 | 248 | 38 | 254 | 2.07e-121 | 346 |
| MS.gene53056.t1 | AT2G28950 | 67.578 | 256 | 75 | 2 | 1 | 248 | 1 | 256 | 5.63e-121 | 345 |
| MS.gene53056.t1 | AT1G20190 | 67.713 | 223 | 69 | 2 | 24 | 243 | 25 | 247 | 5.58e-111 | 320 |
| MS.gene53056.t1 | AT2G37640 | 71.292 | 209 | 58 | 1 | 42 | 248 | 28 | 236 | 3.00e-110 | 317 |
| MS.gene53056.t1 | AT4G01630 | 62.810 | 242 | 85 | 4 | 6 | 242 | 8 | 249 | 7.95e-107 | 309 |
| MS.gene53056.t1 | AT5G39280 | 55.702 | 228 | 99 | 1 | 17 | 244 | 46 | 271 | 2.05e-94 | 278 |
| MS.gene53056.t1 | AT5G39300 | 55.459 | 229 | 100 | 1 | 16 | 244 | 46 | 272 | 4.13e-94 | 278 |
| MS.gene53056.t1 | AT5G39270 | 57.273 | 220 | 92 | 1 | 25 | 244 | 58 | 275 | 2.19e-92 | 273 |
| MS.gene53056.t1 | AT5G39290 | 56.364 | 220 | 94 | 1 | 25 | 244 | 58 | 275 | 1.10e-91 | 271 |
| MS.gene53056.t1 | AT1G20190 | 64.706 | 187 | 63 | 2 | 60 | 243 | 2 | 188 | 9.57e-89 | 261 |
| MS.gene53056.t1 | AT1G12560 | 53.785 | 251 | 110 | 5 | 3 | 248 | 13 | 262 | 3.86e-88 | 262 |
| MS.gene53056.t1 | AT1G62980 | 53.061 | 245 | 108 | 4 | 1 | 242 | 10 | 250 | 3.01e-87 | 259 |
| MS.gene53056.t1 | AT5G39310 | 55.405 | 222 | 96 | 2 | 24 | 244 | 89 | 308 | 3.12e-87 | 261 |
| MS.gene53056.t1 | AT3G03220 | 53.778 | 225 | 103 | 1 | 25 | 248 | 40 | 264 | 8.19e-86 | 256 |
| MS.gene53056.t1 | AT3G15370 | 52.400 | 250 | 104 | 7 | 8 | 247 | 7 | 251 | 3.27e-84 | 251 |
| MS.gene53056.t1 | AT5G39260 | 52.212 | 226 | 100 | 2 | 20 | 244 | 40 | 258 | 9.80e-79 | 238 |
| MS.gene53056.t1 | AT4G38210 | 47.967 | 246 | 121 | 3 | 6 | 247 | 12 | 254 | 2.35e-78 | 237 |
| MS.gene53056.t1 | AT3G15370 | 46.786 | 280 | 104 | 8 | 8 | 247 | 7 | 281 | 1.51e-77 | 236 |
| MS.gene53056.t1 | AT4G28250 | 34.764 | 233 | 125 | 10 | 25 | 243 | 36 | 255 | 2.23e-28 | 108 |
| MS.gene53056.t1 | AT2G20750 | 32.189 | 233 | 134 | 9 | 25 | 243 | 40 | 262 | 1.88e-25 | 101 |
| MS.gene53056.t1 | AT4G28250 | 33.621 | 232 | 123 | 10 | 25 | 243 | 36 | 249 | 1.40e-24 | 98.6 |
| MS.gene53056.t1 | AT1G65680 | 30.864 | 243 | 141 | 10 | 15 | 242 | 37 | 267 | 2.99e-23 | 95.5 |
| MS.gene53056.t1 | AT1G65681 | 30.876 | 217 | 125 | 9 | 39 | 242 | 12 | 216 | 2.35e-19 | 84.0 |
| MS.gene53056.t1 | AT2G20750 | 31.792 | 173 | 98 | 6 | 25 | 186 | 40 | 203 | 9.66e-18 | 79.7 |
| MS.gene53056.t1 | AT4G17030 | 29.084 | 251 | 149 | 9 | 6 | 242 | 8 | 243 | 1.03e-17 | 80.1 |
| MS.gene53056.t1 | AT2G45110 | 28.814 | 236 | 129 | 9 | 28 | 242 | 36 | 253 | 2.08e-17 | 79.3 |
| MS.gene53056.t1 | AT4G28250 | 33.143 | 175 | 90 | 7 | 25 | 189 | 36 | 193 | 1.07e-16 | 76.6 |
| MS.gene53056.t1 | AT4G28250 | 33.721 | 172 | 87 | 7 | 25 | 186 | 36 | 190 | 2.60e-16 | 75.5 |
| MS.gene53056.t1 | AT3G60570 | 25.984 | 254 | 156 | 9 | 8 | 242 | 11 | 251 | 1.73e-15 | 74.3 |
| MS.gene53056.t1 | AT3G45970 | 26.415 | 212 | 134 | 9 | 43 | 242 | 14 | 215 | 1.70e-14 | 71.2 |
| MS.gene53056.t1 | AT3G45960 | 29.126 | 206 | 125 | 9 | 48 | 242 | 46 | 241 | 1.83e-13 | 68.6 |
| MS.gene53056.t1 | AT4G38400 | 26.699 | 206 | 130 | 8 | 48 | 242 | 47 | 242 | 5.02e-12 | 64.7 |
| MS.gene53056.t1 | AT3G45970 | 25.604 | 207 | 132 | 9 | 48 | 242 | 46 | 242 | 7.12e-12 | 63.9 |
Find 73 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCCAGCTGGTTGGTCTTT+TGG | 0.178373 | 5.4:-30611336 | MS.gene53056:CDS |
| CAAAGCAACAATTATCTTAA+TGG | 0.193864 | 5.4:-30611420 | MS.gene53056:CDS |
| GGATGCCAATGTCTAGAAAT+TGG | 0.241916 | 5.4:-30611455 | MS.gene53056:CDS |
| AATGCACATGCAACTTTCTA+TGG | 0.254508 | 5.4:-30612700 | MS.gene53056:CDS |
| TCTCATTGGGTTGTTCTTCA+TGG | 0.255156 | 5.4:-30612773 | MS.gene53056:CDS |
| GTGTCTTCCTGGCTCTATTT+TGG | 0.260571 | 5.4:-30612405 | MS.gene53056:CDS |
| CTAGAAATTGGGGTCAAAAT+TGG | 0.289763 | 5.4:-30611443 | MS.gene53056:CDS |
| GTACATTCAGTAGCTATTAA+AGG | 0.297161 | 5.4:-30611492 | MS.gene53056:CDS |
| TTAGGTGGTGCATGTGGATA+TGG | 0.304849 | 5.4:-30612545 | MS.gene53056:intron |
| GCAGAAGAAGGGGAGGAATT+AGG | 0.323849 | 5.4:-30611581 | MS.gene53056:CDS |
| GTGGTTCTTGCTTTGAGATT+AGG | 0.333003 | 5.4:-30612448 | MS.gene53056:CDS |
| GACCGTAAATGGTGTCTTCC+TGG | 0.357239 | 5.4:-30612416 | MS.gene53056:CDS |
| CACCATCCTCCATTGTTATT+AGG | 0.369879 | 5.4:+30612344 | None:intergenic |
| GCTATTAAAGGGTCAAGAAC+AGG | 0.379089 | 5.4:-30611480 | MS.gene53056:CDS |
| TTCCATAACCTTGACTGTAT+AGG | 0.380723 | 5.4:+30612519 | None:intergenic |
| TGGCCAAGCTTTGTCTTTCA+AGG | 0.384678 | 5.4:-30611400 | MS.gene53056:CDS |
| GATGCCAATGTCTAGAAATT+GGG | 0.384818 | 5.4:-30611454 | MS.gene53056:CDS |
| AGCCAGGAAGACACCATTTA+CGG | 0.387805 | 5.4:+30612414 | None:intergenic |
| TGCTTTGAGATTAGGTGTGC+TGG | 0.396638 | 5.4:-30612440 | MS.gene53056:CDS |
| AATTCCTCCCCTTCTTCTGC+AGG | 0.397486 | 5.4:+30611584 | None:intergenic |
| ACCAGCTGGGGCAGCATTGT+TGG | 0.398932 | 5.4:+30611347 | None:intergenic |
| TTATTAGGCAAGGCATTGTT+TGG | 0.406087 | 5.4:+30612359 | None:intergenic |
| ATTTACCTTCTGTAAGAAAC+AGG | 0.410554 | 5.4:+30612245 | None:intergenic |
| TATGGTGTGTCTAACGGAAT+TGG | 0.414245 | 5.4:+30611295 | None:intergenic |
| GGTGTGCTGGTGACCGTAAA+TGG | 0.417502 | 5.4:-30612427 | MS.gene53056:CDS |
| AACCTATACAGTCAAGGTTA+TGG | 0.427075 | 5.4:-30612521 | MS.gene53056:CDS |
| CTTATGGTTATGGTGGAGGA+TGG | 0.431228 | 5.4:-30612726 | MS.gene53056:CDS |
| GTAACAAATGTGGGTGGTGC+TGG | 0.440862 | 5.4:-30611519 | MS.gene53056:CDS |
| TACATTCAGTAGCTATTAAA+GGG | 0.441653 | 5.4:-30611491 | MS.gene53056:CDS |
| GGAATTAGGTTCACAATCAA+TGG | 0.459198 | 5.4:-30611567 | MS.gene53056:CDS |
| ACAATGCTGCCCCAGCTGGT+TGG | 0.464148 | 5.4:-30611344 | MS.gene53056:CDS |
| TCCAACAATGCTGCCCCAGC+TGG | 0.465999 | 5.4:-30611348 | MS.gene53056:CDS |
| TAACCTTGAAAGACAAAGCT+TGG | 0.500681 | 5.4:+30611397 | None:intergenic |
| TCTGCTTATGGTTATGGTGG+AGG | 0.502421 | 5.4:-30612730 | MS.gene53056:CDS |
| TTGTTCCTGTTTCTTACAGA+AGG | 0.505585 | 5.4:-30612250 | MS.gene53056:intron |
| TCCTCCATTGTTATTAGGCA+AGG | 0.509324 | 5.4:+30612349 | None:intergenic |
| AGTGATGCATCAGGAACAAT+GGG | 0.509766 | 5.4:-30612673 | MS.gene53056:intron |
| ATGGTGTGTCTAACGGAATT+GGG | 0.514181 | 5.4:+30611296 | None:intergenic |
| GTAGGGTACCCTGCAGAAGA+AGG | 0.516806 | 5.4:-30611593 | MS.gene53056:intron |
| TGACCCCAATTTCTAGACAT+TGG | 0.519449 | 5.4:+30611450 | None:intergenic |
| TATGGAGGAAGTGATGCATC+AGG | 0.519711 | 5.4:-30612682 | MS.gene53056:CDS |
| TGACCAAAAGACCAACCAGC+TGG | 0.520912 | 5.4:+30611333 | None:intergenic |
| TCATCTGCTTATGGTTATGG+TGG | 0.521601 | 5.4:-30612733 | MS.gene53056:CDS |
| TTCAACAGTGGTTTGAGCTG+TGG | 0.522814 | 5.4:-30612467 | MS.gene53056:CDS |
| AGAATTGCTCAATACAAAGC+TGG | 0.532239 | 5.4:-30612275 | MS.gene53056:CDS |
| TTATGGTTATGGTGGAGGAT+GGG | 0.534886 | 5.4:-30612725 | MS.gene53056:CDS |
| TTAGGCAAGGCATTGTTTGG+TGG | 0.537849 | 5.4:+30612362 | None:intergenic |
| AGATCAAAGTGTTGCAAAGG+AGG | 0.543969 | 5.4:+30612317 | None:intergenic |
| TTCAAGGTTACAACAAGTGA+TGG | 0.544265 | 5.4:-30611384 | MS.gene53056:CDS |
| GACCAAAAGACCAACCAGCT+GGG | 0.545554 | 5.4:+30611334 | None:intergenic |
| GCAGTGACCAAAATAGAGCC+AGG | 0.547622 | 5.4:+30612398 | None:intergenic |
| ATTCCTCCCCTTCTTCTGCA+GGG | 0.548478 | 5.4:+30611585 | None:intergenic |
| TACTAGAACTAAGTTGAAGT+AGG | 0.551749 | 5.4:+30611539 | None:intergenic |
| TAGGGTACCCTGCAGAAGAA+GGG | 0.557129 | 5.4:-30611592 | MS.gene53056:CDS |
| ACGGAATTGGGCACCAGTGT+AGG | 0.562519 | 5.4:+30611308 | None:intergenic |
| AAGTGATGCATCAGGAACAA+TGG | 0.564601 | 5.4:-30612674 | MS.gene53056:CDS |
| CTTAGTTCTAGTAACAAATG+TGG | 0.570683 | 5.4:-30611529 | MS.gene53056:CDS |
| GATCAAAGTGTTGCAAAGGA+GGG | 0.592393 | 5.4:+30612318 | None:intergenic |
| GCAAGATCAAAGTGTTGCAA+AGG | 0.592711 | 5.4:+30612314 | None:intergenic |
| TTAGTTCTAGTAACAAATGT+GGG | 0.599321 | 5.4:-30611528 | MS.gene53056:CDS |
| AATGCCTTGCCTAATAACAA+TGG | 0.606510 | 5.4:-30612353 | MS.gene53056:CDS |
| CTATTAAAGGGTCAAGAACA+GGG | 0.615693 | 5.4:-30611479 | MS.gene53056:CDS |
| ATGCCAATGTCTAGAAATTG+GGG | 0.621765 | 5.4:-30611453 | MS.gene53056:CDS |
| AGGGTACCCTGCAGAAGAAG+GGG | 0.622412 | 5.4:-30611591 | MS.gene53056:CDS |
| ACCAAAAGACCAACCAGCTG+GGG | 0.625454 | 5.4:+30611335 | None:intergenic |
| AGCACAGCTTTGTTCAACAG+TGG | 0.628810 | 5.4:-30612479 | MS.gene53056:CDS |
| TGCCTAATAACAATGGAGGA+TGG | 0.634087 | 5.4:-30612346 | MS.gene53056:CDS |
| GCACATGCAACTTTCTATGG+AGG | 0.636010 | 5.4:-30612697 | MS.gene53056:CDS |
| GCCTTGCCTAATAACAATGG+AGG | 0.642659 | 5.4:-30612350 | MS.gene53056:CDS |
| TATGGAAACCTATACAGTCA+AGG | 0.647219 | 5.4:-30612527 | MS.gene53056:CDS |
| GTACCCTGCAGAAGAAGGGG+AGG | 0.667861 | 5.4:-30611588 | MS.gene53056:CDS |
| GTTCTAGTAACAAATGTGGG+TGG | 0.696895 | 5.4:-30611525 | MS.gene53056:CDS |
| TTAAAGGGTCAAGAACAGGG+TGG | 0.777410 | 5.4:-30611476 | MS.gene53056:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTATTAAAAAA+AGG | - | chr5.4:30612370-30612389 | MS.gene53056:CDS | 0.0% |
| !!! | ACTAATATTAATTATTGTTT+TGG | + | chr5.4:30612318-30612337 | None:intergenic | 10.0% |
| !!! | TTAATATTGAAATTTTGTTT+AGG | - | chr5.4:30611520-30611539 | MS.gene53056:CDS | 10.0% |
| !!! | TTTAAAATTATTTATTAGAG+AGG | + | chr5.4:30612284-30612303 | None:intergenic | 10.0% |
| !! | TTTATACTATTTAAGCAATT+TGG | - | chr5.4:30611473-30611492 | MS.gene53056:CDS | 15.0% |
| !!! | AATTTTTAATCACATGTATT+TGG | - | chr5.4:30611987-30612006 | MS.gene53056:intron | 15.0% |
| !! | AGTATAAATTACTTACAACT+TGG | + | chr5.4:30612427-30612446 | None:intergenic | 20.0% |
| !! | ATTAAACGTATTAGTCAAAA+GGG | + | chr5.4:30611505-30611524 | None:intergenic | 20.0% |
| !! | TATTAAACGTATTAGTCAAA+AGG | + | chr5.4:30611506-30611525 | None:intergenic | 20.0% |
| !! | TGAGATTAAATTTGTGTAAT+GGG | - | chr5.4:30611900-30611919 | MS.gene53056:intron | 20.0% |
| !! | TTGAGATTAAATTTGTGTAA+TGG | - | chr5.4:30611899-30611918 | MS.gene53056:intron | 20.0% |
| !!! | ATATTGAAATTTTGTTTAGG+TGG | - | chr5.4:30611523-30611542 | MS.gene53056:CDS | 20.0% |
| !!! | GTATTTTTTTCTCTCTAAAT+GGG | - | chr5.4:30612118-30612137 | MS.gene53056:intron | 20.0% |
| !!! | TGTATTTTTTTCTCTCTAAA+TGG | - | chr5.4:30612117-30612136 | MS.gene53056:intron | 20.0% |
| ! | AATGGTACAATTAACATTGA+AGG | + | chr5.4:30612258-30612277 | None:intergenic | 25.0% |
| ! | AGAAGTAATTTATTGTTGTG+TGG | - | chr5.4:30612461-30612480 | MS.gene53056:CDS | 25.0% |
| ! | ATGGTACAATTAACATTGAA+GGG | + | chr5.4:30612257-30612276 | None:intergenic | 25.0% |
| ! | CAAAGCAACAATTATCTTAA+TGG | - | chr5.4:30612663-30612682 | MS.gene53056:intron | 25.0% |
| ! | CTAGCATAAAACAAAAAGTA+GGG | + | chr5.4:30612019-30612038 | None:intergenic | 25.0% |
| ! | TACATTCAGTAGCTATTAAA+GGG | - | chr5.4:30612592-30612611 | MS.gene53056:intron | 25.0% |
| ! | TATTTATTAGAGAGGTGAAA+TGG | + | chr5.4:30612276-30612295 | None:intergenic | 25.0% |
| ! | TCTAGCATAAAACAAAAAGT+AGG | + | chr5.4:30612020-30612039 | None:intergenic | 25.0% |
| ! | TTAAACGTATTAGTCAAAAG+GGG | + | chr5.4:30611504-30611523 | None:intergenic | 25.0% |
| !!! | ATTAAATTTGTGTAATGGGT+TGG | - | chr5.4:30611904-30611923 | MS.gene53056:intron | 25.0% |
| !!! | TTAGTTCTAGTAACAAATGT+GGG | - | chr5.4:30612555-30612574 | MS.gene53056:intron | 25.0% |
| AACTTTATCTAGCTAGTCAA+TGG | - | chr5.4:30612068-30612087 | MS.gene53056:intron | 30.0% | |
| ACTTTATCTAGCTAGTCAAT+GGG | - | chr5.4:30612069-30612088 | MS.gene53056:intron | 30.0% | |
| ATTTACCTTCTGTAAGAAAC+AGG | + | chr5.4:30611841-30611860 | None:intergenic | 30.0% | |
| GTACATTCAGTAGCTATTAA+AGG | - | chr5.4:30612591-30612610 | MS.gene53056:intron | 30.0% | |
| ! | ACTATGTTTTCATCTGCTTA+TGG | - | chr5.4:30611341-30611360 | MS.gene53056:CDS | 30.0% |
| ! | TACTAGAACTAAGTTGAAGT+AGG | + | chr5.4:30612547-30612566 | None:intergenic | 30.0% |
| ! | TGAGCAATTCTAAGAAAAAC+AGG | + | chr5.4:30611799-30611818 | None:intergenic | 30.0% |
| ! | TTTTCATCTGCTTATGGTTA+TGG | - | chr5.4:30611347-30611366 | MS.gene53056:CDS | 30.0% |
| !! | CTTAGTTCTAGTAACAAATG+TGG | - | chr5.4:30612554-30612573 | MS.gene53056:intron | 30.0% |
| !! | TGTCACTTTCAACTTGTAAA+TGG | - | chr5.4:30611934-30611953 | MS.gene53056:intron | 30.0% |
| AACCTATACAGTCAAGGTTA+TGG | - | chr5.4:30611562-30611581 | MS.gene53056:CDS | 35.0% | |
| AATGCACATGCAACTTTCTA+TGG | - | chr5.4:30611383-30611402 | MS.gene53056:CDS | 35.0% | |
| AATGCCTTGCCTAATAACAA+TGG | - | chr5.4:30611730-30611749 | MS.gene53056:intron | 35.0% | |
| AGAATTGCTCAATACAAAGC+TGG | - | chr5.4:30611808-30611827 | MS.gene53056:intron | 35.0% | |
| ATGCCAATGTCTAGAAATTG+GGG | - | chr5.4:30612630-30612649 | MS.gene53056:intron | 35.0% | |
| ATTGTTGTGTGGATTTGTGT+AGG | - | chr5.4:30612472-30612491 | MS.gene53056:CDS | 35.0% | |
| CTAGAAATTGGGGTCAAAAT+TGG | - | chr5.4:30612640-30612659 | MS.gene53056:intron | 35.0% | |
| CTATTAAAGGGTCAAGAACA+GGG | - | chr5.4:30612604-30612623 | MS.gene53056:intron | 35.0% | |
| CTTTATCTAGCTAGTCAATG+GGG | - | chr5.4:30612070-30612089 | MS.gene53056:intron | 35.0% | |
| GATGCCAATGTCTAGAAATT+GGG | - | chr5.4:30612629-30612648 | MS.gene53056:intron | 35.0% | |
| GGAATTAGGTTCACAATCAA+TGG | - | chr5.4:30612516-30612535 | MS.gene53056:CDS | 35.0% | |
| TAACCTTGAAAGACAAAGCT+TGG | + | chr5.4:30612689-30612708 | None:intergenic | 35.0% | |
| TATGGAAACCTATACAGTCA+AGG | - | chr5.4:30611556-30611575 | MS.gene53056:CDS | 35.0% | |
| TTCAAGGTTACAACAAGTGA+TGG | - | chr5.4:30612699-30612718 | MS.gene53056:CDS | 35.0% | |
| TTCCATAACCTTGACTGTAT+AGG | + | chr5.4:30611567-30611586 | None:intergenic | 35.0% | |
| TTGTTGTGTGGATTTGTGTA+GGG | - | chr5.4:30612473-30612492 | MS.gene53056:CDS | 35.0% | |
| ! | ACAAGTTGAAAGTGACATGA+AGG | + | chr5.4:30611931-30611950 | None:intergenic | 35.0% |
| ! | TTGTTCCTGTTTCTTACAGA+AGG | - | chr5.4:30611833-30611852 | MS.gene53056:intron | 35.0% |
| !! | TTATTAGGCAAGGCATTGTT+TGG | + | chr5.4:30611727-30611746 | None:intergenic | 35.0% |
| AAGTGATGCATCAGGAACAA+TGG | - | chr5.4:30611409-30611428 | MS.gene53056:CDS | 40.0% | |
| ACGTATTAGTCAAAAGGGGT+TGG | + | chr5.4:30611500-30611519 | None:intergenic | 40.0% | |
| AGTGATGCATCAGGAACAAT+GGG | - | chr5.4:30611410-30611429 | MS.gene53056:CDS | 40.0% | |
| GCTATTAAAGGGTCAAGAAC+AGG | - | chr5.4:30612603-30612622 | MS.gene53056:intron | 40.0% | |
| GGATGCCAATGTCTAGAAAT+TGG | - | chr5.4:30612628-30612647 | MS.gene53056:intron | 40.0% | |
| GTTCTAGTAACAAATGTGGG+TGG | - | chr5.4:30612558-30612577 | MS.gene53056:intron | 40.0% | |
| TCATCTGCTTATGGTTATGG+TGG | - | chr5.4:30611350-30611369 | MS.gene53056:CDS | 40.0% | |
| TGCCTAATAACAATGGAGGA+TGG | - | chr5.4:30611737-30611756 | MS.gene53056:intron | 40.0% | |
| ! | CACCATCCTCCATTGTTATT+AGG | + | chr5.4:30611742-30611761 | None:intergenic | 40.0% |
| ! | TCCTCCATTGTTATTAGGCA+AGG | + | chr5.4:30611737-30611756 | None:intergenic | 40.0% |
| ! | TCTCATTGGGTTGTTCTTCA+TGG | - | chr5.4:30611310-30611329 | MS.gene53056:CDS | 40.0% |
| ! | TGACCCCAATTTCTAGACAT+TGG | + | chr5.4:30612636-30612655 | None:intergenic | 40.0% |
| ! | TTATGGTTATGGTGGAGGAT+GGG | - | chr5.4:30611358-30611377 | MS.gene53056:CDS | 40.0% |
| !! | AGATCAAAGTGTTGCAAAGG+AGG | + | chr5.4:30611769-30611788 | None:intergenic | 40.0% |
| !! | GATCAAAGTGTTGCAAAGGA+GGG | + | chr5.4:30611768-30611787 | None:intergenic | 40.0% |
| !! | GCAAGATCAAAGTGTTGCAA+AGG | + | chr5.4:30611772-30611791 | None:intergenic | 40.0% |
| !! | GTGGTTCTTGCTTTGAGATT+AGG | - | chr5.4:30611635-30611654 | MS.gene53056:intron | 40.0% |
| !! | TTTTGTTTAGGTGGTGCATG+TGG | - | chr5.4:30611532-30611551 | MS.gene53056:CDS | 40.0% |
| AGCCAGGAAGACACCATTTA+CGG | + | chr5.4:30611672-30611691 | None:intergenic | 45.0% | |
| ATCTAGCTAGTCAATGGGGT+TGG | - | chr5.4:30612074-30612093 | MS.gene53056:intron | 45.0% | |
| GCACATGCAACTTTCTATGG+AGG | - | chr5.4:30611386-30611405 | MS.gene53056:CDS | 45.0% | |
| GCCTTGCCTAATAACAATGG+AGG | - | chr5.4:30611733-30611752 | MS.gene53056:intron | 45.0% | |
| TATGGAGGAAGTGATGCATC+AGG | - | chr5.4:30611401-30611420 | MS.gene53056:CDS | 45.0% | |
| TCTGCTTATGGTTATGGTGG+AGG | - | chr5.4:30611353-30611372 | MS.gene53056:CDS | 45.0% | |
| TTAAAGGGTCAAGAACAGGG+TGG | - | chr5.4:30612607-30612626 | MS.gene53056:intron | 45.0% | |
| TTAGGTGGTGCATGTGGATA+TGG | - | chr5.4:30611538-30611557 | MS.gene53056:CDS | 45.0% | |
| TTCAACAGTGGTTTGAGCTG+TGG | - | chr5.4:30611616-30611635 | MS.gene53056:intron | 45.0% | |
| ! | CTTATGGTTATGGTGGAGGA+TGG | - | chr5.4:30611357-30611376 | MS.gene53056:CDS | 45.0% |
| ! | TCTTTTGGTCAGACCTACAC+TGG | - | chr5.4:30612762-30612781 | MS.gene53056:CDS | 45.0% |
| ! | TGGCCAAGCTTTGTCTTTCA+AGG | - | chr5.4:30612683-30612702 | MS.gene53056:CDS | 45.0% |
| !! | AGCACAGCTTTGTTCAACAG+TGG | - | chr5.4:30611604-30611623 | MS.gene53056:intron | 45.0% |
| !! | TGCTTTGAGATTAGGTGTGC+TGG | - | chr5.4:30611643-30611662 | MS.gene53056:intron | 45.0% |
| !! | TTAGGCAAGGCATTGTTTGG+TGG | + | chr5.4:30611724-30611743 | None:intergenic | 45.0% |
| !!! | GTGTCTTCCTGGCTCTATTT+TGG | - | chr5.4:30611678-30611697 | MS.gene53056:intron | 45.0% |
| AATTCCTCCCCTTCTTCTGC+AGG | + | chr5.4:30612502-30612521 | None:intergenic | 50.0% | |
| ACCAAAAGACCAACCAGCTG+GGG | + | chr5.4:30612751-30612770 | None:intergenic | 50.0% | |
| ATTCCTCCCCTTCTTCTGCA+GGG | + | chr5.4:30612501-30612520 | None:intergenic | 50.0% | |
| GACCAAAAGACCAACCAGCT+GGG | + | chr5.4:30612752-30612771 | None:intergenic | 50.0% | |
| GACCGTAAATGGTGTCTTCC+TGG | - | chr5.4:30611667-30611686 | MS.gene53056:intron | 50.0% | |
| GCAGAAGAAGGGGAGGAATT+AGG | - | chr5.4:30612502-30612521 | MS.gene53056:CDS | 50.0% | |
| GCAGTGACCAAAATAGAGCC+AGG | + | chr5.4:30611688-30611707 | None:intergenic | 50.0% | |
| GTAACAAATGTGGGTGGTGC+TGG | - | chr5.4:30612564-30612583 | MS.gene53056:intron | 50.0% | |
| TGACCAAAAGACCAACCAGC+TGG | + | chr5.4:30612753-30612772 | None:intergenic | 50.0% | |
| ! | TAGGGTACCCTGCAGAAGAA+GGG | - | chr5.4:30612491-30612510 | MS.gene53056:CDS | 50.0% |
| ACGGAATTGGGCACCAGTGT+AGG | + | chr5.4:30612778-30612797 | None:intergenic | 55.0% | |
| ! | AGGGTACCCTGCAGAAGAAG+GGG | - | chr5.4:30612492-30612511 | MS.gene53056:CDS | 55.0% |
| ! | GGTGTGCTGGTGACCGTAAA+TGG | - | chr5.4:30611656-30611675 | MS.gene53056:intron | 55.0% |
| ! | GTAGGGTACCCTGCAGAAGA+AGG | - | chr5.4:30612490-30612509 | MS.gene53056:CDS | 55.0% |
| ACAATGCTGCCCCAGCTGGT+TGG | - | chr5.4:30612739-30612758 | MS.gene53056:CDS | 60.0% | |
| ACCAGCTGGGGCAGCATTGT+TGG | + | chr5.4:30612739-30612758 | None:intergenic | 60.0% | |
| GTACCCTGCAGAAGAAGGGG+AGG | - | chr5.4:30612495-30612514 | MS.gene53056:CDS | 60.0% | |
| TCCAACAATGCTGCCCCAGC+TGG | - | chr5.4:30612735-30612754 | MS.gene53056:CDS | 60.0% | |
| !!! | GCCCCAGCTGGTTGGTCTTT+TGG | - | chr5.4:30612747-30612766 | MS.gene53056:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 30611305 | 30612800 | 30611305 | ID=MS.gene53056 |
| chr5.4 | mRNA | 30611305 | 30612800 | 30611305 | ID=MS.gene53056.t1;Parent=MS.gene53056 |
| chr5.4 | exon | 30612674 | 30612800 | 30612674 | ID=MS.gene53056.t1.exon1;Parent=MS.gene53056.t1 |
| chr5.4 | CDS | 30612674 | 30612800 | 30612674 | ID=cds.MS.gene53056.t1;Parent=MS.gene53056.t1 |
| chr5.4 | exon | 30612251 | 30612563 | 30612251 | ID=MS.gene53056.t1.exon2;Parent=MS.gene53056.t1 |
| chr5.4 | CDS | 30612251 | 30612563 | 30612251 | ID=cds.MS.gene53056.t1;Parent=MS.gene53056.t1 |
| chr5.4 | exon | 30611305 | 30611611 | 30611305 | ID=MS.gene53056.t1.exon3;Parent=MS.gene53056.t1 |
| chr5.4 | CDS | 30611305 | 30611611 | 30611305 | ID=cds.MS.gene53056.t1;Parent=MS.gene53056.t1 |
| Gene Sequence |
| Protein sequence |
