Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63163.t1 | XP_024635331.1 | 91.6 | 416 | 7 | 2 | 1 | 388 | 1 | 416 | 2.30E-199 | 705.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63163.t1 | Q9LP45 | 79.7 | 409 | 54 | 3 | 8 | 388 | 6 | 413 | 7.0e-173 | 608.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63163.t1 | G7J2W0 | 91.6 | 416 | 7 | 2 | 1 | 388 | 250 | 665 | 1.6e-199 | 705.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene63163.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63163.t1 | MTR_3g109300 | 91.587 | 416 | 7 | 2 | 1 | 388 | 250 | 665 | 0.0 | 755 |
| MS.gene63163.t1 | MTR_1g009010 | 85.266 | 414 | 33 | 2 | 3 | 388 | 2 | 415 | 0.0 | 681 |
| MS.gene63163.t1 | MTR_3g109310 | 88.824 | 170 | 15 | 1 | 388 | 557 | 130 | 295 | 3.50e-102 | 310 |
| MS.gene63163.t1 | MTR_3g110010 | 77.444 | 133 | 30 | 0 | 381 | 513 | 626 | 758 | 1.05e-53 | 194 |
| MS.gene63163.t1 | MTR_3g109982 | 59.896 | 192 | 61 | 4 | 338 | 513 | 583 | 774 | 3.45e-53 | 193 |
| MS.gene63163.t1 | MTR_1g008990 | 56.410 | 156 | 61 | 5 | 403 | 557 | 190 | 339 | 2.76e-43 | 157 |
| MS.gene63163.t1 | MTR_1g008990 | 72.222 | 54 | 15 | 0 | 403 | 456 | 190 | 243 | 3.57e-17 | 82.0 |
| MS.gene63163.t1 | MTR_7g087530 | 22.872 | 376 | 244 | 9 | 14 | 351 | 33 | 400 | 5.36e-15 | 77.8 |
| MS.gene63163.t1 | MTR_1g080920 | 47.312 | 93 | 45 | 2 | 402 | 494 | 228 | 316 | 5.78e-15 | 77.4 |
| MS.gene63163.t1 | MTR_7g115120 | 52.857 | 70 | 31 | 1 | 402 | 471 | 213 | 280 | 1.65e-13 | 72.8 |
| MS.gene63163.t1 | MTR_7g115140 | 47.826 | 69 | 36 | 0 | 388 | 456 | 138 | 206 | 3.70e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63163.t1 | AT1G29150 | 79.707 | 409 | 54 | 3 | 8 | 388 | 6 | 413 | 0.0 | 622 |
| MS.gene63163.t1 | AT1G29150 | 79.707 | 409 | 54 | 3 | 8 | 388 | 6 | 413 | 0.0 | 622 |
| MS.gene63163.t1 | AT5G24800 | 45.665 | 173 | 73 | 7 | 387 | 557 | 124 | 277 | 8.37e-30 | 119 |
| MS.gene63163.t1 | AT5G28770 | 49.462 | 93 | 43 | 2 | 402 | 494 | 171 | 259 | 4.55e-15 | 76.6 |
| MS.gene63163.t1 | AT5G28770 | 49.462 | 93 | 43 | 2 | 402 | 494 | 164 | 252 | 4.91e-15 | 76.6 |
| MS.gene63163.t1 | AT5G28770 | 57.143 | 56 | 24 | 0 | 402 | 457 | 171 | 226 | 2.47e-11 | 64.7 |
Find 121 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGCTTTGACTCTTCTTTC+TGG | 0.060830 | 8.4:+40575051 | MS.gene63163:CDS |
| GAAGATGTCTCAGATGATTT+TGG | 0.221126 | 8.4:+40575703 | MS.gene63163:CDS |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | 8.4:+40577199 | MS.gene63163:CDS |
| TACACAACAACATATATTTC+AGG | 0.264578 | 8.4:-40575364 | None:intergenic |
| CTTAGGAATCAAAGAGAAAA+AGG | 0.267105 | 8.4:-40574842 | None:intergenic |
| GTGCGCAATTCGAATCTTGC+TGG | 0.282423 | 8.4:+40577584 | MS.gene63163:CDS |
| AAGCTTTGACTCTTCTTTCT+GGG | 0.296786 | 8.4:+40575052 | MS.gene63163:CDS |
| CTATGAGTGGTGTAACTATT+TGG | 0.306445 | 8.4:+40577666 | MS.gene63163:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.308532 | 8.4:+40577598 | MS.gene63163:CDS |
| CAAGAAGTTTGCTGGGACAT+TGG | 0.347751 | 8.4:+40575727 | MS.gene63163:CDS |
| AATTCGAATCTTGCTGGGTT+TGG | 0.349242 | 8.4:+40577590 | MS.gene63163:CDS |
| ACCTTCTCAGGCAAGAGAAC+AGG | 0.350066 | 8.4:+40574782 | MS.gene63163:CDS |
| TCTTTCATACGCAGAGCTTC+TGG | 0.357829 | 8.4:-40574736 | None:intergenic |
| GAAATGGTCTCTAAAGTTGC+AGG | 0.361989 | 8.4:-40575806 | None:intergenic |
| ATCCCTGTATGATACCCTTC+TGG | 0.369495 | 8.4:+40575586 | MS.gene63163:CDS |
| TGGTTGACCGTCTTTATGTT+AGG | 0.371212 | 8.4:+40575843 | MS.gene63163:CDS |
| CACTTTCCCAACATTGGAAA+TGG | 0.391471 | 8.4:-40575822 | None:intergenic |
| ATTTCCCTGCAGGACATTGA+TGG | 0.395593 | 8.4:-40577531 | None:intergenic |
| GAAATGTGTCTGTGAACAAT+TGG | 0.398724 | 8.4:-40575563 | None:intergenic |
| CTGGGTTGGTCAAAGAGGTT+AGG | 0.401504 | 8.4:+40575070 | MS.gene63163:CDS |
| TAGAGACCATTTCCAATGTT+GGG | 0.407846 | 8.4:+40575816 | MS.gene63163:CDS |
| TTCCGCTCAACGTGATCAAT+TGG | 0.408482 | 8.4:-40575683 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 8.4:-40577498 | None:intergenic |
| ACAATGATGTTGTCGACAAT+GGG | 0.410740 | 8.4:+40577630 | MS.gene63163:CDS |
| TTTGACTCTTCTTTCTGGGT+TGG | 0.413470 | 8.4:+40575056 | MS.gene63163:CDS |
| CAGGACTACAAGGCACAGTT+GGG | 0.423474 | 8.4:+40575533 | MS.gene63163:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 8.4:+40577385 | MS.gene63163:intron |
| TTCTGGAGCAGAATCTTTGT+AGG | 0.427259 | 8.4:+40575603 | MS.gene63163:CDS |
| GGGTATATTGCATCAGTCTT+GGG | 0.434505 | 8.4:-40575785 | None:intergenic |
| CATTTCCAATGTTGGGAAAG+TGG | 0.438184 | 8.4:+40575823 | MS.gene63163:CDS |
| CCCTGTTCTCTTGCCTGAGA+AGG | 0.446003 | 8.4:-40574783 | None:intergenic |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 8.4:-40577558 | None:intergenic |
| TTGGTCTGAACTTGAGTCTC+AGG | 0.450575 | 8.4:+40576928 | MS.gene63163:CDS |
| CAAATCTTACTGACCTTCTC+AGG | 0.450662 | 8.4:+40574770 | MS.gene63163:CDS |
| AGGGTATATTGCATCAGTCT+TGG | 0.452702 | 8.4:-40575786 | None:intergenic |
| TTCAGGCTGAAAATAGCCTT+AGG | 0.454754 | 8.4:-40575347 | None:intergenic |
| GGAATTATTTCTTCTAAAGC+AGG | 0.456178 | 8.4:+40575419 | MS.gene63163:CDS |
| GATTTCACTGTGTAAAGAAA+TGG | 0.466235 | 8.4:+40574936 | MS.gene63163:CDS |
| GGATTCAATTGCTCAGGCAT+TGG | 0.471759 | 8.4:+40574648 | MS.gene63163:CDS |
| ATCAAGTACACGATAAAGAA+TGG | 0.473844 | 8.4:-40574698 | None:intergenic |
| GCTCCAGAAGGGTATCATAC+AGG | 0.475823 | 8.4:-40575589 | None:intergenic |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 8.4:+40577526 | MS.gene63163:CDS |
| AAAGCAGGATTGCAATATGT+TGG | 0.477736 | 8.4:+40575434 | MS.gene63163:CDS |
| TGCGCAATTCGAATCTTGCT+GGG | 0.480163 | 8.4:+40577585 | MS.gene63163:CDS |
| GCTTTCATCGCATCCAAGTC+AGG | 0.487211 | 8.4:-40575458 | None:intergenic |
| TTAGAGACCATTTCCAATGT+TGG | 0.488579 | 8.4:+40575815 | MS.gene63163:CDS |
| GCAGGACTACAAGGCACAGT+TGG | 0.489808 | 8.4:+40575532 | MS.gene63163:CDS |
| GTCAACCACTTTCCCAACAT+TGG | 0.491783 | 8.4:-40575828 | None:intergenic |
| CTTAGAAGCTTTGAGAGCTA+AGG | 0.494769 | 8.4:+40577277 | MS.gene63163:CDS |
| TTCAATTGCTCAGGCATTGG+AGG | 0.497862 | 8.4:+40574651 | MS.gene63163:CDS |
| AAGCAGGATTGCAATATGTT+GGG | 0.498799 | 8.4:+40575435 | MS.gene63163:CDS |
| AACTGCTTTGCAGGACTACA+AGG | 0.501162 | 8.4:+40575523 | MS.gene63163:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 8.4:-40577527 | None:intergenic |
| TACAATGATGTTGTCGACAA+TGG | 0.508346 | 8.4:+40577629 | MS.gene63163:CDS |
| ATTGAATATAACGAGGCATC+CGG | 0.509500 | 8.4:-40575759 | None:intergenic |
| CAATGCTCTTGAAGACCCTA+AGG | 0.511010 | 8.4:+40575331 | MS.gene63163:CDS |
| GCAATATGTTGGGCCTGACT+TGG | 0.511624 | 8.4:+40575445 | MS.gene63163:CDS |
| CCTTCTCAGGCAAGAGAACA+GGG | 0.514248 | 8.4:+40574783 | MS.gene63163:CDS |
| TTGTCGACAACATCATTGTA+AGG | 0.519538 | 8.4:-40577626 | None:intergenic |
| TCAGGCTGAAAATAGCCTTA+GGG | 0.519784 | 8.4:-40575346 | None:intergenic |
| GCAATCTCAACTCTTGAGAA+TGG | 0.520686 | 8.4:-40575635 | None:intergenic |
| GCAATTGAATCCGTTGTGGC+AGG | 0.520844 | 8.4:-40574637 | None:intergenic |
| GACTCAGTTGCTAAAATACC+AGG | 0.527380 | 8.4:+40574898 | MS.gene63163:CDS |
| CACAACGGATTCAATTGCTC+AGG | 0.533092 | 8.4:+40574642 | MS.gene63163:CDS |
| AAGAGCATTGAAAGACTCAA+AGG | 0.538169 | 8.4:-40575318 | None:intergenic |
| AGCTCTGCGTATGAAAGAGC+AGG | 0.542904 | 8.4:+40574741 | MS.gene63163:CDS |
| CTCCAGAAGGGTATCATACA+GGG | 0.544409 | 8.4:-40575588 | None:intergenic |
| ATGAGGCACTATTTCCCTGC+AGG | 0.545708 | 8.4:-40577541 | None:intergenic |
| CACCACTCATAGCATTGCTT+AGG | 0.546328 | 8.4:-40577655 | None:intergenic |
| AGAGCTTCTGGTGAAGAAGA+TGG | 0.548989 | 8.4:-40574724 | None:intergenic |
| TATGTTGTTGTGTAAGATCA+TGG | 0.550906 | 8.4:+40575373 | MS.gene63163:CDS |
| TCTTTCTGGGTTGGTCAAAG+AGG | 0.554089 | 8.4:+40575065 | MS.gene63163:CDS |
| TTTGCTGGGACATTGGATCA+AGG | 0.555668 | 8.4:+40575734 | MS.gene63163:CDS |
| AAATGTGTCTGTGAACAATT+GGG | 0.557966 | 8.4:-40575562 | None:intergenic |
| AGAATGGATCTCGCATCAGA+AGG | 0.560828 | 8.4:-40574682 | None:intergenic |
| ATCTGTAGATCAGATGTCCC+TGG | 0.569702 | 8.4:-40574916 | None:intergenic |
| TACAAAGATTCTGCTCCAGA+AGG | 0.569886 | 8.4:-40575601 | None:intergenic |
| GCGAGTCAGCCAAGAGGTCA+AGG | 0.571020 | 8.4:+40576888 | MS.gene63163:CDS |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 8.4:-40577426 | None:intergenic |
| CAGGGAAATAGTGCCTCATA+CGG | 0.572012 | 8.4:+40577545 | MS.gene63163:CDS |
| TTCCAATTGATCACGTTGAG+CGG | 0.579853 | 8.4:+40575681 | MS.gene63163:CDS |
| GAATGGATCTCGCATCAGAA+GGG | 0.580110 | 8.4:-40574681 | None:intergenic |
| GGGACATTGGATCAAGGTGC+CGG | 0.586404 | 8.4:+40575740 | MS.gene63163:CDS |
| GCAGCCTTCTCACTTCATTG+AGG | 0.586407 | 8.4:+40574818 | MS.gene63163:CDS |
| CTCATTAAGAAACCTTCCAA+AGG | 0.587775 | 8.4:+40575149 | MS.gene63163:CDS |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 8.4:+40577560 | MS.gene63163:CDS |
| AGCTGTTCTAGCAGCCGTGA+GGG | 0.592486 | 8.4:-40575181 | None:intergenic |
| CAGGCAAGAGAACAGGGGAG+AGG | 0.594061 | 8.4:+40574789 | MS.gene63163:CDS |
| ATCTTATCTTCCTGCCACAA+CGG | 0.596364 | 8.4:+40574627 | MS.gene63163:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 8.4:+40577556 | MS.gene63163:CDS |
| AAGGTCAGTAAGATTTGTGA+TGG | 0.606087 | 8.4:-40574764 | None:intergenic |
| AGGGCCTCAATGAAGTGAGA+AGG | 0.611750 | 8.4:-40574822 | None:intergenic |
| ACAAAGATTCTGCTCCAGAA+GGG | 0.620348 | 8.4:-40575600 | None:intergenic |
| GGAAATAGTGCCTCATACGG+TGG | 0.626744 | 8.4:+40577548 | MS.gene63163:CDS |
| AAAACTGCAAAGATTGTAAG+GGG | 0.631797 | 8.4:+40574868 | MS.gene63163:CDS |
| CAGCTGTTCTAGCAGCCGTG+AGG | 0.638157 | 8.4:-40575182 | None:intergenic |
| AAATGGTCTCTAAAGTTGCA+GGG | 0.639902 | 8.4:-40575805 | None:intergenic |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 8.4:+40577527 | MS.gene63163:CDS |
| GGTGGAGAAAACAAGCACAT+TGG | 0.651702 | 8.4:+40576909 | MS.gene63163:CDS |
| GGTGAATCAAGCTGATGATG+TGG | 0.654166 | 8.4:+40575394 | MS.gene63163:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | 8.4:+40577223 | MS.gene63163:CDS |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 8.4:+40577379 | MS.gene63163:intron |
| AAAGGCAAAAGCTTCCCTCA+CGG | 0.672986 | 8.4:+40575167 | MS.gene63163:CDS |
| TGGCAGACCTAACATAAAGA+CGG | 0.674723 | 8.4:-40575850 | None:intergenic |
| AGGAAGATAAGATGTAGACA+TGG | 0.676910 | 8.4:-40574617 | None:intergenic |
| GTGAATCAAGCTGATGATGT+GGG | 0.683700 | 8.4:+40575395 | MS.gene63163:CDS |
| GTCCTAAGCAATGCTATGAG+TGG | 0.683900 | 8.4:+40577653 | MS.gene63163:CDS |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.684615 | 8.4:+40576891 | MS.gene63163:CDS |
| AATCAAGCTGATGATGTGGG+TGG | 0.686446 | 8.4:+40575398 | MS.gene63163:CDS |
| AGGACTACAAGGCACAGTTG+GGG | 0.686447 | 8.4:+40575534 | MS.gene63163:CDS |
| GGACTACAAGGCACAGTTGG+GGG | 0.689123 | 8.4:+40575535 | MS.gene63163:CDS |
| CTGAGCAATTGAATCCGTTG+TGG | 0.699339 | 8.4:-40574641 | None:intergenic |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 8.4:-40577479 | None:intergenic |
| TGTGTAAAGAAATGGTGCAG+TGG | 0.703348 | 8.4:+40574944 | MS.gene63163:CDS |
| CTTCTCAGGCAAGAGAACAG+GGG | 0.711755 | 8.4:+40574784 | MS.gene63163:CDS |
| CTAATTGCGAGTCAGCCAAG+AGG | 0.711883 | 8.4:+40576882 | MS.gene63163:CDS |
| ACTCAGTTGCTAAAATACCA+GGG | 0.713806 | 8.4:+40574899 | MS.gene63163:CDS |
| CAATGATGTTGTCGACAATG+GGG | 0.725562 | 8.4:+40577631 | MS.gene63163:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 8.4:-40577508 | None:intergenic |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 8.4:-40577515 | None:intergenic |
| TGGGATCATTGAATATAACG+AGG | 0.749025 | 8.4:-40575766 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAAAATTACATGTA+TGG | - | chr8.4:40576253-40576272 | None:intergenic | 10.0% |
| !! | TGATGTCATAATATAAATTA+TGG | + | chr8.4:40576399-40576418 | MS.gene63163:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr8.4:40577364-40577383 | MS.gene63163:intron | 15.0% |
| !! | ATATGATGAATTTGAATGAT+TGG | + | chr8.4:40576444-40576463 | MS.gene63163:intron | 20.0% |
| !! | ATGACGTTTAAATAACTAAA+CGG | - | chr8.4:40576542-40576561 | None:intergenic | 20.0% |
| !! | ATGATGTTCAGAATAATTAA+CGG | - | chr8.4:40576574-40576593 | None:intergenic | 20.0% |
| !! | GAAACAAAAAAAAGATATGA+AGG | - | chr8.4:40576167-40576186 | None:intergenic | 20.0% |
| !! | TATGATGAATTTGAATGATT+GGG | + | chr8.4:40576445-40576464 | MS.gene63163:intron | 20.0% |
| !!! | AACTTAACTAATCAATGTTT+TGG | + | chr8.4:40576952-40576971 | MS.gene63163:intron | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr8.4:40576983-40577002 | MS.gene63163:intron | 20.0% |
| !!! | ACAACACTTTTTATTATATG+TGG | + | chr8.4:40576806-40576825 | MS.gene63163:intron | 20.0% |
| !!! | ACTTTTTATTATATGTGGTT+TGG | + | chr8.4:40576811-40576830 | MS.gene63163:intron | 20.0% |
| ! | AAAAACTGCAAAGATTGTAA+GGG | + | chr8.4:40574867-40574886 | MS.gene63163:CDS | 25.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | chr8.4:40577199-40577218 | MS.gene63163:CDS | 25.0% |
| ! | AATTTGTGTACCTTTGAATT+AGG | - | chr8.4:40576679-40576698 | None:intergenic | 25.0% |
| ! | AGAATAATTAACGGTCTAAT+GGG | - | chr8.4:40576565-40576584 | None:intergenic | 25.0% |
| ! | AGATCACTAGATACAAATTA+TGG | - | chr8.4:40576731-40576750 | None:intergenic | 25.0% |
| ! | ATTGAGTCGAATGTTTAAAA+GGG | + | chr8.4:40575991-40576010 | MS.gene63163:intron | 25.0% |
| ! | CATATCATCAATAATAGAGA+AGG | - | chr8.4:40576708-40576727 | None:intergenic | 25.0% |
| ! | TACACAACAACATATATTTC+AGG | - | chr8.4:40575367-40575386 | None:intergenic | 25.0% |
| ! | TATTGAGTCGAATGTTTAAA+AGG | + | chr8.4:40575990-40576009 | MS.gene63163:intron | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | chr8.4:40577152-40577171 | None:intergenic | 25.0% |
| ! | TTAAATAACTAAACGGTTGA+GGG | - | chr8.4:40576535-40576554 | None:intergenic | 25.0% |
| ! | TTAGGAATCAAAGAGAAAAA+GGG | - | chr8.4:40574844-40574863 | None:intergenic | 25.0% |
| ! | TTTAAATAACTAAACGGTTG+AGG | - | chr8.4:40576536-40576555 | None:intergenic | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | chr8.4:40577047-40577066 | MS.gene63163:intron | 25.0% |
| !!! | AAGCTTACTTCTTTTTTGAA+TGG | + | chr8.4:40576215-40576234 | MS.gene63163:intron | 25.0% |
| !!! | TCTTTTTTTTGTTTCCCTAT+CGG | + | chr8.4:40576172-40576191 | MS.gene63163:intron | 25.0% |
| !!! | TTTTAATTAGGTGTTCTCTT+TGG | + | chr8.4:40576050-40576069 | MS.gene63163:intron | 25.0% |
| AAAACTGCAAAGATTGTAAG+GGG | + | chr8.4:40574868-40574887 | MS.gene63163:CDS | 30.0% | |
| AAACTGATTGTTTAGTGATG+TGG | - | chr8.4:40577429-40577448 | None:intergenic | 30.0% | |
| AAATGATATACCAGTCAGAA+TGG | - | chr8.4:40575940-40575959 | None:intergenic | 30.0% | |
| AAATGTGTCTGTGAACAATT+GGG | - | chr8.4:40575565-40575584 | None:intergenic | 30.0% | |
| AAGCAGTTTCGAAAAACTTA+AGG | - | chr8.4:40575511-40575530 | None:intergenic | 30.0% | |
| AATGTTTAAAAGGGCTTATG+CGG | + | chr8.4:40576000-40576019 | MS.gene63163:intron | 30.0% | |
| AGCAGTTTCGAAAAACTTAA+GGG | - | chr8.4:40575510-40575529 | None:intergenic | 30.0% | |
| ATCAAGTACACGATAAAGAA+TGG | - | chr8.4:40574701-40574720 | None:intergenic | 30.0% | |
| ATTGGGCTATTGTTACTAAA+TGG | + | chr8.4:40576462-40576481 | MS.gene63163:intron | 30.0% | |
| ATTTAGATAAGCTCAATGAG+AGG | + | chr8.4:40576503-40576522 | MS.gene63163:intron | 30.0% | |
| CAAAAACTGCAAAGATTGTA+AGG | + | chr8.4:40574866-40574885 | MS.gene63163:CDS | 30.0% | |
| CAGAATAATTAACGGTCTAA+TGG | - | chr8.4:40576566-40576585 | None:intergenic | 30.0% | |
| CATGCTTCAATTGAAATAGT+AGG | - | chr8.4:40577076-40577095 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | chr8.4:40577153-40577172 | None:intergenic | 30.0% | |
| CTTAGGAATCAAAGAGAAAA+AGG | - | chr8.4:40574845-40574864 | None:intergenic | 30.0% | |
| GATTTCACTGTGTAAAGAAA+TGG | + | chr8.4:40574936-40574955 | MS.gene63163:CDS | 30.0% | |
| TACTAGTCAACAATTTCATG+AGG | + | chr8.4:40577223-40577242 | MS.gene63163:CDS | 30.0% | |
| TATGTTGTTGTGTAAGATCA+TGG | + | chr8.4:40575373-40575392 | MS.gene63163:CDS | 30.0% | |
| TCTCATTGAGCTTATCTAAA+TGG | - | chr8.4:40576504-40576523 | None:intergenic | 30.0% | |
| TGATATAATGATTCCTGACA+TGG | + | chr8.4:40576845-40576864 | MS.gene63163:intron | 30.0% | |
| ! | CTTTTTCTCTTTGATTCCTA+AGG | + | chr8.4:40574843-40574862 | MS.gene63163:CDS | 30.0% |
| ! | TAGTTTCCTTTGAACCTTTT+CGG | + | chr8.4:40575963-40575982 | MS.gene63163:intron | 30.0% |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | chr8.4:40577151-40577170 | MS.gene63163:intron | 30.0% |
| !! | GGAATTATTTCTTCTAAAGC+AGG | + | chr8.4:40575419-40575438 | MS.gene63163:CDS | 30.0% |
| AAAGCAGGATTGCAATATGT+TGG | + | chr8.4:40575434-40575453 | MS.gene63163:CDS | 35.0% | |
| AAGCAGGATTGCAATATGTT+GGG | + | chr8.4:40575435-40575454 | MS.gene63163:CDS | 35.0% | |
| AAGGTCAGTAAGATTTGTGA+TGG | - | chr8.4:40574767-40574786 | None:intergenic | 35.0% | |
| AATTAAAATCACACCCTTCC+TGG | - | chr8.4:40576038-40576057 | None:intergenic | 35.0% | |
| AATTAGGTGTTCTCTTTGGT+TGG | + | chr8.4:40576054-40576073 | MS.gene63163:intron | 35.0% | |
| ACAATGATGTTGTCGACAAT+GGG | + | chr8.4:40577630-40577649 | MS.gene63163:CDS | 35.0% | |
| ACTCAGTTGCTAAAATACCA+GGG | + | chr8.4:40574899-40574918 | MS.gene63163:CDS | 35.0% | |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr8.4:40577379-40577398 | MS.gene63163:intron | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | chr8.4:40577009-40577028 | MS.gene63163:intron | 35.0% | |
| CCTTCATCAACCTAATTCAA+AGG | + | chr8.4:40576666-40576685 | MS.gene63163:intron | 35.0% | |
| CTATGAGTGGTGTAACTATT+TGG | + | chr8.4:40577666-40577685 | MS.gene63163:CDS | 35.0% | |
| CTCATTAAGAAACCTTCCAA+AGG | + | chr8.4:40575149-40575168 | MS.gene63163:CDS | 35.0% | |
| GAAATGTGTCTGTGAACAAT+TGG | - | chr8.4:40575566-40575585 | None:intergenic | 35.0% | |
| TACAATGATGTTGTCGACAA+TGG | + | chr8.4:40577629-40577648 | MS.gene63163:CDS | 35.0% | |
| TAGAGACCATTTCCAATGTT+GGG | + | chr8.4:40575816-40575835 | MS.gene63163:CDS | 35.0% | |
| TGCAGAAATTGAATCCGATA+GGG | - | chr8.4:40576189-40576208 | None:intergenic | 35.0% | |
| TGGGATCATTGAATATAACG+AGG | - | chr8.4:40575769-40575788 | None:intergenic | 35.0% | |
| TGTGAAAACCTAAAGCTAGA+CGG | + | chr8.4:40576594-40576613 | MS.gene63163:intron | 35.0% | |
| TTAGAGACCATTTCCAATGT+TGG | + | chr8.4:40575815-40575834 | MS.gene63163:CDS | 35.0% | |
| TTGTCGACAACATCATTGTA+AGG | - | chr8.4:40577629-40577648 | None:intergenic | 35.0% | |
| ! | AAGCTTTGACTCTTCTTTCT+GGG | + | chr8.4:40575052-40575071 | MS.gene63163:CDS | 35.0% |
| ! | AGCACTTTTGATGGAAACTA+AGG | + | chr8.4:40575020-40575039 | MS.gene63163:CDS | 35.0% |
| ! | AGTTTCCTTTGAACCTTTTC+GGG | + | chr8.4:40575964-40575983 | MS.gene63163:intron | 35.0% |
| ! | ATCTTTGCAGTTTTTGCCTT+AGG | - | chr8.4:40574862-40574881 | None:intergenic | 35.0% |
| ! | ATTGAATATAACGAGGCATC+CGG | - | chr8.4:40575762-40575781 | None:intergenic | 35.0% |
| ! | ATTGAGTATTGTCATCCAAG+TGG | + | chr8.4:40576312-40576331 | MS.gene63163:intron | 35.0% |
| ! | ATTTTGGACAAGAAGTTTGC+TGG | + | chr8.4:40575719-40575738 | MS.gene63163:CDS | 35.0% |
| ! | GAAGATGTCTCAGATGATTT+TGG | + | chr8.4:40575703-40575722 | MS.gene63163:CDS | 35.0% |
| ! | GGAAAACCACTCTCATTTTA+TGG | + | chr8.4:40576107-40576126 | MS.gene63163:intron | 35.0% |
| ! | GTTTTCTTTTCCATTCTGAC+TGG | + | chr8.4:40575927-40575946 | MS.gene63163:intron | 35.0% |
| ! | TATTCCACTCTGAAGATCTA+TGG | - | chr8.4:40575246-40575265 | None:intergenic | 35.0% |
| ! | TTGAGTATTGTCATCCAAGT+GGG | + | chr8.4:40576313-40576332 | MS.gene63163:intron | 35.0% |
| !! | AAATGGTCTCTAAAGTTGCA+GGG | - | chr8.4:40575808-40575827 | None:intergenic | 35.0% |
| !! | AAGAGCATTGAAAGACTCAA+AGG | - | chr8.4:40575321-40575340 | None:intergenic | 35.0% |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | chr8.4:40576669-40576688 | None:intergenic | 35.0% |
| !! | CTAAGTCTGATTTTAGCACT+CGG | - | chr8.4:40577262-40577281 | None:intergenic | 35.0% |
| !! | TTTTGGACAAGAAGTTTGCT+GGG | + | chr8.4:40575720-40575739 | MS.gene63163:CDS | 35.0% |
| !!! | GGAAGGGTGTGATTTTAATT+AGG | + | chr8.4:40576038-40576057 | MS.gene63163:intron | 35.0% |
| AACAGCAAGTAATGTAGCAC+TGG | - | chr8.4:40575910-40575929 | None:intergenic | 40.0% | |
| AATACTTCATGCTGAGGAGA+AGG | + | chr8.4:40575262-40575281 | MS.gene63163:intron | 40.0% | |
| AATTCGAATCTTGCTGGGTT+TGG | + | chr8.4:40577590-40577609 | MS.gene63163:CDS | 40.0% | |
| ACAAAGATTCTGCTCCAGAA+GGG | - | chr8.4:40575603-40575622 | None:intergenic | 40.0% | |
| AGGGTATATTGCATCAGTCT+TGG | - | chr8.4:40575789-40575808 | None:intergenic | 40.0% | |
| ATAGTTGTCGACGTTGTCTA+CGG | + | chr8.4:40576639-40576658 | MS.gene63163:intron | 40.0% | |
| ATCTTATCTTCCTGCCACAA+CGG | + | chr8.4:40574627-40574646 | MS.gene63163:CDS | 40.0% | |
| ATTCCTGACATGGTTTCAGA+AGG | + | chr8.4:40576855-40576874 | MS.gene63163:intron | 40.0% | |
| CAAATCTTACTGACCTTCTC+AGG | + | chr8.4:40574770-40574789 | MS.gene63163:CDS | 40.0% | |
| CAATGATGTTGTCGACAATG+GGG | + | chr8.4:40577631-40577650 | MS.gene63163:CDS | 40.0% | |
| CACTTTCCCAACATTGGAAA+TGG | - | chr8.4:40575825-40575844 | None:intergenic | 40.0% | |
| CATTTCCAATGTTGGGAAAG+TGG | + | chr8.4:40575823-40575842 | MS.gene63163:CDS | 40.0% | |
| CTGCAGAAATTGAATCCGAT+AGG | - | chr8.4:40576190-40576209 | None:intergenic | 40.0% | |
| GACTCAGTTGCTAAAATACC+AGG | + | chr8.4:40574898-40574917 | MS.gene63163:CDS | 40.0% | |
| GCAATCTCAACTCTTGAGAA+TGG | - | chr8.4:40575638-40575657 | None:intergenic | 40.0% | |
| GGGTATATTGCATCAGTCTT+GGG | - | chr8.4:40575788-40575807 | None:intergenic | 40.0% | |
| GTGTTATGAAGAACCAGGAA+GGG | + | chr8.4:40576022-40576041 | MS.gene63163:intron | 40.0% | |
| GTTACTAAATGGACCGTGAT+GGG | + | chr8.4:40576473-40576492 | MS.gene63163:intron | 40.0% | |
| GTTGAGATGCGAGGATAAAA+GGG | + | chr8.4:40576076-40576095 | MS.gene63163:intron | 40.0% | |
| TAACACCCGAAAAGGTTCAA+AGG | - | chr8.4:40575972-40575991 | None:intergenic | 40.0% | |
| TAATCCAACAATCTCCCACT+TGG | - | chr8.4:40576330-40576349 | None:intergenic | 40.0% | |
| TACAAAGATTCTGCTCCAGA+AGG | - | chr8.4:40575604-40575623 | None:intergenic | 40.0% | |
| TGGCAGACCTAACATAAAGA+CGG | - | chr8.4:40575853-40575872 | None:intergenic | 40.0% | |
| TGGTTGACCGTCTTTATGTT+AGG | + | chr8.4:40575843-40575862 | MS.gene63163:CDS | 40.0% | |
| TGTGAGCCATAAAATGAGAG+TGG | - | chr8.4:40576116-40576135 | None:intergenic | 40.0% | |
| TGTGTAAAGAAATGGTGCAG+TGG | + | chr8.4:40574944-40574963 | MS.gene63163:CDS | 40.0% | |
| TGTTACTAAATGGACCGTGA+TGG | + | chr8.4:40576472-40576491 | MS.gene63163:intron | 40.0% | |
| TTCAGGCTGAAAATAGCCTT+AGG | - | chr8.4:40575350-40575369 | None:intergenic | 40.0% | |
| TTCCAATTGATCACGTTGAG+CGG | + | chr8.4:40575681-40575700 | MS.gene63163:CDS | 40.0% | |
| TTCCTGACATGGTTTCAGAA+GGG | + | chr8.4:40576856-40576875 | MS.gene63163:intron | 40.0% | |
| TTGAGATGCGAGGATAAAAG+GGG | + | chr8.4:40576077-40576096 | MS.gene63163:intron | 40.0% | |
| TTTGACTCTTCTTTCTGGGT+TGG | + | chr8.4:40575056-40575075 | MS.gene63163:CDS | 40.0% | |
| ! | AAGACTTGCAGCACTTTTGA+TGG | + | chr8.4:40575011-40575030 | MS.gene63163:CDS | 40.0% |
| ! | ACTCTCATTTTATGGCTCAC+AGG | + | chr8.4:40576115-40576134 | MS.gene63163:intron | 40.0% |
| ! | ATTTTATGGCTCACAGGAGA+TGG | + | chr8.4:40576121-40576140 | MS.gene63163:intron | 40.0% |
| ! | GAAGCTTTGACTCTTCTTTC+TGG | + | chr8.4:40575051-40575070 | MS.gene63163:CDS | 40.0% |
| ! | GTGAATCAAGCTGATGATGT+GGG | + | chr8.4:40575395-40575414 | MS.gene63163:CDS | 40.0% |
| ! | TCAGGCTGAAAATAGCCTTA+GGG | - | chr8.4:40575349-40575368 | None:intergenic | 40.0% |
| !! | CTGAAAAGCGTACTTTTCTG+AGG | + | chr8.4:40574974-40574993 | MS.gene63163:CDS | 40.0% |
| !! | CTTAGAAGCTTTGAGAGCTA+AGG | + | chr8.4:40577277-40577296 | MS.gene63163:CDS | 40.0% |
| !! | GAAATGGTCTCTAAAGTTGC+AGG | - | chr8.4:40575809-40575828 | None:intergenic | 40.0% |
| !! | GTTTTTCGAAACTGCTTTGC+AGG | + | chr8.4:40575514-40575533 | MS.gene63163:CDS | 40.0% |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | chr8.4:40577169-40577188 | MS.gene63163:intron | 40.0% |
| !! | TTCTGGAGCAGAATCTTTGT+AGG | + | chr8.4:40575603-40575622 | MS.gene63163:CDS | 40.0% |
| !!! | TTTTCTGAGGCAACGAATTG+AGG | + | chr8.4:40574987-40575006 | MS.gene63163:CDS | 40.0% |
| AAAGGCAAAAGCTTCCCTCA+CGG | + | chr8.4:40575167-40575186 | MS.gene63163:CDS | 45.0% | |
| AACTGCTTTGCAGGACTACA+AGG | + | chr8.4:40575523-40575542 | MS.gene63163:CDS | 45.0% | |
| ACAACGTCGACAACTATGAG+AGG | - | chr8.4:40576636-40576655 | None:intergenic | 45.0% | |
| ACCTAAAGCTAGACGGAATG+AGG | + | chr8.4:40576601-40576620 | MS.gene63163:intron | 45.0% | |
| AGAATGGATCTCGCATCAGA+AGG | - | chr8.4:40574685-40574704 | None:intergenic | 45.0% | |
| AGAGCTTCTGGTGAAGAAGA+TGG | - | chr8.4:40574727-40574746 | None:intergenic | 45.0% | |
| ATAACTAAACGGTTGAGGGC+AGG | - | chr8.4:40576531-40576550 | None:intergenic | 45.0% | |
| ATCCCTGTATGATACCCTTC+TGG | + | chr8.4:40575586-40575605 | MS.gene63163:CDS | 45.0% | |
| ATCTGTAGATCAGATGTCCC+TGG | - | chr8.4:40574919-40574938 | None:intergenic | 45.0% | |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr8.4:40577534-40577553 | None:intergenic | 45.0% | |
| CAACGTCGACAACTATGAGA+GGG | - | chr8.4:40576635-40576654 | None:intergenic | 45.0% | |
| CAATGCTCTTGAAGACCCTA+AGG | + | chr8.4:40575331-40575350 | MS.gene63163:CDS | 45.0% | |
| CACCACTCATAGCATTGCTT+AGG | - | chr8.4:40577658-40577677 | None:intergenic | 45.0% | |
| CAGGGAAATAGTGCCTCATA+CGG | + | chr8.4:40577545-40577564 | MS.gene63163:CDS | 45.0% | |
| CCTAAAGCTAGACGGAATGA+GGG | + | chr8.4:40576602-40576621 | MS.gene63163:intron | 45.0% | |
| CGACTCAATAACACCCGAAA+AGG | - | chr8.4:40575980-40575999 | None:intergenic | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | chr8.4:40576489-40576508 | None:intergenic | 45.0% | |
| CTGAGCAATTGAATCCGTTG+TGG | - | chr8.4:40574644-40574663 | None:intergenic | 45.0% | |
| GAATGGATCTCGCATCAGAA+GGG | - | chr8.4:40574684-40574703 | None:intergenic | 45.0% | |
| GAGTGGAATACTTCATGCTG+AGG | + | chr8.4:40575256-40575275 | MS.gene63163:intron | 45.0% | |
| GGATTCAATTGCTCAGGCAT+TGG | + | chr8.4:40574648-40574667 | MS.gene63163:CDS | 45.0% | |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr8.4:40577385-40577404 | MS.gene63163:intron | 45.0% | |
| GGTGGAGAAAACAAGCACAT+TGG | + | chr8.4:40576909-40576928 | MS.gene63163:CDS | 45.0% | |
| GGTTGAGATGCGAGGATAAA+AGG | + | chr8.4:40576075-40576094 | MS.gene63163:intron | 45.0% | |
| GTCAACCACTTTCCCAACAT+TGG | - | chr8.4:40575831-40575850 | None:intergenic | 45.0% | |
| GTCCTAAGCAATGCTATGAG+TGG | + | chr8.4:40577653-40577672 | MS.gene63163:CDS | 45.0% | |
| TAACTAAACGGTTGAGGGCA+GGG | - | chr8.4:40576530-40576549 | None:intergenic | 45.0% | |
| TCATCCAAGTGGGAGATTGT+TGG | + | chr8.4:40576323-40576342 | MS.gene63163:intron | 45.0% | |
| TCTTGCTGGGTTTGGAAACT+TGG | + | chr8.4:40577598-40577617 | MS.gene63163:CDS | 45.0% | |
| TCTTTCATACGCAGAGCTTC+TGG | - | chr8.4:40574739-40574758 | None:intergenic | 45.0% | |
| TGCGCAATTCGAATCTTGCT+GGG | + | chr8.4:40577585-40577604 | MS.gene63163:CDS | 45.0% | |
| TGTTAGGTCTGCCAAGATCA+TGG | + | chr8.4:40575859-40575878 | MS.gene63163:intron | 45.0% | |
| TTCCGCTCAACGTGATCAAT+TGG | - | chr8.4:40575686-40575705 | None:intergenic | 45.0% | |
| TTGGTCTGAACTTGAGTCTC+AGG | + | chr8.4:40576928-40576947 | MS.gene63163:CDS | 45.0% | |
| TTTGCTGGGACATTGGATCA+AGG | + | chr8.4:40575734-40575753 | MS.gene63163:CDS | 45.0% | |
| ! | AATCAAGCTGATGATGTGGG+TGG | + | chr8.4:40575398-40575417 | MS.gene63163:CDS | 45.0% |
| ! | CACAACGGATTCAATTGCTC+AGG | + | chr8.4:40574642-40574661 | MS.gene63163:CDS | 45.0% |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr8.4:40577482-40577501 | None:intergenic | 45.0% |
| ! | GGTGAATCAAGCTGATGATG+TGG | + | chr8.4:40575394-40575413 | MS.gene63163:CDS | 45.0% |
| ! | GGTGTTATGAAGAACCAGGA+AGG | + | chr8.4:40576021-40576040 | MS.gene63163:intron | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr8.4:40577518-40577537 | None:intergenic | 45.0% |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr8.4:40576900-40576919 | None:intergenic | 45.0% |
| !! | AACCCTTCTGAAACCATGTC+AGG | - | chr8.4:40576861-40576880 | None:intergenic | 45.0% |
| !! | ATGCGGTGTTATGAAGAACC+AGG | + | chr8.4:40576017-40576036 | MS.gene63163:intron | 45.0% |
| !! | CAAGAAGTTTGCTGGGACAT+TGG | + | chr8.4:40575727-40575746 | MS.gene63163:CDS | 45.0% |
| !! | CTCCAGAAGGGTATCATACA+GGG | - | chr8.4:40575591-40575610 | None:intergenic | 45.0% |
| !! | TCTTTCTGGGTTGGTCAAAG+AGG | + | chr8.4:40575065-40575084 | MS.gene63163:CDS | 45.0% |
| !! | TTCAATTGCTCAGGCATTGG+AGG | + | chr8.4:40574651-40574670 | MS.gene63163:CDS | 45.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | chr8.4:40576350-40576369 | MS.gene63163:intron | 5.0% |
| ACCTTCTCAGGCAAGAGAAC+AGG | + | chr8.4:40574782-40574801 | MS.gene63163:CDS | 50.0% | |
| AGATGCGAGGATAAAAGGGG+AGG | + | chr8.4:40576080-40576099 | MS.gene63163:intron | 50.0% | |
| AGCTCTGCGTATGAAAGAGC+AGG | + | chr8.4:40574741-40574760 | MS.gene63163:CDS | 50.0% | |
| AGGACTACAAGGCACAGTTG+GGG | + | chr8.4:40575534-40575553 | MS.gene63163:CDS | 50.0% | |
| AGGGCCTCAATGAAGTGAGA+AGG | - | chr8.4:40574825-40574844 | None:intergenic | 50.0% | |
| ATGTGCCTCCTGCTCAACAA+GGG | + | chr8.4:40575219-40575238 | MS.gene63163:intron | 50.0% | |
| CAGGACTACAAGGCACAGTT+GGG | + | chr8.4:40575533-40575552 | MS.gene63163:CDS | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr8.4:40577527-40577546 | MS.gene63163:CDS | 50.0% | |
| CCTTCTCAGGCAAGAGAACA+GGG | + | chr8.4:40574783-40574802 | MS.gene63163:CDS | 50.0% | |
| CTAATTGCGAGTCAGCCAAG+AGG | + | chr8.4:40576882-40576901 | MS.gene63163:CDS | 50.0% | |
| CTTCTCAGGCAAGAGAACAG+GGG | + | chr8.4:40574784-40574803 | MS.gene63163:CDS | 50.0% | |
| GAGAGCTCATGCCATGATCT+TGG | - | chr8.4:40575873-40575892 | None:intergenic | 50.0% | |
| GATGCGAGGATAAAAGGGGA+GGG | + | chr8.4:40576081-40576100 | MS.gene63163:intron | 50.0% | |
| GCAATATGTTGGGCCTGACT+TGG | + | chr8.4:40575445-40575464 | MS.gene63163:CDS | 50.0% | |
| GCAATTGAATCCGTTGTGGC+AGG | - | chr8.4:40574640-40574659 | None:intergenic | 50.0% | |
| GCAGCCTTCTCACTTCATTG+AGG | + | chr8.4:40574818-40574837 | MS.gene63163:CDS | 50.0% | |
| GCTTTCATCGCATCCAAGTC+AGG | - | chr8.4:40575461-40575480 | None:intergenic | 50.0% | |
| GGAAATAGTGCCTCATACGG+TGG | + | chr8.4:40577548-40577567 | MS.gene63163:CDS | 50.0% | |
| GTGCGCAATTCGAATCTTGC+TGG | + | chr8.4:40577584-40577603 | MS.gene63163:CDS | 50.0% | |
| TATGTGCCTCCTGCTCAACA+AGG | + | chr8.4:40575218-40575237 | MS.gene63163:intron | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr8.4:40577511-40577530 | None:intergenic | 50.0% | |
| ! | ATGAGGCACTATTTCCCTGC+AGG | - | chr8.4:40577544-40577563 | None:intergenic | 50.0% |
| ! | CTTTGGTTGGTTGAGATGCG+AGG | + | chr8.4:40576067-40576086 | MS.gene63163:intron | 50.0% |
| ! | GGGAAGCTTTTGCCTTTGGA+AGG | - | chr8.4:40575164-40575183 | None:intergenic | 50.0% |
| ! | GTGAGGGAAGCTTTTGCCTT+TGG | - | chr8.4:40575168-40575187 | None:intergenic | 50.0% |
| !! | CCCTCATTCCGTCTAGCTTT+AGG | - | chr8.4:40576605-40576624 | None:intergenic | 50.0% |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | chr8.4:40576477-40576496 | MS.gene63163:intron | 50.0% |
| !! | CTGGGTTGGTCAAAGAGGTT+AGG | + | chr8.4:40575070-40575089 | MS.gene63163:CDS | 50.0% |
| !! | GCTCCAGAAGGGTATCATAC+AGG | - | chr8.4:40575592-40575611 | None:intergenic | 50.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr8.4:40577561-40577580 | None:intergenic | 55.0% | |
| AGCTGTTCTAGCAGCCGTGA+GGG | - | chr8.4:40575184-40575203 | None:intergenic | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr8.4:40576891-40576910 | MS.gene63163:CDS | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr8.4:40577501-40577520 | None:intergenic | 55.0% | |
| CCCTGTTCTCTTGCCTGAGA+AGG | - | chr8.4:40574786-40574805 | None:intergenic | 55.0% | |
| CGAGGATAAAAGGGGAGGGA+GGG | + | chr8.4:40576085-40576104 | MS.gene63163:intron | 55.0% | |
| GAGGATAAAAGGGGAGGGAG+GGG | + | chr8.4:40576086-40576105 | MS.gene63163:intron | 55.0% | |
| GCAGGACTACAAGGCACAGT+TGG | + | chr8.4:40575532-40575551 | MS.gene63163:CDS | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr8.4:40577526-40577545 | MS.gene63163:CDS | 55.0% | |
| GGACTACAAGGCACAGTTGG+GGG | + | chr8.4:40575535-40575554 | MS.gene63163:CDS | 55.0% | |
| GGGACATTGGATCAAGGTGC+CGG | + | chr8.4:40575740-40575759 | MS.gene63163:CDS | 55.0% | |
| GGGGCCATAGATCTTCAGAG+TGG | + | chr8.4:40575239-40575258 | MS.gene63163:intron | 55.0% | |
| TCTATGGCCCCTTGTTGAGC+AGG | - | chr8.4:40575230-40575249 | None:intergenic | 55.0% | |
| TGTGCCTCCTGCTCAACAAG+GGG | + | chr8.4:40575220-40575239 | MS.gene63163:intron | 55.0% | |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr8.4:40577530-40577549 | None:intergenic | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr8.4:40577556-40577575 | MS.gene63163:CDS | 55.0% |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr8.4:40577560-40577579 | MS.gene63163:CDS | 55.0% |
| ATGGCCCCTTGTTGAGCAGG+AGG | - | chr8.4:40575227-40575246 | None:intergenic | 60.0% | |
| CAGCTGTTCTAGCAGCCGTG+AGG | - | chr8.4:40575185-40575204 | None:intergenic | 60.0% | |
| CAGGCAAGAGAACAGGGGAG+AGG | + | chr8.4:40574789-40574808 | MS.gene63163:CDS | 60.0% | |
| GCGAGGATAAAAGGGGAGGG+AGG | + | chr8.4:40576084-40576103 | MS.gene63163:intron | 60.0% | |
| GCGAGTCAGCCAAGAGGTCA+AGG | + | chr8.4:40576888-40576907 | MS.gene63163:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 40574619 | 40577694 | 40574619 | ID=MS.gene63163 |
| chr8.4 | mRNA | 40574619 | 40577694 | 40574619 | ID=MS.gene63163.t1;Parent=MS.gene63163 |
| chr8.4 | exon | 40574619 | 40575220 | 40574619 | ID=MS.gene63163.t1.exon1;Parent=MS.gene63163.t1 |
| chr8.4 | CDS | 40574619 | 40575220 | 40574619 | ID=cds.MS.gene63163.t1;Parent=MS.gene63163.t1 |
| chr8.4 | exon | 40575304 | 40575864 | 40575304 | ID=MS.gene63163.t1.exon2;Parent=MS.gene63163.t1 |
| chr8.4 | CDS | 40575304 | 40575864 | 40575304 | ID=cds.MS.gene63163.t1;Parent=MS.gene63163.t1 |
| chr8.4 | exon | 40576874 | 40576949 | 40576874 | ID=MS.gene63163.t1.exon3;Parent=MS.gene63163.t1 |
| chr8.4 | CDS | 40576874 | 40576949 | 40576874 | ID=cds.MS.gene63163.t1;Parent=MS.gene63163.t1 |
| chr8.4 | exon | 40577173 | 40577298 | 40577173 | ID=MS.gene63163.t1.exon4;Parent=MS.gene63163.t1 |
| chr8.4 | CDS | 40577173 | 40577298 | 40577173 | ID=cds.MS.gene63163.t1;Parent=MS.gene63163.t1 |
| chr8.4 | exon | 40577386 | 40577694 | 40577386 | ID=MS.gene63163.t1.exon5;Parent=MS.gene63163.t1 |
| chr8.4 | CDS | 40577386 | 40577694 | 40577386 | ID=cds.MS.gene63163.t1;Parent=MS.gene63163.t1 |
| Gene Sequence |
| Protein sequence |
