Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56436.t1 | GAY33737.1 | 82.7 | 214 | 34 | 1 | 4 | 214 | 2 | 215 | 5.40E-96 | 360.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56436.t1 | Q9ZTW3 | 80.1 | 171 | 34 | 0 | 5 | 175 | 3 | 173 | 4.0e-76 | 285.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56436.t1 | A0A2H5N1D7 | 82.7 | 214 | 34 | 1 | 4 | 214 | 2 | 215 | 3.9e-96 | 360.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene56436 | -0.82223 | 2.65E-53 | -1.69E-46 |
| MS.gene049411 | MS.gene56436 | 0.850738 | 1.40E-60 | -1.69E-46 |
| MS.gene049674 | MS.gene56436 | 0.823446 | 1.38E-53 | -1.69E-46 |
| MS.gene049680 | MS.gene56436 | 0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene56436 | 0.812371 | 4.38E-51 | -1.69E-46 |
| MS.gene05029 | MS.gene56436 | 0.809765 | 1.61E-50 | -1.69E-46 |
| MS.gene050320 | MS.gene56436 | 0.808053 | 3.74E-50 | -1.69E-46 |
| MS.gene050437 | MS.gene56436 | 0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene56436 | 0.811201 | 7.88E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene56436 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene56436 | 0.904667 | 9.66E-80 | -1.69E-46 |
| MS.gene050838 | MS.gene56436 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene56436 | 0.820896 | 5.38E-53 | -1.69E-46 |
| MS.gene050955 | MS.gene56436 | 0.875185 | 3.76E-68 | -1.69E-46 |
| MS.gene051003 | MS.gene56436 | 0.846729 | 1.81E-59 | -1.69E-46 |
| MS.gene051043 | MS.gene56436 | 0.811515 | 6.74E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene56436 | 0.865678 | 4.96E-65 | -1.69E-46 |
| MS.gene051343 | MS.gene56436 | 0.830298 | 3.18E-55 | -1.69E-46 |
| MS.gene051642 | MS.gene56436 | 0.819701 | 1.01E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene56436 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene56436 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene56436 | 0.823323 | 1.47E-53 | -1.69E-46 |
| MS.gene051903 | MS.gene56436 | 0.819556 | 1.09E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene56436 | 0.813925 | 2.00E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene56436 | 0.862581 | 4.58E-64 | -1.69E-46 |
| MS.gene052296 | MS.gene56436 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene56436 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene56436 | 0.826479 | 2.65E-54 | -1.69E-46 |
| MS.gene053879 | MS.gene56436 | 0.831331 | 1.77E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene56436 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene56436 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene054005 | MS.gene56436 | 0.801186 | 1.01E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene56436 | 0.904484 | 1.17E-79 | -1.69E-46 |
| MS.gene054413 | MS.gene56436 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene05469 | MS.gene56436 | 0.858768 | 6.57E-63 | -1.69E-46 |
| MS.gene056986 | MS.gene56436 | 0.822573 | 2.20E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene56436 | 0.816695 | 4.84E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene56436 | 0.823837 | 1.12E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene56436 | 0.811918 | 5.51E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene56436 | 0.822429 | 2.38E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene56436 | 0.848599 | 5.53E-60 | -1.69E-46 |
| MS.gene058054 | MS.gene56436 | 0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene56436 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene058074 | MS.gene56436 | 0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene56436 | 0.852827 | 3.57E-61 | -1.69E-46 |
| MS.gene059227 | MS.gene56436 | 0.814637 | 1.39E-51 | -1.69E-46 |
| MS.gene059590 | MS.gene56436 | 0.817172 | 3.78E-52 | -1.69E-46 |
| MS.gene059802 | MS.gene56436 | 0.826024 | 3.40E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene56436 | 0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene060763 | MS.gene56436 | 0.847826 | 9.04E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene56436 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene56436 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene06118 | MS.gene56436 | 0.814375 | 1.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56436.t1 | MTR_4g083490 | 100.000 | 175 | 0 | 0 | 1 | 175 | 1 | 175 | 1.54e-130 | 366 |
| MS.gene56436.t1 | MTR_2g028790 | 90.751 | 173 | 16 | 0 | 3 | 175 | 5 | 177 | 1.74e-119 | 338 |
| MS.gene56436.t1 | MTR_4g022570 | 73.057 | 193 | 48 | 1 | 5 | 197 | 3 | 191 | 2.99e-106 | 305 |
| MS.gene56436.t1 | MTR_1g047720 | 75.543 | 184 | 41 | 1 | 5 | 188 | 3 | 182 | 1.45e-105 | 303 |
| MS.gene56436.t1 | MTR_7g058900 | 75.275 | 182 | 39 | 1 | 5 | 180 | 3 | 184 | 2.17e-101 | 293 |
| MS.gene56436.t1 | MTR_7g058640 | 68.421 | 171 | 54 | 0 | 5 | 175 | 3 | 173 | 4.07e-88 | 259 |
| MS.gene56436.t1 | MTR_2g436870 | 61.340 | 194 | 71 | 1 | 4 | 197 | 2 | 191 | 6.20e-88 | 259 |
| MS.gene56436.t1 | MTR_7g058640 | 67.836 | 171 | 55 | 0 | 5 | 175 | 3 | 173 | 1.66e-87 | 256 |
| MS.gene56436.t1 | MTR_1g111890 | 53.991 | 213 | 76 | 3 | 4 | 194 | 2 | 214 | 2.68e-81 | 243 |
| MS.gene56436.t1 | MTR_1g047710 | 74.167 | 120 | 27 | 1 | 66 | 185 | 12 | 127 | 1.96e-61 | 188 |
| MS.gene56436.t1 | MTR_4g022470 | 79.439 | 107 | 22 | 0 | 66 | 172 | 10 | 116 | 9.73e-59 | 181 |
| MS.gene56436.t1 | MTR_7g058640 | 71.579 | 95 | 27 | 0 | 81 | 175 | 1 | 95 | 1.11e-45 | 148 |
| MS.gene56436.t1 | MTR_5g089370 | 39.759 | 166 | 97 | 3 | 8 | 172 | 3 | 166 | 9.09e-38 | 131 |
| MS.gene56436.t1 | MTR_4g052550 | 35.119 | 168 | 104 | 4 | 7 | 172 | 2 | 166 | 1.22e-35 | 125 |
| MS.gene56436.t1 | MTR_4g115390 | 32.941 | 170 | 107 | 3 | 8 | 172 | 3 | 170 | 4.99e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56436.t1 | AT1G04760 | 74.611 | 193 | 45 | 1 | 5 | 197 | 3 | 191 | 2.93e-106 | 305 |
| MS.gene56436.t1 | AT1G04760 | 74.611 | 193 | 45 | 1 | 5 | 197 | 3 | 191 | 2.93e-106 | 305 |
| MS.gene56436.t1 | AT2G33120 | 77.717 | 184 | 37 | 1 | 5 | 188 | 3 | 182 | 1.13e-105 | 303 |
| MS.gene56436.t1 | AT2G32670 | 74.093 | 193 | 46 | 1 | 5 | 197 | 68 | 256 | 3.16e-105 | 305 |
| MS.gene56436.t1 | AT1G04750 | 76.087 | 184 | 40 | 1 | 5 | 188 | 3 | 182 | 1.26e-103 | 298 |
| MS.gene56436.t1 | AT2G33120 | 73.958 | 192 | 38 | 2 | 5 | 188 | 3 | 190 | 4.96e-102 | 295 |
| MS.gene56436.t1 | AT4G15780 | 68.023 | 172 | 54 | 1 | 5 | 175 | 3 | 174 | 7.72e-87 | 254 |
| MS.gene56436.t1 | AT2G33110 | 68.750 | 160 | 50 | 0 | 5 | 164 | 3 | 162 | 1.98e-81 | 241 |
| MS.gene56436.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene56436.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene56436.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene56436.t1 | AT2G33110 | 68.750 | 160 | 50 | 0 | 5 | 164 | 3 | 162 | 1.19e-80 | 240 |
| MS.gene56436.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene56436.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene56436.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene56436.t1 | AT5G11150 | 42.262 | 168 | 93 | 3 | 7 | 172 | 2 | 167 | 1.10e-40 | 138 |
| MS.gene56436.t1 | AT5G11150 | 42.262 | 168 | 93 | 3 | 7 | 172 | 2 | 167 | 2.36e-40 | 138 |
| MS.gene56436.t1 | AT4G32150 | 41.317 | 167 | 95 | 3 | 7 | 172 | 2 | 166 | 4.23e-40 | 137 |
| MS.gene56436.t1 | AT5G22360 | 36.686 | 169 | 101 | 4 | 7 | 172 | 2 | 167 | 3.99e-35 | 124 |
| MS.gene56436.t1 | AT2G25340 | 37.725 | 167 | 101 | 3 | 7 | 172 | 2 | 166 | 5.17e-35 | 124 |
| MS.gene56436.t1 | AT2G33120 | 67.188 | 64 | 17 | 1 | 125 | 188 | 41 | 100 | 5.81e-19 | 80.1 |
| MS.gene56436.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene56436.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene56436.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene56436.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene56436.t1 | AT3G24890 | 63.462 | 52 | 19 | 0 | 115 | 166 | 14 | 65 | 6.88e-16 | 71.6 |
Find 51 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGCTTGAATAAGGAATT+TGG | 0.135464 | 4.3:+27864603 | MS.gene56436:CDS |
| TGCATGTGTTCCTTCAATTT+TGG | 0.197558 | 4.3:-27864728 | None:intergenic |
| TTCAATTACCTCGTCGATAA+TGG | 0.314519 | 4.3:+27864178 | MS.gene56436:CDS |
| TGCACCTAACAGCTTGAATA+AGG | 0.338054 | 4.3:+27864596 | MS.gene56436:CDS |
| GTGAATTTGTTGTTAGAAGC+TGG | 0.366183 | 4.3:-27864133 | None:intergenic |
| TGAGGCAGGCACAAGACTTC+AGG | 0.377030 | 4.3:+27869534 | MS.gene56436:intron |
| ACAGCTTGAATAAGGAATTT+GGG | 0.392757 | 4.3:+27864604 | MS.gene56436:CDS |
| GCAAGCTTACTCACCTCCTC+CGG | 0.394354 | 4.3:-27864767 | None:intergenic |
| GTTGAAGTTTCCGCTGAATT+CGG | 0.415620 | 4.3:-27864080 | None:intergenic |
| AATTCCTTATTCAAGCTGTT+AGG | 0.425518 | 4.3:-27864600 | None:intergenic |
| GAAGATAAAGCTGATTGTAT+TGG | 0.457650 | 4.3:+27869601 | MS.gene56436:CDS |
| TATTTATTCTTAAGAACGAT+TGG | 0.463535 | 4.3:-27869659 | None:intergenic |
| TTGTGGCAGGCCAAAATTGA+AGG | 0.466510 | 4.3:+27864718 | MS.gene56436:intron |
| ATTTATTCTTAAGAACGATT+GGG | 0.491549 | 4.3:-27869658 | None:intergenic |
| ACTTGATGTAGGTCCTGGAC+AGG | 0.498294 | 4.3:+27869214 | MS.gene56436:intron |
| AATTACTAACCTGGTGATGA+AGG | 0.503755 | 4.3:-27869275 | None:intergenic |
| CATGATGGAGAATATTGAAA+AGG | 0.507884 | 4.3:+27864826 | MS.gene56436:CDS |
| TTGTGTTGTTGCGGATGAAA+CGG | 0.512801 | 4.3:+27864488 | MS.gene56436:CDS |
| GCACAAGACTTCAGGAACTC+AGG | 0.526353 | 4.3:+27869542 | MS.gene56436:CDS |
| CTTGATGTAGGTCCTGGACA+GGG | 0.526403 | 4.3:+27869215 | MS.gene56436:intron |
| CGATTGGGAGGACAATTATG+AGG | 0.534617 | 4.3:-27869643 | None:intergenic |
| GCTTGCTAAGGTGAAGGCTC+AGG | 0.546240 | 4.3:+27864784 | MS.gene56436:CDS |
| CAAGCTTACTCACCTCCTCC+GGG | 0.549863 | 4.3:-27864766 | None:intergenic |
| AACGGTTGGAAGACAAGTGC+CGG | 0.560243 | 4.3:+27864506 | MS.gene56436:CDS |
| TTTGTTGCGAAATATGGTGG+TGG | 0.569761 | 4.3:+27864558 | MS.gene56436:CDS |
| CTGAAGGCATTGAAAAGCGA+TGG | 0.572755 | 4.3:-27864104 | None:intergenic |
| ATTATCGACGAGGTAATTGA+AGG | 0.574959 | 4.3:-27864176 | None:intergenic |
| AAATTCACTTACAATTGTGA+TGG | 0.582315 | 4.3:+27864148 | MS.gene56436:CDS |
| TGATGTAGGTCCTGGACAGG+GGG | 0.582640 | 4.3:+27869217 | MS.gene56436:intron |
| TTGTGTTGATCACCCGGAGG+AGG | 0.583937 | 4.3:+27864754 | MS.gene56436:CDS |
| CACAAGACTTCAGGAACTCA+GGG | 0.588787 | 4.3:+27869543 | MS.gene56436:CDS |
| TAGAAGCTGGAAGCTTCTGA+AGG | 0.592334 | 4.3:-27864120 | None:intergenic |
| GACTGAGAACCTTCATCACC+AGG | 0.596496 | 4.3:+27869266 | MS.gene56436:CDS |
| GAGTAAGCTTGCTAAGGTGA+AGG | 0.597551 | 4.3:+27864778 | MS.gene56436:CDS |
| TTGATGTAGGTCCTGGACAG+GGG | 0.598139 | 4.3:+27869216 | MS.gene56436:intron |
| TTGTTGCGAAATATGGTGGT+GGG | 0.599780 | 4.3:+27864559 | MS.gene56436:CDS |
| GCAGTATTGTGTTGATCACC+CGG | 0.599904 | 4.3:+27864748 | MS.gene56436:CDS |
| TGAAGTGAAAGGTGTCATGA+TGG | 0.602006 | 4.3:+27864811 | MS.gene56436:CDS |
| GGAGGTGAGTAAGCTTGCTA+AGG | 0.602293 | 4.3:+27864772 | MS.gene56436:CDS |
| TATTCTTAAGAACGATTGGG+AGG | 0.607627 | 4.3:-27869655 | None:intergenic |
| GTTGTTGCGGATGAAACGGT+TGG | 0.620353 | 4.3:+27864492 | MS.gene56436:CDS |
| GCTCAGGTGTCTGAAGTGAA+AGG | 0.620623 | 4.3:+27864800 | MS.gene56436:CDS |
| TGTAGCGTATTGTGTTGTTG+CGG | 0.643271 | 4.3:+27864479 | MS.gene56436:intron |
| TGCGAAATATGGTGGTGGGA+AGG | 0.648574 | 4.3:+27864563 | MS.gene56436:CDS |
| CACTGTAGCCATTATCGACG+AGG | 0.659682 | 4.3:-27864186 | None:intergenic |
| TCTGAATACACCGAATTCAG+CGG | 0.660683 | 4.3:+27864070 | MS.gene56436:CDS |
| ATCTACGCTTTCGTTTCTCG+CGG | 0.661937 | 4.3:+27864034 | MS.gene56436:CDS |
| GGTTGGAAGACAAGTGCCGG+TGG | 0.663656 | 4.3:+27864509 | MS.gene56436:CDS |
| ACACGTTCCAGAAAAGCCAC+CGG | 0.669559 | 4.3:-27864525 | None:intergenic |
| GATGTAGGTCCTGGACAGGG+GGG | 0.679259 | 4.3:+27869218 | MS.gene56436:intron |
| GTATTGTGTTGATCACCCGG+AGG | 0.776651 | 4.3:+27864751 | MS.gene56436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTAAAAAATAATAACT+TGG | - | chr4.3:27866316-27866335 | None:intergenic | 10.0% |
| !! | AAAGTAAAAAATAATAACTT+GGG | - | chr4.3:27866315-27866334 | None:intergenic | 10.0% |
| !! | TAAAGTAAAAAAAATAGTAA+CGG | - | chr4.3:27866752-27866771 | None:intergenic | 10.0% |
| !!! | ATTCTCTTTTTTTATTTATT+TGG | + | chr4.3:27867788-27867807 | MS.gene56436:intron | 10.0% |
| !!! | TTATTATTAAAAGTGATTTT+AGG | + | chr4.3:27864352-27864371 | MS.gene56436:intron | 10.0% |
| !!! | TTTTACAAAAATAGAAAATA+CGG | + | chr4.3:27864967-27864986 | MS.gene56436:intron | 10.0% |
| !! | AAAGTAAAAAAAATAGTAAC+GGG | - | chr4.3:27866751-27866770 | None:intergenic | 15.0% |
| !! | AAATAAATCACGATTAAAAT+TGG | - | chr4.3:27864233-27864252 | None:intergenic | 15.0% |
| !! | AGTATATAACTTAATTGTTT+AGG | + | chr4.3:27868314-27868333 | MS.gene56436:intron | 15.0% |
| !! | TATAAAATGTCCTTTATTAA+TGG | - | chr4.3:27866810-27866829 | None:intergenic | 15.0% |
| !! | TTATTATATAAAATTGCACT+TGG | + | chr4.3:27866025-27866044 | MS.gene56436:intron | 15.0% |
| !!! | AAAAACATTCAAATTTTAGA+GGG | - | chr4.3:27865562-27865581 | None:intergenic | 15.0% |
| !!! | AAATGAACAAATTTTGATTT+TGG | - | chr4.3:27865968-27865987 | None:intergenic | 15.0% |
| !!! | AAATGATCAAATTTTGATTT+TGG | - | chr4.3:27865872-27865891 | None:intergenic | 15.0% |
| !!! | ATTAAAAATATTTGAAGCTA+AGG | + | chr4.3:27868896-27868915 | MS.gene56436:intron | 15.0% |
| !!! | CATATTACTTTTTATGTTTT+TGG | + | chr4.3:27866108-27866127 | MS.gene56436:intron | 15.0% |
| !!! | CATTTTTTTATGATAAATGA+TGG | + | chr4.3:27869379-27869398 | MS.gene56436:intron | 15.0% |
| !!! | TACTGATATAACTAATTTTT+AGG | - | chr4.3:27864313-27864332 | None:intergenic | 15.0% |
| !!! | TTTCTACATAATTTAGTTTT+TGG | - | chr4.3:27868922-27868941 | None:intergenic | 15.0% |
| !! | AGCATAAAAAATTTCAAAAC+TGG | - | chr4.3:27867181-27867200 | None:intergenic | 20.0% |
| !! | GAGAAAATTATAGTAAAATG+AGG | - | chr4.3:27867590-27867609 | None:intergenic | 20.0% |
| !! | GCATTAATTTCATAAAATAC+TGG | - | chr4.3:27865080-27865099 | None:intergenic | 20.0% |
| !! | TATAACTTAATTGTTTAGGT+TGG | + | chr4.3:27868318-27868337 | MS.gene56436:intron | 20.0% |
| !! | TATCTAAATTCTTACTCTTT+CGG | + | chr4.3:27865450-27865469 | MS.gene56436:intron | 20.0% |
| !! | TGTGATTTGATATTTAATTG+TGG | + | chr4.3:27864701-27864720 | MS.gene56436:intron | 20.0% |
| !! | TTAAATACAATAGTAATCGT+GGG | + | chr4.3:27866521-27866540 | MS.gene56436:intron | 20.0% |
| !! | TTAGAAAATATGGTTCAATA+AGG | + | chr4.3:27868615-27868634 | MS.gene56436:intron | 20.0% |
| !!! | AGATTTTATGGAAGTTTTTT+TGG | + | chr4.3:27868791-27868810 | MS.gene56436:intron | 20.0% |
| !!! | AGTTTTGAAATTTTTTATGC+TGG | + | chr4.3:27867180-27867199 | MS.gene56436:intron | 20.0% |
| !!! | ATCTCATTATTCTAAAACAA+GGG | + | chr4.3:27867451-27867470 | MS.gene56436:intron | 20.0% |
| !!! | ATTAAAAGTGATTTTAGGTT+AGG | + | chr4.3:27864357-27864376 | MS.gene56436:intron | 20.0% |
| !!! | CAAAAACATTCAAATTTTAG+AGG | - | chr4.3:27865563-27865582 | None:intergenic | 20.0% |
| !!! | CTCTAAAATTTGAATGTTTT+TGG | + | chr4.3:27865561-27865580 | MS.gene56436:intron | 20.0% |
| !!! | TAAGTTACTTTTGTTCTAAA+TGG | + | chr4.3:27868380-27868399 | MS.gene56436:intron | 20.0% |
| !!! | TCAGATTGATTTAGAAAATA+TGG | + | chr4.3:27868605-27868624 | MS.gene56436:intron | 20.0% |
| !!! | TTAAAAGTGATTTTAGGTTA+GGG | + | chr4.3:27864358-27864377 | MS.gene56436:intron | 20.0% |
| !!! | TTAAAGGAAAAGAATTTTCA+TGG | + | chr4.3:27865793-27865812 | MS.gene56436:intron | 20.0% |
| !!! | TTAGATCTAGATAGATTTTA+TGG | + | chr4.3:27868779-27868798 | MS.gene56436:intron | 20.0% |
| !!! | TTTTTAGTCATTGTAAAATG+AGG | + | chr4.3:27865515-27865534 | MS.gene56436:intron | 20.0% |
| ! | AAATTCACTTACAATTGTGA+TGG | + | chr4.3:27864148-27864167 | MS.gene56436:CDS | 25.0% |
| ! | AAGAAACTTTGATTGTTAGA+GGG | + | chr4.3:27865763-27865782 | MS.gene56436:intron | 25.0% |
| ! | AATGTCCTTTATTAATGGTA+TGG | - | chr4.3:27866805-27866824 | None:intergenic | 25.0% |
| ! | ATACACAATAAACCAAAAGA+TGG | - | chr4.3:27868459-27868478 | None:intergenic | 25.0% |
| ! | ATGTTTGTTTCATGCAATAA+AGG | - | chr4.3:27868239-27868258 | None:intergenic | 25.0% |
| ! | ATTTGATATTTAATTGTGGC+AGG | + | chr4.3:27864705-27864724 | MS.gene56436:intron | 25.0% |
| ! | CAAAACTTTCAAAGTTTGAA+AGG | + | chr4.3:27865830-27865849 | MS.gene56436:intron | 25.0% |
| ! | CAAAAGCTGCAAATAAATAA+GGG | + | chr4.3:27867959-27867978 | MS.gene56436:intron | 25.0% |
| ! | CAATTATGAAACATCAAATC+AGG | - | chr4.3:27869159-27869178 | None:intergenic | 25.0% |
| ! | CCATATGTATTGTATAGAAA+AGG | + | chr4.3:27869063-27869082 | MS.gene56436:intron | 25.0% |
| ! | CTAAAGTGGCATATAAATTT+GGG | + | chr4.3:27866892-27866911 | MS.gene56436:intron | 25.0% |
| ! | CTTTGGTTAGAAATATTAGT+GGG | + | chr4.3:27867317-27867336 | MS.gene56436:intron | 25.0% |
| ! | GTCCAATTAGACATTAAAAT+CGG | - | chr4.3:27867238-27867257 | None:intergenic | 25.0% |
| ! | GTTAAATACAATAGTAATCG+TGG | + | chr4.3:27866520-27866539 | MS.gene56436:intron | 25.0% |
| ! | GTTAGAGGGATAAAAATTAA+AGG | + | chr4.3:27865777-27865796 | MS.gene56436:intron | 25.0% |
| ! | GTTTATTGTGTATTTCATTG+TGG | + | chr4.3:27868466-27868485 | MS.gene56436:intron | 25.0% |
| ! | TAAAGTGGCATATAAATTTG+GGG | + | chr4.3:27866893-27866912 | MS.gene56436:intron | 25.0% |
| ! | TTCATGCAATAAAGGAAATT+TGG | - | chr4.3:27868231-27868250 | None:intergenic | 25.0% |
| ! | TTTATGTGAAATTGCTAAAG+TGG | + | chr4.3:27866878-27866897 | MS.gene56436:intron | 25.0% |
| ! | TTTATTACCTAATGAAGTAG+TGG | + | chr4.3:27868270-27868289 | MS.gene56436:intron | 25.0% |
| ! | TTTGATCACAACTTTGAATA+TGG | - | chr4.3:27868535-27868554 | None:intergenic | 25.0% |
| ! | TTTGGTTAGAAATATTAGTG+GGG | + | chr4.3:27867318-27867337 | MS.gene56436:intron | 25.0% |
| !! | ACTACATACTCATTATGTTT+TGG | + | chr4.3:27867883-27867902 | MS.gene56436:intron | 25.0% |
| !! | CCTTTTCTATACAATACATA+TGG | - | chr4.3:27869066-27869085 | None:intergenic | 25.0% |
| !! | GTTTTCCATACCATTAATAA+AGG | + | chr4.3:27866797-27866816 | MS.gene56436:intron | 25.0% |
| !! | TCGATTTGAAGAAAAAAAAC+AGG | - | chr4.3:27869490-27869509 | None:intergenic | 25.0% |
| !! | TTGATAGTTATTATGAGACA+GGG | - | chr4.3:27866186-27866205 | None:intergenic | 25.0% |
| !! | TTTGATAGTTATTATGAGAC+AGG | - | chr4.3:27866187-27866206 | None:intergenic | 25.0% |
| !!! | AGATGAGCAAATTTTGATTT+TGG | - | chr4.3:27865922-27865941 | None:intergenic | 25.0% |
| !!! | ATTGTTTAGGTTGGATTTTA+AGG | + | chr4.3:27868327-27868346 | MS.gene56436:intron | 25.0% |
| !!! | GAAAGTTTTGCTTTTAGTTT+AGG | - | chr4.3:27865820-27865839 | None:intergenic | 25.0% |
| !!! | GATCTCATTATTCTAAAACA+AGG | + | chr4.3:27867450-27867469 | MS.gene56436:intron | 25.0% |
| !!! | TGTTTTCTTATCTTTGAAGT+GGG | - | chr4.3:27867041-27867060 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTTGTGTTCAAT+TGG | + | chr4.3:27868025-27868044 | MS.gene56436:intron | 25.0% |
| !!! | TTGTGATTTTTGTTGTTGAT+GGG | + | chr4.3:27864671-27864690 | MS.gene56436:intron | 25.0% |
| !!! | TTGTTTAGGTTGGATTTTAA+GGG | + | chr4.3:27868328-27868347 | MS.gene56436:intron | 25.0% |
| !!! | TTGTTTTCTTATCTTTGAAG+TGG | - | chr4.3:27867042-27867061 | None:intergenic | 25.0% |
| !!! | TTTTCTAAAACTCAAAAGTC+CGG | + | chr4.3:27865227-27865246 | MS.gene56436:intron | 25.0% |
| AACAGCTTGAATAAGGAATT+TGG | + | chr4.3:27864603-27864622 | MS.gene56436:CDS | 30.0% | |
| AACATTCGTATCGTATGTAA+AGG | - | chr4.3:27865023-27865042 | None:intergenic | 30.0% | |
| AATCAAAGTTTCTTGGTACT+TGG | - | chr4.3:27865757-27865776 | None:intergenic | 30.0% | |
| AATGCATTCAATCTGAAAAG+AGG | - | chr4.3:27868137-27868156 | None:intergenic | 30.0% | |
| AATTAGACATTAAAATCGGC+TGG | - | chr4.3:27867234-27867253 | None:intergenic | 30.0% | |
| AATTCCTTATTCAAGCTGTT+AGG | - | chr4.3:27864603-27864622 | None:intergenic | 30.0% | |
| AATTGGTTGTACACCTAATT+TGG | + | chr4.3:27868042-27868061 | MS.gene56436:intron | 30.0% | |
| ACACGTGTAAGAGATATATT+AGG | + | chr4.3:27865482-27865501 | MS.gene56436:intron | 30.0% | |
| ACAGCTTGAATAAGGAATTT+GGG | + | chr4.3:27864604-27864623 | MS.gene56436:CDS | 30.0% | |
| ACCATTATTGGGTATCAATA+AGG | - | chr4.3:27865650-27865669 | None:intergenic | 30.0% | |
| ACTTTGAATATGGAATTCAG+AGG | - | chr4.3:27868525-27868544 | None:intergenic | 30.0% | |
| AGAAAAAAACCATGAGAAGT+CGG | - | chr4.3:27868740-27868759 | None:intergenic | 30.0% | |
| AGTTAGCTGGTGATATATAA+TGG | - | chr4.3:27865593-27865612 | None:intergenic | 30.0% | |
| ATATTGTACTTCTGTAGCAT+AGG | + | chr4.3:27867612-27867631 | MS.gene56436:intron | 30.0% | |
| ATCTATCCTTAAGTTCTTTC+AGG | + | chr4.3:27868657-27868676 | MS.gene56436:intron | 30.0% | |
| ATTGGTTGTACACCTAATTT+GGG | + | chr4.3:27868043-27868062 | MS.gene56436:intron | 30.0% | |
| CAACAAAACATAGACAATGT+GGG | - | chr4.3:27868161-27868180 | None:intergenic | 30.0% | |
| CAAGAAACTTTGATTGTTAG+AGG | + | chr4.3:27865762-27865781 | MS.gene56436:intron | 30.0% | |
| CCAAAAGCTGCAAATAAATA+AGG | + | chr4.3:27867958-27867977 | MS.gene56436:intron | 30.0% | |
| CCATTATTGGGTATCAATAA+GGG | - | chr4.3:27865649-27865668 | None:intergenic | 30.0% | |
| CCTTTGGTTAGAAATATTAG+TGG | + | chr4.3:27867316-27867335 | MS.gene56436:intron | 30.0% | |
| CGAATATAAAGAGAAATTGC+AGG | + | chr4.3:27867012-27867031 | MS.gene56436:intron | 30.0% | |
| CTCTAACAATCAAAGTTTCT+TGG | - | chr4.3:27865764-27865783 | None:intergenic | 30.0% | |
| GAAGATAAAGCTGATTGTAT+TGG | + | chr4.3:27869601-27869620 | MS.gene56436:CDS | 30.0% | |
| GCTAAAGTGGCATATAAATT+TGG | + | chr4.3:27866891-27866910 | MS.gene56436:intron | 30.0% | |
| TACTAGTTAGATGGTACATT+TGG | - | chr4.3:27866278-27866297 | None:intergenic | 30.0% | |
| TAGTCTAGTTACCAGTTATA+TGG | + | chr4.3:27868698-27868717 | MS.gene56436:intron | 30.0% | |
| TCAATCATGTAGTGATAAAG+TGG | - | chr4.3:27867399-27867418 | None:intergenic | 30.0% | |
| TGAACATTGTACTAGTTAGA+TGG | - | chr4.3:27866287-27866306 | None:intergenic | 30.0% | |
| TGATAGTTATTATGAGACAG+GGG | - | chr4.3:27866185-27866204 | None:intergenic | 30.0% | |
| TTAGAGAGATAAAGAGTTGT+AGG | - | chr4.3:27867354-27867373 | None:intergenic | 30.0% | |
| TTAGTAATTGTGTGATTGGA+AGG | + | chr4.3:27869289-27869308 | MS.gene56436:intron | 30.0% | |
| TTCATACTGCACAATTCATT+AGG | + | chr4.3:27865152-27865171 | MS.gene56436:intron | 30.0% | |
| TTGAAAGTCATAAGAGTCTT+TGG | + | chr4.3:27865181-27865200 | MS.gene56436:intron | 30.0% | |
| TTGCTAGAATGACATAATCT+GGG | - | chr4.3:27866671-27866690 | None:intergenic | 30.0% | |
| TTGGTTAGAAATATTAGTGG+GGG | + | chr4.3:27867319-27867338 | MS.gene56436:intron | 30.0% | |
| TTTGCTAGAATGACATAATC+TGG | - | chr4.3:27866672-27866691 | None:intergenic | 30.0% | |
| ! | ACATGTTTGAAACTTGATGT+AGG | + | chr4.3:27869203-27869222 | MS.gene56436:intron | 30.0% |
| ! | AGAAAAAGCAGTCAAGTTTT+TGG | + | chr4.3:27869126-27869145 | MS.gene56436:intron | 30.0% |
| ! | ATTGTTTTCAGCCATATAAC+TGG | - | chr4.3:27868712-27868731 | None:intergenic | 30.0% |
| ! | CATGATGGAGAATATTGAAA+AGG | + | chr4.3:27864826-27864845 | MS.gene56436:CDS | 30.0% |
| ! | CCACTAATATTTCTAACCAA+AGG | - | chr4.3:27867319-27867338 | None:intergenic | 30.0% |
| ! | GATGATTTTGTTGCGAAATA+TGG | + | chr4.3:27864552-27864571 | MS.gene56436:CDS | 30.0% |
| ! | GTTCTAGTTATGATTACCTT+TGG | + | chr4.3:27867300-27867319 | MS.gene56436:intron | 30.0% |
| ! | TTCATTTTACAGCTCAAGAA+AGG | - | chr4.3:27865708-27865727 | None:intergenic | 30.0% |
| ! | TTGTTCTAAATGGAGATAGA+AGG | + | chr4.3:27868390-27868409 | MS.gene56436:intron | 30.0% |
| ! | TTTTAATGTCTAATTGGACC+AGG | + | chr4.3:27867239-27867258 | MS.gene56436:intron | 30.0% |
| !! | AAAATGGATTGACTGGATAA+TGG | - | chr4.3:27867101-27867120 | None:intergenic | 30.0% |
| !! | AAAGTGACACTCTTTTAAGA+CGG | - | chr4.3:27866224-27866243 | None:intergenic | 30.0% |
| !! | AGAAATGAAAATGGATTGAC+TGG | - | chr4.3:27867108-27867127 | None:intergenic | 30.0% |
| !! | AGCCGATTTTAATGTCTAAT+TGG | + | chr4.3:27867233-27867252 | MS.gene56436:intron | 30.0% |
| !! | ATTTTAAGGGAGCTAATGAT+AGG | + | chr4.3:27868341-27868360 | MS.gene56436:intron | 30.0% |
| !! | CCTTATTTATTTGCAGCTTT+TGG | - | chr4.3:27867961-27867980 | None:intergenic | 30.0% |
| !! | CTGTTTTCATTTTTCTGCTA+CGG | + | chr4.3:27867529-27867548 | MS.gene56436:intron | 30.0% |
| !! | GGTTTGTTAACTACAATAAC+CGG | + | chr4.3:27867138-27867157 | MS.gene56436:intron | 30.0% |
| !! | GTGAGTTTGATGATGATTTA+GGG | + | chr4.3:27864644-27864663 | MS.gene56436:intron | 30.0% |
| !! | TCTATGTTTTGTTGGTGTTT+GGG | + | chr4.3:27868167-27868186 | MS.gene56436:intron | 30.0% |
| !! | TGTGAGTTTGATGATGATTT+AGG | + | chr4.3:27864643-27864662 | MS.gene56436:intron | 30.0% |
| !! | TTTTAAGGGAGCTAATGATA+GGG | + | chr4.3:27868342-27868361 | MS.gene56436:intron | 30.0% |
| !!! | GCTTCTATTTTTATTGCTCA+TGG | + | chr4.3:27868850-27868869 | MS.gene56436:intron | 30.0% |
| !!! | GTTGTGATTTTTGTTGTTGA+TGG | + | chr4.3:27864670-27864689 | MS.gene56436:intron | 30.0% |
| !!! | TTCTAACTTGCTGTTTTATG+AGG | + | chr4.3:27869516-27869535 | MS.gene56436:intron | 30.0% |
| AACCTTCCTTATCCCAAATT+AGG | - | chr4.3:27868058-27868077 | None:intergenic | 35.0% | |
| AAGAGGAATGCAAACTTAGT+CGG | - | chr4.3:27868120-27868139 | None:intergenic | 35.0% | |
| ACAATAAACCAAAAGATGGC+AGG | - | chr4.3:27868455-27868474 | None:intergenic | 35.0% | |
| ACATCATCCACTACTTCATT+AGG | - | chr4.3:27868280-27868299 | None:intergenic | 35.0% | |
| ACCTATTAACAGTCAAACCT+TGG | + | chr4.3:27866938-27866957 | MS.gene56436:intron | 35.0% | |
| AGATCTTTACCATAACACTC+GGG | - | chr4.3:27869409-27869428 | None:intergenic | 35.0% | |
| AGGAAGTGATAATCGAAACA+TGG | - | chr4.3:27868494-27868513 | None:intergenic | 35.0% | |
| ATACAATAGTAATCGTGGGA+CGG | + | chr4.3:27866525-27866544 | MS.gene56436:intron | 35.0% | |
| ATGACACCACAACCATTATT+GGG | - | chr4.3:27865661-27865680 | None:intergenic | 35.0% | |
| ATTATATGATGCGAGCTGAA+TGG | + | chr4.3:27864876-27864895 | MS.gene56436:intron | 35.0% | |
| ATTATCGACGAGGTAATTGA+AGG | - | chr4.3:27864179-27864198 | None:intergenic | 35.0% | |
| CAATCACACAATTACTAACC+TGG | - | chr4.3:27869287-27869306 | None:intergenic | 35.0% | |
| CAGGTTAGTAATTGTGTGAT+TGG | + | chr4.3:27869285-27869304 | MS.gene56436:intron | 35.0% | |
| CATGTAGTGATAAAGTGGTT+TGG | - | chr4.3:27867394-27867413 | None:intergenic | 35.0% | |
| CCAACAAAACATAGACAATG+TGG | - | chr4.3:27868162-27868181 | None:intergenic | 35.0% | |
| CCCTTATTGATACCCAATAA+TGG | + | chr4.3:27865646-27865665 | MS.gene56436:intron | 35.0% | |
| CTCTTCTACTTTAACCTAAG+AGG | + | chr4.3:27864853-27864872 | MS.gene56436:intron | 35.0% | |
| CTGCTTATGGGTCTAATAAA+AGG | + | chr4.3:27865611-27865630 | MS.gene56436:intron | 35.0% | |
| GAGATCTTTACCATAACACT+CGG | - | chr4.3:27869410-27869429 | None:intergenic | 35.0% | |
| GATAGTTATTATGAGACAGG+GGG | - | chr4.3:27866184-27866203 | None:intergenic | 35.0% | |
| GCATTTCGATTGCATATTGA+AGG | + | chr4.3:27869016-27869035 | MS.gene56436:intron | 35.0% | |
| GTAATCATAACTAGAACAGC+CGG | - | chr4.3:27867297-27867316 | None:intergenic | 35.0% | |
| TAAACAGAAAACCCAAGACT+CGG | - | chr4.3:27865289-27865308 | None:intergenic | 35.0% | |
| TAGAATGACATAATCTGGGA+CGG | - | chr4.3:27866667-27866686 | None:intergenic | 35.0% | |
| TATTGGGTATCAATAAGGGA+TGG | - | chr4.3:27865645-27865664 | None:intergenic | 35.0% | |
| TCCAAGGTTTGACTGTTAAT+AGG | - | chr4.3:27866942-27866961 | None:intergenic | 35.0% | |
| TCGCATCATATAATCCTCTT+AGG | - | chr4.3:27864870-27864889 | None:intergenic | 35.0% | |
| TGAATTTATTGCACCCCTAT+GGG | - | chr4.3:27868588-27868607 | None:intergenic | 35.0% | |
| TGGTTAGAAATATTAGTGGG+GGG | + | chr4.3:27867320-27867339 | MS.gene56436:intron | 35.0% | |
| TTAACAGTCAAACCTTGGAA+TGG | + | chr4.3:27866943-27866962 | MS.gene56436:intron | 35.0% | |
| TTCAATTACCTCGTCGATAA+TGG | + | chr4.3:27864178-27864197 | MS.gene56436:CDS | 35.0% | |
| TTGATACCCAATAATGGTTG+TGG | + | chr4.3:27865652-27865671 | MS.gene56436:intron | 35.0% | |
| TTTGCTTCTTCTGTGTGAAA+TGG | + | chr4.3:27866498-27866517 | MS.gene56436:intron | 35.0% | |
| ! | AAGCGTAGATCAGAGATTTT+TGG | - | chr4.3:27864024-27864043 | None:intergenic | 35.0% |
| ! | AATTACTAACCTGGTGATGA+AGG | - | chr4.3:27869278-27869297 | None:intergenic | 35.0% |
| ! | AATTTGCCTTTTCCATTCCA+AGG | - | chr4.3:27866958-27866977 | None:intergenic | 35.0% |
| ! | CCACATTGTCTATGTTTTGT+TGG | + | chr4.3:27868159-27868178 | MS.gene56436:intron | 35.0% |
| ! | GATTTTGTTGCGAAATATGG+TGG | + | chr4.3:27864555-27864574 | MS.gene56436:CDS | 35.0% |
| ! | GCATTTTGCTCATGTTGTAT+TGG | + | chr4.3:27865098-27865117 | MS.gene56436:intron | 35.0% |
| ! | TGCATGTGTTCCTTCAATTT+TGG | - | chr4.3:27864731-27864750 | None:intergenic | 35.0% |
| ! | TGTACACCTAATTTGGGATA+AGG | + | chr4.3:27868049-27868068 | MS.gene56436:intron | 35.0% |
| !! | AATTGCACTTGGCTTTTGAA+AGG | + | chr4.3:27866036-27866055 | MS.gene56436:intron | 35.0% |
| !! | CTCTCTACTTTTCTTCTGAT+AGG | - | chr4.3:27869108-27869127 | None:intergenic | 35.0% |
| !! | GTCTATGTTTTGTTGGTGTT+TGG | + | chr4.3:27868166-27868185 | MS.gene56436:intron | 35.0% |
| !! | GTGAATTTGTTGTTAGAAGC+TGG | - | chr4.3:27864136-27864155 | None:intergenic | 35.0% |
| !! | TAGTGATAAAGTGGTTTGGT+AGG | - | chr4.3:27867390-27867409 | None:intergenic | 35.0% |
| !! | TTTTCATTTTTCTGCTACGG+AGG | + | chr4.3:27867532-27867551 | MS.gene56436:intron | 35.0% |
| !!! | TTCAGTTTTGTGTACTGACT+AGG | - | chr4.3:27866982-27867001 | None:intergenic | 35.0% |
| AGCTGGTGATATATAATGGC+AGG | - | chr4.3:27865589-27865608 | None:intergenic | 40.0% | |
| ATAAGAACCGGACTACAAGT+TGG | - | chr4.3:27867210-27867229 | None:intergenic | 40.0% | |
| ATCACCAGCTAACTGCTTAT+GGG | + | chr4.3:27865599-27865618 | MS.gene56436:intron | 40.0% | |
| ATCCCACACAAAAGATGAGT+CGG | + | chr4.3:27869443-27869462 | MS.gene56436:intron | 40.0% | |
| ATGTCTTCTTAACCGAGTCT+TGG | + | chr4.3:27865274-27865293 | MS.gene56436:intron | 40.0% | |
| CACACGCACAGAAATGAAAA+TGG | - | chr4.3:27867117-27867136 | None:intergenic | 40.0% | |
| CATATCCCACTAAGTGTGAT+CGG | + | chr4.3:27866414-27866433 | MS.gene56436:intron | 40.0% | |
| CATGACACCACAACCATTAT+TGG | - | chr4.3:27865662-27865681 | None:intergenic | 40.0% | |
| CCAAAATCCGCAGAAAAATG+TGG | + | chr4.3:27869567-27869586 | MS.gene56436:CDS | 40.0% | |
| CGATAGCCTGAAAGAACTTA+AGG | - | chr4.3:27868666-27868685 | None:intergenic | 40.0% | |
| CTAGCAAGCATTTGTAGACA+TGG | + | chr4.3:27868978-27868997 | MS.gene56436:intron | 40.0% | |
| CTGAATTTATTGCACCCCTA+TGG | - | chr4.3:27868589-27868608 | None:intergenic | 40.0% | |
| CTTCCATTTCTTAGACTCTG+AGG | - | chr4.3:27867661-27867680 | None:intergenic | 40.0% | |
| GAACTACGATTACGCTAGAT+CGG | - | chr4.3:27864261-27864280 | None:intergenic | 40.0% | |
| GCTGGTGATATATAATGGCA+GGG | - | chr4.3:27865588-27865607 | None:intergenic | 40.0% | |
| GGGTCTAATAAAAGGTCATC+TGG | + | chr4.3:27865619-27865638 | MS.gene56436:intron | 40.0% | |
| GGTACTTGGCAATTACTTCA+GGG | - | chr4.3:27865743-27865762 | None:intergenic | 40.0% | |
| GGTTAGAAATATTAGTGGGG+GGG | + | chr4.3:27867321-27867340 | MS.gene56436:intron | 40.0% | |
| GGTTCAATAAGGATGTTGTC+TGG | + | chr4.3:27868626-27868645 | MS.gene56436:intron | 40.0% | |
| GTCAAACCTTGGAATGGAAA+AGG | + | chr4.3:27866949-27866968 | MS.gene56436:intron | 40.0% | |
| GTTGAAGTTTCCGCTGAATT+CGG | - | chr4.3:27864083-27864102 | None:intergenic | 40.0% | |
| TACAATAACCGGTCAATCAC+AGG | + | chr4.3:27867149-27867168 | MS.gene56436:intron | 40.0% | |
| TACAATAGTAATCGTGGGAC+GGG | + | chr4.3:27866526-27866545 | MS.gene56436:intron | 40.0% | |
| TATCACCAGCTAACTGCTTA+TGG | + | chr4.3:27865598-27865617 | MS.gene56436:intron | 40.0% | |
| TCTGAATACACCGAATTCAG+CGG | + | chr4.3:27864070-27864089 | MS.gene56436:CDS | 40.0% | |
| TGCACCTAACAGCTTGAATA+AGG | + | chr4.3:27864596-27864615 | MS.gene56436:CDS | 40.0% | |
| TGGTACTTGGCAATTACTTC+AGG | - | chr4.3:27865744-27865763 | None:intergenic | 40.0% | |
| TGGTTTACCAACTTGTAGTC+CGG | + | chr4.3:27867200-27867219 | MS.gene56436:intron | 40.0% | |
| TGTCTTCTTAACCGAGTCTT+GGG | + | chr4.3:27865275-27865294 | MS.gene56436:intron | 40.0% | |
| TGTTCGATGTCCACAAACAT+GGG | + | chr4.3:27867743-27867762 | MS.gene56436:intron | 40.0% | |
| TTGAAACTTGATGTAGGTCC+TGG | + | chr4.3:27869209-27869228 | MS.gene56436:intron | 40.0% | |
| TTGTTGCGAAATATGGTGGT+GGG | + | chr4.3:27864559-27864578 | MS.gene56436:CDS | 40.0% | |
| TTTGTTGCGAAATATGGTGG+TGG | + | chr4.3:27864558-27864577 | MS.gene56436:CDS | 40.0% | |
| ! | AAAAGAGAGTGCAGAATGAG+TGG | - | chr4.3:27867491-27867510 | None:intergenic | 40.0% |
| ! | AAAGAGAGTGCAGAATGAGT+GGG | - | chr4.3:27867490-27867509 | None:intergenic | 40.0% |
| ! | AGAGTCTTTGGAGAGACAAA+AGG | + | chr4.3:27865193-27865212 | MS.gene56436:intron | 40.0% |
| ! | AGTCTTTGGAGAGACAAAAG+GGG | + | chr4.3:27865195-27865214 | MS.gene56436:intron | 40.0% |
| ! | ATCTTCAAGTGCTGTTGATG+GGG | + | chr4.3:27868428-27868447 | MS.gene56436:intron | 40.0% |
| ! | CACCTAATTTGGGATAAGGA+AGG | + | chr4.3:27868053-27868072 | MS.gene56436:intron | 40.0% |
| ! | CAGCTCAAGAAAGGTTTTTC+AGG | - | chr4.3:27865699-27865718 | None:intergenic | 40.0% |
| ! | CATCTTCAAGTGCTGTTGAT+GGG | + | chr4.3:27868427-27868446 | MS.gene56436:intron | 40.0% |
| ! | CCACATTTTTCTGCGGATTT+TGG | - | chr4.3:27869570-27869589 | None:intergenic | 40.0% |
| ! | GAGTCTTTGGAGAGACAAAA+GGG | + | chr4.3:27865194-27865213 | MS.gene56436:intron | 40.0% |
| ! | GTTTGGTAGGAGGTACATAA+AGG | - | chr4.3:27867377-27867396 | None:intergenic | 40.0% |
| ! | TATGACTCCTGAGTTTGCTT+GGG | + | chr4.3:27867821-27867840 | MS.gene56436:intron | 40.0% |
| ! | TGTAGCGTATTGTGTTGTTG+CGG | + | chr4.3:27864479-27864498 | MS.gene56436:intron | 40.0% |
| ! | TTATGACTCCTGAGTTTGCT+TGG | + | chr4.3:27867820-27867839 | MS.gene56436:intron | 40.0% |
| ! | TTGTGTTGTTGCGGATGAAA+CGG | + | chr4.3:27864488-27864507 | MS.gene56436:CDS | 40.0% |
| ! | TTTGCAGCCACATTTTTCTG+CGG | - | chr4.3:27869577-27869596 | None:intergenic | 40.0% |
| ! | TTTTCATTTCTGTGCGTGTG+TGG | + | chr4.3:27867117-27867136 | MS.gene56436:intron | 40.0% |
| !! | AGGCTTGACACAGTCATTTT+TGG | + | chr4.3:27867632-27867651 | MS.gene56436:intron | 40.0% |
| !! | GGAATTCAGAGGCATCAAAT+AGG | - | chr4.3:27868514-27868533 | None:intergenic | 40.0% |
| !! | TGAAGTGAAAGGTGTCATGA+TGG | + | chr4.3:27864811-27864830 | MS.gene56436:CDS | 40.0% |
| !! | TGATAAAGTGGTTTGGTAGG+AGG | - | chr4.3:27867387-27867406 | None:intergenic | 40.0% |
| !!! | AACTTGCTGTTTTATGAGGC+AGG | + | chr4.3:27869520-27869539 | MS.gene56436:intron | 40.0% |
| !!! | CTTGACACAGTCATTTTTGG+GGG | + | chr4.3:27867635-27867654 | MS.gene56436:intron | 40.0% |
| !!! | GCTTGACACAGTCATTTTTG+GGG | + | chr4.3:27867634-27867653 | MS.gene56436:intron | 40.0% |
| !!! | GGCTTGACACAGTCATTTTT+GGG | + | chr4.3:27867633-27867652 | MS.gene56436:intron | 40.0% |
| AAATCGGCTGGCATAAGAAC+CGG | - | chr4.3:27867222-27867241 | None:intergenic | 45.0% | |
| AAGGAAGGTTCACAAGGACT+AGG | + | chr4.3:27868068-27868087 | MS.gene56436:intron | 45.0% | |
| AATTGGACCAGGCACAGTTA+CGG | + | chr4.3:27867250-27867269 | MS.gene56436:intron | 45.0% | |
| ACTAAGTGTGATCGGCTACA+TGG | + | chr4.3:27866422-27866441 | MS.gene56436:intron | 45.0% | |
| ACTTGAAGATGGAGACGCAA+GGG | - | chr4.3:27868418-27868437 | None:intergenic | 45.0% | |
| AGCTAATGATAGGGTGAGTC+AGG | + | chr4.3:27868351-27868370 | MS.gene56436:intron | 45.0% | |
| AGGAAGGTTCACAAGGACTA+GGG | + | chr4.3:27868069-27868088 | MS.gene56436:intron | 45.0% | |
| ATACGTAACGCAGAACAAGC+CGG | - | chr4.3:27865249-27865268 | None:intergenic | 45.0% | |
| ATCTACGCTTTCGTTTCTCG+CGG | + | chr4.3:27864034-27864053 | MS.gene56436:CDS | 45.0% | |
| ATGTAGCCGATCACACTTAG+TGG | - | chr4.3:27866423-27866442 | None:intergenic | 45.0% | |
| CACAAGACTTCAGGAACTCA+GGG | + | chr4.3:27869543-27869562 | MS.gene56436:CDS | 45.0% | |
| CCACAAACATGGGATAGTGT+AGG | + | chr4.3:27867753-27867772 | MS.gene56436:intron | 45.0% | |
| CCATCAACAGCACTTGAAGA+TGG | - | chr4.3:27868429-27868448 | None:intergenic | 45.0% | |
| CCTACACTATCCCATGTTTG+TGG | - | chr4.3:27867756-27867775 | None:intergenic | 45.0% | |
| CGATCACACTTAGTGGGATA+TGG | - | chr4.3:27866416-27866435 | None:intergenic | 45.0% | |
| CGATTGGGAGGACAATTATG+AGG | - | chr4.3:27869646-27869665 | None:intergenic | 45.0% | |
| CTGTTCGATGTCCACAAACA+TGG | + | chr4.3:27867742-27867761 | MS.gene56436:intron | 45.0% | |
| GAGTCACTTGCTCATGCTAT+CGG | + | chr4.3:27867562-27867581 | MS.gene56436:intron | 45.0% | |
| GCTAATGATAGGGTGAGTCA+GGG | + | chr4.3:27868352-27868371 | MS.gene56436:intron | 45.0% | |
| GGTCAAAACCTGTGATTGAC+CGG | - | chr4.3:27867160-27867179 | None:intergenic | 45.0% | |
| GTATGTAGCCATAGCCCATA+GGG | + | chr4.3:27868571-27868590 | MS.gene56436:intron | 45.0% | |
| TAGAAGCTGGAAGCTTCTGA+AGG | - | chr4.3:27864123-27864142 | None:intergenic | 45.0% | |
| TAGACCCATAAGCAGTTAGC+TGG | - | chr4.3:27865606-27865625 | None:intergenic | 45.0% | |
| TATGTAGCCATAGCCCATAG+GGG | + | chr4.3:27868572-27868591 | MS.gene56436:intron | 45.0% | |
| TCACAAGGACTAGGGTTCAA+GGG | + | chr4.3:27868077-27868096 | MS.gene56436:intron | 45.0% | |
| TCCCACACAAAAGATGAGTC+GGG | + | chr4.3:27869444-27869463 | MS.gene56436:intron | 45.0% | |
| TGGGATAAGGAAGGTTCACA+AGG | + | chr4.3:27868062-27868081 | MS.gene56436:intron | 45.0% | |
| TGTAGCCGATCACACTTAGT+GGG | - | chr4.3:27866422-27866441 | None:intergenic | 45.0% | |
| TTCACAAGGACTAGGGTTCA+AGG | + | chr4.3:27868076-27868095 | MS.gene56436:intron | 45.0% | |
| TTGTGGCAGGCCAAAATTGA+AGG | + | chr4.3:27864718-27864737 | MS.gene56436:intron | 45.0% | |
| ! | AAGAGAGTGCAGAATGAGTG+GGG | - | chr4.3:27867489-27867508 | None:intergenic | 45.0% |
| ! | AATGACATAATCTGGGACGG+AGG | - | chr4.3:27866664-27866683 | None:intergenic | 45.0% |
| ! | ATCTTTTGTGTGGGATGGAG+AGG | - | chr4.3:27869439-27869458 | None:intergenic | 45.0% |
| ! | ATGACATAATCTGGGACGGA+GGG | - | chr4.3:27866663-27866682 | None:intergenic | 45.0% |
| ! | CCATCTTCAAGTGCTGTTGA+TGG | + | chr4.3:27868426-27868445 | MS.gene56436:intron | 45.0% |
| ! | GACTCATCTTTTGTGTGGGA+TGG | - | chr4.3:27869444-27869463 | None:intergenic | 45.0% |
| ! | GCAGTATTGTGTTGATCACC+CGG | + | chr4.3:27864748-27864767 | MS.gene56436:CDS | 45.0% |
| ! | GGGGGAAAAGATAGAGCTTT+TGG | + | chr4.3:27869236-27869255 | MS.gene56436:CDS | 45.0% |
| ! | GTCTTTGGAGAGACAAAAGG+GGG | + | chr4.3:27865196-27865215 | MS.gene56436:intron | 45.0% |
| !! | AAAGGTACCCAAGCAAACTC+AGG | - | chr4.3:27867831-27867850 | None:intergenic | 45.0% |
| !! | CTGAAGGCATTGAAAAGCGA+TGG | - | chr4.3:27864107-27864126 | None:intergenic | 45.0% |
| !! | GAGTAAGCTTGCTAAGGTGA+AGG | + | chr4.3:27864778-27864797 | MS.gene56436:CDS | 45.0% |
| !! | AAAAAAAAAAAACATAATAA+AGG | - | chr4.3:27867849-27867868 | None:intergenic | 5.0% |
| !! | TATATAATAAATACTATATT+GGG | - | chr4.3:27866015-27866034 | None:intergenic | 5.0% |
| !! | TATTATAGAAAATAATATAA+TGG | - | chr4.3:27867701-27867720 | None:intergenic | 5.0% |
| !! | TTAAATATAACAAAAAAAAT+TGG | + | chr4.3:27868006-27868025 | MS.gene56436:intron | 5.0% |
| !! | TTATATAATAAATACTATAT+TGG | - | chr4.3:27866016-27866035 | None:intergenic | 5.0% |
| !!! | TTATGTTTTTTTTTTTTTTT+TGG | + | chr4.3:27867852-27867871 | MS.gene56436:intron | 5.0% |
| AACGGTTGGAAGACAAGTGC+CGG | + | chr4.3:27864506-27864525 | MS.gene56436:CDS | 50.0% | |
| ACACGTTCCAGAAAAGCCAC+CGG | - | chr4.3:27864528-27864547 | None:intergenic | 50.0% | |
| ACTTCGCGGTCTCACTTACT+AGG | - | chr4.3:27865049-27865068 | None:intergenic | 50.0% | |
| ACTTGATGTAGGTCCTGGAC+AGG | + | chr4.3:27869214-27869233 | MS.gene56436:intron | 50.0% | |
| CACAAGGACTAGGGTTCAAG+GGG | + | chr4.3:27868078-27868097 | MS.gene56436:intron | 50.0% | |
| CACTGTAGCCATTATCGACG+AGG | - | chr4.3:27864189-27864208 | None:intergenic | 50.0% | |
| CACTTGAAGATGGAGACGCA+AGG | - | chr4.3:27868419-27868438 | None:intergenic | 50.0% | |
| CCACACAAAAGATGAGTCGG+GGG | + | chr4.3:27869446-27869465 | MS.gene56436:intron | 50.0% | |
| CCCACACAAAAGATGAGTCG+GGG | + | chr4.3:27869445-27869464 | MS.gene56436:intron | 50.0% | |
| CGTATGTAGCCATAGCCCAT+AGG | + | chr4.3:27868570-27868589 | MS.gene56436:intron | 50.0% | |
| CTTGAAGATGGAGACGCAAG+GGG | - | chr4.3:27868417-27868436 | None:intergenic | 50.0% | |
| CTTGATGTAGGTCCTGGACA+GGG | + | chr4.3:27869215-27869234 | MS.gene56436:intron | 50.0% | |
| CTTGGTTCAACCAGCTGAAC+CGG | + | chr4.3:27867275-27867294 | MS.gene56436:intron | 50.0% | |
| GACTGAGAACCTTCATCACC+AGG | + | chr4.3:27869266-27869285 | MS.gene56436:CDS | 50.0% | |
| GCACAAGACTTCAGGAACTC+AGG | + | chr4.3:27869542-27869561 | MS.gene56436:CDS | 50.0% | |
| GGGCCTCAGAGTCTAAGAAA+TGG | + | chr4.3:27867655-27867674 | MS.gene56436:intron | 50.0% | |
| GTTGTTGCGGATGAAACGGT+TGG | + | chr4.3:27864492-27864511 | MS.gene56436:CDS | 50.0% | |
| TACTGGCCAGACTAACTTCG+CGG | - | chr4.3:27865063-27865082 | None:intergenic | 50.0% | |
| TTGATGTAGGTCCTGGACAG+GGG | + | chr4.3:27869216-27869235 | MS.gene56436:intron | 50.0% | |
| TTGGAGAGACAAAAGGGGGA+GGG | + | chr4.3:27865200-27865219 | MS.gene56436:intron | 50.0% | |
| TTGTGTGGGATGGAGAGGAA+GGG | - | chr4.3:27869434-27869453 | None:intergenic | 50.0% | |
| TTTGGAGAGACAAAAGGGGG+AGG | + | chr4.3:27865199-27865218 | MS.gene56436:intron | 50.0% | |
| TTTGTGTGGGATGGAGAGGA+AGG | - | chr4.3:27869435-27869454 | None:intergenic | 50.0% | |
| ! | AGAGAGTGCAGAATGAGTGG+GGG | - | chr4.3:27867488-27867507 | None:intergenic | 50.0% |
| ! | CCCCGACTCATCTTTTGTGT+GGG | - | chr4.3:27869448-27869467 | None:intergenic | 50.0% |
| ! | GCTCAGGTGTCTGAAGTGAA+AGG | + | chr4.3:27864800-27864819 | MS.gene56436:CDS | 50.0% |
| ! | GTATTGTGTTGATCACCCGG+AGG | + | chr4.3:27864751-27864770 | MS.gene56436:CDS | 50.0% |
| ! | TATTGCACCCCTATGGGCTA+TGG | - | chr4.3:27868582-27868601 | None:intergenic | 50.0% |
| !! | CAATGTTCGCCGACTTCTCA+TGG | + | chr4.3:27868728-27868747 | MS.gene56436:intron | 50.0% |
| !! | GGAGGTGAGTAAGCTTGCTA+AGG | + | chr4.3:27864772-27864791 | MS.gene56436:CDS | 50.0% |
| !! | GTAGTGGATGATGTTACGCC+AGG | + | chr4.3:27868286-27868305 | MS.gene56436:intron | 50.0% |
| !! | TGCGAAATATGGTGGTGGGA+AGG | + | chr4.3:27864563-27864582 | MS.gene56436:CDS | 50.0% |
| !!! | GGCTTTTCTGGAACGTGTGA+AGG | + | chr4.3:27864530-27864549 | MS.gene56436:CDS | 50.0% |
| CAAGCTTACTCACCTCCTCC+GGG | - | chr4.3:27864769-27864788 | None:intergenic | 55.0% | |
| CCAAGAACCGTAACTGTGCC+TGG | - | chr4.3:27867260-27867279 | None:intergenic | 55.0% | |
| CCAGGCACAGTTACGGTTCT+TGG | + | chr4.3:27867257-27867276 | MS.gene56436:intron | 55.0% | |
| GATGGCTCTCCCGAGTGTTA+TGG | + | chr4.3:27869397-27869416 | MS.gene56436:intron | 55.0% | |
| GCAAGCTTACTCACCTCCTC+CGG | - | chr4.3:27864770-27864789 | None:intergenic | 55.0% | |
| GTGAGACCGCGAAGTTAGTC+TGG | + | chr4.3:27865054-27865073 | MS.gene56436:intron | 55.0% | |
| TGAGGCAGGCACAAGACTTC+AGG | + | chr4.3:27869534-27869553 | MS.gene56436:intron | 55.0% | |
| TGATGTAGGTCCTGGACAGG+GGG | + | chr4.3:27869217-27869236 | MS.gene56436:intron | 55.0% | |
| TGTGTGGGATGGAGAGGAAG+GGG | - | chr4.3:27869433-27869452 | None:intergenic | 55.0% | |
| ! | ACTAGAACAGCCGGTTCAGC+TGG | - | chr4.3:27867288-27867307 | None:intergenic | 55.0% |
| ! | CCCCCGACTCATCTTTTGTG+TGG | - | chr4.3:27869449-27869468 | None:intergenic | 55.0% |
| ! | CTATCTTTTCCCCCCTGTCC+AGG | - | chr4.3:27869230-27869249 | None:intergenic | 55.0% |
| ! | GATGGGGACCTGCCATCTTT+TGG | + | chr4.3:27868444-27868463 | MS.gene56436:intron | 55.0% |
| ! | GCTTGCTAAGGTGAAGGCTC+AGG | + | chr4.3:27864784-27864803 | MS.gene56436:CDS | 55.0% |
| ! | TTGTGTTGATCACCCGGAGG+AGG | + | chr4.3:27864754-27864773 | MS.gene56436:CDS | 55.0% |
| !!! | ACAAGTGCCGGTGGCTTTTC+TGG | + | chr4.3:27864518-27864537 | MS.gene56436:CDS | 55.0% |
| GATGTAGGTCCTGGACAGGG+GGG | + | chr4.3:27869218-27869237 | MS.gene56436:intron | 60.0% | |
| GTGTGGGATGGAGAGGAAGG+GGG | - | chr4.3:27869432-27869451 | None:intergenic | 60.0% | |
| !! | GGTTGGAAGACAAGTGCCGG+TGG | + | chr4.3:27864509-27864528 | MS.gene56436:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27864010 | 27869672 | 27864010 | ID=MS.gene56436 |
| chr4.3 | mRNA | 27864010 | 27869672 | 27864010 | ID=MS.gene56436.t1;Parent=MS.gene56436 |
| chr4.3 | exon | 27864010 | 27864205 | 27864010 | ID=MS.gene56436.t1.exon1;Parent=MS.gene56436.t1 |
| chr4.3 | CDS | 27864010 | 27864205 | 27864010 | ID=cds.MS.gene56436.t1;Parent=MS.gene56436.t1 |
| chr4.3 | exon | 27864484 | 27864625 | 27864484 | ID=MS.gene56436.t1.exon2;Parent=MS.gene56436.t1 |
| chr4.3 | CDS | 27864484 | 27864625 | 27864484 | ID=cds.MS.gene56436.t1;Parent=MS.gene56436.t1 |
| chr4.3 | exon | 27864727 | 27864847 | 27864727 | ID=MS.gene56436.t1.exon3;Parent=MS.gene56436.t1 |
| chr4.3 | CDS | 27864727 | 27864847 | 27864727 | ID=cds.MS.gene56436.t1;Parent=MS.gene56436.t1 |
| chr4.3 | exon | 27869225 | 27869287 | 27869225 | ID=MS.gene56436.t1.exon4;Parent=MS.gene56436.t1 |
| chr4.3 | CDS | 27869225 | 27869287 | 27869225 | ID=cds.MS.gene56436.t1;Parent=MS.gene56436.t1 |
| chr4.3 | exon | 27869538 | 27869672 | 27869538 | ID=MS.gene56436.t1.exon5;Parent=MS.gene56436.t1 |
| chr4.3 | CDS | 27869538 | 27869672 | 27869538 | ID=cds.MS.gene56436.t1;Parent=MS.gene56436.t1 |
| Gene Sequence |
| Protein sequence |
