Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59292.t1 | XP_013452417.1 | 96.9 | 292 | 1 | 1 | 1 | 284 | 1 | 292 | 3.00E-155 | 557.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59292.t1 | Q9FHM7 | 78.8 | 292 | 53 | 2 | 1 | 283 | 1 | 292 | 1.2e-128 | 460.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59292.t1 | I3SG23 | 96.9 | 292 | 1 | 1 | 1 | 284 | 1 | 292 | 2.2e-155 | 557.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene59292 | 0.832446 | 9.41E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene59292 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene050105 | MS.gene59292 | 0.809406 | 1.92E-50 | -1.69E-46 |
| MS.gene050312 | MS.gene59292 | 0.822967 | 1.78E-53 | -1.69E-46 |
| MS.gene051452 | MS.gene59292 | 0.822253 | 2.62E-53 | -1.69E-46 |
| MS.gene051597 | MS.gene59292 | 0.829126 | 6.13E-55 | -1.69E-46 |
| MS.gene051655 | MS.gene59292 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene052500 | MS.gene59292 | 0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene59292 | 0.829772 | 4.27E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene59292 | 0.853999 | 1.65E-61 | -1.69E-46 |
| MS.gene054479 | MS.gene59292 | 0.811651 | 6.29E-51 | -1.69E-46 |
| MS.gene057155 | MS.gene59292 | 0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene59292 | 0.825043 | 5.81E-54 | -1.69E-46 |
| MS.gene057999 | MS.gene59292 | 0.805621 | 1.22E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene59292 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene59292 | 0.822063 | 2.89E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene59292 | 0.807051 | 6.10E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene59292 | 0.81259 | 3.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20481 | MS.gene59292 | PPI |
| MS.gene59292 | MS.gene51046 | PPI |
| MS.gene59292 | MS.gene066086 | PPI |
| MS.gene066091 | MS.gene59292 | PPI |
| MS.gene066088 | MS.gene59292 | PPI |
| MS.gene59292 | MS.gene51051 | PPI |
| MS.gene51045 | MS.gene59292 | PPI |
| MS.gene033164 | MS.gene59292 | PPI |
| MS.gene058043 | MS.gene59292 | PPI |
| MS.gene066085 | MS.gene59292 | PPI |
| MS.gene033161 | MS.gene59292 | PPI |
| MS.gene59292 | MS.gene43265 | PPI |
| MS.gene066097 | MS.gene59292 | PPI |
| MS.gene43264 | MS.gene59292 | PPI |
| MS.gene033158 | MS.gene59292 | PPI |
| MS.gene59292 | MS.gene030984 | PPI |
| MS.gene59292 | MS.gene066087 | PPI |
| MS.gene68929 | MS.gene59292 | PPI |
| MS.gene43234 | MS.gene59292 | PPI |
| MS.gene066093 | MS.gene59292 | PPI |
| MS.gene51054 | MS.gene59292 | PPI |
| MS.gene033163 | MS.gene59292 | PPI |
| MS.gene51047 | MS.gene59292 | PPI |
| MS.gene59292 | MS.gene033162 | PPI |
| MS.gene51044 | MS.gene59292 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59292.t1 | MTR_6g460470 | 96.918 | 292 | 1 | 1 | 1 | 284 | 1 | 292 | 0.0 | 578 |
| MS.gene59292.t1 | MTR_6g011380 | 54.255 | 282 | 121 | 1 | 7 | 280 | 5 | 286 | 3.19e-106 | 310 |
| MS.gene59292.t1 | MTR_8g469160 | 53.004 | 283 | 125 | 1 | 5 | 279 | 3 | 285 | 4.29e-106 | 310 |
| MS.gene59292.t1 | MTR_4g107810 | 54.007 | 287 | 122 | 2 | 1 | 279 | 1 | 285 | 1.63e-104 | 306 |
| MS.gene59292.t1 | MTR_4g107760 | 54.007 | 287 | 122 | 2 | 1 | 279 | 1 | 285 | 1.63e-104 | 306 |
| MS.gene59292.t1 | MTR_4g107810 | 54.007 | 287 | 122 | 2 | 1 | 279 | 61 | 345 | 3.57e-103 | 305 |
| MS.gene59292.t1 | MTR_4g107720 | 54.225 | 284 | 120 | 2 | 1 | 276 | 1 | 282 | 1.56e-102 | 301 |
| MS.gene59292.t1 | MTR_4g107830 | 50.836 | 299 | 122 | 2 | 1 | 276 | 1 | 297 | 2.99e-102 | 300 |
| MS.gene59292.t1 | MTR_4g107730 | 52.817 | 284 | 122 | 3 | 1 | 276 | 1 | 280 | 2.52e-94 | 280 |
| MS.gene59292.t1 | MTR_4g107700 | 56.790 | 81 | 35 | 0 | 196 | 276 | 6 | 86 | 6.19e-31 | 111 |
| MS.gene59292.t1 | MTR_6g060500 | 75.385 | 65 | 3 | 1 | 155 | 206 | 1 | 65 | 2.18e-21 | 88.2 |
| MS.gene59292.t1 | MTR_6g060500 | 88.571 | 35 | 4 | 0 | 128 | 162 | 94 | 128 | 4.35e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59292.t1 | AT5G51570 | 78.767 | 292 | 53 | 2 | 1 | 283 | 1 | 292 | 2.22e-173 | 481 |
| MS.gene59292.t1 | AT3G01290 | 55.594 | 286 | 117 | 2 | 1 | 278 | 1 | 284 | 9.55e-115 | 332 |
| MS.gene59292.t1 | AT5G62740 | 53.472 | 288 | 124 | 2 | 1 | 280 | 1 | 286 | 4.15e-108 | 315 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
| MS.gene59292.t1 | AT1G69840 | 54.286 | 280 | 120 | 1 | 7 | 278 | 5 | 284 | 1.92e-100 | 295 |
Find 53 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGTGCTTATTGTTAAAA+AGG | 0.209960 | 6.4:-44198500 | MS.gene59292:CDS |
| TTTGCTGGTGAATGTCTTGC+TGG | 0.306419 | 6.4:-44203011 | MS.gene59292:CDS |
| AACATCAAGAGAAGCAATTC+TGG | 0.314593 | 6.4:+44202977 | None:intergenic |
| TATTGTTCCGAAGATGAATT+TGG | 0.321026 | 6.4:-44200669 | MS.gene59292:CDS |
| CCTGGCCATGTTAGGGATAT+TGG | 0.321495 | 6.4:-44198253 | MS.gene59292:CDS |
| TAACAGGTGATGGGAGAATA+TGG | 0.326009 | 6.4:-44199717 | MS.gene59292:intron |
| CTCATGGACCTGGCCATGTT+AGG | 0.353338 | 6.4:-44198261 | MS.gene59292:CDS |
| GATGAGCTGTTTGAGCAAAA+AGG | 0.421318 | 6.4:-44200647 | MS.gene59292:CDS |
| AAGTTCTTCCATGACACCTT+TGG | 0.440981 | 6.4:+44200616 | None:intergenic |
| GCAAGACATTCACCAGCAAA+AGG | 0.445848 | 6.4:+44203014 | None:intergenic |
| AGCTCATCCAAATTCATCTT+CGG | 0.457015 | 6.4:+44200662 | None:intergenic |
| TCATGGACCTGGCCATGTTA+GGG | 0.460907 | 6.4:-44198260 | MS.gene59292:CDS |
| CAATTCTCTAACAAGGTAGA+AGG | 0.463722 | 6.4:-44198385 | MS.gene59292:CDS |
| TATTCTTTGAATTGTTTCCA+AGG | 0.488072 | 6.4:+44198299 | None:intergenic |
| AAAGGTGTCATGGAAGAACT+TGG | 0.494843 | 6.4:-44200614 | MS.gene59292:CDS |
| TCAAATTCGCAACGGTATGA+TGG | 0.502780 | 6.4:-44198227 | MS.gene59292:CDS |
| CGTAGGAATTGTTGAACAGT+GGG | 0.512259 | 6.4:-44203081 | MS.gene59292:CDS |
| GGGTTGGTGTGGCAAGGCAG+AGG | 0.513477 | 6.4:-44198444 | MS.gene59292:CDS |
| TTCATTGCTCTCCGCACAGA+AGG | 0.519425 | 6.4:+44199651 | None:intergenic |
| TTTGACACAATCAGAGACCT+TGG | 0.519786 | 6.4:-44198316 | MS.gene59292:CDS |
| CCAATATCCCTAACATGGCC+AGG | 0.522093 | 6.4:+44198253 | None:intergenic |
| AAACCCACAGGAACAGATCC+AGG | 0.524804 | 6.4:-44200919 | MS.gene59292:CDS |
| TAGGCGGGGTTGGTGTGGCA+AGG | 0.525567 | 6.4:-44198450 | MS.gene59292:CDS |
| GCTCTCCGCACAGAAGGATC+AGG | 0.528412 | 6.4:+44199657 | None:intergenic |
| AACACGTTCTGTTTATTCTG+TGG | 0.531087 | 6.4:-44203122 | MS.gene59292:CDS |
| AACTTCAGCGAAGGAAGTGA+TGG | 0.541593 | 6.4:-44198362 | MS.gene59292:CDS |
| TGAGGTTGCCAAAGGTGTCA+TGG | 0.542605 | 6.4:-44200624 | MS.gene59292:CDS |
| TTTCAAAGAGTTGCTCAACC+TGG | 0.547043 | 6.4:-44203053 | MS.gene59292:CDS |
| AAGCCTGGATCTGTTCCTGT+GGG | 0.556410 | 6.4:+44200916 | None:intergenic |
| GCAATGAATGAGATCAATGC+AGG | 0.559095 | 6.4:-44199636 | MS.gene59292:intron |
| TTATGAGTTGCAAAACCCAC+AGG | 0.568041 | 6.4:-44200931 | MS.gene59292:CDS |
| CAAGACATTCACCAGCAAAA+GGG | 0.568721 | 6.4:+44203015 | None:intergenic |
| CTAATTGCTAGTGAATTCAA+AGG | 0.579985 | 6.4:-44198532 | MS.gene59292:CDS |
| CAGAGGCAAGCTATCACAGA+TGG | 0.588640 | 6.4:-44198427 | MS.gene59292:CDS |
| GATTTAATTTCACAGCTCAA+AGG | 0.589650 | 6.4:-44198558 | MS.gene59292:intron |
| AATTCAATACCGTGTAGTGA+AGG | 0.591143 | 6.4:-44200973 | MS.gene59292:CDS |
| TAAGCCTGGATCTGTTCCTG+TGG | 0.599315 | 6.4:+44200915 | None:intergenic |
| ATTCAAAGGAGAAGCAGACA+AGG | 0.606173 | 6.4:-44198518 | MS.gene59292:CDS |
| GGGTTAAAGATTTGAAAACC+AGG | 0.613444 | 6.4:+44203035 | None:intergenic |
| TCATCTTCGGAACAATAGCA+CGG | 0.622958 | 6.4:+44200675 | None:intergenic |
| CATCTTCGGAACAATAGCAC+GGG | 0.623161 | 6.4:+44200676 | None:intergenic |
| GGTAGAAGGAACTTCAGCGA+AGG | 0.623591 | 6.4:-44198371 | MS.gene59292:CDS |
| AACTTCATGTAACAGGTGAT+GGG | 0.624039 | 6.4:-44199726 | MS.gene59292:intron |
| TAGCATAGAGCACATACTGA+TGG | 0.631526 | 6.4:-44199691 | MS.gene59292:CDS |
| TATCTTGCAATTCTCTAACA+AGG | 0.634296 | 6.4:-44198392 | MS.gene59292:CDS |
| TGTGTTGAACAATCAAGCGT+AGG | 0.634971 | 6.4:-44203098 | MS.gene59292:CDS |
| GCGTAGGAATTGTTGAACAG+TGG | 0.637775 | 6.4:-44203082 | MS.gene59292:CDS |
| TGTCATGGAAGAACTTGGAA+AGG | 0.643353 | 6.4:-44200609 | MS.gene59292:intron |
| GATCACCAATATCCCTAACA+TGG | 0.643726 | 6.4:+44198248 | None:intergenic |
| ATTGGTGATCAAATTCGCAA+CGG | 0.665624 | 6.4:-44198235 | MS.gene59292:CDS |
| CTAACATGGCCAGGTCCATG+AGG | 0.693167 | 6.4:+44198262 | None:intergenic |
| TTATACCTGATCCTTCTGTG+CGG | 0.761344 | 6.4:-44199662 | MS.gene59292:CDS |
| GTAGGAATTGTTGAACAGTG+GGG | 0.794915 | 6.4:-44203080 | MS.gene59292:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAACATAAAATAAAATT+AGG | + | chr6.4:44201910-44201929 | None:intergenic | 10.0% |
| !!! | AATTTTATTTTATGTTTTGT+GGG | - | chr6.4:44201910-44201929 | MS.gene59292:intron | 10.0% |
| !!! | TAATTTTATTTTATGTTTTG+TGG | - | chr6.4:44201909-44201928 | MS.gene59292:intron | 10.0% |
| !! | AACATAAAATAAAATTAGGA+TGG | + | chr6.4:44201906-44201925 | None:intergenic | 15.0% |
| !! | AATCACAAAATTTAAGTATT+GGG | - | chr6.4:44201792-44201811 | MS.gene59292:intron | 15.0% |
| !! | ATAAAAATCATTTCTGATAA+TGG | + | chr6.4:44199006-44199025 | None:intergenic | 15.0% |
| !! | ATTTGGCTAATAATTATTTA+TGG | - | chr6.4:44199993-44200012 | MS.gene59292:intron | 15.0% |
| !! | CATCAAAAAATTATAACAAA+TGG | - | chr6.4:44199865-44199884 | MS.gene59292:intron | 15.0% |
| !!! | AAAAATATCATTTTTCCAAT+TGG | + | chr6.4:44199405-44199424 | None:intergenic | 15.0% |
| !!! | AAATCACTTTATTTATATTC+AGG | - | chr6.4:44199703-44199722 | MS.gene59292:CDS | 15.0% |
| !!! | AAATGATTTTGATGATTAAT+TGG | - | chr6.4:44198680-44198699 | MS.gene59292:intron | 15.0% |
| !!! | ATTTTTGTTGTTTATTTACA+TGG | - | chr6.4:44200469-44200488 | MS.gene59292:intron | 15.0% |
| !!! | GAATATAAATAAAGTGATTT+TGG | + | chr6.4:44199703-44199722 | None:intergenic | 15.0% |
| !!! | TATCTGAGATATATTAAATT+TGG | - | chr6.4:44199888-44199907 | MS.gene59292:intron | 15.0% |
| !!! | TATTATTTTGTTTAGATAAG+TGG | + | chr6.4:44199474-44199493 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr6.4:44200105-44200124 | None:intergenic | 15.0% |
| !! | AAAAAAAAGTTGTAACAAAC+AGG | + | chr6.4:44199044-44199063 | None:intergenic | 20.0% |
| !! | AACAAAAAATTGTAACAAAC+AGG | + | chr6.4:44199442-44199461 | None:intergenic | 20.0% |
| !! | CAATCACAAAATTTAAGTAT+TGG | - | chr6.4:44201791-44201810 | MS.gene59292:intron | 20.0% |
| !! | TAAAATTGAAACCAAAACTA+AGG | - | chr6.4:44198365-44198384 | MS.gene59292:CDS | 20.0% |
| !! | TGTATGTTGTAAAAGATAAA+GGG | - | chr6.4:44202483-44202502 | MS.gene59292:intron | 20.0% |
| !! | TTATACATGAATTTCATAAG+TGG | - | chr6.4:44200837-44200856 | MS.gene59292:intron | 20.0% |
| !! | TTTATTATTCAGAAGTTTGT+CGG | - | chr6.4:44199258-44199277 | MS.gene59292:intron | 20.0% |
| !!! | AAATTATGGTTTTCTGTTAT+AGG | - | chr6.4:44201279-44201298 | MS.gene59292:intron | 20.0% |
| !!! | AAGTTTACATTAACTTGTTA+CGG | - | chr6.4:44199502-44199521 | MS.gene59292:intron | 20.0% |
| !!! | CTGAAAATCAAATTTGTTTA+GGG | - | chr6.4:44199187-44199206 | MS.gene59292:intron | 20.0% |
| !!! | GAAATGTATTCTCTAATTTT+AGG | - | chr6.4:44201357-44201376 | MS.gene59292:intron | 20.0% |
| !!! | GGTTAAAGTTTGTATTTTTA+GGG | - | chr6.4:44198615-44198634 | MS.gene59292:intron | 20.0% |
| !!! | GTTAAAGTTTGTATTTTTAG+GGG | - | chr6.4:44198616-44198635 | MS.gene59292:intron | 20.0% |
| !!! | GTTTGTTACAATTTTTTGTT+AGG | - | chr6.4:44199442-44199461 | MS.gene59292:intron | 20.0% |
| !!! | TGGTTAAAGTTTGTATTTTT+AGG | - | chr6.4:44198614-44198633 | MS.gene59292:intron | 20.0% |
| !!! | TTTGATTAAAGTTGGTATTT+CGG | - | chr6.4:44198792-44198811 | MS.gene59292:intron | 20.0% |
| !!! | TTTTTGAGTGATTTTCATTA+TGG | - | chr6.4:44199622-44199641 | MS.gene59292:intron | 20.0% |
| ! | AAAATAAGCCTAATCCAAAT+GGG | + | chr6.4:44199213-44199232 | None:intergenic | 25.0% |
| ! | AAACAACAATGATATCGATA+AGG | + | chr6.4:44200614-44200633 | None:intergenic | 25.0% |
| ! | AAACTGAAGTAGCAAAATAT+CGG | + | chr6.4:44201842-44201861 | None:intergenic | 25.0% |
| ! | AATGCAATAAACAAACATAC+AGG | + | chr6.4:44202362-44202381 | None:intergenic | 25.0% |
| ! | AATTTGACATCTGTGTTTAT+TGG | - | chr6.4:44201104-44201123 | MS.gene59292:intron | 25.0% |
| ! | ATATCATGCAAATAAAGTCA+TGG | + | chr6.4:44201870-44201889 | None:intergenic | 25.0% |
| ! | ATCAAACACAAAACAACTTA+TGG | + | chr6.4:44199160-44199179 | None:intergenic | 25.0% |
| ! | ATGCAATAAACAAACATACA+GGG | + | chr6.4:44202361-44202380 | None:intergenic | 25.0% |
| ! | ATTTATATTCAGGAACAAAC+TGG | - | chr6.4:44199713-44199732 | MS.gene59292:CDS | 25.0% |
| ! | CAACTTTCATATCGAAAAAA+TGG | + | chr6.4:44201960-44201979 | None:intergenic | 25.0% |
| ! | GACATTAAACCAAATAATTC+AGG | + | chr6.4:44199950-44199969 | None:intergenic | 25.0% |
| ! | GACATTATTTAACAACACTA+TGG | + | chr6.4:44202155-44202174 | None:intergenic | 25.0% |
| ! | GGATAGAAGTAAGTAAAATT+TGG | - | chr6.4:44199976-44199995 | MS.gene59292:intron | 25.0% |
| ! | GTCAGTAAAAAGAGATAATT+CGG | - | chr6.4:44201459-44201478 | MS.gene59292:intron | 25.0% |
| ! | GTGTATGTTGTAAAAGATAA+AGG | - | chr6.4:44202482-44202501 | MS.gene59292:intron | 25.0% |
| ! | TATCATGCAAATAAAGTCAT+GGG | + | chr6.4:44201869-44201888 | None:intergenic | 25.0% |
| ! | TATTCTTTGAATTGTTTCCA+AGG | + | chr6.4:44203024-44203043 | None:intergenic | 25.0% |
| ! | TTATATGAACATATCCACTA+TGG | + | chr6.4:44200898-44200917 | None:intergenic | 25.0% |
| !! | AAAGAAGAATACCTTAGTTT+TGG | + | chr6.4:44198379-44198398 | None:intergenic | 25.0% |
| !! | AAGTAACTTGTATGATATCA+AGG | + | chr6.4:44201331-44201350 | None:intergenic | 25.0% |
| !! | AATTTTGTGATTGAGTATAC+TGG | + | chr6.4:44201784-44201803 | None:intergenic | 25.0% |
| !! | AGTAACTTGTATGATATCAA+GGG | + | chr6.4:44201330-44201349 | None:intergenic | 25.0% |
| !! | ATACATTTTACTGCTTGATA+TGG | + | chr6.4:44201757-44201776 | None:intergenic | 25.0% |
| !! | ATTTGGTTTAATGTCTCAAT+TGG | - | chr6.4:44199955-44199974 | MS.gene59292:intron | 25.0% |
| !! | CAACAAATTTAACTTAAACC+CGG | + | chr6.4:44198646-44198665 | None:intergenic | 25.0% |
| !! | GATATCATACAAGTTACTTT+AGG | - | chr6.4:44201332-44201351 | MS.gene59292:intron | 25.0% |
| !! | GCTGAAAATCAAATTTGTTT+AGG | - | chr6.4:44199186-44199205 | MS.gene59292:intron | 25.0% |
| !! | TATTTTGTTAGGGATTATGA+AGG | - | chr6.4:44198866-44198885 | MS.gene59292:intron | 25.0% |
| !! | TCAAACTACTGTACTAATTT+TGG | - | chr6.4:44201081-44201100 | MS.gene59292:intron | 25.0% |
| !! | TGTTGTTGTTCTTGAAATTA+TGG | - | chr6.4:44201265-44201284 | MS.gene59292:intron | 25.0% |
| !!! | AGTGGTTATATTAGTTTTCA+GGG | - | chr6.4:44201990-44202009 | MS.gene59292:intron | 25.0% |
| !!! | TAGTGGTTATATTAGTTTTC+AGG | - | chr6.4:44201989-44202008 | MS.gene59292:intron | 25.0% |
| !!! | TATCATTTTTCCAATTGGAT+CGG | + | chr6.4:44199400-44199419 | None:intergenic | 25.0% |
| AATGACATAGTTCAATGTGT+TGG | - | chr6.4:44200120-44200139 | MS.gene59292:intron | 30.0% | |
| ACATGAATTTCATAAGTGGT+GGG | - | chr6.4:44200841-44200860 | MS.gene59292:intron | 30.0% | |
| ACTTTCTTTCTACTTTCAAG+AGG | + | chr6.4:44200923-44200942 | None:intergenic | 30.0% | |
| AGAGAGAACTGAGTAATATA+AGG | - | chr6.4:44201415-44201434 | MS.gene59292:intron | 30.0% | |
| ATGCAGGTAATAATACTTTG+TGG | - | chr6.4:44201700-44201719 | MS.gene59292:intron | 30.0% | |
| ATTTAACAACACTATGGAGA+TGG | + | chr6.4:44202149-44202168 | None:intergenic | 30.0% | |
| CAAAATAAGCCTAATCCAAA+TGG | + | chr6.4:44199214-44199233 | None:intergenic | 30.0% | |
| CTAATTGCTAGTGAATTCAA+AGG | - | chr6.4:44202788-44202807 | MS.gene59292:intron | 30.0% | |
| GAAAGTTGTTAGTGAATTAG+TGG | - | chr6.4:44201972-44201991 | MS.gene59292:intron | 30.0% | |
| TAAAATACACCTATGAAGCA+AGG | + | chr6.4:44202706-44202725 | None:intergenic | 30.0% | |
| TAATGTCAAACACTGTCATT+TGG | - | chr6.4:44202435-44202454 | MS.gene59292:intron | 30.0% | |
| TACATGAATTTCATAAGTGG+TGG | - | chr6.4:44200840-44200859 | MS.gene59292:intron | 30.0% | |
| TAGAAATGATCCTAGTAATC+TGG | - | chr6.4:44198430-44198449 | MS.gene59292:CDS | 30.0% | |
| TATCAAGACAAATTCTACGA+TGG | + | chr6.4:44201183-44201202 | None:intergenic | 30.0% | |
| TATCTTGCAATTCTCTAACA+AGG | - | chr6.4:44202928-44202947 | MS.gene59292:intron | 30.0% | |
| TATTGGCATAAACGTGAAAA+AGG | + | chr6.4:44201549-44201568 | None:intergenic | 30.0% | |
| TATTGTTCCGAAGATGAATT+TGG | - | chr6.4:44200651-44200670 | MS.gene59292:CDS | 30.0% | |
| TCATAGAAATATGTAAGCAC+TGG | - | chr6.4:44200790-44200809 | MS.gene59292:intron | 30.0% | |
| TGCAATAAACAAACATACAG+GGG | + | chr6.4:44202360-44202379 | None:intergenic | 30.0% | |
| TTTAACAACACTATGGAGAT+GGG | + | chr6.4:44202148-44202167 | None:intergenic | 30.0% | |
| ! | CAAGGTGCTTATTGTTAAAA+AGG | - | chr6.4:44202820-44202839 | MS.gene59292:intron | 30.0% |
| ! | CTCTGTTTCTTATCTTCTTA+TGG | - | chr6.4:44201731-44201750 | MS.gene59292:intron | 30.0% |
| ! | GATTTAATTTCACAGCTCAA+AGG | - | chr6.4:44202762-44202781 | MS.gene59292:intron | 30.0% |
| !! | CGAGTATAAGTTGAATTTTG+AGG | - | chr6.4:44201015-44201034 | MS.gene59292:intron | 30.0% |
| !! | GTTTTCAGGGTTTGAATTTT+AGG | - | chr6.4:44202003-44202022 | MS.gene59292:intron | 30.0% |
| !!! | GAGTAGTTGTTATTTTTGTG+TGG | - | chr6.4:44201223-44201242 | MS.gene59292:intron | 30.0% |
| !!! | TAGTTGTTATTTTTGTGTGG+TGG | - | chr6.4:44201226-44201245 | MS.gene59292:intron | 30.0% |
| AACACATATTGTGTCACACA+CGG | - | chr6.4:44202521-44202540 | MS.gene59292:intron | 35.0% | |
| AACACGTTCTGTTTATTCTG+TGG | - | chr6.4:44198198-44198217 | MS.gene59292:CDS | 35.0% | |
| AACATCAAGAGAAGCAATTC+TGG | + | chr6.4:44198346-44198365 | None:intergenic | 35.0% | |
| AACCATCAAAAACATAAGCC+TGG | + | chr6.4:44200422-44200441 | None:intergenic | 35.0% | |
| AACCCGTTTGGTAAACTAAA+GGG | + | chr6.4:44202055-44202074 | None:intergenic | 35.0% | |
| AACTTCATGTAACAGGTGAT+GGG | - | chr6.4:44201594-44201613 | MS.gene59292:intron | 35.0% | |
| AAGTGAGCTTAAGACAAACA+AGG | + | chr6.4:44202094-44202113 | None:intergenic | 35.0% | |
| AAGTTCCAATCTATGAAGCA+TGG | + | chr6.4:44200193-44200212 | None:intergenic | 35.0% | |
| AATTCAATACCGTGTAGTGA+AGG | - | chr6.4:44200347-44200366 | MS.gene59292:intron | 35.0% | |
| ACAATAACACTGTTGCATAG+TGG | - | chr6.4:44202264-44202283 | MS.gene59292:intron | 35.0% | |
| AGCTCATCCAAATTCATCTT+CGG | + | chr6.4:44200661-44200680 | None:intergenic | 35.0% | |
| ATCACCTGTTACATGAAGTT+CGG | + | chr6.4:44201594-44201613 | None:intergenic | 35.0% | |
| ATGCAAATAAAGTCATGGGA+AGG | + | chr6.4:44201865-44201884 | None:intergenic | 35.0% | |
| CAAATATAAGCCGATCCAAT+TGG | - | chr6.4:44199387-44199406 | MS.gene59292:intron | 35.0% | |
| CAATTCTCTAACAAGGTAGA+AGG | - | chr6.4:44202935-44202954 | MS.gene59292:intron | 35.0% | |
| CAGACGAATTTGAGCTTAAT+TGG | - | chr6.4:44200024-44200043 | MS.gene59292:intron | 35.0% | |
| CGATCGGATTTGATTAAAGT+TGG | - | chr6.4:44198784-44198803 | MS.gene59292:intron | 35.0% | |
| CTGCTTAAGCCTGAATTATT+TGG | - | chr6.4:44199938-44199957 | MS.gene59292:intron | 35.0% | |
| GGGTTAAAGATTTGAAAACC+AGG | + | chr6.4:44198288-44198307 | None:intergenic | 35.0% | |
| GGTTGAGACAATGACTTTAT+CGG | - | chr6.4:44200964-44200983 | MS.gene59292:CDS | 35.0% | |
| GTAAACTAAAGGGACATTGA+AGG | + | chr6.4:44202045-44202064 | None:intergenic | 35.0% | |
| GTAAATGAGGAGATAGGTAT+TGG | + | chr6.4:44201566-44201585 | None:intergenic | 35.0% | |
| TAATTGGAACCTATGAAGCA+TGG | - | chr6.4:44200040-44200059 | MS.gene59292:intron | 35.0% | |
| TCCATGAGGTATAAAAACTG+TGG | + | chr6.4:44203047-44203066 | None:intergenic | 35.0% | |
| TCTCTCCTCTAAATACTCAA+AGG | + | chr6.4:44201400-44201419 | None:intergenic | 35.0% | |
| TGATATGAGAAAGTGACACA+GGG | + | chr6.4:44200583-44200602 | None:intergenic | 35.0% | |
| TGCATGATATCTGATGAAGT+GGG | - | chr6.4:44201880-44201899 | MS.gene59292:intron | 35.0% | |
| TTGCATGATATCTGATGAAG+TGG | - | chr6.4:44201879-44201898 | MS.gene59292:intron | 35.0% | |
| TTTGTGTCTGTAAATGATCC+TGG | - | chr6.4:44198569-44198588 | MS.gene59292:intron | 35.0% | |
| ! | AAATTTGTTTAGGGCCCATT+TGG | - | chr6.4:44199196-44199215 | MS.gene59292:intron | 35.0% |
| ! | ACCACAGTTTTTATACCTCA+TGG | - | chr6.4:44203043-44203062 | MS.gene59292:CDS | 35.0% |
| ! | ATTGGTGATCAAATTCGCAA+CGG | - | chr6.4:44203085-44203104 | MS.gene59292:CDS | 35.0% |
| ! | CAAATCTTTAACCCTTTTGC+TGG | - | chr6.4:44198294-44198313 | MS.gene59292:CDS | 35.0% |
| ! | GAAGCCGAATCAAAGTTTTT+AGG | - | chr6.4:44202851-44202870 | MS.gene59292:intron | 35.0% |
| ! | TGTCCCTTTAGTTTACCAAA+CGG | - | chr6.4:44202049-44202068 | MS.gene59292:intron | 35.0% |
| !! | AAAGTTGGTATTTCGGAGTT+TGG | - | chr6.4:44198799-44198818 | MS.gene59292:intron | 35.0% |
| !! | ACATTGAAGGAGTTTTAACC+AGG | + | chr6.4:44202032-44202051 | None:intergenic | 35.0% |
| !! | ATCATTGTTGTTTGTTGCAG+TGG | - | chr6.4:44200621-44200640 | MS.gene59292:CDS | 35.0% |
| !! | ATCCAGGCTTATGTTTTTGA+TGG | - | chr6.4:44200417-44200436 | MS.gene59292:intron | 35.0% |
| !!! | CTCTAATTTTAGGACGAGAA+AGG | - | chr6.4:44201367-44201386 | MS.gene59292:intron | 35.0% |
| !!! | TTGTATTTTTAGGGGTTGAC+CGG | - | chr6.4:44198624-44198643 | MS.gene59292:intron | 35.0% |
| !!! | TTTTCAAGTATAGTCCACTG+TGG | - | chr6.4:44201139-44201158 | MS.gene59292:intron | 35.0% |
| AAGTTCTTCCATGACACCTT+TGG | + | chr6.4:44200707-44200726 | None:intergenic | 40.0% | |
| ACATACAGGGGTTGCATATA+TGG | + | chr6.4:44202348-44202367 | None:intergenic | 40.0% | |
| AGTGTCCATGCTTCATAGAT+TGG | - | chr6.4:44200185-44200204 | MS.gene59292:intron | 40.0% | |
| ATGGGATAAACACATGTGCA+GGG | + | chr6.4:44202130-44202149 | None:intergenic | 40.0% | |
| ATTCAAAGGAGAAGCAGACA+AGG | - | chr6.4:44202802-44202821 | MS.gene59292:intron | 40.0% | |
| CAACCCGTTTGGTAAACTAA+AGG | + | chr6.4:44202056-44202075 | None:intergenic | 40.0% | |
| CAAGACATTCACCAGCAAAA+GGG | + | chr6.4:44198308-44198327 | None:intergenic | 40.0% | |
| CAGTTTAAATACATGTGCCG+TGG | + | chr6.4:44202623-44202642 | None:intergenic | 40.0% | |
| CCCGCCTAAAAACTTTGATT+CGG | + | chr6.4:44202858-44202877 | None:intergenic | 40.0% | |
| CGTAGGAATTGTTGAACAGT+GGG | - | chr6.4:44198239-44198258 | MS.gene59292:CDS | 40.0% | |
| CTGATATGAGAAAGTGACAC+AGG | + | chr6.4:44200584-44200603 | None:intergenic | 40.0% | |
| CTGGTAATCTTGAGTTCGAT+CGG | - | chr6.4:44198768-44198787 | MS.gene59292:intron | 40.0% | |
| CTGTGGAAAACCTATCAAAG+TGG | - | chr6.4:44201156-44201175 | MS.gene59292:intron | 40.0% | |
| GAACTTCATGTAACAGGTGA+TGG | - | chr6.4:44201593-44201612 | MS.gene59292:intron | 40.0% | |
| GATCACCAATATCCCTAACA+TGG | + | chr6.4:44203075-44203094 | None:intergenic | 40.0% | |
| GATGAGCTGTTTGAGCAAAA+AGG | - | chr6.4:44200673-44200692 | MS.gene59292:CDS | 40.0% | |
| GCAATGAATGAGATCAATGC+AGG | - | chr6.4:44201684-44201703 | MS.gene59292:intron | 40.0% | |
| GTAGGAATTGTTGAACAGTG+GGG | - | chr6.4:44198240-44198259 | MS.gene59292:CDS | 40.0% | |
| TAGCATAGAGCACATACTGA+TGG | - | chr6.4:44201629-44201648 | MS.gene59292:intron | 40.0% | |
| TCAAATTCGCAACGGTATGA+TGG | - | chr6.4:44203093-44203112 | MS.gene59292:CDS | 40.0% | |
| TCACCTGTTACATGAAGTTC+GGG | + | chr6.4:44201593-44201612 | None:intergenic | 40.0% | |
| TCATCTTCGGAACAATAGCA+CGG | + | chr6.4:44200648-44200667 | None:intergenic | 40.0% | |
| TCTTAGTCAAGCTGCATGAT+GGG | + | chr6.4:44202391-44202410 | None:intergenic | 40.0% | |
| TGGTATTTCGGAGTTTGGTT+GGG | - | chr6.4:44198804-44198823 | MS.gene59292:intron | 40.0% | |
| TGTCAGACAATGACACATGT+CGG | + | chr6.4:44202600-44202619 | None:intergenic | 40.0% | |
| TGTCAGTATCCTTGCTTCAT+AGG | - | chr6.4:44202694-44202713 | MS.gene59292:intron | 40.0% | |
| TGTCATGGAAGAACTTGGAA+AGG | - | chr6.4:44200711-44200730 | MS.gene59292:intron | 40.0% | |
| TGTGTTGAACAATCAAGCGT+AGG | - | chr6.4:44198222-44198241 | MS.gene59292:CDS | 40.0% | |
| TTAATAGGGGTAGTCCATAG+TGG | - | chr6.4:44200881-44200900 | MS.gene59292:intron | 40.0% | |
| TTATACCTGATCCTTCTGTG+CGG | - | chr6.4:44201658-44201677 | MS.gene59292:intron | 40.0% | |
| TTATGAGTTGCAAAACCCAC+AGG | - | chr6.4:44200389-44200408 | MS.gene59292:intron | 40.0% | |
| TTCTTAGTCAAGCTGCATGA+TGG | + | chr6.4:44202392-44202411 | None:intergenic | 40.0% | |
| TTGGTATTTCGGAGTTTGGT+TGG | - | chr6.4:44198803-44198822 | MS.gene59292:intron | 40.0% | |
| TTTCAAAGAGTTGCTCAACC+TGG | - | chr6.4:44198267-44198286 | MS.gene59292:CDS | 40.0% | |
| TTTGACACAATCAGAGACCT+TGG | - | chr6.4:44203004-44203023 | MS.gene59292:CDS | 40.0% | |
| TTTGTGTCTGTAAACGATCC+TGG | - | chr6.4:44198749-44198768 | MS.gene59292:intron | 40.0% | |
| ! | ACTATGGACTACCCCTATTA+AGG | + | chr6.4:44200882-44200901 | None:intergenic | 40.0% |
| ! | AGTGGTTTTTGCATTGTGTG+TGG | - | chr6.4:44200289-44200308 | MS.gene59292:intron | 40.0% |
| ! | CATGTCGTAATGATAGTGAG+TGG | - | chr6.4:44200271-44200290 | MS.gene59292:intron | 40.0% |
| ! | CTTTGATAGGTTTTCCACAG+TGG | + | chr6.4:44201156-44201175 | None:intergenic | 40.0% |
| ! | GATCCTAGTAATCTGGAGTT+CGG | - | chr6.4:44198437-44198456 | MS.gene59292:CDS | 40.0% |
| ! | GTCCCTTTAGTTTACCAAAC+GGG | - | chr6.4:44202050-44202069 | MS.gene59292:intron | 40.0% |
| ! | GTGGTTTTTGCATTGTGTGT+GGG | - | chr6.4:44200290-44200309 | MS.gene59292:intron | 40.0% |
| ! | GTGTTGTTAATCGCAGATCA+CGG | + | chr6.4:44202312-44202331 | None:intergenic | 40.0% |
| ! | GTTTTTATACCTCATGGACC+TGG | - | chr6.4:44203049-44203068 | MS.gene59292:CDS | 40.0% |
| !! | AAAGGTGTCATGGAAGAACT+TGG | - | chr6.4:44200706-44200725 | MS.gene59292:intron | 40.0% |
| !! | CACAGTCTTGTTCATGCTTA+CGG | - | chr6.4:44200943-44200962 | MS.gene59292:CDS | 40.0% |
| !! | CCGAATCAAAGTTTTTAGGC+GGG | - | chr6.4:44202855-44202874 | MS.gene59292:intron | 40.0% |
| !! | CGAATCAAAGTTTTTAGGCG+GGG | - | chr6.4:44202856-44202875 | MS.gene59292:intron | 40.0% |
| !! | GCCGAATCAAAGTTTTTAGG+CGG | - | chr6.4:44202854-44202873 | MS.gene59292:intron | 40.0% |
| !! | TAACAGGTGATGGGAGAATA+TGG | - | chr6.4:44201603-44201622 | MS.gene59292:intron | 40.0% |
| !! | TTGAAGGAGTTTTAACCAGG+AGG | + | chr6.4:44202029-44202048 | None:intergenic | 40.0% |
| !!! | ATTTTAGGACGAGAAAGGCA+CGG | - | chr6.4:44201372-44201391 | MS.gene59292:intron | 40.0% |
| !!! | TGTATTTTTAGGGGTTGACC+GGG | - | chr6.4:44198625-44198644 | MS.gene59292:intron | 40.0% |
| AACTTCAGCGAAGGAAGTGA+TGG | - | chr6.4:44202958-44202977 | MS.gene59292:intron | 45.0% | |
| AAGTTCGGGAGGAGTAAATG+AGG | + | chr6.4:44201579-44201598 | None:intergenic | 45.0% | |
| ACCCCTATTAAGGTAGTCCA+CGG | + | chr6.4:44200872-44200891 | None:intergenic | 45.0% | |
| AGACCGAACTCCAGATTACT+AGG | + | chr6.4:44198443-44198462 | None:intergenic | 45.0% | |
| ATCTCGAGTTCGGTCTGATT+TGG | - | chr6.4:44198594-44198613 | MS.gene59292:intron | 45.0% | |
| ATGAAGCATGGACACTGACA+CGG | - | chr6.4:44200052-44200071 | MS.gene59292:intron | 45.0% | |
| CAAAAAGGTGAGGTTGCCAA+AGG | - | chr6.4:44200688-44200707 | MS.gene59292:intron | 45.0% | |
| CATCTTCGGAACAATAGCAC+GGG | + | chr6.4:44200647-44200666 | None:intergenic | 45.0% | |
| CGATCGAACTCAAGATTACC+AGG | + | chr6.4:44198770-44198789 | None:intergenic | 45.0% | |
| CGGTGCCTTTGAGTATTTAG+AGG | - | chr6.4:44201392-44201411 | MS.gene59292:intron | 45.0% | |
| CTACGATGGACCACTTTGAT+AGG | + | chr6.4:44201169-44201188 | None:intergenic | 45.0% | |
| GATCCTGGTAATCTCGAGTT+CGG | - | chr6.4:44198584-44198603 | MS.gene59292:intron | 45.0% | |
| GATGGGATAAACACATGTGC+AGG | + | chr6.4:44202131-44202150 | None:intergenic | 45.0% | |
| GCAAGACATTCACCAGCAAA+AGG | + | chr6.4:44198309-44198328 | None:intergenic | 45.0% | |
| GCGTAGGAATTGTTGAACAG+TGG | - | chr6.4:44198238-44198257 | MS.gene59292:CDS | 45.0% | |
| GCTGTTTGAGCAAAAAGGTG+AGG | - | chr6.4:44200678-44200697 | MS.gene59292:CDS | 45.0% | |
| GGAGGAGTAAATGAGGAGAT+AGG | + | chr6.4:44201572-44201591 | None:intergenic | 45.0% | |
| TATGAAGCATGGACACTCCT+CGG | + | chr6.4:44200182-44200201 | None:intergenic | 45.0% | |
| TCGCAGATCACGGAAAATAG+CGG | + | chr6.4:44202302-44202321 | None:intergenic | 45.0% | |
| TGAAGCAAGGATACTGACAC+CGG | + | chr6.4:44202693-44202712 | None:intergenic | 45.0% | |
| TGGGATAAACACATGTGCAG+GGG | + | chr6.4:44202129-44202148 | None:intergenic | 45.0% | |
| TGTCAGTGTCCATGCTTCAT+AGG | + | chr6.4:44200052-44200071 | None:intergenic | 45.0% | |
| TTTGCTGGTGAATGTCTTGC+TGG | - | chr6.4:44198309-44198328 | MS.gene59292:CDS | 45.0% | |
| ! | ATGTTTTGTGGGACTCTGAG+AGG | - | chr6.4:44201921-44201940 | MS.gene59292:intron | 45.0% |
| ! | CAGCGTTTTCCTTCACTACA+CGG | + | chr6.4:44200359-44200378 | None:intergenic | 45.0% |
| ! | GGTTTGAATTTTAGGCCTCC+TGG | - | chr6.4:44202011-44202030 | MS.gene59292:intron | 45.0% |
| ! | GTTTAGGGCCCATTTGGATT+AGG | - | chr6.4:44199202-44199221 | MS.gene59292:intron | 45.0% |
| ! | TGCCGTGGACTACCTTAATA+GGG | - | chr6.4:44200867-44200886 | MS.gene59292:intron | 45.0% |
| ! | TGTGTCATTGTCTGACACCA+CGG | - | chr6.4:44202603-44202622 | MS.gene59292:intron | 45.0% |
| !! | ACCAAACGGGTTGTCTACTT+GGG | - | chr6.4:44202063-44202082 | MS.gene59292:intron | 45.0% |
| !! | TACCAAACGGGTTGTCTACT+TGG | - | chr6.4:44202062-44202081 | MS.gene59292:intron | 45.0% |
| !! | TCAAAGTTTTTAGGCGGGGT+TGG | - | chr6.4:44202860-44202879 | MS.gene59292:intron | 45.0% |
| !! | ATTATAGTAAAAAAAATATA+TGG | - | chr6.4:44200761-44200780 | MS.gene59292:intron | 5.0% |
| !!! | ATTTTATAAATTATTTTGTT+AGG | - | chr6.4:44198855-44198874 | MS.gene59292:intron | 5.0% |
| !!! | TTTTATAAATTATTTTGTTA+GGG | - | chr6.4:44198856-44198875 | MS.gene59292:intron | 5.0% |
| AAACCCACAGGAACAGATCC+AGG | - | chr6.4:44200401-44200420 | MS.gene59292:intron | 50.0% | |
| AAGCCTGGATCTGTTCCTGT+GGG | + | chr6.4:44200407-44200426 | None:intergenic | 50.0% | |
| AGACCGAACTCGAGATTACC+AGG | + | chr6.4:44198590-44198609 | None:intergenic | 50.0% | |
| CAATGACACATGTCGGACAC+CGG | + | chr6.4:44202593-44202612 | None:intergenic | 50.0% | |
| CAGAGGCAAGCTATCACAGA+TGG | - | chr6.4:44202893-44202912 | MS.gene59292:intron | 50.0% | |
| CCAATATCCCTAACATGGCC+AGG | + | chr6.4:44203070-44203089 | None:intergenic | 50.0% | |
| CCTCCCGAACTTCATGTAAC+AGG | - | chr6.4:44201587-44201606 | MS.gene59292:intron | 50.0% | |
| CCTGGCCATGTTAGGGATAT+TGG | - | chr6.4:44203067-44203086 | MS.gene59292:CDS | 50.0% | |
| CCTGTTACATGAAGTTCGGG+AGG | + | chr6.4:44201590-44201609 | None:intergenic | 50.0% | |
| GGTAGAAGGAACTTCAGCGA+AGG | - | chr6.4:44202949-44202968 | MS.gene59292:intron | 50.0% | |
| GTCAATGTCTGTGTCGTGTC+CGG | + | chr6.4:44200081-44200100 | None:intergenic | 50.0% | |
| TAAGCCTGGATCTGTTCCTG+TGG | + | chr6.4:44200408-44200427 | None:intergenic | 50.0% | |
| TCATGGACCTGGCCATGTTA+GGG | - | chr6.4:44203060-44203079 | MS.gene59292:CDS | 50.0% | |
| TCCCAAGTAGACAACCCGTT+TGG | + | chr6.4:44202067-44202086 | None:intergenic | 50.0% | |
| TTCATTGCTCTCCGCACAGA+AGG | + | chr6.4:44201672-44201691 | None:intergenic | 50.0% | |
| TTTGCATTGTGTGTGGGTGC+AGG | - | chr6.4:44200296-44200315 | MS.gene59292:intron | 50.0% | |
| ! | CATCTGATCGAAGGCATGTC+CGG | - | chr6.4:44202571-44202590 | MS.gene59292:intron | 50.0% |
| ! | CTGCCGTGGACTACCTTAAT+AGG | - | chr6.4:44200866-44200885 | MS.gene59292:intron | 50.0% |
| ! | GCATCGACACATCTGATCGA+AGG | - | chr6.4:44202562-44202581 | MS.gene59292:intron | 50.0% |
| ! | GCCGTGGACTACCTTAATAG+GGG | - | chr6.4:44200868-44200887 | MS.gene59292:intron | 50.0% |
| !! | TGAGGTTGCCAAAGGTGTCA+TGG | - | chr6.4:44200696-44200715 | MS.gene59292:intron | 50.0% |
| ATGGACACTGACACGGACAC+CGG | - | chr6.4:44200059-44200078 | MS.gene59292:intron | 55.0% | |
| CTAACATGGCCAGGTCCATG+AGG | + | chr6.4:44203061-44203080 | None:intergenic | 55.0% | |
| CTCATGGACCTGGCCATGTT+AGG | - | chr6.4:44203059-44203078 | MS.gene59292:CDS | 55.0% | |
| GATTATCCGTGCCCCGATGT+CGG | + | chr6.4:44200160-44200179 | None:intergenic | 55.0% | |
| GTCGTGTCAGTGTCCGACAT+CGG | - | chr6.4:44200144-44200163 | MS.gene59292:intron | 55.0% | |
| TCGTGTCAGTGTCCGACATC+GGG | - | chr6.4:44200145-44200164 | MS.gene59292:intron | 55.0% | |
| TGTGTCCACGTCTCAGTGTC+CGG | - | chr6.4:44202671-44202690 | MS.gene59292:intron | 55.0% | |
| !! | ATAAGTGGTGGGTTCTGCCG+TGG | - | chr6.4:44200852-44200871 | MS.gene59292:intron | 55.0% |
| !!! | GTTTTTAGGCGGGGTTGGTG+TGG | - | chr6.4:44202865-44202884 | MS.gene59292:intron | 55.0% |
| ATCGGGGCACGGATAATCCG+AGG | - | chr6.4:44200162-44200181 | MS.gene59292:intron | 60.0% | |
| CGTGTCAGTGTCCGACATCG+GGG | - | chr6.4:44200146-44200165 | MS.gene59292:intron | 60.0% | |
| GCTCTCCGCACAGAAGGATC+AGG | + | chr6.4:44201666-44201685 | None:intergenic | 60.0% | |
| TGACACCGGACACTGAGACG+TGG | + | chr6.4:44202679-44202698 | None:intergenic | 60.0% | |
| CAGTGTCCGACATCGGGGCA+CGG | - | chr6.4:44200151-44200170 | MS.gene59292:intron | 65.0% | |
| !! | GGGTTGGTGTGGCAAGGCAG+AGG | - | chr6.4:44202876-44202895 | MS.gene59292:intron | 65.0% |
| !! | TAGGCGGGGTTGGTGTGGCA+AGG | - | chr6.4:44202870-44202889 | MS.gene59292:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 44198192 | 44203150 | 44198192 | ID=MS.gene59292 |
| chr6.4 | mRNA | 44198192 | 44203150 | 44198192 | ID=MS.gene59292.t1;Parent=MS.gene59292 |
| chr6.4 | exon | 44202980 | 44203150 | 44202980 | ID=MS.gene59292.t1.exon1;Parent=MS.gene59292.t1 |
| chr6.4 | CDS | 44202980 | 44203150 | 44202980 | ID=cds.MS.gene59292.t1;Parent=MS.gene59292.t1 |
| chr6.4 | exon | 44200904 | 44201024 | 44200904 | ID=MS.gene59292.t1.exon2;Parent=MS.gene59292.t1 |
| chr6.4 | CDS | 44200904 | 44201024 | 44200904 | ID=cds.MS.gene59292.t1;Parent=MS.gene59292.t1 |
| chr6.4 | exon | 44200610 | 44200701 | 44200610 | ID=MS.gene59292.t1.exon3;Parent=MS.gene59292.t1 |
| chr6.4 | CDS | 44200610 | 44200701 | 44200610 | ID=cds.MS.gene59292.t1;Parent=MS.gene59292.t1 |
| chr6.4 | exon | 44199637 | 44199733 | 44199637 | ID=MS.gene59292.t1.exon4;Parent=MS.gene59292.t1 |
| chr6.4 | CDS | 44199637 | 44199733 | 44199637 | ID=cds.MS.gene59292.t1;Parent=MS.gene59292.t1 |
| chr6.4 | exon | 44198192 | 44198565 | 44198192 | ID=MS.gene59292.t1.exon5;Parent=MS.gene59292.t1 |
| chr6.4 | CDS | 44198192 | 44198565 | 44198192 | ID=cds.MS.gene59292.t1;Parent=MS.gene59292.t1 |
| Gene Sequence |
| Protein sequence |
