AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61558


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61558.t1 MTR_8g027260 73.762 606 104 6 1 560 59 655 0.0 872
MS.gene61558.t1 MTR_8g005710 97.051 373 11 0 188 560 330 702 0.0 742
MS.gene61558.t1 MTR_8g005710 89.175 194 13 1 1 186 19 212 8.10e-117 362
MS.gene61558.t1 MTR_2g042650 54.067 627 182 12 1 560 59 646 0.0 608
MS.gene61558.t1 MTR_7g034380 79.245 371 77 0 187 557 322 692 0.0 603
MS.gene61558.t1 MTR_7g034380 77.540 187 41 1 1 186 19 205 6.96e-98 312
MS.gene61558.t1 MTR_3g010080 70.822 377 105 5 187 560 361 735 0.0 528
MS.gene61558.t1 MTR_3g010080 72.826 184 49 1 1 183 58 241 9.29e-88 286
MS.gene61558.t1 MTR_6g055570 71.698 371 99 4 193 559 364 732 5.89e-180 525
MS.gene61558.t1 MTR_6g055570 77.174 184 41 1 1 183 59 242 3.75e-93 301
MS.gene61558.t1 MTR_8g006680 68.883 376 104 4 187 559 360 725 4.52e-178 520
MS.gene61558.t1 MTR_8g006680 60.300 267 76 6 1 251 57 309 3.99e-92 298
MS.gene61558.t1 MTR_8g005300 68.883 376 104 4 187 559 360 725 4.52e-178 520
MS.gene61558.t1 MTR_8g005300 60.300 267 76 6 1 251 57 309 3.99e-92 298
MS.gene61558.t1 MTR_8g005640 68.883 376 104 4 187 559 360 725 4.52e-178 520
MS.gene61558.t1 MTR_8g005640 60.300 267 76 6 1 251 57 309 3.99e-92 298
MS.gene61558.t1 MTR_1g048110 69.231 377 109 4 188 560 361 734 8.81e-177 517
MS.gene61558.t1 MTR_1g048110 74.194 186 47 1 1 185 59 244 2.89e-91 296
MS.gene61558.t1 MTR_6g055410 69.705 373 89 5 192 560 363 715 2.06e-173 508
MS.gene61558.t1 MTR_6g055410 76.630 184 42 1 1 183 59 242 2.30e-92 298
MS.gene61558.t1 MTR_1g007030 68.435 377 114 4 187 560 362 736 1.21e-171 504
MS.gene61558.t1 MTR_1g007030 72.487 189 51 1 1 188 59 247 3.97e-89 290
MS.gene61558.t1 MTR_1g006990 68.254 378 113 3 188 560 363 738 2.45e-169 498
MS.gene61558.t1 MTR_1g006990 70.899 189 54 1 1 188 59 247 5.28e-87 285
MS.gene61558.t1 MTR_2g044630 64.611 373 109 4 187 557 355 706 9.97e-162 478
MS.gene61558.t1 MTR_2g044630 70.270 185 47 2 1 184 59 236 4.79e-83 273
MS.gene61558.t1 MTR_2g042640 63.174 334 87 5 188 519 312 611 6.03e-137 411
MS.gene61558.t1 MTR_2g042640 73.410 173 45 1 13 184 40 212 1.10e-84 275
MS.gene61558.t1 MTR_3g452290 59.309 376 82 5 187 560 266 572 1.21e-136 409
MS.gene61558.t1 MTR_3g452290 75.000 144 35 1 41 183 1 144 3.05e-67 228
MS.gene61558.t1 MTR_3g451220 59.309 376 82 5 187 560 266 572 1.21e-136 409
MS.gene61558.t1 MTR_3g451220 75.000 144 35 1 41 183 1 144 3.05e-67 228
MS.gene61558.t1 MTR_2g070260 72.081 197 52 2 351 546 1 195 4.25e-97 294
MS.gene61558.t1 MTR_8g022870 39.895 381 201 8 203 556 396 775 1.38e-73 249
MS.gene61558.t1 MTR_8g022870 41.146 192 92 3 13 183 63 254 2.17e-36 145
MS.gene61558.t1 MTR_4g103495 39.950 398 197 12 183 557 246 624 1.05e-70 239
MS.gene61558.t1 MTR_4g103495 44.248 113 46 3 88 183 3 115 2.12e-22 101
MS.gene61558.t1 MTR_7g075890 39.474 380 212 8 184 558 533 899 1.76e-70 243
MS.gene61558.t1 MTR_7g075890 47.253 182 87 2 11 183 225 406 5.40e-45 171
MS.gene61558.t1 MTR_4g103480 40.591 372 191 11 207 557 425 787 1.20e-69 239
MS.gene61558.t1 MTR_4g103480 40.580 207 98 3 11 192 85 291 2.55e-41 159
MS.gene61558.t1 MTR_3g082200 38.360 378 202 12 203 559 267 634 7.55e-69 234
MS.gene61558.t1 MTR_3g082200 45.946 111 45 2 88 183 18 128 4.17e-24 107
MS.gene61558.t1 MTR_3g082200 38.360 378 202 12 203 559 282 649 7.71e-69 234
MS.gene61558.t1 MTR_3g082200 44.167 120 52 2 79 183 24 143 4.51e-26 113
MS.gene61558.t1 MTR_4g103450 39.628 376 189 11 207 557 382 744 1.61e-68 235
MS.gene61558.t1 MTR_4g103450 40.580 207 98 3 11 192 42 248 8.49e-42 160
MS.gene61558.t1 MTR_6g075370 45.174 259 137 4 288 545 421 675 2.21e-68 234
MS.gene61558.t1 MTR_6g075370 49.223 193 86 4 1 183 57 247 4.30e-53 192
MS.gene61558.t1 MTR_3g082200 38.360 378 202 12 203 559 405 772 4.58e-68 234
MS.gene61558.t1 MTR_3g082200 38.776 196 97 3 11 183 71 266 6.86e-37 146
MS.gene61558.t1 MTR_5g055920 38.830 376 192 10 207 557 305 667 7.92e-68 232
MS.gene61558.t1 MTR_5g055920 40.397 151 64 4 60 191 27 170 2.52e-23 104
MS.gene61558.t1 MTR_7g098070 38.402 388 199 10 188 556 395 761 9.74e-68 233
MS.gene61558.t1 MTR_7g098070 36.735 196 101 4 11 183 66 261 7.68e-35 140
MS.gene61558.t1 MTR_4g103430 40.054 372 195 11 206 557 406 769 2.07e-67 233
MS.gene61558.t1 MTR_4g103430 42.079 202 84 4 11 183 68 265 6.30e-41 158
MS.gene61558.t1 MTR_8g079900 37.366 372 215 7 190 556 285 643 2.90e-67 230
MS.gene61558.t1 MTR_8g079900 37.991 229 115 4 41 251 1 220 2.25e-36 144
MS.gene61558.t1 MTR_8g033150 37.093 399 225 7 161 556 349 724 5.33e-67 231
MS.gene61558.t1 MTR_8g033150 46.154 182 89 2 11 183 52 233 2.20e-41 159
MS.gene61558.t1 MTR_4g103490 40.401 349 174 9 224 557 455 784 5.76e-67 232
MS.gene61558.t1 MTR_4g103490 41.837 196 91 4 11 183 72 267 5.49e-39 152
MS.gene61558.t1 MTR_8g033150 37.093 399 225 7 161 556 376 751 9.25e-67 231
MS.gene61558.t1 MTR_8g033150 46.154 182 89 2 11 183 79 260 3.62e-41 159
MS.gene61558.t1 MTR_8g079900 37.366 372 215 7 190 556 383 741 1.07e-66 230
MS.gene61558.t1 MTR_8g079900 38.610 259 132 4 11 251 69 318 4.68e-45 170
MS.gene61558.t1 MTR_7g104200 40.921 369 202 10 198 556 379 741 1.30e-66 230
MS.gene61558.t1 MTR_7g104200 50.000 182 82 2 11 183 67 248 1.53e-49 183
MS.gene61558.t1 MTR_3g061110 36.434 387 217 9 188 558 381 754 1.99e-66 230
MS.gene61558.t1 MTR_3g061110 42.021 188 88 5 11 178 68 254 1.49e-35 142
MS.gene61558.t1 MTR_4g103400 41.429 350 178 10 218 550 430 769 7.96e-66 229
MS.gene61558.t1 MTR_4g103400 39.698 199 94 5 11 183 68 266 7.89e-38 149
MS.gene61558.t1 MTR_4g134320 38.182 385 204 10 188 556 399 765 9.76e-66 228
MS.gene61558.t1 MTR_4g134320 35.859 198 101 4 11 183 69 265 1.96e-34 139
MS.gene61558.t1 MTR_7g075900 38.770 374 198 10 207 556 405 771 3.08e-65 227
MS.gene61558.t1 MTR_7g075900 38.095 189 98 3 14 183 79 267 5.86e-31 128
MS.gene61558.t1 MTR_1g102350 36.009 436 235 14 148 559 364 779 5.15e-65 226
MS.gene61558.t1 MTR_1g102350 38.306 248 121 6 9 234 75 312 2.31e-40 156
MS.gene61558.t1 MTR_2g070250 44.847 359 133 14 1 306 59 405 5.87e-65 218
MS.gene61558.t1 MTR_5g096750 39.594 394 183 15 189 557 402 765 1.44e-64 225
MS.gene61558.t1 MTR_5g096750 41.553 219 99 8 1 191 61 278 1.21e-38 151
MS.gene61558.t1 MTR_3g102810 39.189 370 193 10 212 554 388 752 1.68e-64 224
MS.gene61558.t1 MTR_3g102810 34.146 246 131 5 18 242 61 296 6.49e-31 128
MS.gene61558.t1 MTR_4g073540 35.648 432 236 11 152 559 357 770 2.72e-64 224
MS.gene61558.t1 MTR_4g073540 36.816 201 102 3 12 187 60 260 4.35e-34 138
MS.gene61558.t1 MTR_5g016120 38.859 368 203 9 207 555 395 759 4.07e-64 224
MS.gene61558.t1 MTR_5g016120 31.515 330 177 7 3 294 57 375 4.20e-37 147
MS.gene61558.t1 MTR_5g085690 41.971 274 145 5 291 556 521 788 6.24e-63 221
MS.gene61558.t1 MTR_5g085690 34.532 278 135 10 11 248 69 339 1.70e-34 139
MS.gene61558.t1 MTR_4g095360 35.092 436 237 16 146 557 342 755 9.84e-63 220
MS.gene61558.t1 MTR_4g095360 36.948 249 120 6 2 229 55 287 1.30e-36 145
MS.gene61558.t1 MTR_7g081420 42.857 280 140 9 291 558 515 786 3.32e-62 219
MS.gene61558.t1 MTR_7g081420 36.555 238 120 8 11 224 72 302 2.24e-36 145
MS.gene61558.t1 MTR_4g103495 41.159 345 171 10 183 510 395 724 4.11e-62 218
MS.gene61558.t1 MTR_4g103495 39.000 200 91 5 11 183 69 264 8.64e-37 146
MS.gene61558.t1 MTR_7g098630 37.867 375 200 11 207 554 390 758 1.46e-61 218
MS.gene61558.t1 MTR_7g098630 38.500 200 103 4 3 183 54 252 4.23e-33 135
MS.gene61558.t1 MTR_7g081580 44.286 280 136 10 291 558 514 785 4.02e-61 216
MS.gene61558.t1 MTR_7g081580 35.565 239 123 8 11 225 72 303 7.16e-35 140
MS.gene61558.t1 MTR_0047s0120 37.158 366 210 8 207 554 391 754 7.31e-61 214
MS.gene61558.t1 MTR_0047s0120 31.118 331 169 9 3 290 53 367 1.95e-35 142
MS.gene61558.t1 MTR_4g053630 36.388 371 210 8 207 560 295 656 3.18e-60 211
MS.gene61558.t1 MTR_4g053630 48.344 151 56 3 55 183 4 154 1.36e-35 142
MS.gene61558.t1 MTR_8g083220 34.959 369 212 8 207 559 421 777 6.36e-60 212
MS.gene61558.t1 MTR_8g083220 43.541 209 92 5 1 183 66 274 7.59e-41 158
MS.gene61558.t1 MTR_4g053630 36.388 371 210 8 207 560 372 733 1.43e-59 211
MS.gene61558.t1 MTR_4g053630 45.408 196 85 3 10 183 36 231 1.14e-45 172
MS.gene61558.t1 MTR_4g102400 39.335 361 191 9 214 556 402 752 3.33e-59 210
MS.gene61558.t1 MTR_4g102400 38.378 185 103 5 9 183 74 257 8.79e-29 121
MS.gene61558.t1 MTR_1g018510 36.243 378 211 8 205 554 348 723 2.63e-58 207
MS.gene61558.t1 MTR_1g018510 33.200 250 136 5 14 242 24 263 2.50e-34 138
MS.gene61558.t1 MTR_7g081750 44.086 279 138 9 291 558 528 799 2.81e-58 208
MS.gene61558.t1 MTR_7g081750 35.802 243 125 8 11 229 71 306 5.48e-38 149
MS.gene61558.t1 MTR_8g042670 36.413 368 211 9 207 557 273 634 4.40e-58 205
MS.gene61558.t1 MTR_8g042670 53.704 108 44 2 82 183 21 128 5.33e-29 122
MS.gene61558.t1 MTR_8g021130 37.995 379 200 13 207 557 404 775 4.65e-58 207
MS.gene61558.t1 MTR_8g021130 33.673 196 105 6 15 185 75 270 8.73e-20 94.0
MS.gene61558.t1 MTR_7g481600 41.935 279 144 8 291 558 514 785 6.00e-58 207
MS.gene61558.t1 MTR_7g481600 35.565 239 123 8 11 225 72 303 1.26e-34 139
MS.gene61558.t1 MTR_5g025010 36.031 383 208 11 197 557 351 718 1.30e-57 205
MS.gene61558.t1 MTR_5g025010 42.233 206 96 5 1 183 20 225 1.13e-39 154
MS.gene61558.t1 MTR_5g025010 36.031 383 208 11 197 557 383 750 1.70e-57 205
MS.gene61558.t1 MTR_5g025010 42.233 206 96 5 1 183 52 257 1.24e-39 154
MS.gene61558.t1 MTR_8g042670 36.413 368 211 9 207 557 397 758 3.97e-57 204
MS.gene61558.t1 MTR_8g042670 48.205 195 89 4 1 183 58 252 1.45e-48 180
MS.gene61558.t1 MTR_7g081500 35.872 407 198 17 189 558 404 784 4.05e-57 204
MS.gene61558.t1 MTR_7g081500 36.402 239 121 8 10 224 70 301 4.98e-37 147
MS.gene61558.t1 MTR_4g125180 36.000 375 210 11 203 554 382 749 1.50e-56 202
MS.gene61558.t1 MTR_4g125180 39.423 208 104 4 1 186 44 251 6.87e-37 146
MS.gene61558.t1 MTR_8g072440 34.511 368 207 9 207 557 361 711 1.97e-56 202
MS.gene61558.t1 MTR_8g072440 41.827 208 89 5 1 183 20 220 5.43e-40 155
MS.gene61558.t1 MTR_7g081380 42.500 280 142 7 291 558 536 808 2.08e-56 203
MS.gene61558.t1 MTR_7g081380 38.095 231 112 8 10 214 71 296 1.11e-36 145
MS.gene61558.t1 MTR_2g042130 35.733 375 211 11 203 554 403 770 3.39e-56 202
MS.gene61558.t1 MTR_2g042130 38.525 244 116 6 15 234 77 310 1.54e-39 154
MS.gene61558.t1 MTR_8g072440 34.511 368 207 9 207 557 403 753 4.16e-56 201
MS.gene61558.t1 MTR_8g072440 41.429 210 92 5 1 183 57 262 4.77e-40 155
MS.gene61558.t1 MTR_8g024380 35.602 382 216 9 203 559 385 761 1.37e-55 200
MS.gene61558.t1 MTR_8g024380 38.378 185 97 3 14 181 77 261 8.98e-30 124
MS.gene61558.t1 MTR_4g053635 35.580 371 210 9 207 560 318 676 2.66e-55 198
MS.gene61558.t1 MTR_4g053635 45.763 177 74 3 29 183 1 177 3.00e-39 152
MS.gene61558.t1 MTR_8g042710 37.127 369 210 9 207 557 400 764 8.99e-55 198
MS.gene61558.t1 MTR_8g042710 42.857 210 96 4 1 186 49 258 8.60e-45 169
MS.gene61558.t1 MTR_5g011190 37.968 374 182 14 212 556 401 753 1.27e-54 197
MS.gene61558.t1 MTR_5g011190 36.517 178 108 2 12 184 78 255 1.26e-27 118
MS.gene61558.t1 MTR_1g078110 35.340 382 215 10 202 559 383 756 1.89e-53 194
MS.gene61558.t1 MTR_1g078110 38.378 185 97 3 14 181 76 260 3.33e-31 129
MS.gene61558.t1 MTR_5g011340 38.482 369 187 12 212 556 398 750 2.06e-53 194
MS.gene61558.t1 MTR_5g011340 37.705 183 108 3 12 189 75 256 3.84e-28 119
MS.gene61558.t1 MTR_2g049200 34.465 383 217 12 203 560 386 759 2.57e-53 194
MS.gene61558.t1 MTR_2g049200 37.198 207 92 6 14 188 70 270 9.06e-29 121
MS.gene61558.t1 MTR_5g011370 37.433 374 184 14 212 556 421 773 7.13e-53 192
MS.gene61558.t1 MTR_5g011370 36.517 178 108 2 12 184 98 275 2.54e-27 117
MS.gene61558.t1 MTR_5g011270 36.240 367 198 12 212 556 399 751 2.62e-52 191
MS.gene61558.t1 MTR_5g011270 36.702 188 113 2 1 184 71 256 4.59e-29 122
MS.gene61558.t1 MTR_3g104930 34.555 382 217 11 202 556 386 761 3.44e-52 191
MS.gene61558.t1 MTR_3g104930 44.737 190 87 4 12 183 61 250 2.18e-42 162
MS.gene61558.t1 MTR_2g018135 34.259 432 234 15 151 556 375 782 6.22e-52 190
MS.gene61558.t1 MTR_2g018135 41.379 203 85 6 15 183 67 269 1.87e-40 157
MS.gene61558.t1 MTR_5g011310 37.500 368 192 11 212 556 401 753 1.58e-51 189
MS.gene61558.t1 MTR_5g011310 38.418 177 104 2 12 183 78 254 5.05e-28 119
MS.gene61558.t1 MTR_7g079300 38.994 318 175 8 254 556 452 765 4.50e-51 187
MS.gene61558.t1 MTR_7g079300 36.869 198 107 4 3 182 69 266 5.77e-33 134
MS.gene61558.t1 MTR_5g011320 38.275 371 191 12 209 556 390 745 6.55e-51 187
MS.gene61558.t1 MTR_5g011320 35.955 178 109 2 12 184 71 248 4.71e-27 116
MS.gene61558.t1 MTR_7g079310 37.764 331 181 9 246 556 438 763 1.37e-50 186
MS.gene61558.t1 MTR_7g079310 38.947 190 98 4 11 182 74 263 2.16e-33 135
MS.gene61558.t1 MTR_3g114420 36.196 326 177 9 254 559 453 767 1.43e-50 186
MS.gene61558.t1 MTR_3g114420 44.444 189 89 3 12 184 67 255 2.29e-42 162
MS.gene61558.t1 MTR_2g018125 37.333 375 197 14 207 556 422 783 2.70e-50 185
MS.gene61558.t1 MTR_2g018125 42.000 200 82 6 18 183 72 271 1.35e-40 157
MS.gene61558.t1 MTR_7g118080 36.223 323 185 7 254 560 442 759 3.09e-50 185
MS.gene61558.t1 MTR_7g118080 36.316 190 104 3 14 186 76 265 1.42e-28 121
MS.gene61558.t1 MTR_1g079120 35.380 342 200 8 232 556 423 760 1.24e-49 183
MS.gene61558.t1 MTR_1g079120 35.874 223 119 6 7 211 67 283 1.53e-32 133
MS.gene61558.t1 MTR_5g011260 34.555 382 211 13 197 556 387 751 1.52e-49 183
MS.gene61558.t1 MTR_5g011260 36.757 185 115 1 1 183 71 255 2.43e-28 120
MS.gene61558.t1 MTR_8g024390 36.923 325 177 8 252 556 441 757 2.27e-49 182
MS.gene61558.t1 MTR_8g024390 37.500 192 101 3 9 181 65 256 3.45e-29 123
MS.gene61558.t1 MTR_5g011280 37.600 375 183 13 212 556 402 755 2.63e-49 182
MS.gene61558.t1 MTR_5g011280 36.842 190 109 3 12 196 82 265 4.12e-28 119
MS.gene61558.t1 MTR_8g024420 38.710 279 154 5 291 556 447 721 6.74e-48 178
MS.gene61558.t1 MTR_8g024420 36.508 189 101 3 14 183 36 224 1.16e-26 115
MS.gene61558.t1 MTR_3g114410 45.503 189 86 3 12 183 67 255 8.37e-46 170
MS.gene61558.t1 MTR_3g114410 37.719 228 127 7 165 382 358 580 1.05e-27 117
MS.gene61558.t1 MTR_4g126230 38.813 219 131 3 268 485 32 248 3.33e-45 160
MS.gene61558.t1 MTR_8g042710 42.857 210 96 4 1 186 49 258 6.43e-45 169
MS.gene61558.t1 MTR_8g042710 38.579 197 110 4 207 393 400 595 1.89e-26 114
MS.gene61558.t1 MTR_3g464790 34.921 315 179 6 254 556 431 731 6.84e-45 169
MS.gene61558.t1 MTR_3g464790 41.081 185 81 6 12 184 66 234 1.70e-28 120
MS.gene61558.t1 MTR_5g081100 45.000 200 80 5 1 191 25 203 4.23e-42 157
MS.gene61558.t1 MTR_8g024370 36.656 311 174 8 260 556 455 756 1.08e-41 160
MS.gene61558.t1 MTR_8g024370 37.895 190 95 6 14 182 66 253 1.76e-29 124
MS.gene61558.t1 MTR_3g114140 33.580 405 232 13 134 513 27 419 1.36e-40 152
MS.gene61558.t1 MTR_4g127480 32.282 412 210 16 200 557 418 814 5.59e-37 147
MS.gene61558.t1 MTR_4g127480 31.915 188 102 8 18 181 92 277 3.42e-12 69.7
MS.gene61558.t1 MTR_5g081280 39.487 195 81 7 1 186 44 210 7.68e-35 133
MS.gene61558.t1 MTR_8g092940 41.935 186 97 6 6 183 15 197 2.32e-34 130
MS.gene61558.t1 MTR_7g079295 38.071 197 103 4 11 188 76 272 5.32e-34 135
MS.gene61558.t1 MTR_7g079295 38.411 151 86 4 409 556 363 509 4.61e-19 90.9
MS.gene61558.t1 MTR_5g081130 40.223 179 98 5 380 556 1 172 3.01e-33 126
MS.gene61558.t1 MTR_2g037850 30.976 410 212 17 200 554 418 811 1.22e-32 133
MS.gene61558.t1 MTR_2g037850 34.146 205 108 7 1 181 76 277 3.90e-14 75.9
MS.gene61558.t1 MTR_4g053665 33.068 251 131 5 310 560 1 214 3.64e-31 120
MS.gene61558.t1 MTR_4g118440 33.750 240 114 9 309 545 1 198 2.30e-30 119
MS.gene61558.t1 MTR_4g071560 36.574 216 111 7 182 383 317 520 8.06e-28 117
MS.gene61558.t1 MTR_4g071560 37.895 190 90 5 1 183 21 189 4.44e-21 97.4
MS.gene61558.t1 MTR_4g132620 31.154 260 150 8 291 531 542 791 1.75e-27 117
MS.gene61558.t1 MTR_4g132620 30.348 201 119 4 1 181 78 277 1.46e-14 77.4
MS.gene61558.t1 MTR_3g114160 38.636 176 73 5 12 183 4 148 5.68e-27 113
MS.gene61558.t1 MTR_2g046740 31.944 288 163 10 291 556 562 838 1.03e-26 115
MS.gene61558.t1 MTR_2g046740 32.536 209 114 8 1 185 97 302 7.89e-18 87.8
MS.gene61558.t1 MTR_8g089230 30.822 292 168 10 287 556 566 845 1.27e-26 115
MS.gene61558.t1 MTR_8g089230 32.812 192 106 6 18 186 120 311 2.61e-14 76.6
MS.gene61558.t1 MTR_5g044060 41.791 134 69 1 281 405 3 136 2.34e-22 94.7
MS.gene61558.t1 MTR_7g081660 33.889 180 109 6 382 558 382 554 1.21e-21 99.4
MS.gene61558.t1 MTR_3g065240 28.512 242 104 6 208 443 81 259 6.12e-19 87.4
MS.gene61558.t1 MTR_8g027660 29.508 244 125 7 326 559 43 249 7.47e-16 78.2
MS.gene61558.t1 MTR_5g011300 48.315 89 39 1 351 432 1 89 2.12e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61558.t1 AT3G46850 48.942 378 181 6 182 556 366 734 1.02e-107 339
MS.gene61558.t1 AT3G46850 55.102 196 81 2 1 189 56 251 7.32e-64 223
MS.gene61558.t1 AT5G59100 48.077 364 182 4 202 560 380 741 4.49e-107 337
MS.gene61558.t1 AT5G59100 47.191 267 115 5 1 251 57 313 1.84e-68 235
MS.gene61558.t1 AT5G59190 48.068 414 199 7 150 555 282 687 1.70e-105 332
MS.gene61558.t1 AT5G59190 58.152 184 76 1 1 183 18 201 4.41e-65 225
MS.gene61558.t1 AT5G59120 48.209 363 177 7 200 556 370 727 1.72e-104 330
MS.gene61558.t1 AT5G59120 50.000 216 95 3 1 214 54 258 1.39e-63 222
MS.gene61558.t1 AT3G46840 49.153 354 171 5 206 556 387 734 2.78e-104 330
MS.gene61558.t1 AT3G46840 57.592 191 74 2 1 184 57 247 7.93e-64 223
MS.gene61558.t1 AT5G58840 48.171 328 163 4 237 560 386 710 1.64e-98 314
MS.gene61558.t1 AT5G58840 58.289 187 75 2 1 185 58 243 1.68e-67 232
MS.gene61558.t1 AT5G59090 45.810 358 179 7 206 556 379 728 6.18e-98 313
MS.gene61558.t1 AT5G59090 56.757 185 77 2 1 183 55 238 4.97e-63 220
MS.gene61558.t1 AT5G59090 45.810 358 179 7 206 556 377 726 6.63e-98 313
MS.gene61558.t1 AT5G59090 56.757 185 75 3 1 183 55 236 2.01e-61 216
MS.gene61558.t1 AT5G58830 45.125 359 182 5 202 556 358 705 4.76e-97 310
MS.gene61558.t1 AT5G58830 56.757 185 77 2 1 183 56 239 7.65e-67 230
MS.gene61558.t1 AT5G59090 45.378 357 177 7 206 556 379 723 1.12e-95 307
MS.gene61558.t1 AT5G59090 56.757 185 77 2 1 183 55 238 4.18e-63 220
MS.gene61558.t1 AT5G59130 46.369 358 174 8 205 556 341 686 3.65e-92 297
MS.gene61558.t1 AT5G59130 57.527 186 74 3 1 183 19 202 5.77e-65 225
MS.gene61558.t1 AT5G59130 46.629 356 176 7 205 556 376 721 6.38e-92 298
MS.gene61558.t1 AT5G59130 56.452 186 72 4 1 183 58 237 2.44e-61 216
MS.gene61558.t1 AT5G59130 46.629 356 176 7 205 556 380 725 8.50e-92 297
MS.gene61558.t1 AT5G59130 57.527 186 74 3 1 183 58 241 1.16e-64 224
MS.gene61558.t1 AT5G58820 44.193 353 183 7 207 556 359 700 1.09e-90 293
MS.gene61558.t1 AT5G58820 58.730 189 74 3 1 186 52 239 8.62e-67 230
MS.gene61558.t1 AT5G59130 44.972 358 169 9 205 556 380 715 4.49e-87 285
MS.gene61558.t1 AT5G59130 57.527 186 74 3 1 183 58 241 1.11e-64 224
MS.gene61558.t1 AT4G15040 41.176 374 204 6 195 556 316 685 5.25e-75 251
MS.gene61558.t1 AT4G15040 53.097 226 95 2 1 226 19 233 1.04e-69 237
MS.gene61558.t1 AT4G15040 41.176 374 204 6 195 556 316 685 5.25e-75 251
MS.gene61558.t1 AT4G15040 53.097 226 95 2 1 226 19 233 1.04e-69 237
MS.gene61558.t1 AT4G00230 41.854 356 200 6 205 556 391 743 1.67e-74 251
MS.gene61558.t1 AT4G00230 47.059 187 90 2 6 183 65 251 4.84e-45 170
MS.gene61558.t1 AT3G14240 38.718 390 208 8 197 556 381 769 1.85e-70 241
MS.gene61558.t1 AT3G14240 35.743 249 124 5 15 237 62 300 8.32e-35 140
MS.gene61558.t1 AT5G58840 58.289 187 75 2 1 185 58 243 6.65e-69 230
MS.gene61558.t1 AT5G58840 58.289 187 75 2 1 185 58 243 2.26e-68 231
MS.gene61558.t1 AT5G58840 55.405 148 66 0 237 384 386 533 4.81e-47 173
MS.gene61558.t1 AT5G03620 40.519 385 201 10 197 558 381 760 8.85e-68 234
MS.gene61558.t1 AT5G03620 48.454 194 89 3 1 183 58 251 1.35e-45 172
MS.gene61558.t1 AT2G04160 38.422 393 205 15 190 557 391 771 6.70e-65 226
MS.gene61558.t1 AT2G04160 36.800 250 129 7 11 237 71 314 2.95e-37 147
MS.gene61558.t1 AT5G51750 37.701 374 209 10 206 559 408 777 4.29e-64 224
MS.gene61558.t1 AT5G51750 36.546 249 125 6 7 234 73 309 4.86e-37 147
MS.gene61558.t1 AT5G67360 34.660 427 237 12 152 557 350 755 1.62e-62 219
MS.gene61558.t1 AT5G67360 38.397 237 114 5 14 229 64 289 2.68e-39 153
MS.gene61558.t1 AT2G05920 34.426 427 241 11 147 554 341 747 1.88e-61 216
MS.gene61558.t1 AT2G05920 35.685 241 124 8 10 229 55 285 1.06e-32 134
MS.gene61558.t1 AT5G59810 38.339 313 177 6 254 557 470 775 5.11e-60 213
MS.gene61558.t1 AT5G59810 31.801 261 132 7 10 240 80 324 2.59e-32 132
MS.gene61558.t1 AT1G04110 34.346 428 245 12 150 556 358 770 8.63e-60 212
MS.gene61558.t1 AT1G04110 37.436 195 98 3 13 183 69 263 8.71e-29 122
MS.gene61558.t1 AT1G20160 36.609 407 231 10 175 560 326 726 4.75e-59 209
MS.gene61558.t1 AT1G20160 38.362 232 117 4 13 228 26 247 3.50e-41 159
MS.gene61558.t1 AT1G20160 36.609 407 231 10 175 560 365 765 7.02e-59 209
MS.gene61558.t1 AT1G20160 38.362 232 117 4 13 228 65 286 5.95e-41 158
MS.gene61558.t1 AT4G34980 34.704 389 226 10 197 559 375 761 1.24e-58 209
MS.gene61558.t1 AT4G34980 40.816 196 96 3 12 187 55 250 1.74e-37 148
MS.gene61558.t1 AT1G01900 38.624 378 200 10 205 556 400 771 2.59e-58 208
MS.gene61558.t1 AT1G01900 34.667 225 118 5 19 224 83 297 4.11e-29 122
MS.gene61558.t1 AT4G10520 37.186 398 194 14 198 557 366 745 5.46e-57 204
MS.gene61558.t1 AT4G10520 38.942 208 102 4 1 183 52 259 1.47e-37 148
MS.gene61558.t1 AT4G26330 34.054 370 219 7 209 556 355 721 3.33e-56 201
MS.gene61558.t1 AT4G26330 43.284 201 87 6 10 183 16 216 9.49e-38 149
MS.gene61558.t1 AT4G26330 34.054 370 219 7 209 556 369 735 3.59e-56 201
MS.gene61558.t1 AT4G26330 40.465 215 87 7 10 183 16 230 1.67e-34 139
MS.gene61558.t1 AT4G10550 37.912 364 195 8 212 557 361 711 1.43e-54 197
MS.gene61558.t1 AT4G10550 36.290 248 131 5 10 234 11 254 1.05e-39 154
MS.gene61558.t1 AT4G10550 37.912 364 195 8 212 557 361 711 1.43e-54 197
MS.gene61558.t1 AT4G10550 36.290 248 131 5 10 234 11 254 1.05e-39 154
MS.gene61558.t1 AT4G10550 37.600 375 200 9 204 557 406 767 2.91e-54 196
MS.gene61558.t1 AT4G10550 36.290 248 131 5 10 234 67 310 8.91e-40 155
MS.gene61558.t1 AT4G10550 37.912 364 195 8 212 557 433 783 3.59e-54 196
MS.gene61558.t1 AT4G10550 36.290 248 131 5 10 234 83 326 1.05e-39 155
MS.gene61558.t1 AT3G14067 36.148 379 210 11 207 557 394 768 3.90e-53 193
MS.gene61558.t1 AT3G14067 40.526 190 92 3 15 183 69 258 4.10e-33 135
MS.gene61558.t1 AT1G32950 36.436 376 206 8 203 557 348 711 5.98e-53 192
MS.gene61558.t1 AT1G32950 36.546 249 131 6 1 226 1 245 7.65e-33 134
MS.gene61558.t1 AT1G32950 36.436 376 206 8 203 557 399 762 8.33e-53 192
MS.gene61558.t1 AT1G32950 36.546 249 131 6 1 226 52 296 5.59e-33 134
MS.gene61558.t1 AT1G32960 34.987 383 202 10 203 557 403 766 5.14e-52 190
MS.gene61558.t1 AT1G32960 42.132 197 91 4 10 183 65 261 8.34e-41 158
MS.gene61558.t1 AT1G20150 30.857 525 297 18 73 556 271 770 7.01e-52 190
MS.gene61558.t1 AT1G20150 41.146 192 88 4 16 183 66 256 2.12e-40 157
MS.gene61558.t1 AT5G11940 35.635 362 203 8 214 557 404 753 1.60e-51 189
MS.gene61558.t1 AT5G11940 38.075 239 116 5 1 214 60 291 6.44e-41 158
MS.gene61558.t1 AT4G10540 35.696 381 200 10 204 557 402 764 1.03e-50 186
MS.gene61558.t1 AT4G10540 37.500 232 118 5 10 218 63 290 1.22e-40 157
MS.gene61558.t1 AT1G32970 36.000 375 208 10 203 557 361 723 1.63e-50 186
MS.gene61558.t1 AT1G32940 36.387 382 198 10 203 557 349 712 2.82e-50 184
MS.gene61558.t1 AT1G32940 37.549 253 130 6 1 229 1 249 7.25e-42 160
MS.gene61558.t1 AT1G32940 36.387 382 198 10 203 557 349 712 2.82e-50 184
MS.gene61558.t1 AT1G32940 37.549 253 130 6 1 229 1 249 7.25e-42 160
MS.gene61558.t1 AT1G32940 36.387 382 198 10 203 557 400 763 5.42e-50 184
MS.gene61558.t1 AT1G32940 37.549 253 130 6 1 229 52 300 1.03e-41 160
MS.gene61558.t1 AT4G21640 38.111 307 159 9 266 557 438 728 9.88e-50 183
MS.gene61558.t1 AT4G21640 39.726 219 96 5 1 183 64 282 1.85e-40 156
MS.gene61558.t1 AT4G21650 37.954 303 165 7 266 557 471 761 2.02e-49 182
MS.gene61558.t1 AT4G21650 38.314 261 125 8 1 226 64 323 2.10e-41 159
MS.gene61558.t1 AT5G45650 36.126 382 206 11 202 556 418 788 2.12e-49 183
MS.gene61558.t1 AT5G45650 40.826 218 85 8 10 183 60 277 1.30e-37 148
MS.gene61558.t1 AT5G45650 36.126 382 206 11 202 556 418 788 2.12e-49 183
MS.gene61558.t1 AT5G45650 40.826 218 85 8 10 183 60 277 1.30e-37 148
MS.gene61558.t1 AT4G10510 35.733 375 208 9 204 557 333 695 2.31e-49 182
MS.gene61558.t1 AT4G10510 35.983 239 119 7 15 227 1 231 4.62e-36 143
MS.gene61558.t1 AT4G10510 35.733 375 208 9 204 557 348 710 2.46e-49 182
MS.gene61558.t1 AT4G10510 35.802 243 122 7 11 227 12 246 1.82e-36 145
MS.gene61558.t1 AT4G10510 35.733 375 208 9 204 557 392 754 3.48e-49 182
MS.gene61558.t1 AT4G10510 35.802 243 122 7 11 227 56 290 2.41e-36 144
MS.gene61558.t1 AT4G10510 35.733 375 208 9 204 557 404 766 4.35e-49 182
MS.gene61558.t1 AT4G10510 35.802 243 122 7 11 227 68 302 2.06e-36 145
MS.gene61558.t1 AT2G39850 37.705 305 166 9 271 556 466 765 8.20e-49 181
MS.gene61558.t1 AT2G39850 43.523 193 94 4 1 183 50 237 2.51e-39 153
MS.gene61558.t1 AT4G21630 38.762 307 157 10 266 557 464 754 4.56e-48 179
MS.gene61558.t1 AT4G21630 40.553 217 95 5 1 183 62 278 1.54e-40 157
MS.gene61558.t1 AT1G66210 37.135 342 185 10 228 557 428 751 1.60e-47 177
MS.gene61558.t1 AT1G66210 38.136 236 113 5 15 226 78 304 2.08e-37 147
MS.gene61558.t1 AT5G03620 48.454 194 89 3 1 183 58 251 1.21e-46 172
MS.gene61558.t1 AT5G03620 44.949 198 94 5 197 382 381 575 4.94e-33 133
MS.gene61558.t1 AT4G00230 47.059 187 90 2 6 183 65 251 1.69e-45 169
MS.gene61558.t1 AT4G00230 45.000 180 95 3 205 382 391 568 3.51e-36 143
MS.gene61558.t1 AT4G10530 35.013 377 191 15 204 557 391 736 2.36e-45 171
MS.gene61558.t1 AT4G10530 38.942 208 102 4 1 183 52 259 1.03e-37 149
MS.gene61558.t1 AT4G21326 42.391 276 138 5 291 557 425 688 6.55e-45 169
MS.gene61558.t1 AT4G21326 34.440 241 127 7 1 218 1 233 1.92e-33 135
MS.gene61558.t1 AT1G66220 32.353 374 211 9 203 557 395 745 8.99e-43 163
MS.gene61558.t1 AT1G66220 38.428 229 107 4 11 214 71 290 1.33e-39 154
MS.gene61558.t1 AT1G32940 37.549 253 130 6 1 229 52 300 5.62e-42 159
MS.gene61558.t1 AT1G32940 39.394 198 89 7 203 382 400 584 4.75e-19 91.3
MS.gene61558.t1 AT1G20160 36.742 264 129 6 13 248 65 318 3.24e-41 157
MS.gene61558.t1 AT5G67090 33.555 301 175 6 254 545 431 715 6.95e-39 152
MS.gene61558.t1 AT5G67090 30.901 233 133 3 9 223 54 276 1.08e-27 118
MS.gene61558.t1 AT4G21323 38.078 281 150 8 285 554 524 791 2.94e-38 150
MS.gene61558.t1 AT4G21323 37.321 209 105 5 1 183 103 311 3.20e-34 138
MS.gene61558.t1 AT5G45640 30.400 375 224 10 206 556 390 751 4.84e-37 147
MS.gene61558.t1 AT5G45640 38.140 215 90 7 12 183 27 241 2.53e-32 132
MS.gene61558.t1 AT5G59110 39.752 161 93 3 399 556 7 166 5.47e-36 132
MS.gene61558.t1 AT2G19170 31.750 400 212 15 205 555 422 809 1.51e-35 142
MS.gene61558.t1 AT2G19170 31.016 187 105 6 18 181 88 273 2.14e-13 73.6
MS.gene61558.t1 AT2G19170 31.750 400 212 15 205 555 422 809 1.51e-35 142
MS.gene61558.t1 AT2G19170 31.016 187 105 6 18 181 88 273 2.14e-13 73.6
MS.gene61558.t1 AT4G30020 32.000 400 211 14 205 555 423 810 2.16e-35 142
MS.gene61558.t1 AT4G30020 32.804 189 100 6 18 181 88 274 9.27e-12 68.6
MS.gene61558.t1 AT4G30020 32.000 400 211 14 205 555 423 810 2.16e-35 142
MS.gene61558.t1 AT4G30020 32.804 189 100 6 18 181 88 274 9.27e-12 68.6
MS.gene61558.t1 AT4G30020 32.000 400 211 14 205 555 423 810 2.16e-35 142
MS.gene61558.t1 AT4G30020 32.804 189 100 6 18 181 88 274 9.27e-12 68.6
MS.gene61558.t1 AT4G30020 32.000 400 211 14 205 555 423 810 2.16e-35 142
MS.gene61558.t1 AT4G30020 32.804 189 100 6 18 181 88 274 9.27e-12 68.6
MS.gene61558.t1 AT1G32980 39.791 191 101 4 345 526 1 186 9.86e-33 124
MS.gene61558.t1 AT1G30600 30.769 299 156 11 290 556 547 826 2.02e-27 117
MS.gene61558.t1 AT1G30600 34.343 198 106 6 12 185 93 290 4.29e-17 85.5
MS.gene61558.t1 AT1G62340 34.322 236 127 8 291 508 557 782 2.48e-27 117
MS.gene61558.t1 AT4G20430 31.250 256 147 6 289 524 571 817 9.64e-25 109
MS.gene61558.t1 AT4G20430 33.503 197 97 8 18 185 121 312 4.18e-16 82.4
MS.gene61558.t1 AT4G20430 31.250 256 147 6 289 524 571 817 9.64e-25 109
MS.gene61558.t1 AT4G20430 33.503 197 97 8 18 185 121 312 4.18e-16 82.4
MS.gene61558.t1 AT4G20430 31.250 256 147 6 289 524 547 793 1.07e-24 109
MS.gene61558.t1 AT4G20430 33.503 197 97 8 18 185 121 312 3.13e-16 82.8
MS.gene61558.t1 AT5G44530 30.717 293 163 10 289 556 556 833 1.55e-24 108
MS.gene61558.t1 AT5G44530 36.788 193 99 6 16 185 106 298 4.61e-20 94.7
MS.gene61558.t1 AT5G44530 28.616 318 162 11 289 556 556 858 4.99e-21 97.8
MS.gene61558.t1 AT5G44530 36.788 193 99 6 16 185 106 298 4.42e-20 95.1
MS.gene61558.t1 AT5G44530 36.788 193 99 6 16 185 106 298 6.31e-20 94.0

Find 129 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCGGATGCTTTGTAATTA+TGG 0.156176 8.2:-84041822 MS.gene61558:CDS
ACTTGCAACAAGAAGATTAT+TGG 0.198881 8.2:-84043085 MS.gene61558:CDS
TCCGTAAAACTTTCAGATTC+TGG 0.206944 8.2:+84044015 None:intergenic
ATTTCTAGAATCAACGGATT+TGG 0.234912 8.2:+84042188 None:intergenic
TCTATACACTCACACATTTC+AGG 0.237434 8.2:+84042491 None:intergenic
ACTCCTGGGGCACTTATATC+TGG 0.278609 8.2:+84042158 None:intergenic
ATCTTTCACAAAGGATCTAT+TGG 0.284929 8.2:+84041740 None:intergenic
CAACAAAGGGAAAAGCTTAT+TGG 0.290880 8.2:-84044189 MS.gene61558:CDS
ACCACGGCAAAACCGGTTAA+TGG 0.309667 8.2:-84041951 MS.gene61558:CDS
CAAGCTTGCCCAAGAGGATA+TGG 0.319241 8.2:-84042518 MS.gene61558:CDS
CCTTTGTTGGTCATTAAGTA+TGG 0.326699 8.2:+84044203 None:intergenic
CCAGGGTCAACAGCTTGTTT+TGG 0.333424 8.2:+84041876 None:intergenic
TTTCTAGAATCAACGGATTT+GGG 0.333634 8.2:+84042189 None:intergenic
TAATGGTACTTATAATGATT+TGG 0.335166 8.2:-84041934 MS.gene61558:CDS
TCCTCACTTGTTTGGTCAGA+TGG 0.337926 8.2:-84041477 MS.gene61558:CDS
TGTCTTCCTCCTCACTTGTT+TGG 0.345380 8.2:-84041485 MS.gene61558:CDS
TTGGCAGGTGAGTTTGCTTA+TGG 0.346605 8.2:-84041915 MS.gene61558:CDS
ATGGCATGTCCTCACATTGC+TGG 0.348423 8.2:-84042041 MS.gene61558:CDS
GGTGAGTTTGCTTATGGATC+TGG 0.349482 8.2:-84041909 MS.gene61558:CDS
CTTCAAAGATTGATGTATAC+AGG 0.358777 8.2:-84042919 MS.gene61558:CDS
CTCTTCAAAATTTCAGCTAC+AGG 0.370808 8.2:+84042266 None:intergenic
GAGTCATAGATGGCGGAATA+TGG 0.371039 8.2:-84044038 MS.gene61558:CDS
GATAGTCTTTGCACGATGAT+TGG 0.375501 8.2:+84041435 None:intergenic
TATTTGTTGTCAATGTTGTT+GGG 0.386048 8.2:-84041530 MS.gene61558:CDS
CATAGAATCTGGAACCTCTA+TGG 0.386362 8.2:-84042060 MS.gene61558:CDS
GTCAAATACAGCATAGAATC+TGG 0.411448 8.2:-84042071 MS.gene61558:CDS
CATCATGACCACGGCAAAAC+CGG 0.414627 8.2:-84041958 MS.gene61558:CDS
AACAAAATTAAATATATTAG+TGG 0.417871 8.2:-84041789 MS.gene61558:CDS
TTGGGCAAGCTTGAGCATTA+CGG 0.425418 8.2:+84042528 None:intergenic
ATTGAGAGTGGTTTGGTGGT+TGG 0.427042 8.2:-84044060 MS.gene61558:CDS
ATAGTCTTTGCACGATGATT+GGG 0.429881 8.2:+84041436 None:intergenic
TTGGTGGTTGGAGTCATAGA+TGG 0.429912 8.2:-84044048 MS.gene61558:CDS
TCATTATAAGTACCATTAAC+CGG 0.431252 8.2:+84041939 None:intergenic
TGAAATCATTTCATCCAGAT+TGG 0.432307 8.2:-84042004 MS.gene61558:CDS
ATAGATGCTGGCGACCAATC+TGG 0.442455 8.2:+84041990 None:intergenic
TCAATTCATTGAGAGTGGTT+TGG 0.442596 8.2:-84044067 MS.gene61558:CDS
TCAGGTGATCCATATCCTCT+TGG 0.444251 8.2:+84042509 None:intergenic
TTATTTGTTGTCAATGTTGT+TGG 0.448759 8.2:-84041531 MS.gene61558:CDS
GATCAGAGTGCAAGAGACTA+TGG 0.451359 8.2:-84043043 MS.gene61558:CDS
AGTTACAGCAGGAGCTTCAA+TGG 0.455347 8.2:-84044234 MS.gene61558:CDS
ACAAGGTCGTGGGACTTCCT+TGG 0.455572 8.2:-84044114 MS.gene61558:CDS
CATAGAACAGTTACAAATGT+TGG 0.458088 8.2:-84041657 MS.gene61558:CDS
AGTAGCAGTGTAGCTTGAGT+TGG 0.469248 8.2:+84041629 None:intergenic
ATGTTGCAACAAATCATTGA+TGG 0.471722 8.2:-84044285 MS.gene61558:CDS
CAGGTGATCCATATCCTCTT+GGG 0.477258 8.2:+84042510 None:intergenic
TCTAAAGCCTACACTTAACT+TGG 0.477870 8.2:-84042339 MS.gene61558:CDS
TGATTGGGCTGTTCACCCTA+TGG 0.478384 8.2:+84041451 None:intergenic
TGCCCCAGGAGTGGATATCT+TGG 0.479607 8.2:-84042147 MS.gene61558:CDS
TTTGGTCAGATGGCACCCAT+AGG 0.487592 8.2:-84041467 MS.gene61558:CDS
TTTGTATCCAAGTTAAGTGT+AGG 0.489055 8.2:+84042332 None:intergenic
GCTTATGCGAATGGTGCAAT+TGG 0.490912 8.2:-84042410 MS.gene61558:CDS
TTCATAATTTCTAGAATCAA+CGG 0.494033 8.2:+84042182 None:intergenic
TTTGTCATTTATATCATCTG+AGG 0.494361 8.2:+84042100 None:intergenic
GGCAAGTGGAAGAGAGGTGG+AGG 0.499056 8.2:-84042993 MS.gene61558:CDS
CTGTAGGAGCATTGTTGTCA+TGG 0.501407 8.2:+84042234 None:intergenic
GGTACTTATAATGATTTGGC+AGG 0.502252 8.2:-84041930 MS.gene61558:CDS
GTGAGTTTGCTTATGGATCT+GGG 0.502458 8.2:-84041908 MS.gene61558:CDS
GTGATGTCATAAACAAGTCC+AGG 0.505108 8.2:+84041858 None:intergenic
TTGTCATTTATATCATCTGA+GGG 0.508931 8.2:+84042101 None:intergenic
GCGGCCAAGATATCCACTCC+TGG 0.510488 8.2:+84042143 None:intergenic
TCAACAGGAATCACCAGTGC+TGG 0.514654 8.2:+84041708 None:intergenic
AGGGGAGTTTGTGCAGGCGG+TGG 0.516084 8.2:-84043115 MS.gene61558:CDS
CGGCCAAGATATCCACTCCT+GGG 0.516213 8.2:+84042144 None:intergenic
ATTATTGGAGCAAGGTCGTA+CGG 0.518796 8.2:-84043070 MS.gene61558:CDS
GGGAGCAGAATCAAAACAAA+TGG 0.528691 8.2:-84041508 MS.gene61558:CDS
TCACTAAGGAAGATTATGTT+CGG 0.531253 8.2:-84041839 MS.gene61558:CDS
GTAGCAGTGTAGCTTGAGTT+GGG 0.540428 8.2:+84041630 None:intergenic
GCAAGAGACTATGGTGGTCA+TGG 0.540854 8.2:-84043034 MS.gene61558:CDS
AAGTGGAGGGGAGTTTGTGC+AGG 0.547033 8.2:-84043121 MS.gene61558:CDS
TGATATAAATGACAAAAGAC+AGG 0.547527 8.2:-84042093 MS.gene61558:CDS
AGAGATCAATTCATTGAGAG+TGG 0.552553 8.2:-84044072 MS.gene61558:CDS
TTGGTCAGATGGCACCCATA+GGG 0.556488 8.2:-84041466 MS.gene61558:CDS
CCAAAACAAGCTGTTGACCC+TGG 0.557417 8.2:-84041876 MS.gene61558:CDS
GTTGCTTCTTTCTCTTCTCG+TGG 0.558664 8.2:-84042212 MS.gene61558:CDS
ATTTGTTGTCAATGTTGTTG+GGG 0.559020 8.2:-84041529 MS.gene61558:CDS
TACACTTAACTTGGATACAA+AGG 0.559084 8.2:-84042330 MS.gene61558:CDS
TGGAGGGGAGTTTGTGCAGG+CGG 0.559611 8.2:-84043118 MS.gene61558:CDS
AGATATAAGTGCCCCAGGAG+TGG 0.560065 8.2:-84042156 MS.gene61558:CDS
CATACTTAATGACCAACAAA+GGG 0.560148 8.2:-84044202 MS.gene61558:CDS
CACTTGCCGTTGATGCCGTG+TGG 0.560429 8.2:+84043008 None:intergenic
TATACATCAATCTTTGAAGA+CGG 0.560749 8.2:+84042923 None:intergenic
CTTGCAAAAGGCACCGCAAG+AGG 0.569253 8.2:-84042953 MS.gene61558:CDS
TCATCTGAGGGTGGCGCTAG+AGG 0.569258 8.2:+84042113 None:intergenic
ATTCATTGAGAGTGGTTTGG+TGG 0.570930 8.2:-84044064 MS.gene61558:CDS
AGATATAAACTATCCAGCAC+TGG 0.571413 8.2:-84041721 MS.gene61558:CDS
ACTTGCCGTTGATGCCGTGT+GGG 0.571594 8.2:+84043009 None:intergenic
AAACCAGATATAAGTGCCCC+AGG 0.571838 8.2:-84042161 MS.gene61558:CDS
CCATACTTAATGACCAACAA+AGG 0.572184 8.2:-84044203 MS.gene61558:CDS
GATTGGGCTGTTCACCCTAT+GGG 0.576246 8.2:+84041452 None:intergenic
GCTTAGTTCGAAGTTACAGC+AGG 0.576366 8.2:-84044245 MS.gene61558:CDS
CACACGGCATCAACGGCAAG+TGG 0.576776 8.2:-84043007 MS.gene61558:CDS
ACTTGTTTATGACATCACTA+AGG 0.578909 8.2:-84041853 MS.gene61558:CDS
GGAGAAATCTCAAGTTGCCA+TGG 0.579032 8.2:-84041768 MS.gene61558:CDS
AGGATCTATTGGAAGCTCCA+TGG 0.583400 8.2:+84041751 None:intergenic
ATACATCAATCTTTGAAGAC+GGG 0.585559 8.2:+84042924 None:intergenic
AATGCTCAAGCTTGCCCAAG+AGG 0.586375 8.2:-84042524 MS.gene61558:CDS
TCAAAATATAAAGATTAGTG+TGG 0.588980 8.2:-84041595 MS.gene61558:CDS
ATGGCAGATTTGATAGATGC+TGG 0.592187 8.2:+84041978 None:intergenic
AACGGCAAGTGGAAGAGAGG+TGG 0.600282 8.2:-84042996 MS.gene61558:CDS
GAAGAGAAAGAAGCAACTGT+AGG 0.603262 8.2:+84042218 None:intergenic
GAAGTATTGGCTTATGCGAA+TGG 0.604711 8.2:-84042419 MS.gene61558:CDS
GCAAAAGGCACCGCAAGAGG+TGG 0.605589 8.2:-84042950 MS.gene61558:CDS
TGGAACCCACACGGCATCAA+CGG 0.607633 8.2:-84043014 MS.gene61558:CDS
TCTTCAAAATTTCAGCTACA+GGG 0.607809 8.2:+84042267 None:intergenic
ATCAACGGCAAGTGGAAGAG+AGG 0.608127 8.2:-84042999 MS.gene61558:CDS
AGACGGGACACCACCTCTTG+CGG 0.609976 8.2:+84042940 None:intergenic
TACAGGGTATGCGACAAAGA+TGG 0.611728 8.2:-84042902 MS.gene61558:intron
TCATTTATATCATCTGAGGG+TGG 0.619632 8.2:+84042104 None:intergenic
ACAAGAAGATTATTGGAGCA+AGG 0.621653 8.2:-84043078 MS.gene61558:CDS
GAAAAGCTTATTGGCATGAG+AGG 0.630715 8.2:-84044180 MS.gene61558:CDS
ATCTGACCAAACAAGTGAGG+AGG 0.631151 8.2:+84041479 None:intergenic
TTTGTTGTCAATGTTGTTGG+GGG 0.639060 8.2:-84041528 MS.gene61558:CDS
TGATGTCATAAACAAGTCCA+GGG 0.639410 8.2:+84041859 None:intergenic
ATAGTTTATATCTTTCACAA+AGG 0.651025 8.2:+84041731 None:intergenic
GTGGTTGGAGTCATAGATGG+CGG 0.652798 8.2:-84044045 MS.gene61558:CDS
GCTTATTGGCATGAGAGGTG+TGG 0.653083 8.2:-84044175 MS.gene61558:CDS
GCAAGTGGAAGAGAGGTGGA+GGG 0.658577 8.2:-84042992 MS.gene61558:CDS
TTCAAAGATTGATGTATACA+GGG 0.658985 8.2:-84042918 MS.gene61558:CDS
TGGTGGTCATGGAACCCACA+CGG 0.664285 8.2:-84043023 MS.gene61558:CDS
TGATTGATTGAGGAAATCCA+AGG 0.664374 8.2:+84044097 None:intergenic
GCCATCTGACCAAACAAGTG+AGG 0.668116 8.2:+84041476 None:intergenic
GCAGCAACTCCAGCAATGTG+AGG 0.671476 8.2:+84042032 None:intergenic
GTAGGCTTTAGAGAGACCTG+AGG 0.673344 8.2:+84042350 None:intergenic
CAAATCTGCCATCATGACCA+CGG 0.673631 8.2:-84041967 MS.gene61558:CDS
TGGCGCTAGAGGTGAATATG+CGG 0.679161 8.2:+84042124 None:intergenic
AATGTGAGGACATGCCATAG+AGG 0.691673 8.2:+84042046 None:intergenic
GGCCAAGATATCCACTCCTG+GGG 0.698020 8.2:+84042145 None:intergenic
ATTGGAGCAAGGTCGTACGG+CGG 0.701041 8.2:-84043067 MS.gene61558:CDS
CAGAGTGCAAGAGACTATGG+TGG 0.718495 8.2:-84043040 MS.gene61558:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATTAAATATATTAG+TGG - chr8.2:84043927-84043946 MS.gene61558:intron 10.0%
!!! AAAATGTGATTTTATTTTAT+AGG - chr8.2:84042330-84042349 MS.gene61558:CDS 10.0%
!!! AAATGTGATTTTATTTTATA+GGG - chr8.2:84042331-84042350 MS.gene61558:CDS 10.0%
!!! TAATCTTTATATTTTGAATT+GGG + chr8.2:84044118-84044137 None:intergenic 10.0%
!! ACATCTCTATATTTATAAAT+GGG - chr8.2:84042076-84042095 MS.gene61558:CDS 15.0%
!! TAATTAACCCTAATTATTAT+AGG - chr8.2:84042395-84042414 MS.gene61558:CDS 15.0%
!! TCAATATCCTATAATAATTA+GGG + chr8.2:84042405-84042424 None:intergenic 15.0%
!! TTAATAAATCTTCATAAAAG+AGG + chr8.2:84041885-84041904 None:intergenic 15.0%
!!! ACAAAATTTTGAATATTTAC+AGG - chr8.2:84042361-84042380 MS.gene61558:CDS 15.0%
!!! CAAAATTTTGAATATTTACA+GGG - chr8.2:84042362-84042381 MS.gene61558:CDS 15.0%
!!! CTAATCTTTATATTTTGAAT+TGG + chr8.2:84044119-84044138 None:intergenic 15.0%
!!! TAGTTTTTAGATGATAATTT+TGG + chr8.2:84041583-84041602 None:intergenic 15.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr8.2:84042140-84042159 None:intergenic 20.0%
!! ACTGATGGAAAAAATTTATA+GGG - chr8.2:84042268-84042287 MS.gene61558:CDS 20.0%
!! ATAGTTTATATCTTTCACAA+AGG + chr8.2:84043988-84044007 None:intergenic 20.0%
!! ATTAAAACACTCAACATATA+TGG + chr8.2:84042521-84042540 None:intergenic 20.0%
!! ATTAGGGTTAATTAAGTAAA+TGG + chr8.2:84042389-84042408 None:intergenic 20.0%
!! ATTATCATCTAAAAACTACA+AGG - chr8.2:84041585-84041604 MS.gene61558:CDS 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr8.2:84042139-84042158 None:intergenic 20.0%
!! CACATCTCTATATTTATAAA+TGG - chr8.2:84042075-84042094 MS.gene61558:CDS 20.0%
!! CATCTCTATATTTATAAATG+GGG - chr8.2:84042077-84042096 MS.gene61558:CDS 20.0%
!! GTCAATATCCTATAATAATT+AGG + chr8.2:84042406-84042425 None:intergenic 20.0%
!! TAATGGTACTTATAATGATT+TGG - chr8.2:84043782-84043801 MS.gene61558:intron 20.0%
!! TACGATAAAAATGATAAGAT+TGG + chr8.2:84042428-84042447 None:intergenic 20.0%
!! TACTGATGGAAAAAATTTAT+AGG - chr8.2:84042267-84042286 MS.gene61558:CDS 20.0%
!! TCAAAATATAAAGATTAGTG+TGG - chr8.2:84044121-84044140 MS.gene61558:CDS 20.0%
!!! AATCTTATCATTTTTATCGT+AGG - chr8.2:84042427-84042446 MS.gene61558:CDS 20.0%
!!! AATGTGTGATTTTATTTTGT+AGG + chr8.2:84042171-84042190 None:intergenic 20.0%
!!! ATAAATGTTAGTTTTAGTCA+TGG - chr8.2:84041731-84041750 MS.gene61558:CDS 20.0%
!!! ATGTGTGATTTTATTTTGTA+GGG + chr8.2:84042170-84042189 None:intergenic 20.0%
!!! TATATGTTGAGTGTTTTAAT+TGG - chr8.2:84042521-84042540 MS.gene61558:CDS 20.0%
!!! TTCATAATTTCTAGAATCAA+CGG + chr8.2:84043537-84043556 None:intergenic 20.0%
!!! TTTTAGAATGTGTAACATTA+AGG + chr8.2:84043338-84043357 None:intergenic 20.0%
! ATAGACAAAAATATGGTGAA+CGG - chr8.2:84043243-84043262 MS.gene61558:intron 25.0%
! ATAGAGACTAAAAATACTGA+TGG - chr8.2:84042253-84042272 MS.gene61558:CDS 25.0%
! TCATTATAAGTACCATTAAC+CGG + chr8.2:84043780-84043799 None:intergenic 25.0%
! TCTATATTTATAAATGGGGT+TGG - chr8.2:84042081-84042100 MS.gene61558:CDS 25.0%
! TGAGTGTATAGACAAAAATA+TGG - chr8.2:84043236-84043255 MS.gene61558:intron 25.0%
! TGATATAAATGACAAAAGAC+AGG - chr8.2:84043623-84043642 MS.gene61558:intron 25.0%
! TTAGAAATTCTACAGCAATT+TGG + chr8.2:84042924-84042943 None:intergenic 25.0%
! TTCAAAGATTGATGTATACA+GGG - chr8.2:84042798-84042817 MS.gene61558:intron 25.0%
!! AAATTTTTATGAGACTCAAC+AGG + chr8.2:84044026-84044045 None:intergenic 25.0%
!! ATGCAGATGGAAAATTTTAT+AGG - chr8.2:84042300-84042319 MS.gene61558:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+AGG - chr8.2:84042204-84042223 MS.gene61558:CDS 25.0%
!! TATACATCAATCTTTGAAGA+CGG + chr8.2:84042796-84042815 None:intergenic 25.0%
!! TGCAGATGGAAAATTTTATA+GGG - chr8.2:84042301-84042320 MS.gene61558:CDS 25.0%
!! TTGTCATTTATATCATCTGA+GGG + chr8.2:84043618-84043637 None:intergenic 25.0%
!! TTTGTCATTTATATCATCTG+AGG + chr8.2:84043619-84043638 None:intergenic 25.0%
!! TTTTGTCCTTAAAATGCTTA+AGG + chr8.2:84042213-84042232 None:intergenic 25.0%
!!! TATTTGTTGTCAATGTTGTT+GGG - chr8.2:84044186-84044205 MS.gene61558:CDS 25.0%
!!! TTATTTGTTGTCAATGTTGT+TGG - chr8.2:84044185-84044204 MS.gene61558:CDS 25.0%
!!! TTTATTTTCTATGATCGATC+AGG - chr8.2:84042553-84042572 MS.gene61558:intron 25.0%
ACTTGCAACAAGAAGATTAT+TGG - chr8.2:84042631-84042650 MS.gene61558:intron 30.0%
ACTTGTTTATGACATCACTA+AGG - chr8.2:84043863-84043882 MS.gene61558:intron 30.0%
ATAAATATAGAGATGTGTGC+TGG + chr8.2:84042072-84042091 None:intergenic 30.0%
ATCAATGAATTGACGATCTA+CGG + chr8.2:84043082-84043101 None:intergenic 30.0%
ATCTTTCACAAAGGATCTAT+TGG + chr8.2:84043979-84043998 None:intergenic 30.0%
ATGTTGCAACAAATCATTGA+TGG - chr8.2:84041431-84041450 MS.gene61558:CDS 30.0%
ATTAATATTGTCCCCTCAAA+TGG - chr8.2:84043144-84043163 MS.gene61558:CDS 30.0%
CATACTTAATGACCAACAAA+GGG - chr8.2:84041514-84041533 MS.gene61558:CDS 30.0%
CATAGAACAGTTACAAATGT+TGG - chr8.2:84044059-84044078 MS.gene61558:CDS 30.0%
CTTCAAAGATTGATGTATAC+AGG - chr8.2:84042797-84042816 MS.gene61558:intron 30.0%
GACATTATCACAATCTCAAT+TGG - chr8.2:84042895-84042914 MS.gene61558:intron 30.0%
TCACTAAGGAAGATTATGTT+CGG - chr8.2:84043877-84043896 MS.gene61558:intron 30.0%
TCTTCAAAATTTCAGCTACA+GGG + chr8.2:84043452-84043471 None:intergenic 30.0%
TGAAATCATTTCATCCAGAT+TGG - chr8.2:84043712-84043731 MS.gene61558:intron 30.0%
TTAAGGACAAAAAACGTTGA+TGG - chr8.2:84042221-84042240 MS.gene61558:CDS 30.0%
TTCATTGATAAGCTCATTCT+TGG - chr8.2:84043093-84043112 MS.gene61558:CDS 30.0%
TTTGTATCCAAGTTAAGTGT+AGG + chr8.2:84043387-84043406 None:intergenic 30.0%
! AGCTTTTATGATCTTGCAAA+AGG - chr8.2:84042751-84042770 MS.gene61558:intron 30.0%
! ATACATCAATCTTTGAAGAC+GGG + chr8.2:84042795-84042814 None:intergenic 30.0%
! GATCTGAATGAGAGAATTTT+TGG + chr8.2:84044149-84044168 None:intergenic 30.0%
! GGAAATGGAAAGACTTTTAT+TGG - chr8.2:84043114-84043133 MS.gene61558:CDS 30.0%
! TACACTTAACTTGGATACAA+AGG - chr8.2:84043386-84043405 MS.gene61558:intron 30.0%
! TCTGAAAGTTTTACGGATAA+AGG - chr8.2:84041707-84041726 MS.gene61558:CDS 30.0%
!! ATTTCTAGAATCAACGGATT+TGG + chr8.2:84043531-84043550 None:intergenic 30.0%
!! ATTTGTTGTCAATGTTGTTG+GGG - chr8.2:84044187-84044206 MS.gene61558:CDS 30.0%
!! TGATCTCTTTTGATTGATTG+AGG + chr8.2:84041632-84041651 None:intergenic 30.0%
!! TTTCTAGAATCAACGGATTT+GGG + chr8.2:84043530-84043549 None:intergenic 30.0%
ACAAGAAGATTATTGGAGCA+AGG - chr8.2:84042638-84042657 MS.gene61558:intron 35.0%
AGAGATCAATTCATTGAGAG+TGG - chr8.2:84041644-84041663 MS.gene61558:CDS 35.0%
AGATATAAACTATCCAGCAC+TGG - chr8.2:84043995-84044014 MS.gene61558:intron 35.0%
AGGGACTAAAAAAATGCAGA+TGG - chr8.2:84042287-84042306 MS.gene61558:CDS 35.0%
ATAGTCTTTGCACGATGATT+GGG + chr8.2:84044283-84044302 None:intergenic 35.0%
ATCTAAAAACTACAAGGTCG+TGG - chr8.2:84041591-84041610 MS.gene61558:CDS 35.0%
ATGCTTAAGGAAAATGACAC+AGG + chr8.2:84042200-84042219 None:intergenic 35.0%
CAACAAAGGGAAAAGCTTAT+TGG - chr8.2:84041527-84041546 MS.gene61558:CDS 35.0%
CATGGAAAAGGAAATACTCA+CGG - chr8.2:84042975-84042994 MS.gene61558:CDS 35.0%
CCATACTTAATGACCAACAA+AGG - chr8.2:84041513-84041532 MS.gene61558:CDS 35.0%
CCTTTGTTGGTCATTAAGTA+TGG + chr8.2:84041516-84041535 None:intergenic 35.0%
CTAAAAGATCCTATTGCCAT+TGG - chr8.2:84042940-84042959 MS.gene61558:CDS 35.0%
CTAGAAACACTACTTGGTTT+AGG + chr8.2:84043024-84043043 None:intergenic 35.0%
CTCTTCAAAATTTCAGCTAC+AGG + chr8.2:84043453-84043472 None:intergenic 35.0%
GATAAGCTCATTCTTGGAAA+TGG - chr8.2:84043099-84043118 MS.gene61558:CDS 35.0%
GCAGCAATACTAAATAACCA+AGG + chr8.2:84043054-84043073 None:intergenic 35.0%
GTCAAATACAGCATAGAATC+TGG - chr8.2:84043645-84043664 MS.gene61558:intron 35.0%
GTTCGGATGCTTTGTAATTA+TGG - chr8.2:84043894-84043913 MS.gene61558:intron 35.0%
TCAATTCATTGAGAGTGGTT+TGG - chr8.2:84041649-84041668 MS.gene61558:CDS 35.0%
TCATTTATATCATCTGAGGG+TGG + chr8.2:84043615-84043634 None:intergenic 35.0%
TCCGTAAAACTTTCAGATTC+TGG + chr8.2:84041704-84041723 None:intergenic 35.0%
TCTAAAAACTACAAGGTCGT+GGG - chr8.2:84041592-84041611 MS.gene61558:CDS 35.0%
TCTATACACTCACACATTTC+AGG + chr8.2:84043228-84043247 None:intergenic 35.0%
TGAAAAGAACCAATGGCAAT+AGG + chr8.2:84042952-84042971 None:intergenic 35.0%
TGATGTCATAAACAAGTCCA+GGG + chr8.2:84043860-84043879 None:intergenic 35.0%
TGATTGATTGAGGAAATCCA+AGG + chr8.2:84041622-84041641 None:intergenic 35.0%
TGCTTAAGGAAAATGACACA+GGG + chr8.2:84042199-84042218 None:intergenic 35.0%
! CAATAAGCTTTTCCCTTTGT+TGG + chr8.2:84041529-84041548 None:intergenic 35.0%
! GCCAGAATCTGAAAGTTTTA+CGG - chr8.2:84041700-84041719 MS.gene61558:CDS 35.0%
! GGTACTTATAATGATTTGGC+AGG - chr8.2:84043786-84043805 MS.gene61558:intron 35.0%
! TCTAAAGCCTACACTTAACT+TGG - chr8.2:84043377-84043396 MS.gene61558:intron 35.0%
! TTCTAAAAATGATGCTCCTC+AGG - chr8.2:84043350-84043369 MS.gene61558:intron 35.0%
! TTCTTTTCATGCCATGGAAA+AGG - chr8.2:84042963-84042982 MS.gene61558:CDS 35.0%
! TTTGTTGTCAATGTTGTTGG+GGG - chr8.2:84044188-84044207 MS.gene61558:CDS 35.0%
!! GGGGTTGGTCATAATTATTA+GGG - chr8.2:84042096-84042115 MS.gene61558:CDS 35.0%
!! TGGGGTTGGTCATAATTATT+AGG - chr8.2:84042095-84042114 MS.gene61558:CDS 35.0%
AATGTCAACTCCATCAGCAA+TGG + chr8.2:84042881-84042900 None:intergenic 40.0%
AGATGGTAACTGCAATGGAA+AGG - chr8.2:84042831-84042850 MS.gene61558:intron 40.0%
ATGGCAGATTTGATAGATGC+TGG + chr8.2:84043741-84043760 None:intergenic 40.0%
ATGTGTGATAAGGAGGTCAA+TGG + chr8.2:84042023-84042042 None:intergenic 40.0%
ATTATTGGAGCAAGGTCGTA+CGG - chr8.2:84042646-84042665 MS.gene61558:intron 40.0%
CATGGCATGAAAAGAACCAA+TGG + chr8.2:84042959-84042978 None:intergenic 40.0%
GAAAAGCTTATTGGCATGAG+AGG - chr8.2:84041536-84041555 MS.gene61558:CDS 40.0%
GAAGAGAAAGAAGCAACTGT+AGG + chr8.2:84043501-84043520 None:intergenic 40.0%
GACAAAGATGGTAACTGCAA+TGG - chr8.2:84042826-84042845 MS.gene61558:intron 40.0%
GATAGTCTTTGCACGATGAT+TGG + chr8.2:84044284-84044303 None:intergenic 40.0%
GGGAGCAGAATCAAAACAAA+TGG - chr8.2:84044208-84044227 MS.gene61558:CDS 40.0%
GTGATGTCATAAACAAGTCC+AGG + chr8.2:84043861-84043880 None:intergenic 40.0%
! ATTCATTGAGAGTGGTTTGG+TGG - chr8.2:84041652-84041671 MS.gene61558:CDS 40.0%
! CATAGAATCTGGAACCTCTA+TGG - chr8.2:84043656-84043675 MS.gene61558:intron 40.0%
! CGTGAGTATTTCCTTTTCCA+TGG + chr8.2:84042977-84042996 None:intergenic 40.0%
! GTGAGTTTGCTTATGGATCT+GGG - chr8.2:84043808-84043827 MS.gene61558:intron 40.0%
!! GAAGTATTGGCTTATGCGAA+TGG - chr8.2:84043297-84043316 MS.gene61558:intron 40.0%
!! TTCAGCTACAGGGTATTTTG+TGG + chr8.2:84043442-84043461 None:intergenic 40.0%
!! TTGTTTTGTGTGGAACACCA+GGG - chr8.2:84043271-84043290 MS.gene61558:intron 40.0%
!! TTTGATGATGCCATTGCTGA+TGG - chr8.2:84042868-84042887 MS.gene61558:intron 40.0%
!!! AACGGTAAGCTTGTTTTGTG+TGG - chr8.2:84043261-84043280 MS.gene61558:intron 40.0%
!!! CATTGGTTCTTTTCATGCCA+TGG - chr8.2:84042957-84042976 MS.gene61558:CDS 40.0%
!!! GGAATTTTGTGCCATTTGAG+GGG + chr8.2:84043158-84043177 None:intergenic 40.0%
!!! GGGAATTTTGTGCCATTTGA+GGG + chr8.2:84043159-84043178 None:intergenic 40.0%
!!! TGGGAATTTTGTGCCATTTG+AGG + chr8.2:84043160-84043179 None:intergenic 40.0%
AAACCAGATATAAGTGCCCC+AGG - chr8.2:84043555-84043574 MS.gene61558:intron 45.0%
AAAGGAAATACTCACGGTGC+AGG - chr8.2:84042981-84043000 MS.gene61558:CDS 45.0%
AATGTGAGGACATGCCATAG+AGG + chr8.2:84043673-84043692 None:intergenic 45.0%
AGAGGTGGAGATGTGTGATA+AGG + chr8.2:84042033-84042052 None:intergenic 45.0%
AGGATCTATTGGAAGCTCCA+TGG + chr8.2:84043968-84043987 None:intergenic 45.0%
AGTAGCAGTGTAGCTTGAGT+TGG + chr8.2:84044090-84044109 None:intergenic 45.0%
AGTTACAGCAGGAGCTTCAA+TGG - chr8.2:84041482-84041501 MS.gene61558:CDS 45.0%
ATCTGACCAAACAAGTGAGG+AGG + chr8.2:84044240-84044259 None:intergenic 45.0%
CAAATCTGCCATCATGACCA+CGG - chr8.2:84043749-84043768 MS.gene61558:intron 45.0%
CAGGTGATCCATATCCTCTT+GGG + chr8.2:84043209-84043228 None:intergenic 45.0%
GAGCATTACGGACAGCTATT+GGG + chr8.2:84043179-84043198 None:intergenic 45.0%
GATCAGAGTGCAAGAGACTA+TGG - chr8.2:84042673-84042692 MS.gene61558:intron 45.0%
GCTACGCTAGAAACACTACT+TGG + chr8.2:84043030-84043049 None:intergenic 45.0%
GCTTAGTTCGAAGTTACAGC+AGG - chr8.2:84041471-84041490 MS.gene61558:CDS 45.0%
GCTTATGCGAATGGTGCAAT+TGG - chr8.2:84043306-84043325 MS.gene61558:intron 45.0%
GTAGCAGTGTAGCTTGAGTT+GGG + chr8.2:84044089-84044108 None:intergenic 45.0%
GTTGCTTCTTTCTCTTCTCG+TGG - chr8.2:84043504-84043523 MS.gene61558:intron 45.0%
TACAGGGTATGCGACAAAGA+TGG - chr8.2:84042814-84042833 MS.gene61558:intron 45.0%
TCAGGTGATCCATATCCTCT+TGG + chr8.2:84043210-84043229 None:intergenic 45.0%
TCCCATTCCGAAAAAGTGGA+GGG - chr8.2:84042582-84042601 MS.gene61558:intron 45.0%
TCCTCACTTGTTTGGTCAGA+TGG - chr8.2:84044239-84044258 MS.gene61558:CDS 45.0%
TGAGCATTACGGACAGCTAT+TGG + chr8.2:84043180-84043199 None:intergenic 45.0%
TGTCTTCCTCCTCACTTGTT+TGG - chr8.2:84044231-84044250 MS.gene61558:CDS 45.0%
TTCTATGATCGATCAGGCCT+TGG - chr8.2:84042559-84042578 MS.gene61558:intron 45.0%
TTGGGCAAGCTTGAGCATTA+CGG + chr8.2:84043191-84043210 None:intergenic 45.0%
TTGGTCCCATTCCGAAAAAG+TGG - chr8.2:84042578-84042597 MS.gene61558:intron 45.0%
! GGAGAAATCTCAAGTTGCCA+TGG - chr8.2:84043948-84043967 MS.gene61558:intron 45.0%
! GGTGAGTTTGCTTATGGATC+TGG - chr8.2:84043807-84043826 MS.gene61558:intron 45.0%
! TGTTTTGTGTGGAACACCAG+GGG - chr8.2:84043272-84043291 MS.gene61558:intron 45.0%
! TTGGCAGGTGAGTTTGCTTA+TGG - chr8.2:84043801-84043820 MS.gene61558:intron 45.0%
! TTGGTGGTTGGAGTCATAGA+TGG - chr8.2:84041668-84041687 MS.gene61558:CDS 45.0%
!! AGAGATGTGTGCTGGTTTGA+TGG + chr8.2:84042064-84042083 None:intergenic 45.0%
!! ATTGAGAGTGGTTTGGTGGT+TGG - chr8.2:84041656-84041675 MS.gene61558:CDS 45.0%
!! CTGTAGGAGCATTGTTGTCA+TGG + chr8.2:84043485-84043504 None:intergenic 45.0%
!! GAGTCATAGATGGCGGAATA+TGG - chr8.2:84041678-84041697 MS.gene61558:CDS 45.0%
!!! ACTTTTTCGGAATGGGACCA+AGG + chr8.2:84042579-84042598 None:intergenic 45.0%
!!! CAAACTCCCCTCCACTTTTT+CGG + chr8.2:84042592-84042611 None:intergenic 45.0%
!!! CTTGTTTTGTGTGGAACACC+AGG - chr8.2:84043270-84043289 MS.gene61558:intron 45.0%
AACACCAGGGGGTGAAGTAT+TGG - chr8.2:84043284-84043303 MS.gene61558:intron 50.0%
AATGCTCAAGCTTGCCCAAG+AGG - chr8.2:84043192-84043211 MS.gene61558:intron 50.0%
ACCACGGCAAAACCGGTTAA+TGG - chr8.2:84043765-84043784 MS.gene61558:intron 50.0%
AGATATAAGTGCCCCAGGAG+TGG - chr8.2:84043560-84043579 MS.gene61558:intron 50.0%
ATAGATGCTGGCGACCAATC+TGG + chr8.2:84043729-84043748 None:intergenic 50.0%
ATCAACGGCAAGTGGAAGAG+AGG - chr8.2:84042717-84042736 MS.gene61558:intron 50.0%
ATGGCATGTCCTCACATTGC+TGG - chr8.2:84043675-84043694 MS.gene61558:intron 50.0%
CAAGCTTGCCCAAGAGGATA+TGG - chr8.2:84043198-84043217 MS.gene61558:intron 50.0%
CAGAGTGCAAGAGACTATGG+TGG - chr8.2:84042676-84042695 MS.gene61558:intron 50.0%
CATCATGACCACGGCAAAAC+CGG - chr8.2:84043758-84043777 MS.gene61558:intron 50.0%
CCAAAACAAGCTGTTGACCC+TGG - chr8.2:84043840-84043859 MS.gene61558:intron 50.0%
CCCATTCCGAAAAAGTGGAG+GGG - chr8.2:84042583-84042602 MS.gene61558:intron 50.0%
GATTGGGCTGTTCACCCTAT+GGG + chr8.2:84044267-84044286 None:intergenic 50.0%
GCAAGAGACTATGGTGGTCA+TGG - chr8.2:84042682-84042701 MS.gene61558:intron 50.0%
GCCATCTGACCAAACAAGTG+AGG + chr8.2:84044243-84044262 None:intergenic 50.0%
GCTTATTGGCATGAGAGGTG+TGG - chr8.2:84041541-84041560 MS.gene61558:CDS 50.0%
GGTGGAGATGTGTGATAAGG+AGG + chr8.2:84042030-84042049 None:intergenic 50.0%
GTCCCATTCCGAAAAAGTGG+AGG - chr8.2:84042581-84042600 MS.gene61558:intron 50.0%
GTGGTTGGAGTCATAGATGG+CGG - chr8.2:84041671-84041690 MS.gene61558:CDS 50.0%
TAAGCCAATACTTCACCCCC+TGG + chr8.2:84043291-84043310 None:intergenic 50.0%
TCAACAGGAATCACCAGTGC+TGG + chr8.2:84044011-84044030 None:intergenic 50.0%
TGATTGGGCTGTTCACCCTA+TGG + chr8.2:84044268-84044287 None:intergenic 50.0%
TGGCGCTAGAGGTGAATATG+CGG + chr8.2:84043595-84043614 None:intergenic 50.0%
TTGGTCAGATGGCACCCATA+GGG - chr8.2:84044250-84044269 MS.gene61558:CDS 50.0%
TTTGGTCAGATGGCACCCAT+AGG - chr8.2:84044249-84044268 MS.gene61558:CDS 50.0%
! ACTCCTGGGGCACTTATATC+TGG + chr8.2:84043561-84043580 None:intergenic 50.0%
! GGTTTGATGGTTGAGGTGAG+AGG + chr8.2:84042051-84042070 None:intergenic 50.0%
! GTTTTGTGTGGAACACCAGG+GGG - chr8.2:84043273-84043292 MS.gene61558:intron 50.0%
! TTGATGGTTGAGGTGAGAGG+TGG + chr8.2:84042048-84042067 None:intergenic 50.0%
! TTTAGGACCGCTGTTTCCTG+CGG + chr8.2:84043007-84043026 None:intergenic 50.0%
!! ACCATTAACCGGTTTTGCCG+TGG + chr8.2:84043769-84043788 None:intergenic 50.0%
!! CCAGGGTCAACAGCTTGTTT+TGG + chr8.2:84043843-84043862 None:intergenic 50.0%
!! GTAGGCTTTAGAGAGACCTG+AGG + chr8.2:84043369-84043388 None:intergenic 50.0%
!! GTGTGCTGGTTTGATGGTTG+AGG + chr8.2:84042058-84042077 None:intergenic 50.0%
!! GTGTTTCTAGCGTAGCACCT+TGG - chr8.2:84043034-84043053 MS.gene61558:CDS 50.0%
!!! CCCCTCCACTTTTTCGGAAT+GGG + chr8.2:84042586-84042605 None:intergenic 50.0%
!!! TCCCCTCCACTTTTTCGGAA+TGG + chr8.2:84042587-84042606 None:intergenic 50.0%
AACGGCAAGTGGAAGAGAGG+TGG - chr8.2:84042720-84042739 MS.gene61558:intron 55.0%
AAGTGGAGGGGAGTTTGTGC+AGG - chr8.2:84042595-84042614 MS.gene61558:intron 55.0%
ACAAGGTCGTGGGACTTCCT+TGG - chr8.2:84041602-84041621 MS.gene61558:CDS 55.0%
ACTTGCCGTTGATGCCGTGT+GGG + chr8.2:84042710-84042729 None:intergenic 55.0%
ATTGGAGCAAGGTCGTACGG+CGG - chr8.2:84042649-84042668 MS.gene61558:intron 55.0%
CGGCCAAGATATCCACTCCT+GGG + chr8.2:84043575-84043594 None:intergenic 55.0%
GCAAGTGGAAGAGAGGTGGA+GGG - chr8.2:84042724-84042743 MS.gene61558:intron 55.0%
GCAGCAACTCCAGCAATGTG+AGG + chr8.2:84043687-84043706 None:intergenic 55.0%
GGCCAAGATATCCACTCCTG+GGG + chr8.2:84043574-84043593 None:intergenic 55.0%
TGCCCCAGGAGTGGATATCT+TGG - chr8.2:84043569-84043588 MS.gene61558:intron 55.0%
TGGAACCCACACGGCATCAA+CGG - chr8.2:84042702-84042721 MS.gene61558:intron 55.0%
TGGTGGTCATGGAACCCACA+CGG - chr8.2:84042693-84042712 MS.gene61558:intron 55.0%
! CGGTTTTGCCGTGGTCATGA+TGG + chr8.2:84043760-84043779 None:intergenic 55.0%
!! CTTGCAAAAGGCACCGCAAG+AGG - chr8.2:84042763-84042782 MS.gene61558:intron 55.0%
AGACGGGACACCACCTCTTG+CGG + chr8.2:84042779-84042798 None:intergenic 60.0%
CACACGGCATCAACGGCAAG+TGG - chr8.2:84042709-84042728 MS.gene61558:intron 60.0%
CACTTGCCGTTGATGCCGTG+TGG + chr8.2:84042711-84042730 None:intergenic 60.0%
GCGGCCAAGATATCCACTCC+TGG + chr8.2:84043576-84043595 None:intergenic 60.0%
GGCAAGTGGAAGAGAGGTGG+AGG - chr8.2:84042723-84042742 MS.gene61558:intron 60.0%
TCATCTGAGGGTGGCGCTAG+AGG + chr8.2:84043606-84043625 None:intergenic 60.0%
TGGAGGGGAGTTTGTGCAGG+CGG - chr8.2:84042598-84042617 MS.gene61558:intron 60.0%
!! GCAAAAGGCACCGCAAGAGG+TGG - chr8.2:84042766-84042785 MS.gene61558:intron 60.0%
AGGGGAGTTTGTGCAGGCGG+TGG - chr8.2:84042601-84042620 MS.gene61558:intron 65.0%
ATACTCACGGTGCAGGCCGC+AGG - chr8.2:84042988-84043007 MS.gene61558:CDS 65.0%
GTGCAGGCCGCAGGAAACAG+CGG - chr8.2:84042997-84043016 MS.gene61558:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 84041431 84044307 84041431 ID=MS.gene61558
chr8.2 mRNA 84041431 84044307 84041431 ID=MS.gene61558.t1;Parent=MS.gene61558
chr8.2 exon 84044010 84044307 84044010 ID=MS.gene61558.t1.exon1;Parent=MS.gene61558.t1
chr8.2 CDS 84044010 84044307 84044010 ID=cds.MS.gene61558.t1;Parent=MS.gene61558.t1
chr8.2 exon 84042903 84043163 84042903 ID=MS.gene61558.t1.exon2;Parent=MS.gene61558.t1
chr8.2 CDS 84042903 84043163 84042903 ID=cds.MS.gene61558.t1;Parent=MS.gene61558.t1
chr8.2 exon 84041431 84042554 84041431 ID=MS.gene61558.t1.exon3;Parent=MS.gene61558.t1
chr8.2 CDS 84041431 84042554 84041431 ID=cds.MS.gene61558.t1;Parent=MS.gene61558.t1
Gene Sequence

>MS.gene61558

ATGTTGCAACAAATCATTGATGGTAGCAACGCAGAAAATCGCTTAGTTCGAAGTTACAGCAGGAGCTTCAATGGTTTTGCTGCCATACTTAATGACCAACAAAGGGAAAAGCTTATTGGCATGAGAGGTGTGGTCTCAGTTTTTCAATGCCAAAATTATCATCTAAAAACTACAAGGTCGTGGGACTTCCTTGGATTTCCTCAATCAATCAAAAGAGATCAATTCATTGAGAGTGGTTTGGTGGTTGGAGTCATAGATGGCGGAATATGGCCAGAATCTGAAAGTTTTACGGATAAAGGTATAAATGTTAGTTTTAGTCATGGTCATGATATCTTAGTGTAATCATCGTACTTTTTTTTAATCGTCATATGTACGAAATATTCATCTCATAAAATGATACATGTTCAATTAATTAGAACAATTTCTTATTATTATTAAATCTAACTAATTTCCTCTTTTATGAAGATTTATTAATAAATGATATTTCTTAAAAGACAAACTTTAGTTGTTTTCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATCGAATATCAAACCATTGACCTCCTTATCACACATCTCCACCTCTCACCTCAACCATCAAACCAGCACACATCTCTATATTTATAAATGGGGTTGGTCATAATTATTAGGGTTAATTAAGTTTTTAATCCCTATAAATATTCACAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACATTTTAGTCCCTGTGTCATTTTCCTTAAGCATTTTAAGGACAAAAAACGTTGATGGAAATTTTTGATAGAGACTAAAAATACTGATGGAAAAAATTTATAGGGACTAAAAAAATGCAGATGGAAAATTTTATAGGGACTAAAAAAATGTGATTTTATTTTATAGGGACTAAAAACAAAATTTTGAATATTTACAGGGACCATTTACTTAATTAACCCTAATTATTATAGGATATTGACCAATCTTATCATTTTTATCGTAGGAACAAAAGACAATATGATTTTTTTTTTTACAAAAGAAAAGACAATATGATTAGAAAGATTGACGATATCCATATATGTTGAGTGTTTTAATTGGTTAAAGAGATTTATTTTCTATGATCGATCAGGCCTTGGTCCCATTCCGAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAATTTCACTTGCAACAAGAAGATTATTGGAGCAAGGTCGTACGGCGGTGATCAGAGTGCAAGAGACTATGGTGGTCATGGAACCCACACGGCATCAACGGCAAGTGGAAGAGAGGTGGAGGGAGTGAGCTTTTATGATCTTGCAAAAGGCACCGCAAGAGGTGGTGTCCCGTCTTCAAAGATTGATGTATACAGGGTATGCGACAAAGATGGTAACTGCAATGGAAAGGATATTTTAGCTGCATTTGATGATGCCATTGCTGATGGAGTTGACATTATCACAATCTCAATTGGAAGCCAAATTGCTGTAGAATTTCTAAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAAAAGGAAATACTCACGGTGCAGGCCGCAGGAAACAGCGGTCCTAAACCAAGTAGTGTTTCTAGCGTAGCACCTTGGTTATTTAGTATTGCTGCAACTACCGTAGATCGTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAAGACTTTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTCCCAATAGCTGTCCGTAATGCTCAAGCTTGCCCAAGAGGATATGGATCACCTGAAATGTGTGAGTGTATAGACAAAAATATGGTGAACGGTAAGCTTGTTTTGTGTGGAACACCAGGGGGTGAAGTATTGGCTTATGCGAATGGTGCAATTGGTTCAATCCTTAATGTTACACATTCTAAAAATGATGCTCCTCAGGTCTCTCTAAAGCCTACACTTAACTTGGATACAAAGGACTATGTTCTAGTTCAATCTTACTCAAATTCCACAAAATACCCTGTAGCTGAAATTTTGAAGAGTGAAATCTTCCATGACAACAATGCTCCTACAGTTGCTTCTTTCTCTTCTCGTGGCCCAAATCCGTTGATTCTAGAAATTATGAAACCAGATATAAGTGCCCCAGGAGTGGATATCTTGGCCGCATATTCACCTCTAGCGCCACCCTCAGATGATATAAATGACAAAAGACAGGTCAAATACAGCATAGAATCTGGAACCTCTATGGCATGTCCTCACATTGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAGATTGGTCGCCAGCATCTATCAAATCTGCCATCATGACCACGGCAAAACCGGTTAATGGTACTTATAATGATTTGGCAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCAAAACAAGCTGTTGACCCTGGACTTGTTTATGACATCACTAAGGAAGATTATGTTCGGATGCTTTGTAATTATGGTTATGATACTAACAAAATTAAATATATTAGTGGAGAAATCTCAAGTTGCCATGGAGCTTCCAATAGATCCTTTGTGAAAGATATAAACTATCCAGCACTGGTGATTCCTGTTGAGTCTCATAAAAATTTCAATGTCAAGATTCATAGAACAGTTACAAATGTTGGCTCTCCCAACTCAAGCTACACTGCTACTGTCATCCCAATTCAAAATATAAAGATTAGTGTGGAGCCAAAAATTCTCTCATTCAGATCATTGAATGAGAAACAATTATTTGTTGTCAATGTTGTTGGGGGAGCAGAATCAAAACAAATGGTGTCTTCCTCCTCACTTGTTTGGTCAGATGGCACCCATAGGGTGAACAGCCCAATCATCGTGCAAAGACTATCCTAA

Protein sequence

>MS.gene61558.t1

MLQQIIDGSNAENRLVRSYSRSFNGFAAILNDQQREKLIGMRGVVSVFQCQNYHLKTTRSWDFLGFPQSIKRDQFIESGLVVGVIDGGIWPESESFTDKGLGPIPKKWRGVCAGGGNFTCNKKIIGARSYGGDQSARDYGGHGTHTASTASGREVEGVSFYDLAKGTARGGVPSSKIDVYRVCDKDAVRNAQACPRGYGSPEMCECIDKNMVNGKLVLCGTPGGEVLAYANGAIGSILNVTHSKNDAPQVSLKPTLNLDTKDYVLVQSYSNSTKYPVAEILKSEIFHDNNAPTVASFSSRGPNPLILEIMKPDISAPGVDILAAYSPLAPPSDDINDKRQVKYSIESGTSMACPHIAGVAAYVKSFHPDWSPASIKSAIMTTAKPVNGTYNDLAGEFAYGSGNVNPKQAVDPGLVYDITKEDYVRMLCNYGYDTNKIKYISGEISSCHGASNRSFVKDINYPALVIPVESHKNFNVKIHRTVTNVGSPNSSYTATVIPIQNIKISVEPKILSFRSLNEKQLFVVNVVGGAESKQMVSSSSLVWSDGTHRVNSPIIVQRLS