Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53676.t1 | XP_013467217.1 | 99.7 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 1.30E-189 | 672.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53676.t1 | O23016 | 83.5 | 328 | 54 | 0 | 1 | 328 | 1 | 328 | 1.4e-165 | 583.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53676.t1 | I3S210 | 99.7 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 9.0e-190 | 672.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53676.t1 | MTR_1g047250 | 99.695 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 0.0 | 679 |
| MS.gene53676.t1 | MTR_7g114990 | 30.915 | 317 | 200 | 9 | 5 | 317 | 17 | 318 | 7.08e-32 | 122 |
| MS.gene53676.t1 | MTR_7g114980 | 30.721 | 319 | 172 | 12 | 6 | 301 | 16 | 308 | 5.32e-28 | 112 |
| MS.gene53676.t1 | MTR_7g115010 | 29.904 | 311 | 168 | 12 | 5 | 301 | 13 | 287 | 2.15e-27 | 109 |
| MS.gene53676.t1 | MTR_1g102750 | 28.662 | 314 | 182 | 10 | 6 | 301 | 10 | 299 | 2.33e-27 | 110 |
| MS.gene53676.t1 | MTR_7g114970 | 30.164 | 305 | 189 | 9 | 6 | 301 | 12 | 301 | 4.86e-27 | 108 |
| MS.gene53676.t1 | MTR_7g114970 | 34.043 | 235 | 139 | 7 | 5 | 233 | 11 | 235 | 1.65e-26 | 106 |
| MS.gene53676.t1 | MTR_7g114970 | 34.043 | 235 | 139 | 7 | 5 | 233 | 11 | 235 | 1.73e-26 | 106 |
| MS.gene53676.t1 | MTR_7g114980 | 31.379 | 290 | 150 | 12 | 6 | 272 | 16 | 279 | 6.79e-26 | 105 |
| MS.gene53676.t1 | MTR_1g042730 | 27.147 | 361 | 208 | 11 | 1 | 318 | 61 | 409 | 1.28e-25 | 106 |
| MS.gene53676.t1 | MTR_1g102750 | 28.866 | 291 | 165 | 10 | 6 | 278 | 10 | 276 | 2.26e-25 | 103 |
| MS.gene53676.t1 | MTR_7g021680 | 27.914 | 326 | 201 | 11 | 6 | 319 | 9 | 312 | 7.14e-23 | 97.4 |
| MS.gene53676.t1 | MTR_7g021820 | 27.914 | 326 | 201 | 11 | 6 | 319 | 9 | 312 | 7.14e-23 | 97.4 |
| MS.gene53676.t1 | MTR_4g092750 | 26.623 | 308 | 188 | 11 | 1 | 298 | 1 | 280 | 4.89e-22 | 94.7 |
| MS.gene53676.t1 | MTR_7g021850 | 27.103 | 321 | 205 | 11 | 6 | 316 | 9 | 310 | 3.54e-21 | 92.8 |
| MS.gene53676.t1 | MTR_4g092750 | 26.710 | 307 | 187 | 11 | 1 | 297 | 1 | 279 | 7.47e-21 | 91.3 |
| MS.gene53676.t1 | MTR_4g092750 | 28.319 | 226 | 141 | 7 | 1 | 216 | 1 | 215 | 3.27e-20 | 89.4 |
| MS.gene53676.t1 | MTR_7g114970 | 33.838 | 198 | 115 | 7 | 5 | 196 | 11 | 198 | 1.45e-18 | 82.8 |
| MS.gene53676.t1 | MTR_8g088160 | 29.412 | 255 | 143 | 8 | 11 | 232 | 49 | 299 | 7.21e-18 | 83.2 |
| MS.gene53676.t1 | MTR_7g114970 | 28.095 | 210 | 134 | 5 | 96 | 301 | 11 | 207 | 1.28e-17 | 81.3 |
| MS.gene53676.t1 | MTR_3g449790 | 28.617 | 311 | 191 | 10 | 6 | 299 | 40 | 336 | 7.06e-17 | 80.9 |
| MS.gene53676.t1 | MTR_3g092140 | 24.633 | 341 | 218 | 14 | 2 | 323 | 35 | 355 | 3.14e-16 | 79.7 |
| MS.gene53676.t1 | MTR_3g449790 | 28.617 | 311 | 185 | 10 | 6 | 299 | 40 | 330 | 1.00e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53676.t1 | AT1G04690 | 83.537 | 328 | 54 | 0 | 1 | 328 | 1 | 328 | 0.0 | 591 |
| MS.gene53676.t1 | AT1G60680 | 27.492 | 331 | 214 | 10 | 6 | 327 | 12 | 325 | 1.84e-25 | 104 |
| MS.gene53676.t1 | AT1G60690 | 28.701 | 331 | 209 | 11 | 6 | 327 | 12 | 324 | 3.60e-25 | 103 |
| MS.gene53676.t1 | AT1G60710 | 28.614 | 332 | 210 | 10 | 5 | 327 | 11 | 324 | 5.43e-25 | 103 |
| MS.gene53676.t1 | AT1G60750 | 28.963 | 328 | 196 | 11 | 6 | 327 | 13 | 309 | 7.56e-25 | 102 |
| MS.gene53676.t1 | AT1G04420 | 28.056 | 360 | 206 | 12 | 1 | 318 | 56 | 404 | 4.87e-24 | 102 |
| MS.gene53676.t1 | AT4G33670 | 26.284 | 331 | 202 | 12 | 1 | 318 | 4 | 305 | 2.20e-22 | 95.9 |
| MS.gene53676.t1 | AT1G60730 | 27.864 | 323 | 204 | 11 | 6 | 318 | 12 | 315 | 2.36e-21 | 93.6 |
| MS.gene53676.t1 | AT1G10810 | 27.707 | 314 | 184 | 11 | 6 | 301 | 12 | 300 | 7.76e-21 | 92.0 |
| MS.gene53676.t1 | AT1G60680 | 30.455 | 220 | 135 | 7 | 5 | 217 | 11 | 219 | 9.54e-20 | 87.0 |
| MS.gene53676.t1 | AT5G53580 | 26.623 | 308 | 189 | 12 | 11 | 299 | 45 | 334 | 8.90e-18 | 83.6 |
| MS.gene53676.t1 | AT1G60730 | 26.239 | 343 | 204 | 12 | 6 | 318 | 12 | 335 | 4.31e-17 | 81.6 |
| MS.gene53676.t1 | AT1G10810 | 29.358 | 218 | 135 | 7 | 5 | 215 | 11 | 216 | 1.16e-16 | 79.0 |
| MS.gene53676.t1 | AT1G06690 | 26.582 | 316 | 191 | 12 | 6 | 299 | 51 | 347 | 2.08e-16 | 79.7 |
| MS.gene53676.t1 | AT1G10810 | 28.968 | 252 | 139 | 10 | 65 | 301 | 22 | 248 | 3.43e-15 | 75.1 |
Find 90 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTCGACGAAGATCTTC+TGG | 0.250682 | 1.3:-28868504 | MS.gene53676:CDS |
| CTTGCGTCTGGAGTCCTTAC+TGG | 0.288666 | 1.3:-28865030 | MS.gene53676:CDS |
| CTTGACAGCCCCTTATCATT+AGG | 0.303435 | 1.3:+28868469 | None:intergenic |
| CTTCCCCTGTATTCTAGTTA+TGG | 0.322795 | 1.3:-28865078 | MS.gene53676:CDS |
| TCCAAAGCAAAACGGCTGTC+TGG | 0.347444 | 1.3:+28864982 | None:intergenic |
| ACGCCCAGTTCATCTGCTAT+TGG | 0.347932 | 1.3:+28864334 | None:intergenic |
| AAGCTTGGGCTGTTGCTAAT+AGG | 0.362015 | 1.3:-28868255 | MS.gene53676:CDS |
| TGTTGCTAATAGGTTGGATT+TGG | 0.368859 | 1.3:-28868245 | MS.gene53676:CDS |
| TACAACAACTTAGGCCGTTC+AGG | 0.370092 | 1.3:-28868730 | MS.gene53676:CDS |
| CTGTATGAATCAGCGCGCTT+TGG | 0.380687 | 1.3:+28862852 | None:intergenic |
| TACGGAGCATGGGTAAGTTT+CGG | 0.389998 | 1.3:-28868685 | MS.gene53676:CDS |
| CCAAAGCAAAACGGCTGTCT+GGG | 0.403649 | 1.3:+28864983 | None:intergenic |
| CTGTATTCTAGTTATGGAAT+TGG | 0.406038 | 1.3:-28865072 | MS.gene53676:CDS |
| GAAGCCAATAGCAGATGAAC+TGG | 0.416791 | 1.3:-28864338 | MS.gene53676:CDS |
| GCAATTGAAAGCTGTGCTAA+TGG | 0.419930 | 1.3:+28864310 | None:intergenic |
| CAGATAACTGACGAAACATT+AGG | 0.423044 | 1.3:+28864271 | None:intergenic |
| GTCAGCAGATTACTGAAGCT+TGG | 0.429632 | 1.3:-28868270 | MS.gene53676:CDS |
| CCCATGCTCCGTAGGAAAGT+TGG | 0.433619 | 1.3:+28868695 | None:intergenic |
| GGTTGATGATGTGCTCAAAA+AGG | 0.442188 | 1.3:-28864371 | MS.gene53676:CDS |
| ACTTGGAGTCCACTTGCGTC+TGG | 0.442488 | 1.3:-28865042 | MS.gene53676:CDS |
| TGGATGTTGTTTATTGTCAT+AGG | 0.443920 | 1.3:-28868390 | MS.gene53676:CDS |
| TTGCTTCTTTGACGTCGAGC+TGG | 0.446253 | 1.3:+28868659 | None:intergenic |
| CGGTCGCGCAGAGGAGATCA+TGG | 0.447884 | 1.3:-28868569 | MS.gene53676:CDS |
| GAAGATCTTCTGGGGAGGAC+AGG | 0.448578 | 1.3:-28868494 | MS.gene53676:CDS |
| TGTTTCGACGAAGATCTTCT+GGG | 0.448954 | 1.3:-28868503 | MS.gene53676:CDS |
| CAATTCCATAACTAGAATAC+AGG | 0.449939 | 1.3:+28865073 | None:intergenic |
| TACTCAGGCTGTTCAACAAC+CGG | 0.454974 | 1.3:+28868217 | None:intergenic |
| GGACAGGGTCCTAATGATAA+GGG | 0.469976 | 1.3:-28868478 | MS.gene53676:CDS |
| TCAGCAGATTACTGAAGCTT+GGG | 0.470452 | 1.3:-28868269 | MS.gene53676:CDS |
| GATCTCCTCTGCGCGACCGT+TGG | 0.472405 | 1.3:+28868573 | None:intergenic |
| CTGAGTATAACCTCTTGAAC+AGG | 0.474892 | 1.3:-28868201 | MS.gene53676:CDS |
| GAAAGCGTCGTTGAAGAGGC+TGG | 0.475954 | 1.3:-28868425 | MS.gene53676:CDS |
| TGGCGCTACAAAAGAGTCTC+AGG | 0.481315 | 1.3:-28864248 | MS.gene53676:intron |
| TAGGTTGGATTTGGTTGGAC+CGG | 0.483964 | 1.3:-28868236 | MS.gene53676:CDS |
| GCTCTTACAGTCTCCTCAAT+CGG | 0.490523 | 1.3:+28868352 | None:intergenic |
| AGGACAGGGTCCTAATGATA+AGG | 0.490635 | 1.3:-28868479 | MS.gene53676:CDS |
| CGCCGTGGTCGCGACAGCAT+TGG | 0.498656 | 1.3:+28868626 | None:intergenic |
| GAGGCTGGGGATGGAGTATG+TGG | 0.500180 | 1.3:-28868410 | MS.gene53676:CDS |
| GCCAACTTTCCTACGGAGCA+TGG | 0.502151 | 1.3:-28868696 | MS.gene53676:CDS |
| GCTAATAGGTTGGATTTGGT+TGG | 0.504199 | 1.3:-28868241 | MS.gene53676:CDS |
| TTAGATTCATGAGAATATGA+AGG | 0.510165 | 1.3:-28862943 | MS.gene53676:intron |
| TTGGGCTGTTGCTAATAGGT+TGG | 0.517426 | 1.3:-28868251 | MS.gene53676:CDS |
| TTACCTTGTGCCTGTTCAAG+AGG | 0.520428 | 1.3:+28868191 | None:intergenic |
| GAATCTTGCATCTCGGTCAC+TGG | 0.522615 | 1.3:-28864392 | MS.gene53676:CDS |
| AAGCAATCAAAAGCCTTGAC+TGG | 0.525793 | 1.3:-28868543 | MS.gene53676:CDS |
| AAAGCGTCGTTGAAGAGGCT+GGG | 0.526852 | 1.3:-28868424 | MS.gene53676:CDS |
| GTACGAAAGCGTCGTTGAAG+AGG | 0.528372 | 1.3:-28868429 | MS.gene53676:CDS |
| GGATGTTTGTACGCCGATTG+AGG | 0.528436 | 1.3:-28868365 | MS.gene53676:CDS |
| ACTACTAACTCCTGCTGTGA+TGG | 0.528455 | 1.3:-28862904 | MS.gene53676:CDS |
| TGTCCGAGCGTTTCCAGTCA+AGG | 0.533084 | 1.3:+28868530 | None:intergenic |
| AACTGACGAAACATTAGGAT+TGG | 0.534487 | 1.3:+28864276 | None:intergenic |
| TCAATCTTCTCCATCACAGC+AGG | 0.538974 | 1.3:+28862894 | None:intergenic |
| CTTACTGGAAAATACAAGAA+AGG | 0.542569 | 1.3:-28865015 | MS.gene53676:CDS |
| ATGGAATTGGTCTCACCACT+TGG | 0.547573 | 1.3:-28865059 | MS.gene53676:CDS |
| GGTCGCGACAGCATTGGAGA+AGG | 0.549785 | 1.3:+28868632 | None:intergenic |
| AAGATGCAATACAACAACTT+AGG | 0.560476 | 1.3:-28868739 | MS.gene53676:CDS |
| TGCTGTGATGGAGAAGATTG+AGG | 0.560987 | 1.3:-28862892 | MS.gene53676:CDS |
| CAAAGCAAAACGGCTGTCTG+GGG | 0.571435 | 1.3:+28864984 | None:intergenic |
| CTAATGATAAGGGGCTGTCA+AGG | 0.571541 | 1.3:-28868468 | MS.gene53676:CDS |
| GTCGTTGAAGAGGCTGGGGA+TGG | 0.582056 | 1.3:-28868419 | MS.gene53676:CDS |
| CCAACTTTCCTACGGAGCAT+GGG | 0.588169 | 1.3:-28868695 | MS.gene53676:CDS |
| AAGCGTCGTTGAAGAGGCTG+GGG | 0.588685 | 1.3:-28868423 | MS.gene53676:CDS |
| AAGATCTTCTGGGGAGGACA+GGG | 0.591322 | 1.3:-28868493 | MS.gene53676:CDS |
| AAGCCTTGACTGGAAACGCT+CGG | 0.591374 | 1.3:-28868533 | MS.gene53676:CDS |
| TAGCACAGCTTTCAATTGCG+TGG | 0.595497 | 1.3:-28864306 | MS.gene53676:CDS |
| TGTTGTTTATTGTCATAGGC+CGG | 0.596655 | 1.3:-28868386 | MS.gene53676:CDS |
| TCAATCGGCGTACAAACATC+CGG | 0.597960 | 1.3:+28868367 | None:intergenic |
| GTCGCGACAGCATTGGAGAA+GGG | 0.598567 | 1.3:+28868633 | None:intergenic |
| TGTTGTAGAATCTTGCATCT+CGG | 0.602036 | 1.3:-28864399 | MS.gene53676:intron |
| CTCCAATGCTGTCGCGACCA+CGG | 0.607504 | 1.3:-28868628 | MS.gene53676:CDS |
| AAAGTCAGCCAACTTTCCTA+CGG | 0.613030 | 1.3:-28868703 | MS.gene53676:CDS |
| TCAAGGAAGCATATTGTGGA+AGG | 0.613945 | 1.3:-28868451 | MS.gene53676:CDS |
| AAAGCAAAACGGCTGTCTGG+GGG | 0.620635 | 1.3:+28864985 | None:intergenic |
| GTTTCGACGAAGATCTTCTG+GGG | 0.622965 | 1.3:-28868502 | MS.gene53676:CDS |
| AATGTTTCGTCAGTTATCTG+TGG | 0.624642 | 1.3:-28864268 | MS.gene53676:CDS |
| GAAACTTACCCATGCTCCGT+AGG | 0.626170 | 1.3:+28868687 | None:intergenic |
| GGTCGCGCAGAGGAGATCAT+GGG | 0.626550 | 1.3:-28868568 | MS.gene53676:CDS |
| GTAAGGACTCCAGACGCAAG+TGG | 0.627062 | 1.3:+28865033 | None:intergenic |
| AAGCCAATAGCAGATGAACT+GGG | 0.634352 | 1.3:-28864337 | MS.gene53676:CDS |
| CTACGCCAACGGTCGCGCAG+AGG | 0.636382 | 1.3:-28868578 | MS.gene53676:CDS |
| GCTGTCAAGGAAGCATATTG+TGG | 0.641699 | 1.3:-28868455 | MS.gene53676:CDS |
| TCGACGAAGATCTTCTGGGG+AGG | 0.642624 | 1.3:-28868499 | MS.gene53676:CDS |
| CTGTTCAAGAGGTTATACTC+AGG | 0.655970 | 1.3:+28868202 | None:intergenic |
| AACGCAGAAGTCTACGCCAA+CGG | 0.656202 | 1.3:-28868589 | MS.gene53676:CDS |
| TAACCTCTTGAACAGGCACA+AGG | 0.657377 | 1.3:-28868194 | MS.gene53676:intron |
| GACAGGGTCCTAATGATAAG+GGG | 0.658337 | 1.3:-28868477 | MS.gene53676:CDS |
| AGACGCAAGTGGACTCCAAG+TGG | 0.662326 | 1.3:+28865044 | None:intergenic |
| AATTCCATAACTAGAATACA+GGG | 0.664677 | 1.3:+28865074 | None:intergenic |
| TGTCGAAGAAGTTTACGCCG+TGG | 0.679789 | 1.3:+28868611 | None:intergenic |
| ATTCCATAACTAGAATACAG+GGG | 0.746347 | 1.3:+28865075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTAAATTTAAAA+AGG | - | chr1.3:28864901-28864920 | MS.gene53676:intron | 0.0% |
| !! | TTTAAAAAGAAAACTAAAAA+AGG | + | chr1.3:28866656-28866675 | None:intergenic | 10.0% |
| !!! | TTAACCTTTTTATATAAAAA+TGG | - | chr1.3:28864089-28864108 | MS.gene53676:intron | 10.0% |
| !! | AAAACACAAACATTAAATAA+AGG | - | chr1.3:28864412-28864431 | MS.gene53676:intron | 15.0% |
| !! | AAAATAAAAGCTTATTTAGT+TGG | - | chr1.3:28863631-28863650 | MS.gene53676:intron | 15.0% |
| !! | AAACACAAACATTAAATAAA+GGG | - | chr1.3:28864413-28864432 | MS.gene53676:intron | 15.0% |
| !! | ACAAGGTAATAAAAAATTTA+AGG | - | chr1.3:28866630-28866649 | MS.gene53676:intron | 15.0% |
| !! | AGATAAAAGTTACATATAAA+TGG | + | chr1.3:28868412-28868431 | None:intergenic | 15.0% |
| !! | ATACTAATAAATAATTGCAT+TGG | + | chr1.3:28864320-28864339 | None:intergenic | 15.0% |
| !! | TCATAAACTACATTTAAATT+TGG | + | chr1.3:28866746-28866765 | None:intergenic | 15.0% |
| !!! | AATTTTCTTATATATATGAC+CGG | - | chr1.3:28864515-28864534 | MS.gene53676:intron | 15.0% |
| !!! | ATTTGTTAAATTCCTTAAAT+GGG | + | chr1.3:28867928-28867947 | None:intergenic | 15.0% |
| !!! | TAAGCCATTTTTATATAAAA+AGG | + | chr1.3:28864096-28864115 | None:intergenic | 15.0% |
| !!! | TATTTGTTAAATTCCTTAAA+TGG | + | chr1.3:28867929-28867948 | None:intergenic | 15.0% |
| !!! | TGTGATATTTTCTTATAATT+TGG | - | chr1.3:28864474-28864493 | MS.gene53676:intron | 15.0% |
| !!! | TTTGTGTTTTTAATATTAGT+AGG | + | chr1.3:28864402-28864421 | None:intergenic | 15.0% |
| !! | AAACAGAACCATATATATAT+TGG | + | chr1.3:28864005-28864024 | None:intergenic | 20.0% |
| !! | AAAGATTAATCAACACTAAA+CGG | + | chr1.3:28865017-28865036 | None:intergenic | 20.0% |
| !! | AAATTATGTTGATATAAGGA+CGG | + | chr1.3:28868066-28868085 | None:intergenic | 20.0% |
| !! | ACAGAAATTATGTTGATATA+AGG | + | chr1.3:28868070-28868089 | None:intergenic | 20.0% |
| !! | ACTAATAAATACTGAGAATT+AGG | - | chr1.3:28867611-28867630 | MS.gene53676:intron | 20.0% |
| !! | ATAACATCGTTAAAATTGTT+GGG | + | chr1.3:28864642-28864661 | None:intergenic | 20.0% |
| !! | ATACATCAGCAATTTAAATT+TGG | + | chr1.3:28864875-28864894 | None:intergenic | 20.0% |
| !! | CAAGAAATTAAAACAAAGAA+TGG | - | chr1.3:28867743-28867762 | MS.gene53676:intron | 20.0% |
| !! | CTAATAAATACTGAGAATTA+GGG | - | chr1.3:28867612-28867631 | MS.gene53676:intron | 20.0% |
| !! | TAATAAATACTGAGAATTAG+GGG | - | chr1.3:28867613-28867632 | MS.gene53676:intron | 20.0% |
| !! | TACTTTCTCCAATATATATA+TGG | - | chr1.3:28863994-28864013 | MS.gene53676:intron | 20.0% |
| !! | TATAACATCGTTAAAATTGT+TGG | + | chr1.3:28864643-28864662 | None:intergenic | 20.0% |
| !! | TATTATGACCATAATAATGT+TGG | - | chr1.3:28863467-28863486 | MS.gene53676:intron | 20.0% |
| !!! | AATATATATATGGTTCTGTT+TGG | - | chr1.3:28864004-28864023 | MS.gene53676:intron | 20.0% |
| !!! | ATCAAAGTTGTTAGTTTTTT+TGG | - | chr1.3:28864963-28864982 | MS.gene53676:intron | 20.0% |
| !!! | ATGAATTTTGTTATTGATCA+AGG | - | chr1.3:28863256-28863275 | MS.gene53676:intron | 20.0% |
| !!! | ATGCATCATTTCATTTTAAT+TGG | - | chr1.3:28866424-28866443 | MS.gene53676:intron | 20.0% |
| !!! | ATGCTTTACAATTTTTTATG+AGG | + | chr1.3:28864371-28864390 | None:intergenic | 20.0% |
| !!! | ATTTAGTGAAGGATAAATTT+TGG | + | chr1.3:28866342-28866361 | None:intergenic | 20.0% |
| !!! | GAATAACATAGAAACTATTT+TGG | - | chr1.3:28866862-28866881 | MS.gene53676:intron | 20.0% |
| !!! | GCTTTTTTTTCTTTATTCTT+TGG | + | chr1.3:28868375-28868394 | None:intergenic | 20.0% |
| !!! | GTAACTTTTATCTTAATTTG+TGG | - | chr1.3:28868419-28868438 | MS.gene53676:CDS | 20.0% |
| !!! | GTTTTCACAAGTTTTTTTTT+TGG | - | chr1.3:28863961-28863980 | MS.gene53676:intron | 20.0% |
| !!! | TATCTTGTTTATTCTTTAGT+TGG | - | chr1.3:28865897-28865916 | MS.gene53676:intron | 20.0% |
| !!! | TGCTTTACAATTTTTTATGA+GGG | + | chr1.3:28864370-28864389 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | + | chr1.3:28864283-28864302 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTAATTTG+AGG | - | chr1.3:28868552-28868571 | MS.gene53676:CDS | 20.0% |
| !!! | TTTTTTTATCAATAGCGTAA+AGG | + | chr1.3:28864846-28864865 | None:intergenic | 20.0% |
| ! | AACCTATATGTCAATTTAGA+AGG | + | chr1.3:28867068-28867087 | None:intergenic | 25.0% |
| ! | AAGATTCTTAGTGAAATCAA+AGG | - | chr1.3:28865580-28865599 | MS.gene53676:intron | 25.0% |
| ! | AATTCCATAACTAGAATACA+GGG | + | chr1.3:28866513-28866532 | None:intergenic | 25.0% |
| ! | AATTTCATTGATGTGAAGTT+TGG | - | chr1.3:28866027-28866046 | MS.gene53676:intron | 25.0% |
| ! | ACCATAATAATGTTGGATTT+AGG | - | chr1.3:28863474-28863493 | MS.gene53676:intron | 25.0% |
| ! | AGTACACAACATATCAAATA+TGG | + | chr1.3:28863803-28863822 | None:intergenic | 25.0% |
| ! | ATAAGGGGACAAAATTATAA+TGG | + | chr1.3:28868473-28868492 | None:intergenic | 25.0% |
| ! | ATAGAGATCATAATATGTGA+GGG | - | chr1.3:28866898-28866917 | MS.gene53676:intron | 25.0% |
| ! | ATCAATGAAATTTAGATTCG+TGG | + | chr1.3:28866019-28866038 | None:intergenic | 25.0% |
| ! | GTACACAACATATCAAATAT+GGG | + | chr1.3:28863802-28863821 | None:intergenic | 25.0% |
| ! | TAACATCGTTAAAATTGTTG+GGG | + | chr1.3:28864641-28864660 | None:intergenic | 25.0% |
| ! | TACCAATTTATCATCCATAA+GGG | + | chr1.3:28863706-28863725 | None:intergenic | 25.0% |
| ! | TCAACAAATCTCAACAAAAA+TGG | + | chr1.3:28863427-28863446 | None:intergenic | 25.0% |
| ! | TCCTAAATCCAACATTATTA+TGG | + | chr1.3:28863478-28863497 | None:intergenic | 25.0% |
| ! | TCTTACAAAGAGATACAAAT+GGG | + | chr1.3:28865770-28865789 | None:intergenic | 25.0% |
| ! | TGCAATAAAATAGAAGACAA+AGG | - | chr1.3:28867967-28867986 | MS.gene53676:intron | 25.0% |
| ! | TTAGATTCATGAGAATATGA+AGG | - | chr1.3:28868641-28868660 | MS.gene53676:CDS | 25.0% |
| ! | TTCTTACAAAGAGATACAAA+TGG | + | chr1.3:28865771-28865790 | None:intergenic | 25.0% |
| ! | TTTATTCTTTAGTTGGATTG+TGG | - | chr1.3:28865904-28865923 | MS.gene53676:intron | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | + | chr1.3:28864278-28864297 | None:intergenic | 25.0% |
| !! | ATTCTCAAGACATTTTTACA+AGG | - | chr1.3:28867370-28867389 | MS.gene53676:intron | 25.0% |
| !! | ATTTTCCTATGCTTAAATCT+AGG | - | chr1.3:28868514-28868533 | MS.gene53676:CDS | 25.0% |
| !! | ATTTTTACAAGGACATCATT+TGG | - | chr1.3:28867381-28867400 | MS.gene53676:intron | 25.0% |
| !! | GGATAAGATTTGTGTATTTT+GGG | - | chr1.3:28865225-28865244 | MS.gene53676:intron | 25.0% |
| !! | TGCTGATATGTGTAAATTTT+CGG | + | chr1.3:28867023-28867042 | None:intergenic | 25.0% |
| !! | TGTAATTTTCCAAAGCAAAA+CGG | + | chr1.3:28866613-28866632 | None:intergenic | 25.0% |
| !! | TTTTAGATACTAAAGGTTGA+GGG | - | chr1.3:28865390-28865409 | MS.gene53676:intron | 25.0% |
| !! | TTTTTACAAGGACATCATTT+GGG | - | chr1.3:28867382-28867401 | MS.gene53676:intron | 25.0% |
| !!! | AATGTTCTTTGTTTTCCTAA+TGG | - | chr1.3:28867557-28867576 | MS.gene53676:intron | 25.0% |
| !!! | AATTAGACTAGCTCTATATA+AGG | - | chr1.3:28867773-28867792 | MS.gene53676:intron | 25.0% |
| !!! | AGTACTTTTTGTTGGAAATT+GGG | - | chr1.3:28864542-28864561 | MS.gene53676:intron | 25.0% |
| !!! | ATCTTCTTGTTTTAGTTTAG+TGG | - | chr1.3:28864224-28864243 | MS.gene53676:intron | 25.0% |
| !!! | ATTAGACTAGCTCTATATAA+GGG | - | chr1.3:28867774-28867793 | MS.gene53676:intron | 25.0% |
| !!! | ATTTTGTTATTGATCAAGGT+TGG | - | chr1.3:28863260-28863279 | MS.gene53676:intron | 25.0% |
| !!! | CATTGGTTTTGATGTTTTTT+TGG | + | chr1.3:28864303-28864322 | None:intergenic | 25.0% |
| !!! | TTTAGGGTTTTAGATACTAA+AGG | - | chr1.3:28865383-28865402 | MS.gene53676:intron | 25.0% |
| !!! | TTTTAGTTTCCACTATATGA+TGG | - | chr1.3:28866191-28866210 | MS.gene53676:intron | 25.0% |
| !!! | TTTTGCTTTGGAAAATTACA+AGG | - | chr1.3:28866613-28866632 | MS.gene53676:intron | 25.0% |
| !!! | TTTTGTTATTGATCAAGGTT+GGG | - | chr1.3:28863261-28863280 | MS.gene53676:intron | 25.0% |
| AAAAAACTTGTGAAAACCAG+TGG | + | chr1.3:28863958-28863977 | None:intergenic | 30.0% | |
| AAATGACATCAATTGCTTTC+AGG | + | chr1.3:28868544-28868563 | None:intergenic | 30.0% | |
| AATTGGGTAACAGATATAAG+GGG | + | chr1.3:28868327-28868346 | None:intergenic | 30.0% | |
| ACTTGAGGAAAAATCAAACT+TGG | + | chr1.3:28868249-28868268 | None:intergenic | 30.0% | |
| ATAAGCATACAGTAACCAAT+TGG | + | chr1.3:28866382-28866401 | None:intergenic | 30.0% | |
| ATGAAGAGTTAGGTCAATTT+CGG | - | chr1.3:28866798-28866817 | MS.gene53676:intron | 30.0% | |
| ATTCCATAACTAGAATACAG+GGG | + | chr1.3:28866512-28866531 | None:intergenic | 30.0% | |
| CAATGTACGACTAAAATGTT+TGG | - | chr1.3:28864609-28864628 | MS.gene53676:intron | 30.0% | |
| CAATTCCATAACTAGAATAC+AGG | + | chr1.3:28866514-28866533 | None:intergenic | 30.0% | |
| CTAAATTGACATATAGGTTC+TGG | - | chr1.3:28867069-28867088 | MS.gene53676:intron | 30.0% | |
| CTTACTGGAAAATACAAGAA+AGG | - | chr1.3:28866569-28866588 | MS.gene53676:intron | 30.0% | |
| CTTCACTAAATCTCATTATC+CGG | - | chr1.3:28866351-28866370 | MS.gene53676:intron | 30.0% | |
| GAAACAATTGTAAACACCTT+GGG | - | chr1.3:28865643-28865662 | MS.gene53676:intron | 30.0% | |
| GAATTGGGTAACAGATATAA+GGG | + | chr1.3:28868328-28868347 | None:intergenic | 30.0% | |
| GATAGAAGATGGAATGATTT+GGG | - | chr1.3:28866772-28866791 | MS.gene53676:intron | 30.0% | |
| GATAGAGATCATAATATGTG+AGG | - | chr1.3:28866897-28866916 | MS.gene53676:intron | 30.0% | |
| GATTCTATTGACATGTTTAG+TGG | - | chr1.3:28864714-28864733 | MS.gene53676:intron | 30.0% | |
| GCAATCAATCATTACAGTTA+CGG | + | chr1.3:28867046-28867065 | None:intergenic | 30.0% | |
| GCACTTAAACCAACATATAT+CGG | + | chr1.3:28868227-28868246 | None:intergenic | 30.0% | |
| GTACCAATTTATCATCCATA+AGG | + | chr1.3:28863707-28863726 | None:intergenic | 30.0% | |
| GTCAGAAGGTTAAAACAAAT+AGG | + | chr1.3:28866247-28866266 | None:intergenic | 30.0% | |
| GTTATTGCTTGTGGTTAATT+TGG | - | chr1.3:28865968-28865987 | MS.gene53676:intron | 30.0% | |
| TAAAAAGGAACGATTGTTGA+GGG | - | chr1.3:28864916-28864935 | MS.gene53676:intron | 30.0% | |
| TAGAGATCATAATATGTGAG+GGG | - | chr1.3:28866899-28866918 | MS.gene53676:intron | 30.0% | |
| TGAATTGGGTAACAGATATA+AGG | + | chr1.3:28868329-28868348 | None:intergenic | 30.0% | |
| TGATAGAAGATGGAATGATT+TGG | - | chr1.3:28866771-28866790 | MS.gene53676:intron | 30.0% | |
| TGCCTTCTAAATTGACATAT+AGG | - | chr1.3:28867063-28867082 | MS.gene53676:intron | 30.0% | |
| TGGAAAAGAAGCTGATAATT+TGG | - | chr1.3:28866272-28866291 | MS.gene53676:intron | 30.0% | |
| TGTTGAGGGTAAAATTGTAT+AGG | - | chr1.3:28864930-28864949 | MS.gene53676:intron | 30.0% | |
| TTAAAAAGGAACGATTGTTG+AGG | - | chr1.3:28864915-28864934 | MS.gene53676:intron | 30.0% | |
| TTATCCATACCATCATATAG+TGG | + | chr1.3:28866203-28866222 | None:intergenic | 30.0% | |
| TTCCCTTATGGATGATAAAT+TGG | - | chr1.3:28863701-28863720 | MS.gene53676:intron | 30.0% | |
| TTCTTATATATATGACCGGA+GGG | - | chr1.3:28864519-28864538 | MS.gene53676:intron | 30.0% | |
| TTGTAAGAACTCATTGATAG+TGG | - | chr1.3:28865782-28865801 | MS.gene53676:intron | 30.0% | |
| TTTATTCTTTGGTCTAACCT+TGG | + | chr1.3:28868364-28868383 | None:intergenic | 30.0% | |
| TTTCTTATATATATGACCGG+AGG | - | chr1.3:28864518-28864537 | MS.gene53676:intron | 30.0% | |
| TTTGATATGTTGTGTACTGT+TGG | - | chr1.3:28863805-28863824 | MS.gene53676:intron | 30.0% | |
| ! | ACTGAAAGTACAACCAATTA+TGG | - | chr1.3:28867895-28867914 | MS.gene53676:intron | 30.0% |
| ! | AGTGACGTTTTCGTTATTAA+AGG | - | chr1.3:28867714-28867733 | MS.gene53676:intron | 30.0% |
| ! | ATTTGGGTTTATGAAGAGTT+AGG | - | chr1.3:28866788-28866807 | MS.gene53676:intron | 30.0% |
| ! | CGGATAAGATTTGTGTATTT+TGG | - | chr1.3:28865224-28865243 | MS.gene53676:intron | 30.0% |
| ! | CTGTATTCTAGTTATGGAAT+TGG | - | chr1.3:28866512-28866531 | MS.gene53676:intron | 30.0% |
| ! | CTTTCTTGTATTTTCCAGTA+AGG | + | chr1.3:28866571-28866590 | None:intergenic | 30.0% |
| ! | TACGGTTAGTGTTAATTTGA+TGG | - | chr1.3:28863896-28863915 | MS.gene53676:intron | 30.0% |
| ! | TAGATTGTTGTTATTGCTTG+TGG | - | chr1.3:28865959-28865978 | MS.gene53676:intron | 30.0% |
| ! | TCACTAAGAATCTTCTCTTT+TGG | + | chr1.3:28865574-28865593 | None:intergenic | 30.0% |
| ! | TGAAAAGTTTTCATGCCATT+AGG | + | chr1.3:28867575-28867594 | None:intergenic | 30.0% |
| ! | TGGATGTTGTTTATTGTCAT+AGG | - | chr1.3:28863194-28863213 | MS.gene53676:intron | 30.0% |
| ! | TTCATTAGTGTCTTGTTCAT+TGG | - | chr1.3:28865676-28865695 | MS.gene53676:intron | 30.0% |
| ! | TTCTTCACTGTTTCTTATGA+TGG | - | chr1.3:28866691-28866710 | MS.gene53676:intron | 30.0% |
| ! | TTTTAACCTTCTGACTATGA+TGG | - | chr1.3:28866252-28866271 | MS.gene53676:intron | 30.0% |
| !! | ACTATTTTGGATCGTTAACT+AGG | - | chr1.3:28866875-28866894 | MS.gene53676:intron | 30.0% |
| !! | ATGACTCAAAATTTGGTGTT+TGG | - | chr1.3:28865086-28865105 | MS.gene53676:CDS | 30.0% |
| !! | ATTTGGTGTTTGGAAAATGT+TGG | - | chr1.3:28865096-28865115 | MS.gene53676:CDS | 30.0% |
| !! | GAGTACTTTTTGTTGGAAAT+TGG | - | chr1.3:28864541-28864560 | MS.gene53676:intron | 30.0% |
| !! | GTTTTAGATACTAAAGGTTG+AGG | - | chr1.3:28865389-28865408 | MS.gene53676:intron | 30.0% |
| !! | TGGTTTTTGTTTCGATTTTC+TGG | - | chr1.3:28867642-28867661 | MS.gene53676:intron | 30.0% |
| !!! | AATGTATTTTTTACTCCCTC+CGG | - | chr1.3:28864256-28864275 | MS.gene53676:CDS | 30.0% |
| !!! | ATTTTGGCTGAAACAATCAT+TGG | + | chr1.3:28866326-28866345 | None:intergenic | 30.0% |
| !!! | CATTTTTTGACCCATTTGTT+GGG | - | chr1.3:28865321-28865340 | MS.gene53676:intron | 30.0% |
| !!! | TCTTGTTTTAGTTTAGTGGT+TGG | - | chr1.3:28864228-28864247 | MS.gene53676:intron | 30.0% |
| AAAGATGCAAATAGACTGTG+AGG | - | chr1.3:28867832-28867851 | MS.gene53676:intron | 35.0% | |
| AACTGACGAAACATTAGGAT+TGG | + | chr1.3:28867311-28867330 | None:intergenic | 35.0% | |
| AAGCTTCAAGATGTGAATCT+TGG | - | chr1.3:28865430-28865449 | MS.gene53676:intron | 35.0% | |
| AATCTTGGAGAACCAAAAGA+GGG | - | chr1.3:28865445-28865464 | MS.gene53676:intron | 35.0% | |
| AATGGGTCATCATCCATAAT+TGG | + | chr1.3:28867911-28867930 | None:intergenic | 35.0% | |
| AATGTTTCGTCAGTTATCTG+TGG | - | chr1.3:28867316-28867335 | MS.gene53676:intron | 35.0% | |
| ACACACACACACACAAATAA+GGG | + | chr1.3:28868489-28868508 | None:intergenic | 35.0% | |
| AGAAACAGTGAAGAAAGACA+CGG | + | chr1.3:28866686-28866705 | None:intergenic | 35.0% | |
| ATAAACAAGCCAATCCAAAC+GGG | + | chr1.3:28863501-28863520 | None:intergenic | 35.0% | |
| ATCATCCATAAGGGAAAAAG+TGG | + | chr1.3:28863697-28863716 | None:intergenic | 35.0% | |
| ATCTTTATCAGAGAACCTGT+TGG | - | chr1.3:28865031-28865050 | MS.gene53676:CDS | 35.0% | |
| ATTGGGTAACAGATATAAGG+GGG | + | chr1.3:28868326-28868345 | None:intergenic | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | - | chr1.3:28865694-28865713 | MS.gene53676:intron | 35.0% | |
| CAAACATGAGACTTTACTTG+AGG | + | chr1.3:28868264-28868283 | None:intergenic | 35.0% | |
| CAGATAACTGACGAAACATT+AGG | + | chr1.3:28867316-28867335 | None:intergenic | 35.0% | |
| CATAAACAAGCCAATCCAAA+CGG | + | chr1.3:28863502-28863521 | None:intergenic | 35.0% | |
| CGGATAATGAGATTTAGTGA+AGG | + | chr1.3:28866353-28866372 | None:intergenic | 35.0% | |
| CTAATTAGCGTTTATCGAGT+TGG | - | chr1.3:28866924-28866943 | MS.gene53676:intron | 35.0% | |
| CTAGACAAAAAAGTTTGAGG+TGG | + | chr1.3:28863925-28863944 | None:intergenic | 35.0% | |
| GAGCTAGACAAAAAAGTTTG+AGG | + | chr1.3:28863928-28863947 | None:intergenic | 35.0% | |
| GATTAATCAACACTAAACGG+CGG | + | chr1.3:28865014-28865033 | None:intergenic | 35.0% | |
| GCTTGCGTATGCAAAAATAT+CGG | + | chr1.3:28866083-28866102 | None:intergenic | 35.0% | |
| GGAAACAATTGTAAACACCT+TGG | - | chr1.3:28865642-28865661 | MS.gene53676:intron | 35.0% | |
| GGGAAAATGGGTAGAAATTA+GGG | - | chr1.3:28865706-28865725 | MS.gene53676:intron | 35.0% | |
| GTTCTCCTAGATTTAAGCAT+AGG | + | chr1.3:28868522-28868541 | None:intergenic | 35.0% | |
| GTTTCCACTATATGATGGTA+TGG | - | chr1.3:28866196-28866215 | MS.gene53676:intron | 35.0% | |
| TAAGCGTGGAGATTAGATTT+CGG | - | chr1.3:28864775-28864794 | MS.gene53676:intron | 35.0% | |
| TATGGATGATGACCCATTTA+AGG | - | chr1.3:28867913-28867932 | MS.gene53676:intron | 35.0% | |
| TATTGACAATGCTTCTTCGA+AGG | + | chr1.3:28868173-28868192 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | - | chr1.3:28865686-28865705 | MS.gene53676:intron | 35.0% | |
| TCTTTATCAGAGAACCTGTT+GGG | - | chr1.3:28865032-28865051 | MS.gene53676:CDS | 35.0% | |
| TGAAATCAAAGGCTAAGTGT+TGG | - | chr1.3:28865591-28865610 | MS.gene53676:intron | 35.0% | |
| TGACATGTTTAGTGGTTAGT+GGG | - | chr1.3:28864722-28864741 | MS.gene53676:intron | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | - | chr1.3:28865705-28865724 | MS.gene53676:intron | 35.0% | |
| TGGGCAATGTATATGACTAT+TGG | - | chr1.3:28864741-28864760 | MS.gene53676:intron | 35.0% | |
| TGTTGTAGAATCTTGCATCT+CGG | - | chr1.3:28867185-28867204 | MS.gene53676:intron | 35.0% | |
| TTCCACATGTAACAGAAAGT+TGG | + | chr1.3:28867538-28867557 | None:intergenic | 35.0% | |
| TTCTTATATTAAGGACCGGA+GGG | + | chr1.3:28864274-28864293 | None:intergenic | 35.0% | |
| TTGACATGTTTAGTGGTTAG+TGG | - | chr1.3:28864721-28864740 | MS.gene53676:intron | 35.0% | |
| TTGAGGGATGACTCAAAATT+TGG | - | chr1.3:28865079-28865098 | MS.gene53676:CDS | 35.0% | |
| TTGGATAAATCCATTGTTGG+TGG | - | chr1.3:28866150-28866169 | MS.gene53676:intron | 35.0% | |
| ! | AAGCATTGTCAATAGCTCAA+CGG | - | chr1.3:28868179-28868198 | MS.gene53676:intron | 35.0% |
| ! | AATGAATTTTCACTCTCCCA+AGG | + | chr1.3:28865662-28865681 | None:intergenic | 35.0% |
| ! | AGTTTGAGACATGAGACTTT+GGG | - | chr1.3:28864674-28864693 | MS.gene53676:intron | 35.0% |
| ! | ATCAAGGTTGGGCTTTTTAT+TGG | - | chr1.3:28863272-28863291 | MS.gene53676:intron | 35.0% |
| ! | CAACAATGGATTTATCCAAG+CGG | + | chr1.3:28866149-28866168 | None:intergenic | 35.0% |
| ! | CGTATGCAAAAATATCGGTT+GGG | + | chr1.3:28866078-28866097 | None:intergenic | 35.0% |
| ! | CTTGTGGTTAATTTGGTTGT+TGG | - | chr1.3:28865975-28865994 | MS.gene53676:intron | 35.0% |
| ! | GAAGCTGATAATTTGGAGTT+CGG | - | chr1.3:28866279-28866298 | MS.gene53676:intron | 35.0% |
| ! | GGGTAGAAATGGAATTGTTT+TGG | - | chr1.3:28867109-28867128 | MS.gene53676:intron | 35.0% |
| ! | GGTTAGTGTTAATTTGATGG+CGG | - | chr1.3:28863899-28863918 | MS.gene53676:intron | 35.0% |
| ! | TATGAGAGCATGATAGAAGA+TGG | - | chr1.3:28866761-28866780 | MS.gene53676:intron | 35.0% |
| ! | TCAAGGTTGGGCTTTTTATT+GGG | - | chr1.3:28863273-28863292 | MS.gene53676:intron | 35.0% |
| ! | TCTTTTCCATCATAGTCAGA+AGG | + | chr1.3:28866261-28866280 | None:intergenic | 35.0% |
| ! | TGTTGCTAATAGGTTGGATT+TGG | - | chr1.3:28863339-28863358 | MS.gene53676:intron | 35.0% |
| ! | TGTTGTTTATTGTCATAGGC+CGG | - | chr1.3:28863198-28863217 | MS.gene53676:intron | 35.0% |
| ! | TTGGAATCGTGACACAATTT+TGG | - | chr1.3:28865115-28865134 | MS.gene53676:intron | 35.0% |
| !! | AGAACTCATTGATAGTGGAT+TGG | - | chr1.3:28865787-28865806 | MS.gene53676:intron | 35.0% |
| !! | CATCATAGTTTCAAGTTGGT+TGG | + | chr1.3:28863779-28863798 | None:intergenic | 35.0% |
| !! | TTTGGATTGGCTTGTTTATG+AGG | - | chr1.3:28863502-28863521 | MS.gene53676:intron | 35.0% |
| !!! | AAAAGCCACTTTTTCCCTTA+TGG | - | chr1.3:28863689-28863708 | MS.gene53676:intron | 35.0% |
| !!! | GCATTTTTTGACCCATTTGT+TGG | - | chr1.3:28865320-28865339 | MS.gene53676:intron | 35.0% |
| AAAGTCAGCCAACTTTCCTA+CGG | - | chr1.3:28862881-28862900 | MS.gene53676:CDS | 40.0% | |
| AAGCAATCAAAAGCCTTGAC+TGG | - | chr1.3:28863041-28863060 | MS.gene53676:intron | 40.0% | |
| AAGCCAATAGCAGATGAACT+GGG | - | chr1.3:28867247-28867266 | MS.gene53676:intron | 40.0% | |
| AATCTCATGGAAACCAAAGG+AGG | - | chr1.3:28865355-28865374 | MS.gene53676:intron | 40.0% | |
| ACCAAGCTTACCCAACAAAT+GGG | + | chr1.3:28865334-28865353 | None:intergenic | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | - | chr1.3:28865398-28865417 | MS.gene53676:intron | 40.0% | |
| AGGAATGTGGTAGAGAAGAA+AGG | + | chr1.3:28868095-28868114 | None:intergenic | 40.0% | |
| AGTGTGTAAATGTGTGTTGC+AGG | - | chr1.3:28866469-28866488 | MS.gene53676:intron | 40.0% | |
| AGTTGGTTGGCAGTGTTAAT+AGG | + | chr1.3:28863766-28863785 | None:intergenic | 40.0% | |
| ATAGGAAGGACATCCTACAA+TGG | + | chr1.3:28863748-28863767 | None:intergenic | 40.0% | |
| ATCCCTTAAGCAAGTGATCA+GGG | + | chr1.3:28866120-28866139 | None:intergenic | 40.0% | |
| ATCTCATGGAAACCAAAGGA+GGG | - | chr1.3:28865356-28865375 | MS.gene53676:intron | 40.0% | |
| ATCTTGGAGAACCAAAAGAG+GGG | - | chr1.3:28865446-28865465 | MS.gene53676:intron | 40.0% | |
| ATGGATTTATCCAAGCGGTA+AGG | + | chr1.3:28866144-28866163 | None:intergenic | 40.0% | |
| ATGGTAAAGTGCATTGTTGC+AGG | + | chr1.3:28868454-28868473 | None:intergenic | 40.0% | |
| ATTCACCTCAGATTATGCCA+AGG | - | chr1.3:28868344-28868363 | MS.gene53676:CDS | 40.0% | |
| ATTCGAGCAAAATCGTGTCA+CGG | + | chr1.3:28865285-28865304 | None:intergenic | 40.0% | |
| ATTCGTGGAGCAAGTATCAA+TGG | + | chr1.3:28866004-28866023 | None:intergenic | 40.0% | |
| CAAGAAATACTTGTAGCAGC+TGG | - | chr1.3:28867469-28867488 | MS.gene53676:intron | 40.0% | |
| CAAGAAATGTTCACCCAGTT+CGG | + | chr1.3:28865850-28865869 | None:intergenic | 40.0% | |
| CACACACACACACAAATAAG+GGG | + | chr1.3:28868488-28868507 | None:intergenic | 40.0% | |
| CACACACACACACACAAATA+AGG | + | chr1.3:28868490-28868509 | None:intergenic | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | - | chr1.3:28865693-28865712 | MS.gene53676:intron | 40.0% | |
| CGCTTGGATAAATCCATTGT+TGG | - | chr1.3:28866147-28866166 | MS.gene53676:intron | 40.0% | |
| CTCCAACTTTCTGTTACATG+TGG | - | chr1.3:28867533-28867552 | MS.gene53676:intron | 40.0% | |
| CTGAGTATAACCTCTTGAAC+AGG | - | chr1.3:28863383-28863402 | MS.gene53676:intron | 40.0% | |
| CTGTTCAAGAGGTTATACTC+AGG | + | chr1.3:28863385-28863404 | None:intergenic | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | + | chr1.3:28864275-28864294 | None:intergenic | 40.0% | |
| GAATCTTGGAGAACCAAAAG+AGG | - | chr1.3:28865444-28865463 | MS.gene53676:intron | 40.0% | |
| GAGTACTAGAGAGAGAGAAA+GGG | - | chr1.3:28868000-28868019 | MS.gene53676:intron | 40.0% | |
| GATGTGCTCAAAAAGGTTGA+TGG | - | chr1.3:28867220-28867239 | MS.gene53676:intron | 40.0% | |
| GCAATTGAAAGCTGTGCTAA+TGG | + | chr1.3:28867277-28867296 | None:intergenic | 40.0% | |
| GCGTATGCAAAAATATCGGT+TGG | + | chr1.3:28866079-28866098 | None:intergenic | 40.0% | |
| GGGATTGAACCGATATATGT+TGG | - | chr1.3:28868215-28868234 | MS.gene53676:CDS | 40.0% | |
| GTGAATCTCATGGAAACCAA+AGG | - | chr1.3:28865352-28865371 | MS.gene53676:intron | 40.0% | |
| TAACAGGTTACGTTCAATCC+AGG | + | chr1.3:28868134-28868153 | None:intergenic | 40.0% | |
| TACAACACACGAGGAAAAGT+GGG | + | chr1.3:28867172-28867191 | None:intergenic | 40.0% | |
| TACTAAAGGTTGAGGGTCTT+TGG | - | chr1.3:28865397-28865416 | MS.gene53676:intron | 40.0% | |
| TATAAGGGGGCAAAACTATC+TGG | + | chr1.3:28868313-28868332 | None:intergenic | 40.0% | |
| TCAACGGTCGTACTATTGAA+GGG | - | chr1.3:28868195-28868214 | MS.gene53676:CDS | 40.0% | |
| TCAGCAGATTACTGAAGCTT+GGG | - | chr1.3:28863315-28863334 | MS.gene53676:intron | 40.0% | |
| TCTAACCTTGGCATAATCTG+AGG | + | chr1.3:28868352-28868371 | None:intergenic | 40.0% | |
| TGAGTACTAGAGAGAGAGAA+AGG | - | chr1.3:28867999-28868018 | MS.gene53676:intron | 40.0% | |
| TGATGCTCAGATTCTGTGTA+CGG | - | chr1.3:28863878-28863897 | MS.gene53676:intron | 40.0% | |
| TGGATTGAACGTAACCTGTT+AGG | - | chr1.3:28868133-28868152 | MS.gene53676:intron | 40.0% | |
| TGGATTTATCCAAGCGGTAA+GGG | + | chr1.3:28866143-28866162 | None:intergenic | 40.0% | |
| TGTTTCGACGAAGATCTTCT+GGG | - | chr1.3:28863081-28863100 | MS.gene53676:intron | 40.0% | |
| TTCTACCCATCATACAGCAA+TGG | + | chr1.3:28867097-28867116 | None:intergenic | 40.0% | |
| TTGTTTCGACGAAGATCTTC+TGG | - | chr1.3:28863080-28863099 | MS.gene53676:intron | 40.0% | |
| TTTCGGCTAGAAGAGTTTAG+TGG | - | chr1.3:28864792-28864811 | MS.gene53676:intron | 40.0% | |
| TTTGAGTCATCCCTCAACAA+GGG | + | chr1.3:28865076-28865095 | None:intergenic | 40.0% | |
| TTTGCAGCATCTTCCATTGT+AGG | - | chr1.3:28863732-28863751 | MS.gene53676:intron | 40.0% | |
| ! | AACCAAAGGAGGGAACTTTT+AGG | - | chr1.3:28865366-28865385 | MS.gene53676:intron | 40.0% |
| ! | AAGGAATCGTGACACGATTT+TGG | - | chr1.3:28865256-28865275 | MS.gene53676:intron | 40.0% |
| ! | AAGGTTGGGCTTTTTATTGG+GGG | - | chr1.3:28863275-28863294 | MS.gene53676:intron | 40.0% |
| ! | ACCAAAGGAGGGAACTTTTA+GGG | - | chr1.3:28865367-28865386 | MS.gene53676:intron | 40.0% |
| ! | AGAGTCTTTTGTGAGCAACT+TGG | - | chr1.3:28865533-28865552 | MS.gene53676:intron | 40.0% |
| ! | ATGCAAAAATATCGGTTGGG+AGG | + | chr1.3:28866075-28866094 | None:intergenic | 40.0% |
| ! | CAAGGTTGGGCTTTTTATTG+GGG | - | chr1.3:28863274-28863293 | MS.gene53676:intron | 40.0% |
| ! | CTGAGAATTAGGGGACTTTT+TGG | - | chr1.3:28867622-28867641 | MS.gene53676:intron | 40.0% |
| ! | CTTCCCCTGTATTCTAGTTA+TGG | - | chr1.3:28866506-28866525 | MS.gene53676:intron | 40.0% |
| ! | GAGTCTTTTGTGAGCAACTT+GGG | - | chr1.3:28865534-28865553 | MS.gene53676:intron | 40.0% |
| ! | GAGTTTGAGACATGAGACTT+TGG | - | chr1.3:28864673-28864692 | MS.gene53676:intron | 40.0% |
| ! | GCTAATAGGTTGGATTTGGT+TGG | - | chr1.3:28863343-28863362 | MS.gene53676:intron | 40.0% |
| ! | GGCATAATCTGAGGTGAATT+GGG | + | chr1.3:28868343-28868362 | None:intergenic | 40.0% |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | - | chr1.3:28865685-28865704 | MS.gene53676:intron | 40.0% |
| ! | TCAAGGAAGCATATTGTGGA+AGG | - | chr1.3:28863133-28863152 | MS.gene53676:intron | 40.0% |
| ! | TGCAAAAATATCGGTTGGGA+GGG | + | chr1.3:28866074-28866093 | None:intergenic | 40.0% |
| ! | TGGCATAATCTGAGGTGAAT+TGG | + | chr1.3:28868344-28868363 | None:intergenic | 40.0% |
| ! | TGGGCATCATAGTTTCAAGT+TGG | + | chr1.3:28863783-28863802 | None:intergenic | 40.0% |
| ! | TTTATTGGGGGACTAGTGAA+TGG | - | chr1.3:28863287-28863306 | MS.gene53676:intron | 40.0% |
| !! | CTCTATAGTTGACTTGCATG+TGG | + | chr1.3:28864574-28864593 | None:intergenic | 40.0% |
| !! | GGTTGATGATGTGCTCAAAA+AGG | - | chr1.3:28867213-28867232 | MS.gene53676:intron | 40.0% |
| !! | GTGACACAATTTTGGTATCG+TGG | - | chr1.3:28865123-28865142 | MS.gene53676:intron | 40.0% |
| !! | TATAGTTGACTTGCATGTGG+AGG | + | chr1.3:28864571-28864590 | None:intergenic | 40.0% |
| !! | TGCTGTATGATGGGTAGAAA+TGG | - | chr1.3:28867098-28867117 | MS.gene53676:intron | 40.0% |
| !! | TTAGTCGTACATTGACTCGA+GGG | + | chr1.3:28864603-28864622 | None:intergenic | 40.0% |
| !! | TTGTGGTTTTGCTATGCACT+TGG | - | chr1.3:28865921-28865940 | MS.gene53676:intron | 40.0% |
| !! | TTTAGTCGTACATTGACTCG+AGG | + | chr1.3:28864604-28864623 | None:intergenic | 40.0% |
| !! | TTTTGAGTCATCCCTCAACA+AGG | + | chr1.3:28865077-28865096 | None:intergenic | 40.0% |
| AACCAAAAGAGGGGGTTCTT+GGG | - | chr1.3:28865455-28865474 | MS.gene53676:intron | 45.0% | |
| AACCCCTGATCACTTGCTTA+AGG | - | chr1.3:28866114-28866133 | MS.gene53676:intron | 45.0% | |
| AAGCTTGGGCTGTTGCTAAT+AGG | - | chr1.3:28863329-28863348 | MS.gene53676:intron | 45.0% | |
| ACCCCTGATCACTTGCTTAA+GGG | - | chr1.3:28866115-28866134 | MS.gene53676:intron | 45.0% | |
| ACCCTAAAAGTTCCCTCCTT+TGG | + | chr1.3:28865371-28865390 | None:intergenic | 45.0% | |
| ACTACTAACTCCTGCTGTGA+TGG | - | chr1.3:28868680-28868699 | MS.gene53676:CDS | 45.0% | |
| AGCCAAATCGTGACACGATT+TGG | - | chr1.3:28865182-28865201 | MS.gene53676:intron | 45.0% | |
| AGGACAGGGTCCTAATGATA+AGG | - | chr1.3:28863105-28863124 | MS.gene53676:intron | 45.0% | |
| ATCAATCTCTCCCCCATAGT+AGG | - | chr1.3:28865814-28865833 | MS.gene53676:intron | 45.0% | |
| ATCCAGGAACTCAAGAACCA+CGG | + | chr1.3:28868118-28868137 | None:intergenic | 45.0% | |
| ATTGAACCAGGTGACCTAAC+AGG | + | chr1.3:28868150-28868169 | None:intergenic | 45.0% | |
| CACCAAGCTTACCCAACAAA+TGG | + | chr1.3:28865335-28865354 | None:intergenic | 45.0% | |
| CATTATCCGGTTGAGCCAAT+TGG | - | chr1.3:28866364-28866383 | MS.gene53676:intron | 45.0% | |
| CGAACTGGGTGAACATTTCT+TGG | - | chr1.3:28865848-28865867 | MS.gene53676:intron | 45.0% | |
| CTAATGATAAGGGGCTGTCA+AGG | - | chr1.3:28863116-28863135 | MS.gene53676:intron | 45.0% | |
| CTACAACACACGAGGAAAAG+TGG | + | chr1.3:28867173-28867192 | None:intergenic | 45.0% | |
| CTCAACGGTCGTACTATTGA+AGG | - | chr1.3:28868194-28868213 | MS.gene53676:intron | 45.0% | |
| CTTCTTCGAAGGATTGAACC+AGG | + | chr1.3:28868162-28868181 | None:intergenic | 45.0% | |
| CTTGACAGCCCCTTATCATT+AGG | + | chr1.3:28863118-28863137 | None:intergenic | 45.0% | |
| GAAGCCAATAGCAGATGAAC+TGG | - | chr1.3:28867246-28867265 | MS.gene53676:intron | 45.0% | |
| GACAGGGTCCTAATGATAAG+GGG | - | chr1.3:28863107-28863126 | MS.gene53676:intron | 45.0% | |
| GATCCCTTAAGCAAGTGATC+AGG | + | chr1.3:28866121-28866140 | None:intergenic | 45.0% | |
| GCAAGATTCTACAACACACG+AGG | + | chr1.3:28867181-28867200 | None:intergenic | 45.0% | |
| GCAGAAGGAATTACTGGGTA+TGG | + | chr1.3:28868044-28868063 | None:intergenic | 45.0% | |
| GCCAAATCGTGACACGATTT+GGG | - | chr1.3:28865183-28865202 | MS.gene53676:intron | 45.0% | |
| GCTCTTACAGTCTCCTCAAT+CGG | + | chr1.3:28863235-28863254 | None:intergenic | 45.0% | |
| GGACAGGGTCCTAATGATAA+GGG | - | chr1.3:28863106-28863125 | MS.gene53676:intron | 45.0% | |
| GGCTAGAAGAGTTTAGTGGT+TGG | - | chr1.3:28864796-28864815 | MS.gene53676:intron | 45.0% | |
| GGCTGGAGGTAAGTAAAGTT+TGG | - | chr1.3:28866300-28866319 | MS.gene53676:intron | 45.0% | |
| GGTCCAACTTGACCTACTAT+GGG | + | chr1.3:28865829-28865848 | None:intergenic | 45.0% | |
| GGTTGGCAGTGTTAATAGGA+AGG | + | chr1.3:28863762-28863781 | None:intergenic | 45.0% | |
| GTCAGCAGATTACTGAAGCT+TGG | - | chr1.3:28863314-28863333 | MS.gene53676:intron | 45.0% | |
| GTCCAACTTGACCTACTATG+GGG | + | chr1.3:28865828-28865847 | None:intergenic | 45.0% | |
| GTTGATATAAGGACGGCAGA+AGG | + | chr1.3:28868059-28868078 | None:intergenic | 45.0% | |
| GTTTCGACGAAGATCTTCTG+GGG | - | chr1.3:28863082-28863101 | MS.gene53676:intron | 45.0% | |
| TAACCTCTTGAACAGGCACA+AGG | - | chr1.3:28863390-28863409 | MS.gene53676:intron | 45.0% | |
| TAATCAACACTAAACGGCGG+TGG | + | chr1.3:28865011-28865030 | None:intergenic | 45.0% | |
| TACAACAACTTAGGCCGTTC+AGG | - | chr1.3:28862854-28862873 | MS.gene53676:CDS | 45.0% | |
| TACGGAGCATGGGTAAGTTT+CGG | - | chr1.3:28862899-28862918 | MS.gene53676:CDS | 45.0% | |
| TACTCAGGCTGTTCAACAAC+CGG | + | chr1.3:28863370-28863389 | None:intergenic | 45.0% | |
| TAGCACAGCTTTCAATTGCG+TGG | - | chr1.3:28867278-28867297 | MS.gene53676:intron | 45.0% | |
| TCAATCGGCGTACAAACATC+CGG | + | chr1.3:28863220-28863239 | None:intergenic | 45.0% | |
| TCAATCTTCTCCATCACAGC+AGG | + | chr1.3:28868693-28868712 | None:intergenic | 45.0% | |
| TCCAACTTGACCTACTATGG+GGG | + | chr1.3:28865827-28865846 | None:intergenic | 45.0% | |
| TCCCAAATCGTGTCACGATT+TGG | + | chr1.3:28865187-28865206 | None:intergenic | 45.0% | |
| TCCCTTAAGCAAGTGATCAG+GGG | + | chr1.3:28866119-28866138 | None:intergenic | 45.0% | |
| TCTTGGAGAACCAAAAGAGG+GGG | - | chr1.3:28865447-28865466 | MS.gene53676:intron | 45.0% | |
| TGGCACCATTGCTGTATGAT+GGG | - | chr1.3:28867089-28867108 | MS.gene53676:intron | 45.0% | |
| TGGTGTGCAATGTATAAGCG+TGG | - | chr1.3:28864761-28864780 | MS.gene53676:intron | 45.0% | |
| TTACCTTGTGCCTGTTCAAG+AGG | + | chr1.3:28863396-28863415 | None:intergenic | 45.0% | |
| TTCCAGAACACACCCATTCA+CGG | + | chr1.3:28865163-28865182 | None:intergenic | 45.0% | |
| TTGAGTCATCCCTCAACAAG+GGG | + | chr1.3:28865075-28865094 | None:intergenic | 45.0% | |
| TTGGGCTGTTGCTAATAGGT+TGG | - | chr1.3:28863333-28863352 | MS.gene53676:intron | 45.0% | |
| ! | ACCCATTTGTTGGGTAAGCT+TGG | - | chr1.3:28865330-28865349 | MS.gene53676:intron | 45.0% |
| ! | ATAATTTGGAGTTCGGCTGG+AGG | - | chr1.3:28866286-28866305 | MS.gene53676:intron | 45.0% |
| ! | ATGGAATTGGTCTCACCACT+TGG | - | chr1.3:28866525-28866544 | MS.gene53676:intron | 45.0% |
| ! | CAGTAACCAATTGGCTCAAC+CGG | + | chr1.3:28866373-28866392 | None:intergenic | 45.0% |
| ! | CTGATAATTTGGAGTTCGGC+TGG | - | chr1.3:28866283-28866302 | MS.gene53676:intron | 45.0% |
| ! | GATTTAGGACCCGTTTGGAT+TGG | - | chr1.3:28863489-28863508 | MS.gene53676:intron | 45.0% |
| ! | GCAAAAATATCGGTTGGGAG+GGG | + | chr1.3:28866073-28866092 | None:intergenic | 45.0% |
| ! | GCTGTCAAGGAAGCATATTG+TGG | - | chr1.3:28863129-28863148 | MS.gene53676:intron | 45.0% |
| ! | GGTAAGCTTGGTGAATCTCA+TGG | - | chr1.3:28865342-28865361 | MS.gene53676:intron | 45.0% |
| ! | GTATCGTGGCACGATTTTCA+AGG | - | chr1.3:28865137-28865156 | MS.gene53676:intron | 45.0% |
| ! | TAGGTTGGATTTGGTTGGAC+CGG | - | chr1.3:28863348-28863367 | MS.gene53676:intron | 45.0% |
| ! | TGACACGATTTGGGAAAACG+TGG | - | chr1.3:28865192-28865211 | MS.gene53676:intron | 45.0% |
| ! | TGCTGTGATGGAGAAGATTG+AGG | - | chr1.3:28868692-28868711 | MS.gene53676:CDS | 45.0% |
| ! | TGTTGGATTTAGGACCCGTT+TGG | - | chr1.3:28863484-28863503 | MS.gene53676:intron | 45.0% |
| !! | ACGATTTTCAAGGCCGTGAA+TGG | - | chr1.3:28865147-28865166 | MS.gene53676:intron | 45.0% |
| !! | AGGCTAAGTGTTGGTTCTCT+TGG | - | chr1.3:28865600-28865619 | MS.gene53676:intron | 45.0% |
| !! | CCAACAAAAAGTACTCCCTC+CGG | + | chr1.3:28864537-28864556 | None:intergenic | 45.0% |
| !! | CCTTTTGGGGAAGATTCATG+GGG | - | chr1.3:28865491-28865510 | MS.gene53676:intron | 45.0% |
| !! | CGATTTTCAAGGCCGTGAAT+GGG | - | chr1.3:28865148-28865167 | MS.gene53676:intron | 45.0% |
| !! | CTAAGTGTTGGTTCTCTTGG+GGG | - | chr1.3:28865603-28865622 | MS.gene53676:intron | 45.0% |
| !! | GCATAACTTGCTTGCAAGAG+TGG | - | chr1.3:28868574-28868593 | MS.gene53676:CDS | 45.0% |
| !! | GCCTTTTGGGGAAGATTCAT+GGG | - | chr1.3:28865490-28865509 | MS.gene53676:intron | 45.0% |
| !! | GCTAAGTGTTGGTTCTCTTG+GGG | - | chr1.3:28865602-28865621 | MS.gene53676:intron | 45.0% |
| !! | GGCTAAGTGTTGGTTCTCTT+GGG | - | chr1.3:28865601-28865620 | MS.gene53676:intron | 45.0% |
| !! | GGCTGACTTTTAGACCTGAA+CGG | + | chr1.3:28862871-28862890 | None:intergenic | 45.0% |
| !! | GGGGGTTAGATTCTAGAGTT+GGG | - | chr1.3:28865621-28865640 | MS.gene53676:intron | 45.0% |
| !! | TGCCTTTTGGGGAAGATTCA+TGG | - | chr1.3:28865489-28865508 | MS.gene53676:intron | 45.0% |
| !! | TGGGGGTTAGATTCTAGAGT+TGG | - | chr1.3:28865620-28865639 | MS.gene53676:intron | 45.0% |
| !! | TGTATTTTGGGTCGTACGCA+AGG | - | chr1.3:28865237-28865256 | MS.gene53676:intron | 45.0% |
| !!! | AAAAGGGTTGGTGCCTTTTG+GGG | - | chr1.3:28865478-28865497 | MS.gene53676:intron | 45.0% |
| !!! | GAAAAGGGTTGGTGCCTTTT+GGG | - | chr1.3:28865477-28865496 | MS.gene53676:intron | 45.0% |
| !!! | AAAATTTTCAAAAAAAAATT+TGG | + | chr1.3:28864501-28864520 | None:intergenic | 5.0% |
| AAAGCAAAACGGCTGTCTGG+GGG | + | chr1.3:28866602-28866621 | None:intergenic | 50.0% | |
| AACGCAGAAGTCTACGCCAA+CGG | - | chr1.3:28862995-28863014 | MS.gene53676:intron | 50.0% | |
| AAGAGGGGGTTCTTGGGAAA+AGG | - | chr1.3:28865461-28865480 | MS.gene53676:intron | 50.0% | |
| AAGCCTTGACTGGAAACGCT+CGG | - | chr1.3:28863051-28863070 | MS.gene53676:intron | 50.0% | |
| ACGCCCAGTTCATCTGCTAT+TGG | + | chr1.3:28867253-28867272 | None:intergenic | 50.0% | |
| ACGTAACCTGTTAGGTCACC+TGG | - | chr1.3:28868141-28868160 | MS.gene53676:intron | 50.0% | |
| AGAGGGGGTTCTTGGGAAAA+GGG | - | chr1.3:28865462-28865481 | MS.gene53676:intron | 50.0% | |
| AGGACGGCAGAAGGAATTAC+TGG | + | chr1.3:28868050-28868069 | None:intergenic | 50.0% | |
| CAAAGCAAAACGGCTGTCTG+GGG | + | chr1.3:28866603-28866622 | None:intergenic | 50.0% | |
| CCAAAGCAAAACGGCTGTCT+GGG | + | chr1.3:28866604-28866623 | None:intergenic | 50.0% | |
| CCAACTTTCCTACGGAGCAT+GGG | - | chr1.3:28862889-28862908 | MS.gene53676:CDS | 50.0% | |
| CCCCATGAATCTTCCCCAAA+AGG | + | chr1.3:28865494-28865513 | None:intergenic | 50.0% | |
| CGGTCCAACTTGACCTACTA+TGG | + | chr1.3:28865830-28865849 | None:intergenic | 50.0% | |
| CTGGCACCATTGCTGTATGA+TGG | - | chr1.3:28867088-28867107 | MS.gene53676:intron | 50.0% | |
| CTGTATGAATCAGCGCGCTT+TGG | + | chr1.3:28868735-28868754 | None:intergenic | 50.0% | |
| GAAACTTACCCATGCTCCGT+AGG | + | chr1.3:28862900-28862919 | None:intergenic | 50.0% | |
| GAACCAAAAGAGGGGGTTCT+TGG | - | chr1.3:28865454-28865473 | MS.gene53676:intron | 50.0% | |
| GAATCTTGCATCTCGGTCAC+TGG | - | chr1.3:28867192-28867211 | MS.gene53676:intron | 50.0% | |
| GAGCAACTTGGGTGAGTCTT+GGG | - | chr1.3:28865545-28865564 | MS.gene53676:intron | 50.0% | |
| GCACTTTGCACCACCAACAA+TGG | + | chr1.3:28866163-28866182 | None:intergenic | 50.0% | |
| GGAAAACGTGGCACGATTTG+CGG | - | chr1.3:28865204-28865223 | MS.gene53676:intron | 50.0% | |
| GGACGGCAGAAGGAATTACT+GGG | + | chr1.3:28868049-28868068 | None:intergenic | 50.0% | |
| TCAAGAACCACGGAGGAATG+TGG | + | chr1.3:28868108-28868127 | None:intergenic | 50.0% | |
| TCCAAAGCAAAACGGCTGTC+TGG | + | chr1.3:28866605-28866624 | None:intergenic | 50.0% | |
| TCCCCCATAGTAGGTCAAGT+TGG | - | chr1.3:28865823-28865842 | MS.gene53676:intron | 50.0% | |
| TGAGCAACTTGGGTGAGTCT+TGG | - | chr1.3:28865544-28865563 | MS.gene53676:intron | 50.0% | |
| TGGCGCTACAAAAGAGTCTC+AGG | - | chr1.3:28867336-28867355 | MS.gene53676:intron | 50.0% | |
| TGGGGAAGATTCATGGGGTT+GGG | - | chr1.3:28865496-28865515 | MS.gene53676:intron | 50.0% | |
| TGTCGAAGAAGTTTACGCCG+TGG | + | chr1.3:28862976-28862995 | None:intergenic | 50.0% | |
| TTAAGGGATCCCTTACCGCT+TGG | - | chr1.3:28866131-28866150 | MS.gene53676:intron | 50.0% | |
| TTCTCTACCACATTCCTCCG+TGG | - | chr1.3:28868098-28868117 | MS.gene53676:intron | 50.0% | |
| TTGCTTCTTTGACGTCGAGC+TGG | + | chr1.3:28862928-28862947 | None:intergenic | 50.0% | |
| TTGGGGAAGATTCATGGGGT+TGG | - | chr1.3:28865495-28865514 | MS.gene53676:intron | 50.0% | |
| ! | AAGATCTTCTGGGGAGGACA+GGG | - | chr1.3:28863091-28863110 | MS.gene53676:intron | 50.0% |
| ! | GGATGTTTGTACGCCGATTG+AGG | - | chr1.3:28863219-28863238 | MS.gene53676:intron | 50.0% |
| ! | TTCCCAAGAACCCCCTCTTT+TGG | + | chr1.3:28865460-28865479 | None:intergenic | 50.0% |
| !! | AAAGCGTCGTTGAAGAGGCT+GGG | - | chr1.3:28863160-28863179 | MS.gene53676:intron | 50.0% |
| !! | AGGTCAAGTTGGACCGAACT+GGG | - | chr1.3:28865834-28865853 | MS.gene53676:intron | 50.0% |
| !! | GTACGAAAGCGTCGTTGAAG+AGG | - | chr1.3:28863155-28863174 | MS.gene53676:intron | 50.0% |
| !! | TAGGTCAAGTTGGACCGAAC+TGG | - | chr1.3:28865833-28865852 | MS.gene53676:intron | 50.0% |
| !! | TGGGAGGGGTGTTGTGAATT+CGG | + | chr1.3:28866059-28866078 | None:intergenic | 50.0% |
| !!! | CCGGAGGGAGTACTTTTTGT+TGG | - | chr1.3:28864534-28864553 | MS.gene53676:intron | 50.0% |
| !!! | GGAAAAGGGTTGGTGCCTTT+TGG | - | chr1.3:28865476-28865495 | MS.gene53676:intron | 50.0% |
| AACCTGTTGGGCACACATGG+TGG | - | chr1.3:28865044-28865063 | MS.gene53676:CDS | 55.0% | |
| ACCTGTTGGGCACACATGGT+GGG | - | chr1.3:28865045-28865064 | MS.gene53676:CDS | 55.0% | |
| ACTTGGAGTCCACTTGCGTC+TGG | - | chr1.3:28866542-28866561 | MS.gene53676:intron | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+AGG | - | chr1.3:28865403-28865422 | MS.gene53676:intron | 55.0% | |
| CAGGAACTCAAGAACCACGG+AGG | + | chr1.3:28868115-28868134 | None:intergenic | 55.0% | |
| CCCATGCTCCGTAGGAAAGT+TGG | + | chr1.3:28862892-28862911 | None:intergenic | 55.0% | |
| CTCCGTGGTTCTTGAGTTCC+TGG | - | chr1.3:28868113-28868132 | MS.gene53676:intron | 55.0% | |
| GAGAACCTGTTGGGCACACA+TGG | - | chr1.3:28865041-28865060 | MS.gene53676:CDS | 55.0% | |
| GCCAACTTTCCTACGGAGCA+TGG | - | chr1.3:28862888-28862907 | MS.gene53676:CDS | 55.0% | |
| GGGGTTCTTGGGAAAAGGGT+TGG | - | chr1.3:28865466-28865485 | MS.gene53676:intron | 55.0% | |
| GGGGTTGGGAAACACATGAG+TGG | - | chr1.3:28865510-28865529 | MS.gene53676:intron | 55.0% | |
| GTAAGGACTCCAGACGCAAG+TGG | + | chr1.3:28866554-28866573 | None:intergenic | 55.0% | |
| GTGGGTTCTCCCCTTGTTGA+GGG | - | chr1.3:28865063-28865082 | MS.gene53676:CDS | 55.0% | |
| TGTCCGAGCGTTTCCAGTCA+AGG | + | chr1.3:28863057-28863076 | None:intergenic | 55.0% | |
| ! | AAGCGTCGTTGAAGAGGCTG+GGG | - | chr1.3:28863161-28863180 | MS.gene53676:intron | 55.0% |
| ! | AGACGCAAGTGGACTCCAAG+TGG | + | chr1.3:28866543-28866562 | None:intergenic | 55.0% |
| ! | CTTGCGTCTGGAGTCCTTAC+TGG | - | chr1.3:28866554-28866573 | MS.gene53676:intron | 55.0% |
| ! | GAAGATCTTCTGGGGAGGAC+AGG | - | chr1.3:28863090-28863109 | MS.gene53676:intron | 55.0% |
| ! | GTCGCGACAGCATTGGAGAA+GGG | + | chr1.3:28862954-28862973 | None:intergenic | 55.0% |
| ! | TCGACGAAGATCTTCTGGGG+AGG | - | chr1.3:28863085-28863104 | MS.gene53676:intron | 55.0% |
| !! | CCCAGACAGCCGTTTTGCTT+TGG | - | chr1.3:28866601-28866620 | MS.gene53676:intron | 55.0% |
| !! | GAAAGCGTCGTTGAAGAGGC+TGG | - | chr1.3:28863159-28863178 | MS.gene53676:intron | 55.0% |
| ACCCACCATGTGTGCCCAAC+AGG | + | chr1.3:28865049-28865068 | None:intergenic | 60.0% | |
| CTCCAATGCTGTCGCGACCA+CGG | - | chr1.3:28862956-28862975 | MS.gene53676:intron | 60.0% | |
| GAGGCTGGGGATGGAGTATG+TGG | - | chr1.3:28863174-28863193 | MS.gene53676:intron | 60.0% | |
| GGCCGTGAATGGGTGTGTTC+TGG | - | chr1.3:28865158-28865177 | MS.gene53676:intron | 60.0% | |
| GGTCGCGCAGAGGAGATCAT+GGG | - | chr1.3:28863016-28863035 | MS.gene53676:intron | 60.0% | |
| GTCGTTGAAGAGGCTGGGGA+TGG | - | chr1.3:28863165-28863184 | MS.gene53676:intron | 60.0% | |
| ! | GGTCGCGACAGCATTGGAGA+AGG | + | chr1.3:28862955-28862974 | None:intergenic | 60.0% |
| ! | GGTGGGTTCTCCCCTTGTTG+AGG | - | chr1.3:28865062-28865081 | MS.gene53676:CDS | 60.0% |
| !! | GTCTAGCTCTGCTCTGCCAC+TGG | - | chr1.3:28863939-28863958 | MS.gene53676:intron | 60.0% |
| CGGTCGCGCAGAGGAGATCA+TGG | - | chr1.3:28863015-28863034 | MS.gene53676:intron | 65.0% | |
| GATCTCCTCTGCGCGACCGT+TGG | + | chr1.3:28863014-28863033 | None:intergenic | 65.0% | |
| CGCCGTGGTCGCGACAGCAT+TGG | + | chr1.3:28862961-28862980 | None:intergenic | 70.0% | |
| CTACGCCAACGGTCGCGCAG+AGG | - | chr1.3:28863006-28863025 | MS.gene53676:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 28862848 | 28868758 | 28862848 | ID=MS.gene53676 |
| chr1.3 | mRNA | 28862848 | 28868758 | 28862848 | ID=MS.gene53676.t1;Parent=MS.gene53676 |
| chr1.3 | exon | 28868195 | 28868758 | 28868195 | ID=MS.gene53676.t1.exon1;Parent=MS.gene53676.t1 |
| chr1.3 | CDS | 28868195 | 28868758 | 28868195 | ID=cds.MS.gene53676.t1;Parent=MS.gene53676.t1 |
| chr1.3 | exon | 28864972 | 28865115 | 28864972 | ID=MS.gene53676.t1.exon2;Parent=MS.gene53676.t1 |
| chr1.3 | CDS | 28864972 | 28865115 | 28864972 | ID=cds.MS.gene53676.t1;Parent=MS.gene53676.t1 |
| chr1.3 | exon | 28864249 | 28864413 | 28864249 | ID=MS.gene53676.t1.exon3;Parent=MS.gene53676.t1 |
| chr1.3 | CDS | 28864249 | 28864413 | 28864249 | ID=cds.MS.gene53676.t1;Parent=MS.gene53676.t1 |
| chr1.3 | exon | 28862848 | 28862961 | 28862848 | ID=MS.gene53676.t1.exon4;Parent=MS.gene53676.t1 |
| chr1.3 | CDS | 28862848 | 28862961 | 28862848 | ID=cds.MS.gene53676.t1;Parent=MS.gene53676.t1 |
| Gene Sequence |
| Protein sequence |
