Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60631.t1 | XP_003592178.1 | 87.3 | 332 | 16 | 5 | 1 | 325 | 1 | 313 | 1.60E-144 | 522.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60631.t1 | Q9FLX4 | 31.8 | 321 | 155 | 12 | 1 | 305 | 1 | 273 | 1.2e-20 | 102.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60631.t1 | G7IDX6 | 87.3 | 332 | 16 | 5 | 1 | 325 | 1 | 313 | 1.1e-144 | 522.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene60631 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene60631 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene60631 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene60631 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene60631 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene050119 | MS.gene60631 | 0.834116 | 3.61E-56 | -1.69E-46 |
| MS.gene05016 | MS.gene60631 | 0.820611 | 6.26E-53 | -1.69E-46 |
| MS.gene050355 | MS.gene60631 | 0.806829 | 6.80E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene60631 | 0.815008 | 1.15E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene60631 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene60631 | 0.811636 | 6.34E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene60631 | 0.808774 | 2.63E-50 | -1.69E-46 |
| MS.gene050605 | MS.gene60631 | 0.804066 | 2.58E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene60631 | 0.825107 | 5.61E-54 | -1.69E-46 |
| MS.gene050844 | MS.gene60631 | 0.807672 | 4.51E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene60631 | 0.81074 | 9.92E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene60631 | 0.846401 | 2.22E-59 | -1.69E-46 |
| MS.gene052012 | MS.gene60631 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene60631 | 0.802685 | 4.99E-49 | -1.69E-46 |
| MS.gene05215 | MS.gene60631 | 0.803077 | 4.14E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene60631 | 0.811609 | 6.43E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene60631 | 0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene60631 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene60631 | 0.815787 | 7.73E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene60631 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene60631 | 0.819843 | 9.38E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene60631 | 0.841285 | 5.21E-58 | -1.69E-46 |
| MS.gene05414 | MS.gene60631 | 0.804011 | 2.65E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene60631 | 0.817948 | 2.53E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene60631 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene60631 | 0.826587 | 2.50E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene60631 | 0.812253 | 4.65E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene60631 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene60631 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene60631 | 0.826769 | 2.26E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene60631 | 0.801139 | 1.04E-48 | -1.69E-46 |
| MS.gene055230 | MS.gene60631 | 0.804421 | 2.18E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene60631 | 0.809798 | 1.58E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene60631 | 0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene60631 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene60631 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene60631 | 0.815248 | 1.02E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene60631 | 0.836153 | 1.11E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene60631 | 0.823696 | 1.21E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene60631 | 0.8078 | 4.23E-50 | -1.69E-46 |
| MS.gene056498 | MS.gene60631 | 0.810146 | 1.33E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene60631 | 0.820971 | 5.17E-53 | -1.69E-46 |
| MS.gene056553 | MS.gene60631 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene60631 | 0.802218 | 6.23E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene60631 | 0.850009 | 2.24E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene60631 | 0.821698 | 3.52E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene60631 | 0.815458 | 9.15E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene60631 | 0.841685 | 4.09E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene60631 | 0.805999 | 1.02E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene60631 | 0.815976 | 7.01E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene60631 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene059161 | MS.gene60631 | 0.80786 | 4.11E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene60631 | 0.828341 | 9.49E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene60631 | 0.81297 | 3.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60631.t1 | MTR_1g099550 | 87.349 | 332 | 16 | 5 | 1 | 325 | 1 | 313 | 0.0 | 563 |
| MS.gene60631.t1 | MTR_8g099045 | 30.447 | 358 | 164 | 13 | 1 | 295 | 1 | 336 | 3.09e-30 | 118 |
| MS.gene60631.t1 | MTR_5g009870 | 40.444 | 225 | 93 | 12 | 104 | 300 | 159 | 370 | 5.09e-30 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60631.t1 | AT5G52870 | 33.546 | 313 | 147 | 11 | 1 | 299 | 1 | 266 | 1.41e-33 | 125 |
| MS.gene60631.t1 | AT5G52870 | 33.546 | 313 | 147 | 11 | 1 | 299 | 1 | 266 | 1.95e-33 | 125 |
| MS.gene60631.t1 | AT1G64080 | 49.206 | 126 | 45 | 4 | 193 | 300 | 266 | 390 | 7.48e-22 | 95.5 |
Find 58 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAACTCGCTCTGTTT+TGG | 0.159958 | 1.2:+69723388 | None:intergenic |
| CTTTAAACTTCCTCAAGTTC+TGG | 0.310344 | 1.2:-69723931 | MS.gene60631:CDS |
| GAAACTTTGGTAGCAAAATT+CGG | 0.358487 | 1.2:-69723430 | MS.gene60631:CDS |
| GATTAAGCCTCTTTATGTTA+AGG | 0.375290 | 1.2:-69723339 | MS.gene60631:CDS |
| TTTGTTGTCGAAATCATTCA+TGG | 0.384507 | 1.2:+69723808 | None:intergenic |
| TTCGAAACCTTAACATAAAG+AGG | 0.384723 | 1.2:+69723332 | None:intergenic |
| CACCGGCGGTTGGCTCTTTG+AGG | 0.387789 | 1.2:-69723244 | MS.gene60631:CDS |
| GAAAGTGGTGACGAAGCATT+TGG | 0.391796 | 1.2:-69723189 | MS.gene60631:CDS |
| TTGGACATGTGGGTCGTCAT+TGG | 0.416385 | 1.2:+69723784 | None:intergenic |
| ATGGATGTTGTTGGTGGTGA+TGG | 0.423562 | 1.2:-69722903 | MS.gene60631:CDS |
| GAGCTTGTTCTCCGGCGAAC+AGG | 0.426734 | 1.2:-69723136 | MS.gene60631:CDS |
| TTCAGAAAACAGAGAAGAAC+TGG | 0.432309 | 1.2:-69723572 | MS.gene60631:CDS |
| GGTAGCAAAATTCGGAATCA+AGG | 0.437082 | 1.2:-69723422 | MS.gene60631:CDS |
| GATTCTTCAATGGATGTTGT+TGG | 0.446904 | 1.2:-69722912 | MS.gene60631:CDS |
| AGGTCGTCGGGTACGGTGGC+CGG | 0.454518 | 1.2:-69723158 | MS.gene60631:CDS |
| GAGAACAGCACAAGAAACTT+TGG | 0.457374 | 1.2:-69723443 | MS.gene60631:CDS |
| TGCTGATCTTAGAAGTGAAA+TGG | 0.459585 | 1.2:+69723616 | None:intergenic |
| TTCGAAGAGGTACGGTGATA+AGG | 0.465764 | 1.2:-69723315 | MS.gene60631:CDS |
| TGCTTCGCCGTCGTCGTCAC+CGG | 0.472585 | 1.2:-69723261 | MS.gene60631:CDS |
| TAAGAGTAGGTCGTCGGGTA+CGG | 0.475412 | 1.2:-69723165 | MS.gene60631:CDS |
| GGTGATAAGGTGAAATTCTC+CGG | 0.507388 | 1.2:-69723302 | MS.gene60631:CDS |
| CTGTTCTCTCTACTAAGCAT+TGG | 0.523196 | 1.2:+69723458 | None:intergenic |
| GTCACCACTTTCATCCCAGC+CGG | 0.525414 | 1.2:+69723200 | None:intergenic |
| AAAGTGGTGACGAAGCATTT+GGG | 0.526267 | 1.2:-69723188 | MS.gene60631:CDS |
| AAGATGAGGAACAGTGATGT+TGG | 0.527025 | 1.2:+69723889 | None:intergenic |
| GAGGAAGTTTAAAGCATCCA+TGG | 0.529668 | 1.2:+69723940 | None:intergenic |
| AGCTACCGTCATCCCCTCGC+CGG | 0.534216 | 1.2:+69723283 | None:intergenic |
| CAAAACAGAGCGAGTTTCAA+AGG | 0.536455 | 1.2:-69723387 | MS.gene60631:CDS |
| TGTTGTTCTTCCAGAACTTG+AGG | 0.537675 | 1.2:+69723921 | None:intergenic |
| GTTAAGGTTTCGAAGAGGTA+CGG | 0.540829 | 1.2:-69723323 | MS.gene60631:CDS |
| TTGGGTAAGAGTAGGTCGTC+GGG | 0.544095 | 1.2:-69723170 | MS.gene60631:CDS |
| CCGTCGTCGTCACCGGCGGT+TGG | 0.545238 | 1.2:-69723254 | MS.gene60631:CDS |
| AAGGTGAAATTCTCCGGCGA+GGG | 0.550532 | 1.2:-69723296 | MS.gene60631:CDS |
| AAGGTAAAGATTCTGAAACT+TGG | 0.555444 | 1.2:+69723593 | None:intergenic |
| TTCCTCAAAGAGCCAACCGC+CGG | 0.558224 | 1.2:+69723242 | None:intergenic |
| AGAAGTGAAATGGGTGATTG+TGG | 0.566819 | 1.2:+69723626 | None:intergenic |
| GGTGGCCGGAGCTTGTTCTC+CGG | 0.566890 | 1.2:-69723144 | MS.gene60631:CDS |
| ATTCTCCGGCGAGGGGATGA+CGG | 0.568736 | 1.2:-69723288 | MS.gene60631:CDS |
| GCTGATCTTAGAAGTGAAAT+GGG | 0.571175 | 1.2:+69723617 | None:intergenic |
| CGAAGCATTTGGGTAAGAGT+AGG | 0.585768 | 1.2:-69723178 | MS.gene60631:CDS |
| TTTGGGTAAGAGTAGGTCGT+CGG | 0.592489 | 1.2:-69723171 | MS.gene60631:CDS |
| ACGCTGTTGCAGCAACATGA+TGG | 0.598349 | 1.2:-69723104 | MS.gene60631:CDS |
| GTATCATCACTCCTGTTCGC+CGG | 0.598908 | 1.2:+69723125 | None:intergenic |
| TCTTCAATGGATGTTGTTGG+TGG | 0.599000 | 1.2:-69722909 | MS.gene60631:CDS |
| GTTCGCCGGAGAACAAGCTC+CGG | 0.605965 | 1.2:+69723139 | None:intergenic |
| TTCGCCGTCGTCGTCACCGG+CGG | 0.615008 | 1.2:-69723258 | MS.gene60631:CDS |
| GAGTAGGTCGTCGGGTACGG+TGG | 0.623063 | 1.2:-69723162 | MS.gene60631:CDS |
| CCAACCGCCGGTGACGACGA+CGG | 0.626873 | 1.2:+69723254 | None:intergenic |
| CTTTGAGGAAAGAGAAACAC+GGG | 0.634887 | 1.2:-69723229 | MS.gene60631:CDS |
| TCTGTTTCTACAACAAGATG+AGG | 0.645146 | 1.2:+69723875 | None:intergenic |
| AAGAGATCCTTCAATTCCAG+AGG | 0.646564 | 1.2:-69723056 | MS.gene60631:intron |
| AGGTGAAATTCTCCGGCGAG+GGG | 0.653189 | 1.2:-69723295 | MS.gene60631:CDS |
| GAATCAGAAGAAAGAAACCA+AGG | 0.653413 | 1.2:-69723525 | MS.gene60631:CDS |
| TAAGGTGAAATTCTCCGGCG+AGG | 0.664840 | 1.2:-69723297 | MS.gene60631:CDS |
| ATGAGGAACAGTGATGTTGG+AGG | 0.666650 | 1.2:+69723892 | None:intergenic |
| TTTATGTTAAGGTTTCGAAG+AGG | 0.679040 | 1.2:-69723328 | MS.gene60631:CDS |
| AATTCGGAATCAAGGAACAG+AGG | 0.681760 | 1.2:-69723414 | MS.gene60631:CDS |
| TCTTTGAGGAAAGAGAAACA+CGG | 0.735127 | 1.2:-69723230 | MS.gene60631:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATGATTATTTTTGAA+AGG | - | chr1.2:69723806-69723825 | MS.gene60631:CDS | 10.0% |
| !!! | ATAATTTTCAGATTCTTCAA+TGG | - | chr1.2:69723876-69723895 | MS.gene60631:CDS | 20.0% |
| !! | TTCAACAAGAAATTCTTTTG+AGG | - | chr1.2:69723927-69723946 | MS.gene60631:CDS | 25.0% |
| !!! | ATAAGAAGTGTTGTTTTTTG+AGG | + | chr1.2:69723094-69723113 | None:intergenic | 25.0% |
| GATTAAGCCTCTTTATGTTA+AGG | - | chr1.2:69723459-69723478 | MS.gene60631:CDS | 30.0% | |
| TAGTTTCACAGAAAAAACCT+TGG | + | chr1.2:69723293-69723312 | None:intergenic | 30.0% | |
| TTCGAAACCTTAACATAAAG+AGG | + | chr1.2:69723469-69723488 | None:intergenic | 30.0% | |
| TTTATGTTAAGGTTTCGAAG+AGG | - | chr1.2:69723470-69723489 | MS.gene60631:CDS | 30.0% | |
| ! | GAAACTTTGGTAGCAAAATT+CGG | - | chr1.2:69723368-69723387 | MS.gene60631:CDS | 30.0% |
| ! | GTTTTCTGTTTTGTGAGTTT+TGG | + | chr1.2:69723041-69723060 | None:intergenic | 30.0% |
| ! | TGTGAAACAAATTTTACCTC+TGG | + | chr1.2:69723761-69723780 | None:intergenic | 30.0% |
| ! | TTTGTTGTCGAAATCATTCA+TGG | + | chr1.2:69722993-69723012 | None:intergenic | 30.0% |
| !! | AAGGTAAAGATTCTGAAACT+TGG | + | chr1.2:69723208-69723227 | None:intergenic | 30.0% |
| !! | ATTAGTTTCAGTTTTCTCGT+AGG | + | chr1.2:69723068-69723087 | None:intergenic | 30.0% |
| !!! | AATTTTACCTCTGGAATTGA+AGG | + | chr1.2:69723752-69723771 | None:intergenic | 30.0% |
| !!! | AGCACTTTTCTTTTTGAGAT+AGG | + | chr1.2:69723130-69723149 | None:intergenic | 30.0% |
| CTTTAAACTTCCTCAAGTTC+TGG | - | chr1.2:69722867-69722886 | MS.gene60631:CDS | 35.0% | |
| GAATCAGAAGAAAGAAACCA+AGG | - | chr1.2:69723273-69723292 | MS.gene60631:CDS | 35.0% | |
| GATTCTTCAATGGATGTTGT+TGG | - | chr1.2:69723886-69723905 | MS.gene60631:CDS | 35.0% | |
| GCTGATCTTAGAAGTGAAAT+GGG | + | chr1.2:69723184-69723203 | None:intergenic | 35.0% | |
| TGCTGATCTTAGAAGTGAAA+TGG | + | chr1.2:69723185-69723204 | None:intergenic | 35.0% | |
| TTCAGAAAACAGAGAAGAAC+TGG | - | chr1.2:69723226-69723245 | MS.gene60631:CDS | 35.0% | |
| ! | AGTTCTTCTCTGTTTTCTGA+AGG | + | chr1.2:69723227-69723246 | None:intergenic | 35.0% |
| ! | TCTTTGAGGAAAGAGAAACA+CGG | - | chr1.2:69723568-69723587 | MS.gene60631:CDS | 35.0% |
| !! | TCTGTTTCTACAACAAGATG+AGG | + | chr1.2:69722926-69722945 | None:intergenic | 35.0% |
| !! | TTTGAAACTCGCTCTGTTTT+GGG | + | chr1.2:69723412-69723431 | None:intergenic | 35.0% |
| !!! | CTGTTTTGTGAGTTTTGGTT+TGG | + | chr1.2:69723036-69723055 | None:intergenic | 35.0% |
| !!! | CTTTTTGAGATAGGTTCGTT+TGG | + | chr1.2:69723121-69723140 | None:intergenic | 35.0% |
| !!! | GGTGATTGTGGTTTTGAAAT+GGG | + | chr1.2:69723163-69723182 | None:intergenic | 35.0% |
| !!! | GGTTTTGAAATGGGTTCAAT+TGG | + | chr1.2:69723154-69723173 | None:intergenic | 35.0% |
| AAGAGATCCTTCAATTCCAG+AGG | - | chr1.2:69723742-69723761 | MS.gene60631:CDS | 40.0% | |
| AAGATGAGGAACAGTGATGT+TGG | + | chr1.2:69722912-69722931 | None:intergenic | 40.0% | |
| AATTCGGAATCAAGGAACAG+AGG | - | chr1.2:69723384-69723403 | MS.gene60631:CDS | 40.0% | |
| AGAAGTGAAATGGGTGATTG+TGG | + | chr1.2:69723175-69723194 | None:intergenic | 40.0% | |
| CAAAACAGAGCGAGTTTCAA+AGG | - | chr1.2:69723411-69723430 | MS.gene60631:CDS | 40.0% | |
| CTGTTCTCTCTACTAAGCAT+TGG | + | chr1.2:69723343-69723362 | None:intergenic | 40.0% | |
| GAGAACAGCACAAGAAACTT+TGG | - | chr1.2:69723355-69723374 | MS.gene60631:CDS | 40.0% | |
| GGTAGCAAAATTCGGAATCA+AGG | - | chr1.2:69723376-69723395 | MS.gene60631:CDS | 40.0% | |
| GGTGATAAGGTGAAATTCTC+CGG | - | chr1.2:69723496-69723515 | MS.gene60631:CDS | 40.0% | |
| GTTAAGGTTTCGAAGAGGTA+CGG | - | chr1.2:69723475-69723494 | MS.gene60631:CDS | 40.0% | |
| TCTTCAATGGATGTTGTTGG+TGG | - | chr1.2:69723889-69723908 | MS.gene60631:CDS | 40.0% | |
| TGTTGTTCTTCCAGAACTTG+AGG | + | chr1.2:69722880-69722899 | None:intergenic | 40.0% | |
| ! | AAAGTGGTGACGAAGCATTT+GGG | - | chr1.2:69723610-69723629 | MS.gene60631:CDS | 40.0% |
| ! | CTTTGAGGAAAGAGAAACAC+GGG | - | chr1.2:69723569-69723588 | MS.gene60631:CDS | 40.0% |
| !!! | CTTTGAAACTCGCTCTGTTT+TGG | + | chr1.2:69723413-69723432 | None:intergenic | 40.0% |
| !!! | GAGTTTTGGTTTGGACATGT+GGG | + | chr1.2:69723027-69723046 | None:intergenic | 40.0% |
| !!! | GGGTGATTGTGGTTTTGAAA+TGG | + | chr1.2:69723164-69723183 | None:intergenic | 40.0% |
| !!! | TGAGTTTTGGTTTGGACATG+TGG | + | chr1.2:69723028-69723047 | None:intergenic | 40.0% |
| ATGAGGAACAGTGATGTTGG+AGG | + | chr1.2:69722909-69722928 | None:intergenic | 45.0% | |
| TTTGGGTAAGAGTAGGTCGT+CGG | - | chr1.2:69723627-69723646 | MS.gene60631:CDS | 45.0% | |
| ! | AGAGAAACACGGGAGTTTTC+CGG | - | chr1.2:69723579-69723598 | MS.gene60631:CDS | 45.0% |
| ! | CGAAGCATTTGGGTAAGAGT+AGG | - | chr1.2:69723620-69723639 | MS.gene60631:CDS | 45.0% |
| ! | GAAAGTGGTGACGAAGCATT+TGG | - | chr1.2:69723609-69723628 | MS.gene60631:CDS | 45.0% |
| ! | TTCGAAGAGGTACGGTGATA+AGG | - | chr1.2:69723483-69723502 | MS.gene60631:CDS | 45.0% |
| !! | ATGGATGTTGTTGGTGGTGA+TGG | - | chr1.2:69723895-69723914 | MS.gene60631:CDS | 45.0% |
| AAGGTGAAATTCTCCGGCGA+GGG | - | chr1.2:69723502-69723521 | MS.gene60631:CDS | 50.0% | |
| ACGCTGTTGCAGCAACATGA+TGG | - | chr1.2:69723694-69723713 | MS.gene60631:CDS | 50.0% | |
| GTATCATCACTCCTGTTCGC+CGG | + | chr1.2:69723676-69723695 | None:intergenic | 50.0% | |
| TAAGAGTAGGTCGTCGGGTA+CGG | - | chr1.2:69723633-69723652 | MS.gene60631:CDS | 50.0% | |
| TAAGGTGAAATTCTCCGGCG+AGG | - | chr1.2:69723501-69723520 | MS.gene60631:CDS | 50.0% | |
| TTGGACATGTGGGTCGTCAT+TGG | + | chr1.2:69723017-69723036 | None:intergenic | 50.0% | |
| TTGGGTAAGAGTAGGTCGTC+GGG | - | chr1.2:69723628-69723647 | MS.gene60631:CDS | 50.0% | |
| ! | TTTTCCGGCTGGGATGAAAG+TGG | - | chr1.2:69723594-69723613 | MS.gene60631:CDS | 50.0% |
| AGGTGAAATTCTCCGGCGAG+GGG | - | chr1.2:69723503-69723522 | MS.gene60631:CDS | 55.0% | |
| GTCACCACTTTCATCCCAGC+CGG | + | chr1.2:69723601-69723620 | None:intergenic | 55.0% | |
| TTCCTCAAAGAGCCAACCGC+CGG | + | chr1.2:69723559-69723578 | None:intergenic | 55.0% | |
| ! | AAACACGGGAGTTTTCCGGC+TGG | - | chr1.2:69723583-69723602 | MS.gene60631:CDS | 55.0% |
| ! | AACACGGGAGTTTTCCGGCT+GGG | - | chr1.2:69723584-69723603 | MS.gene60631:CDS | 55.0% |
| ATTCTCCGGCGAGGGGATGA+CGG | - | chr1.2:69723510-69723529 | MS.gene60631:CDS | 60.0% | |
| GTTCGCCGGAGAACAAGCTC+CGG | + | chr1.2:69723662-69723681 | None:intergenic | 60.0% | |
| ! | GAGCTTGTTCTCCGGCGAAC+AGG | - | chr1.2:69723662-69723681 | MS.gene60631:CDS | 60.0% |
| AGCTACCGTCATCCCCTCGC+CGG | + | chr1.2:69723518-69723537 | None:intergenic | 65.0% | |
| GAGTAGGTCGTCGGGTACGG+TGG | - | chr1.2:69723636-69723655 | MS.gene60631:CDS | 65.0% | |
| TGCTTCGCCGTCGTCGTCAC+CGG | - | chr1.2:69723537-69723556 | MS.gene60631:CDS | 65.0% | |
| ! | CACCGGCGGTTGGCTCTTTG+AGG | - | chr1.2:69723554-69723573 | MS.gene60631:CDS | 65.0% |
| ! | GGTGGCCGGAGCTTGTTCTC+CGG | - | chr1.2:69723654-69723673 | MS.gene60631:CDS | 65.0% |
| AGGTCGTCGGGTACGGTGGC+CGG | - | chr1.2:69723640-69723659 | MS.gene60631:CDS | 70.0% | |
| CCAACCGCCGGTGACGACGA+CGG | + | chr1.2:69723547-69723566 | None:intergenic | 70.0% | |
| TTCGCCGTCGTCGTCACCGG+CGG | - | chr1.2:69723540-69723559 | MS.gene60631:CDS | 70.0% | |
| CCGTCGTCGTCACCGGCGGT+TGG | - | chr1.2:69723544-69723563 | MS.gene60631:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 69722860 | 69723960 | 69722860 | ID=MS.gene60631 |
| chr1.2 | mRNA | 69722860 | 69723960 | 69722860 | ID=MS.gene60631.t1;Parent=MS.gene60631 |
| chr1.2 | exon | 69723057 | 69723960 | 69723057 | ID=MS.gene60631.t1.exon1;Parent=MS.gene60631.t1 |
| chr1.2 | CDS | 69723057 | 69723960 | 69723057 | ID=cds.MS.gene60631.t1;Parent=MS.gene60631.t1 |
| chr1.2 | exon | 69722860 | 69722933 | 69722860 | ID=MS.gene60631.t1.exon2;Parent=MS.gene60631.t1 |
| chr1.2 | CDS | 69722860 | 69722933 | 69722860 | ID=cds.MS.gene60631.t1;Parent=MS.gene60631.t1 |
| Gene Sequence |
| Protein sequence |
