AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69732


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69732.t1 MTR_3g080580 96.975 529 16 0 1 529 1 529 0.0 1065
MS.gene69732.t1 MTR_7g029275 57.443 524 196 6 3 519 7 510 0.0 587
MS.gene69732.t1 MTR_7g096340 45.885 486 235 6 40 518 39 503 2.30e-151 443
MS.gene69732.t1 MTR_7g096320 44.400 500 250 5 26 518 26 504 5.89e-147 432
MS.gene69732.t1 MTR_1g070345 45.243 515 248 10 10 517 17 504 6.32e-145 426
MS.gene69732.t1 MTR_1g070365 44.000 525 261 10 1 517 5 504 5.67e-142 419
MS.gene69732.t1 MTR_4g054920 47.046 474 214 9 59 518 67 517 1.58e-137 408
MS.gene69732.t1 MTR_7g088330 43.762 521 262 11 5 517 11 508 6.07e-136 404
MS.gene69732.t1 MTR_2g086040 47.619 462 212 7 59 517 64 498 2.10e-135 402
MS.gene69732.t1 MTR_1g060550 44.068 472 239 6 51 517 61 512 4.33e-131 391
MS.gene69732.t1 MTR_4g075110 39.139 511 278 10 20 517 59 549 2.61e-114 350
MS.gene69732.t1 MTR_1g037560 41.855 442 237 6 86 517 112 543 5.78e-112 343
MS.gene69732.t1 MTR_1g037550 41.295 448 235 7 86 517 112 547 8.31e-112 343
MS.gene69732.t1 MTR_5g019140 37.228 505 273 10 40 517 43 530 2.72e-105 325
MS.gene69732.t1 MTR_4g119660 37.030 505 274 10 40 517 28 515 7.85e-105 324
MS.gene69732.t1 MTR_8g098435 35.872 499 294 10 31 517 21 505 5.30e-100 311
MS.gene69732.t1 MTR_5g070010 35.657 502 275 10 40 517 31 508 1.38e-99 310
MS.gene69732.t1 MTR_1g102220 35.744 484 283 10 43 517 42 506 2.43e-97 304
MS.gene69732.t1 MTR_8g035680 35.062 482 289 10 43 517 48 512 2.30e-95 299
MS.gene69732.t1 MTR_8g035860 36.706 504 277 13 7 497 14 488 1.10e-94 297
MS.gene69732.t1 MTR_8g030590 35.141 498 300 9 40 524 30 517 1.28e-94 298
MS.gene69732.t1 MTR_8g035760 34.583 480 293 9 43 517 48 511 2.24e-93 294
MS.gene69732.t1 MTR_6g004630 34.021 485 293 8 43 517 36 503 5.55e-93 293
MS.gene69732.t1 MTR_8g035820 36.786 473 262 12 38 497 40 488 1.25e-92 292
MS.gene69732.t1 MTR_3g463060 35.510 490 271 9 40 512 36 497 3.88e-92 291
MS.gene69732.t1 MTR_8g035810 34.325 504 294 12 6 497 11 489 9.36e-92 290
MS.gene69732.t1 MTR_6g004600 33.643 538 311 13 1 517 3 515 1.45e-89 284
MS.gene69732.t1 MTR_6g004670 34.021 485 294 8 43 517 37 505 4.31e-89 283
MS.gene69732.t1 MTR_7g033570 33.939 495 301 11 30 517 19 494 2.04e-88 281
MS.gene69732.t1 MTR_6g004610 33.402 482 290 10 49 518 2 464 5.94e-88 279
MS.gene69732.t1 MTR_1g036200 33.583 533 305 14 2 518 1 500 1.93e-87 278
MS.gene69732.t1 MTR_8g088470 34.141 495 301 11 30 517 15 491 4.56e-87 277
MS.gene69732.t1 MTR_1g035790 33.133 498 286 9 41 517 31 502 4.85e-86 275
MS.gene69732.t1 MTR_6g004590 34.325 504 291 12 35 517 31 515 6.94e-86 275
MS.gene69732.t1 MTR_7g033580 33.333 498 300 12 30 517 19 494 2.76e-84 270
MS.gene69732.t1 MTR_1g036270 31.743 545 307 12 2 517 3 511 4.16e-84 270
MS.gene69732.t1 MTR_1g035670 33.797 503 281 12 39 518 30 503 5.94e-84 269
MS.gene69732.t1 MTR_8g035780 34.395 471 281 10 30 489 28 481 1.02e-83 269
MS.gene69732.t1 MTR_1g050362 31.330 549 301 15 2 517 1 506 5.30e-83 267
MS.gene69732.t1 MTR_1g035750 33.806 494 293 15 41 518 31 506 6.23e-79 256
MS.gene69732.t1 MTR_8g035810 33.191 467 275 12 6 460 11 452 6.98e-79 255
MS.gene69732.t1 MTR_1g035760 32.591 494 276 13 39 518 30 480 3.16e-78 254
MS.gene69732.t1 MTR_1g036130 32.806 506 284 15 40 518 31 507 6.64e-78 254
MS.gene69732.t1 MTR_1g035830 33.996 503 283 17 39 517 30 507 5.42e-76 249
MS.gene69732.t1 MTR_1g035580 29.799 547 300 12 2 517 3 496 4.29e-74 243
MS.gene69732.t1 MTR_1g036010 31.774 513 281 16 39 517 30 507 4.61e-74 244
MS.gene69732.t1 MTR_1g035800 32.271 502 293 11 42 517 32 512 4.81e-71 236
MS.gene69732.t1 MTR_1g035940 31.755 507 283 16 42 517 33 507 2.96e-69 231
MS.gene69732.t1 MTR_7g406990 38.028 355 208 6 38 383 45 396 4.57e-68 226
MS.gene69732.t1 MTR_3g080610 46.441 295 72 4 181 474 90 299 6.73e-68 221
MS.gene69732.t1 MTR_8g035680 32.011 378 236 8 147 517 2 365 1.27e-66 220
MS.gene69732.t1 MTR_1g069715 31.350 437 256 11 92 507 1 414 1.85e-61 214
MS.gene69732.t1 MTR_1g070370 44.800 250 125 2 178 426 5 242 4.91e-59 196
MS.gene69732.t1 MTR_1g035860 30.000 480 267 14 5 458 13 449 1.13e-58 202
MS.gene69732.t1 MTR_1g102210 33.613 357 189 9 170 517 44 361 6.00e-56 192
MS.gene69732.t1 MTR_8g035810 31.525 387 238 11 6 380 11 382 1.72e-53 186
MS.gene69732.t1 MTR_4g012320 36.123 227 127 4 292 516 12 222 3.25e-45 159
MS.gene69732.t1 MTR_2g061740 40.816 196 102 2 71 255 3 195 6.98e-40 144
MS.gene69732.t1 MTR_2g061750 40.306 196 103 2 71 255 3 195 7.38e-39 141
MS.gene69732.t1 MTR_7g079440 25.110 454 297 15 80 519 226 650 5.67e-33 134
MS.gene69732.t1 MTR_2g062670 40.761 184 102 3 176 357 66 244 1.58e-31 127
MS.gene69732.t1 MTR_2g062670 34.392 189 82 4 176 364 282 428 1.60e-22 101
MS.gene69732.t1 MTR_8g042020 25.541 462 263 18 84 516 113 522 3.65e-28 118
MS.gene69732.t1 MTR_1g062190 23.725 451 306 16 81 519 117 541 5.87e-28 117
MS.gene69732.t1 MTR_8g042060 24.672 458 280 18 81 516 109 523 7.41e-28 117
MS.gene69732.t1 MTR_8g042000 25.910 467 263 17 81 516 109 523 8.76e-28 117
MS.gene69732.t1 MTR_2g072270 25.508 443 262 13 81 499 109 507 1.35e-27 116
MS.gene69732.t1 MTR_7g079440 25.936 374 246 12 81 442 227 581 8.64e-27 114
MS.gene69732.t1 MTR_2g055430 26.097 433 247 16 80 486 102 487 1.07e-26 114
MS.gene69732.t1 MTR_1g101040 27.670 412 247 17 93 489 112 487 2.13e-26 113
MS.gene69732.t1 MTR_2g072340 26.859 417 232 15 109 496 125 497 2.70e-26 112
MS.gene69732.t1 MTR_1g101050 27.919 394 237 16 108 489 125 483 3.72e-26 112
MS.gene69732.t1 MTR_2g055470 26.097 433 247 16 80 486 102 487 1.01e-25 110
MS.gene69732.t1 MTR_2g072400 24.406 463 288 16 58 499 79 500 1.14e-25 110
MS.gene69732.t1 MTR_8g046580 44.800 125 57 2 383 507 193 305 1.40e-25 107
MS.gene69732.t1 MTR_8g046580 31.156 199 117 4 40 238 12 190 6.84e-22 96.7
MS.gene69732.t1 MTR_8g042060 24.503 453 251 17 81 516 109 487 3.72e-25 108
MS.gene69732.t1 MTR_6g072490 27.157 394 240 16 108 489 127 485 6.16e-25 108
MS.gene69732.t1 MTR_6g017325 26.455 378 232 11 118 486 136 476 9.36e-25 108
MS.gene69732.t1 MTR_2g023680 25.463 432 270 11 84 499 107 502 9.93e-25 108
MS.gene69732.t1 MTR_1g069200 25.566 442 286 16 69 499 87 496 4.14e-24 106
MS.gene69732.t1 MTR_5g009110 21.895 475 319 15 80 517 111 570 2.29e-23 104
MS.gene69732.t1 MTR_7g006900 25.532 376 238 10 118 486 101 441 3.13e-23 103
MS.gene69732.t1 MTR_0025s0110 25.510 392 251 14 108 489 138 498 3.27e-23 103
MS.gene69732.t1 MTR_8g042040 25.282 443 272 19 84 516 113 506 3.70e-22 100
MS.gene69732.t1 MTR_4g104610 23.848 499 314 18 11 486 10 465 6.61e-22 99.4
MS.gene69732.t1 MTR_4g031820 25.052 483 291 19 58 516 92 527 6.99e-22 99.4
MS.gene69732.t1 MTR_0147s0030 24.554 448 258 13 64 488 112 502 1.04e-21 99.0
MS.gene69732.t1 MTR_5g095290 25.000 520 294 25 5 487 5 465 1.79e-21 98.2
MS.gene69732.t1 MTR_2g072310 25.915 355 200 12 169 499 20 335 2.43e-21 95.9
MS.gene69732.t1 MTR_5g091760 25.549 501 316 19 5 497 7 458 3.64e-21 97.1
MS.gene69732.t1 MTR_3g093530 26.039 457 269 16 53 486 83 493 5.62e-21 96.7
MS.gene69732.t1 MTR_2g072260 25.342 438 244 17 80 486 95 480 6.07e-21 96.3
MS.gene69732.t1 MTR_5g070710 23.633 512 310 19 2 486 8 465 9.32e-21 95.9
MS.gene69732.t1 MTR_0181s0030 25.586 512 301 20 4 486 6 466 2.32e-20 94.7
MS.gene69732.t1 MTR_6g084770 24.625 467 294 12 40 486 41 469 2.42e-20 94.7
MS.gene69732.t1 MTR_2g061200 24.810 395 251 12 115 489 133 501 2.49e-20 94.7
MS.gene69732.t1 MTR_7g055793 25.971 412 263 15 86 488 117 495 4.10e-20 94.0
MS.gene69732.t1 MTR_5g019010 24.376 521 315 19 7 494 7 481 4.78e-20 93.6
MS.gene69732.t1 MTR_4g031820 24.628 471 286 18 58 516 92 505 4.98e-20 93.6
MS.gene69732.t1 MTR_7g055793 25.971 412 263 15 86 488 62 440 5.76e-20 93.2
MS.gene69732.t1 MTR_2g072250 25.850 441 260 18 80 496 98 495 7.85e-20 93.2
MS.gene69732.t1 MTR_5g095230 24.429 438 276 18 80 499 98 498 7.99e-20 93.2
MS.gene69732.t1 MTR_2g010380 31.602 231 136 6 265 487 261 477 9.41e-20 92.8
MS.gene69732.t1 MTR_2g072380 24.868 378 207 14 169 516 20 350 1.03e-19 91.3
MS.gene69732.t1 MTR_2g061760 40.404 99 59 0 157 255 3 101 1.06e-19 85.1
MS.gene69732.t1 MTR_2g010330 24.706 425 278 11 80 487 76 475 2.50e-19 91.3
MS.gene69732.t1 MTR_0171s0020 24.852 507 324 19 1 487 4 473 2.60e-19 91.3
MS.gene69732.t1 MTR_2g072380 25.066 379 205 15 169 516 160 490 4.28e-19 90.5
MS.gene69732.t1 MTR_2g010250 24.793 484 307 19 30 487 21 473 4.33e-19 90.9
MS.gene69732.t1 MTR_5g009110 21.789 436 290 14 119 517 1 422 1.17e-18 89.0
MS.gene69732.t1 MTR_4g104550 23.276 464 304 16 39 487 31 457 1.88e-18 88.6
MS.gene69732.t1 MTR_8g008530 23.776 429 283 11 65 487 99 489 1.92e-18 89.0
MS.gene69732.t1 MTR_5g034900 24.174 484 306 13 40 491 35 489 2.57e-18 88.2
MS.gene69732.t1 MTR_2g010320 29.565 230 142 5 265 487 255 471 3.13e-18 88.2
MS.gene69732.t1 MTR_6g008530 23.664 524 319 19 2 488 16 495 3.91e-18 87.8
MS.gene69732.t1 MTR_2g061910 44.554 101 53 1 67 167 56 153 4.45e-18 82.0
MS.gene69732.t1 MTR_5g094540 25.344 509 305 18 1 487 10 465 7.27e-18 87.0
MS.gene69732.t1 MTR_3g057980 22.828 495 335 18 1 487 6 461 7.55e-18 86.7
MS.gene69732.t1 MTR_2g010290 24.319 477 302 18 30 487 64 500 1.25e-17 86.3
MS.gene69732.t1 MTR_8g098565 30.973 226 136 6 267 486 261 472 1.29e-17 86.3
MS.gene69732.t1 MTR_4g113650 23.043 460 276 13 58 489 82 491 1.34e-17 86.3
MS.gene69732.t1 MTR_2g062680 29.557 203 86 4 274 476 24 169 1.76e-17 81.3
MS.gene69732.t1 MTR_5g072980 23.667 469 286 17 50 487 40 467 2.04e-17 85.5
MS.gene69732.t1 MTR_5g072930 23.667 469 286 17 50 487 40 467 2.04e-17 85.5
MS.gene69732.t1 MTR_8g036185 25.180 417 262 16 97 487 91 483 3.14e-17 85.1
MS.gene69732.t1 MTR_4g088195 26.812 276 174 9 228 489 212 473 3.38e-17 84.7
MS.gene69732.t1 MTR_4g071710 23.517 489 282 18 40 487 41 478 4.44e-17 84.3
MS.gene69732.t1 MTR_8g063280 27.966 236 144 6 262 487 246 465 4.98e-17 84.3
MS.gene69732.t1 MTR_2g010280 28.947 190 122 3 298 487 295 471 8.27e-17 83.6
MS.gene69732.t1 MTR_7g012860 23.820 466 300 18 40 487 37 465 1.24e-16 83.2
MS.gene69732.t1 MTR_0287s0060 23.820 466 300 18 40 487 37 465 1.24e-16 83.2
MS.gene69732.t1 MTR_4g088420 29.412 187 114 4 302 488 30 198 2.17e-16 79.3
MS.gene69732.t1 MTR_4g088160 25.362 276 178 9 228 489 212 473 2.18e-16 82.4
MS.gene69732.t1 MTR_2g065360 23.176 466 305 14 40 489 11 439 3.01e-16 81.6
MS.gene69732.t1 MTR_6g008500 22.719 537 325 22 7 494 15 510 3.22e-16 82.0
MS.gene69732.t1 MTR_7g075580 23.707 464 290 18 47 487 45 467 3.83e-16 81.6
MS.gene69732.t1 MTR_7g027960 21.705 516 322 18 1 487 5 467 5.04e-16 81.3
MS.gene69732.t1 MTR_5g470730 23.568 454 286 17 5 434 10 426 5.25e-16 80.9
MS.gene69732.t1 MTR_5g094660 23.821 424 271 13 79 487 78 464 5.83e-16 80.9
MS.gene69732.t1 MTR_0022s0290 23.529 476 299 16 39 487 44 481 5.88e-16 80.9
MS.gene69732.t1 MTR_4g048580 23.679 511 314 16 2 487 6 465 6.17e-16 80.9
MS.gene69732.t1 MTR_3g057900 22.200 500 332 21 2 487 6 462 6.74e-16 80.9
MS.gene69732.t1 MTR_7g079440 25.468 267 176 8 81 331 227 486 8.45e-16 80.5
MS.gene69732.t1 MTR_3g057910 22.103 466 306 13 40 487 42 468 9.65e-16 80.5
MS.gene69732.t1 MTR_5g009110 22.222 351 237 11 80 411 111 444 9.91e-16 80.1
MS.gene69732.t1 MTR_5g094570 22.430 428 273 12 79 487 78 465 1.68e-15 79.7
MS.gene69732.t1 MTR_8g466180 23.576 509 315 19 8 487 3 466 2.04e-15 79.3
MS.gene69732.t1 MTR_4g088170 24.275 276 183 7 228 489 212 475 2.96e-15 79.0
MS.gene69732.t1 MTR_6g022450 22.738 431 299 10 79 497 78 486 4.40e-15 78.2
MS.gene69732.t1 MTR_5g026520 27.799 259 151 9 248 487 235 476 4.44e-15 78.2
MS.gene69732.t1 MTR_5g007450 21.961 510 337 15 2 494 10 475 4.59e-15 78.2
MS.gene69732.t1 MTR_3g058220 21.526 511 332 18 1 487 1 466 5.21e-15 78.2
MS.gene69732.t1 MTR_8g035790 42.308 78 35 1 412 489 1 68 5.21e-15 71.2
MS.gene69732.t1 MTR_6g008600 22.736 519 328 19 2 488 16 493 6.83e-15 77.8
MS.gene69732.t1 MTR_4g018800 22.833 473 313 14 42 488 45 491 6.93e-15 77.8
MS.gene69732.t1 MTR_3g057860 22.289 498 343 12 3 489 5 469 7.14e-15 77.4
MS.gene69732.t1 MTR_1g102390 38.144 97 57 1 43 139 42 135 9.75e-15 71.6
MS.gene69732.t1 MTR_3g057800 22.892 498 336 15 2 487 3 464 1.16e-14 77.0
MS.gene69732.t1 MTR_6g008430 21.627 504 339 19 7 488 15 484 1.70e-14 76.6
MS.gene69732.t1 MTR_5g094840 24.145 468 289 20 40 486 48 470 2.14e-14 76.3
MS.gene69732.t1 MTR_4g062510 28.125 192 121 5 296 487 307 481 2.48e-14 75.9
MS.gene69732.t1 MTR_5g070850 21.643 499 326 16 10 486 13 468 2.78e-14 75.9
MS.gene69732.t1 MTR_5g073250 23.168 505 330 18 1 487 1 465 2.83e-14 75.9
MS.gene69732.t1 MTR_2g073440 25.882 255 156 8 254 497 227 459 3.14e-14 75.5
MS.gene69732.t1 MTR_8g042000 25.633 316 185 11 81 376 109 394 3.17e-14 75.1
MS.gene69732.t1 MTR_6g008640 22.470 494 311 16 30 488 33 489 3.91e-14 75.5
MS.gene69732.t1 MTR_3g057970 22.358 492 331 20 6 487 6 456 5.04e-14 74.7
MS.gene69732.t1 MTR_5g070920 22.047 508 326 17 1 486 8 467 5.27e-14 74.7
MS.gene69732.t1 MTR_2g073480 25.882 255 156 8 254 497 160 392 6.12e-14 73.9
MS.gene69732.t1 MTR_4g077210 23.362 458 284 17 52 487 55 467 7.16e-14 74.3
MS.gene69732.t1 MTR_8g012590 25.581 258 166 8 247 497 237 475 7.23e-14 74.3
MS.gene69732.t1 MTR_2g073420 24.681 235 149 6 260 487 260 473 1.17e-13 73.9
MS.gene69732.t1 MTR_5g095220 22.314 484 289 19 27 487 16 435 1.46e-13 73.2
MS.gene69732.t1 MTR_3g467220 21.822 527 350 23 6 499 18 515 1.51e-13 73.6
MS.gene69732.t1 MTR_5g070700 22.332 506 322 16 5 486 10 468 1.82e-13 73.2
MS.gene69732.t1 MTR_6g042610 23.208 530 321 21 9 497 9 493 1.83e-13 73.2
MS.gene69732.t1 MTR_7g098550 22.042 431 276 14 80 498 98 480 2.44e-13 72.8
MS.gene69732.t1 MTR_1g022040 21.219 443 285 13 75 499 91 487 2.67e-13 72.8
MS.gene69732.t1 MTR_5g045250 23.725 451 286 21 54 487 76 485 3.99e-13 72.0
MS.gene69732.t1 MTR_4g104640 23.542 480 298 18 34 486 44 481 4.07e-13 72.0
MS.gene69732.t1 MTR_3g076530 22.156 501 330 16 4 487 11 468 5.15e-13 71.6
MS.gene69732.t1 MTR_1g035140 22.562 523 310 21 2 489 5 467 5.29e-13 71.6
MS.gene69732.t1 MTR_2g010300 27.513 189 110 4 298 486 295 456 5.47e-13 71.6
MS.gene69732.t1 MTR_7g012330 24.453 503 302 24 10 487 15 464 5.76e-13 71.6
MS.gene69732.t1 MTR_6g035100 24.000 500 315 20 5 487 13 464 8.34e-13 71.2
MS.gene69732.t1 MTR_8g089800 22.594 478 299 20 40 497 44 470 1.85e-12 70.1
MS.gene69732.t1 MTR_3g436390 22.176 478 292 17 40 487 40 467 1.97e-12 70.1
MS.gene69732.t1 MTR_7g098550 21.868 439 275 15 80 498 98 488 2.17e-12 69.7
MS.gene69732.t1 MTR_7g075600 24.104 502 325 15 1 487 7 467 2.50e-12 69.7
MS.gene69732.t1 MTR_5g073230 21.842 467 289 13 40 487 45 454 2.56e-12 69.3
MS.gene69732.t1 MTR_3g058060 22.200 509 312 19 13 487 11 469 3.74e-12 69.3
MS.gene69732.t1 MTR_6g034940 25.121 207 129 6 296 499 284 467 4.32e-12 68.9
MS.gene69732.t1 MTR_5g021390 20.127 472 310 15 40 486 48 477 5.36e-12 68.6
MS.gene69732.t1 MTR_5g018980 22.973 444 280 15 79 494 75 484 7.83e-12 68.2
MS.gene69732.t1 MTR_3g058250 21.457 508 336 16 1 487 1 466 1.09e-11 67.4
MS.gene69732.t1 MTR_3g467290 19.291 508 358 16 3 487 20 498 1.16e-11 67.4
MS.gene69732.t1 MTR_5g056720 25.792 221 125 7 302 516 227 414 1.45e-11 67.0
MS.gene69732.t1 MTR_6g008620 22.353 255 170 6 244 488 255 491 1.71e-11 67.0
MS.gene69732.t1 MTR_8g077810 22.086 489 334 18 35 515 29 478 2.31e-11 66.6
MS.gene69732.t1 MTR_1g091023 22.822 241 159 6 253 487 241 460 2.40e-11 66.6
MS.gene69732.t1 MTR_2g010530 22.275 422 280 13 79 487 73 459 3.68e-11 65.9
MS.gene69732.t1 MTR_5g092150 21.277 376 248 10 123 492 115 448 4.11e-11 65.5
MS.gene69732.t1 MTR_4g095050 22.790 509 336 17 2 495 4 470 4.16e-11 65.9
MS.gene69732.t1 MTR_2g055430 25.704 284 177 11 80 346 102 368 4.97e-11 65.1
MS.gene69732.t1 MTR_8g046240 22.441 508 320 19 7 487 11 471 5.42e-11 65.5
MS.gene69732.t1 MTR_5g009110 22.115 312 208 10 119 411 1 296 5.96e-11 64.3
MS.gene69732.t1 MTR_4g025980 23.093 472 295 18 40 487 34 461 6.36e-11 65.1
MS.gene69732.t1 MTR_8g020950 23.382 479 291 15 40 489 42 473 6.40e-11 65.1
MS.gene69732.t1 MTR_1g091010 22.407 241 160 6 253 487 240 459 7.07e-11 65.1
MS.gene69732.t1 MTR_3g024520 22.551 439 273 14 79 487 70 471 8.58e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69732.t1 AT3G48520 58.301 518 196 5 1 517 1 499 0.0 600
MS.gene69732.t1 AT5G63450 58.513 511 197 4 10 519 8 504 0.0 588
MS.gene69732.t1 AT5G63450 58.513 511 197 4 10 519 66 562 0.0 588
MS.gene69732.t1 AT3G01900 55.052 485 199 4 33 517 25 490 0.0 548
MS.gene69732.t1 AT3G56630 43.918 485 244 8 42 517 33 498 7.68e-138 408
MS.gene69732.t1 AT1G34540 42.797 479 257 5 42 517 33 497 5.55e-136 403
MS.gene69732.t1 AT2G27690 42.706 473 243 8 51 517 44 494 1.67e-126 379
MS.gene69732.t1 AT5G08250 38.664 494 269 8 41 517 2 478 1.47e-111 340
MS.gene69732.t1 AT5G08250 38.664 494 269 8 41 517 64 540 5.17e-111 341
MS.gene69732.t1 AT5G23190 41.441 444 237 6 85 517 109 540 2.05e-110 340
MS.gene69732.t1 AT1G24540 37.602 492 279 7 40 517 43 520 8.99e-108 332
MS.gene69732.t1 AT2G45510 36.994 519 285 12 6 512 15 503 4.63e-105 324
MS.gene69732.t1 AT1G63710 37.805 492 278 11 40 517 30 507 2.21e-103 320
MS.gene69732.t1 AT2G44890 37.476 515 292 12 9 512 8 503 8.09e-103 318
MS.gene69732.t1 AT3G26125 37.278 507 269 14 40 517 46 532 2.74e-102 318
MS.gene69732.t1 AT1G13140 37.525 493 279 11 40 517 46 524 4.82e-102 317
MS.gene69732.t1 AT2G45970 37.959 490 283 10 40 517 30 510 4.47e-101 315
MS.gene69732.t1 AT1G69500 35.922 515 274 11 40 517 28 523 3.88e-99 310
MS.gene69732.t1 AT2G23180 33.966 527 304 10 9 517 12 512 2.41e-96 302
MS.gene69732.t1 AT4G00360 34.818 494 294 11 40 517 30 511 2.78e-96 303
MS.gene69732.t1 AT2G44890 36.381 514 281 13 9 512 8 485 4.65e-96 300
MS.gene69732.t1 AT5G58860 35.294 493 287 7 40 517 33 508 5.73e-95 298
MS.gene69732.t1 AT1G13140 36.100 482 275 10 40 517 46 498 2.55e-93 294
MS.gene69732.t1 AT1G13150 35.471 499 291 10 35 517 34 517 1.69e-92 292
MS.gene69732.t1 AT1G01600 33.735 498 304 8 40 521 30 517 1.03e-91 291
MS.gene69732.t1 AT4G39490 33.704 540 311 15 1 517 1 516 1.32e-89 285
MS.gene69732.t1 AT4G39480 35.491 479 274 11 58 517 51 513 3.65e-89 283
MS.gene69732.t1 AT5G52320 33.600 500 293 10 32 516 26 501 8.14e-89 282
MS.gene69732.t1 AT5G52320 33.401 494 290 10 32 510 26 495 1.89e-87 278
MS.gene69732.t1 AT2G21910 32.996 494 298 9 39 517 31 506 8.42e-87 277
MS.gene69732.t1 AT1G65340 32.535 501 298 9 32 516 26 502 1.71e-86 276
MS.gene69732.t1 AT1G57750 30.320 531 321 11 1 518 3 497 4.26e-79 256
MS.gene69732.t1 AT4G39510 31.976 491 300 8 42 517 34 505 4.29e-77 251
MS.gene69732.t1 AT4G32170 31.301 492 304 10 40 517 32 503 7.77e-77 251
MS.gene69732.t1 AT1G47620 31.120 527 328 9 10 520 11 518 9.13e-77 251
MS.gene69732.t1 AT4G39500 30.830 506 307 9 33 517 33 516 1.42e-75 248
MS.gene69732.t1 AT4G39500 31.106 479 290 8 57 517 10 466 2.31e-73 241
MS.gene69732.t1 AT1G57750 30.635 457 277 10 1 444 3 432 2.75e-66 221
MS.gene69732.t1 AT5G02900 30.277 469 267 14 42 491 25 452 2.59e-63 214
MS.gene69732.t1 AT3G53130 26.000 450 293 13 81 517 117 539 1.42e-32 131
MS.gene69732.t1 AT1G31800 24.449 454 300 15 80 519 147 571 6.18e-30 124
MS.gene69732.t1 AT3G14640 25.225 444 257 15 80 496 100 495 2.48e-27 115
MS.gene69732.t1 AT3G14640 25.450 444 256 15 80 496 122 517 3.37e-27 115
MS.gene69732.t1 AT3G48300 21.967 478 312 13 24 487 21 451 1.24e-25 110
MS.gene69732.t1 AT3G48300 21.967 478 312 13 24 487 23 453 1.26e-25 110
MS.gene69732.t1 AT5G52400 27.949 390 237 15 108 488 136 490 4.57e-25 108
MS.gene69732.t1 AT5G24900 25.926 432 253 15 81 486 106 496 4.83e-25 108
MS.gene69732.t1 AT3G14680 24.070 457 282 16 80 516 100 511 5.71e-25 108
MS.gene69732.t1 AT5G24900 26.253 419 242 15 94 486 2 379 2.09e-24 105
MS.gene69732.t1 AT3G48270 22.814 469 297 12 39 489 34 455 1.92e-23 103
MS.gene69732.t1 AT5G24910 24.781 456 255 16 81 498 110 515 4.93e-23 103
MS.gene69732.t1 AT3G48280 23.137 510 311 17 1 487 2 453 1.76e-22 100
MS.gene69732.t1 AT3G14690 24.533 428 261 12 109 516 161 546 2.46e-22 100
MS.gene69732.t1 AT3G14690 24.476 429 260 13 109 516 126 511 4.02e-22 100
MS.gene69732.t1 AT3G48310 22.766 470 303 17 35 489 32 456 8.29e-22 99.0
MS.gene69732.t1 AT3G14660 23.333 450 284 12 85 516 105 511 1.14e-21 98.6
MS.gene69732.t1 AT2G26710 23.556 450 275 13 58 486 83 484 2.37e-21 97.8
MS.gene69732.t1 AT3G14650 23.744 438 275 13 80 499 100 496 3.34e-21 97.4
MS.gene69732.t1 AT4G15110 21.460 452 291 16 80 488 118 548 7.90e-21 96.7
MS.gene69732.t1 AT5G38450 25.169 445 277 14 58 486 81 485 1.07e-20 95.9
MS.gene69732.t1 AT3G14620 22.993 461 291 14 59 496 77 496 1.28e-20 95.5
MS.gene69732.t1 AT4G13310 24.101 473 295 15 40 489 33 464 2.07e-20 94.7
MS.gene69732.t1 AT3G48290 23.110 463 299 12 39 487 36 455 2.34e-20 94.7
MS.gene69732.t1 AT4G13290 23.941 472 289 16 40 489 34 457 5.01e-20 93.6
MS.gene69732.t1 AT3G14630 23.904 456 282 14 81 516 97 507 9.10e-20 92.8
MS.gene69732.t1 AT3G25180 24.074 378 255 11 128 497 130 483 1.90e-19 92.0
MS.gene69732.t1 AT3G14610 24.565 460 277 16 80 516 99 511 1.98e-19 92.0
MS.gene69732.t1 AT3G14630 23.894 452 279 14 85 516 156 562 2.01e-19 92.0
MS.gene69732.t1 AT5G24950 23.729 472 297 17 40 489 33 463 2.12e-19 91.7
MS.gene69732.t1 AT4G27710 25.115 434 251 15 81 488 103 488 4.31e-19 90.9
MS.gene69732.t1 AT2G30770 23.690 477 302 17 34 489 28 463 5.93e-19 90.1
MS.gene69732.t1 AT5G25120 23.969 509 314 20 1 487 1 458 1.42e-18 89.0
MS.gene69732.t1 AT3G14660 26.736 288 177 7 239 516 102 365 5.27e-18 86.3
MS.gene69732.t1 AT5G06905 23.462 520 354 19 5 509 8 498 6.87e-18 87.0
MS.gene69732.t1 AT3G10560 23.431 478 313 18 27 487 38 479 8.09e-18 87.0
MS.gene69732.t1 AT2G46950 25.735 408 253 12 94 488 171 541 8.51e-18 87.0
MS.gene69732.t1 AT1G64940 27.363 201 126 4 292 492 301 481 1.51e-17 85.9
MS.gene69732.t1 AT3G48290 23.663 486 294 15 39 487 36 481 1.62e-17 85.9
MS.gene69732.t1 AT4G37340 23.092 511 309 21 1 487 6 456 5.52e-17 84.3
MS.gene69732.t1 AT3G03470 22.465 503 337 14 40 517 35 509 7.62e-17 84.0
MS.gene69732.t1 AT2G46960 23.333 450 280 14 58 486 80 485 1.00e-16 83.6
MS.gene69732.t1 AT3G61040 27.126 247 148 7 250 487 238 461 1.09e-16 83.2
MS.gene69732.t1 AT1G64930 26.866 201 129 4 292 492 299 481 1.76e-16 82.8
MS.gene69732.t1 AT5G25130 23.228 508 319 17 1 487 1 458 2.56e-16 82.0
MS.gene69732.t1 AT5G06900 24.048 499 323 18 7 489 6 464 3.03e-16 82.0
MS.gene69732.t1 AT2G45560 22.555 501 326 15 10 487 11 472 3.95e-16 81.6
MS.gene69732.t1 AT2G24180 22.016 486 320 18 40 505 40 486 4.43e-16 81.3
MS.gene69732.t1 AT5G05260 23.629 474 316 18 40 491 44 493 5.81e-16 81.3
MS.gene69732.t1 AT1G11610 24.101 473 289 16 40 487 34 461 7.50e-16 80.9
MS.gene69732.t1 AT3G48320 21.600 500 326 13 1 487 8 454 9.03e-16 80.5
MS.gene69732.t1 AT3G28740 24.390 369 235 13 128 487 131 464 9.25e-16 80.5
MS.gene69732.t1 AT1G11610 24.101 473 289 16 40 487 34 461 9.66e-16 80.5
MS.gene69732.t1 AT2G12190 25.692 253 155 5 257 492 246 482 1.07e-15 80.1
MS.gene69732.t1 AT2G46660 23.983 467 298 23 40 490 74 499 1.15e-15 80.1
MS.gene69732.t1 AT2G22330 22.691 498 334 15 9 487 36 501 1.48e-15 80.1
MS.gene69732.t1 AT1G16410 22.081 471 318 13 40 486 49 494 1.94e-15 79.7
MS.gene69732.t1 AT2G22330 22.691 498 334 15 9 487 59 524 2.24e-15 79.3
MS.gene69732.t1 AT1G67110 25.132 378 236 8 118 486 140 479 3.20e-15 79.0
MS.gene69732.t1 AT5G05260 23.291 468 293 15 40 491 44 461 3.53e-15 78.6
MS.gene69732.t1 AT2G46960 23.573 403 245 13 105 486 9 369 4.67e-15 77.8
MS.gene69732.t1 AT1G01190 22.574 474 295 19 40 490 77 501 4.83e-15 78.2
MS.gene69732.t1 AT1G01190 22.574 474 295 19 40 490 82 506 5.06e-15 78.2
MS.gene69732.t1 AT5G09970 22.664 503 335 21 5 487 35 503 5.73e-15 78.2
MS.gene69732.t1 AT4G39950 22.289 498 336 15 8 486 33 498 9.08e-15 77.4
MS.gene69732.t1 AT4G39950 22.289 498 336 15 8 486 73 538 1.13e-14 77.4
MS.gene69732.t1 AT1G75130 23.904 502 302 22 31 498 31 486 1.15e-14 77.0
MS.gene69732.t1 AT3G26310 22.355 501 324 20 7 487 6 461 1.38e-14 76.6
MS.gene69732.t1 AT1G64950 25.296 253 154 5 257 492 246 480 1.69e-14 76.6
MS.gene69732.t1 AT5G42590 21.921 479 327 14 37 499 30 477 1.75e-14 76.3
MS.gene69732.t1 AT3G61880 22.458 472 319 21 29 487 59 496 2.64e-14 75.9
MS.gene69732.t1 AT4G37430 20.875 503 338 17 2 487 1 460 2.70e-14 75.9
MS.gene69732.t1 AT3G61880 22.458 472 319 21 29 487 59 496 4.44e-14 75.5
MS.gene69732.t1 AT5G04330 22.340 470 305 15 40 486 36 468 4.57e-14 75.1
MS.gene69732.t1 AT1G19630 23.881 268 175 6 256 518 233 476 4.67e-14 75.1
MS.gene69732.t1 AT1G33720 21.042 499 342 16 5 487 10 472 4.89e-14 75.1
MS.gene69732.t1 AT3G26300 21.862 494 336 17 7 487 6 462 5.72e-14 74.7
MS.gene69732.t1 AT2G30750 23.045 486 308 17 27 489 21 463 1.09e-13 73.9
MS.gene69732.t1 AT5G57260 20.487 493 343 13 39 517 33 490 1.20e-13 73.9
MS.gene69732.t1 AT2G25160 24.105 531 320 23 2 494 3 488 1.55e-13 73.6
MS.gene69732.t1 AT1G33720 24.779 226 144 5 265 487 138 340 3.42e-13 71.6
MS.gene69732.t1 AT1G33720 24.779 226 144 5 265 487 138 340 3.42e-13 71.6
MS.gene69732.t1 AT1G33720 24.779 226 144 5 265 487 138 340 3.42e-13 71.6
MS.gene69732.t1 AT4G37410 21.782 505 338 19 2 492 1 462 5.89e-13 71.6
MS.gene69732.t1 AT1G16400 25.098 255 160 6 244 486 258 493 9.87e-13 70.9
MS.gene69732.t1 AT1G01280 22.273 440 275 14 79 487 70 473 2.54e-12 69.7
MS.gene69732.t1 AT2G40890 25.000 232 149 4 299 525 292 503 2.97e-12 69.3
MS.gene69732.t1 AT5G25180 22.056 467 304 15 40 487 33 458 2.99e-12 69.3
MS.gene69732.t1 AT4G31970 24.579 297 186 11 244 523 247 522 3.68e-12 69.3
MS.gene69732.t1 AT4G37360 23.307 502 313 17 3 487 10 456 4.76e-12 68.9
MS.gene69732.t1 AT5G24960 21.622 481 310 14 33 489 27 464 4.91e-12 68.6
MS.gene69732.t1 AT4G36220 25.112 223 135 7 266 486 287 479 7.32e-12 68.2
MS.gene69732.t1 AT5G67310 21.786 459 311 14 40 487 46 467 7.85e-12 68.2
MS.gene69732.t1 AT4G22690 22.664 428 276 13 80 487 124 516 8.23e-12 68.2
MS.gene69732.t1 AT1G19630 24.889 225 140 6 256 475 233 433 8.51e-12 67.8
MS.gene69732.t1 AT3G20940 22.594 478 300 16 39 489 45 479 1.04e-11 67.8
MS.gene69732.t1 AT4G22710 22.512 422 284 12 80 487 93 485 1.12e-11 67.8
MS.gene69732.t1 AT1G66540 23.118 372 233 13 131 487 10 343 1.24e-11 67.0
MS.gene69732.t1 AT5G35715 20.924 368 262 8 128 487 55 401 1.47e-11 67.0
MS.gene69732.t1 AT3G53280 22.747 466 306 16 40 487 32 461 1.54e-11 67.0
MS.gene69732.t1 AT4G37310 23.047 512 314 20 6 487 7 468 1.56e-11 67.0
MS.gene69732.t1 AT3G26210 22.043 372 252 12 128 487 120 465 1.75e-11 67.0
MS.gene69732.t1 AT3G26290 21.667 480 316 16 27 487 24 462 1.89e-11 67.0
MS.gene69732.t1 AT3G26290 21.667 480 316 16 27 487 37 475 2.64e-11 66.6
MS.gene69732.t1 AT3G20950 23.848 499 331 19 10 489 14 482 3.40e-11 66.2
MS.gene69732.t1 AT3G20935 25.532 188 122 5 303 489 134 304 3.47e-11 65.5
MS.gene69732.t1 AT4G37400 21.569 510 333 17 2 492 1 462 4.11e-11 65.9
MS.gene69732.t1 AT4G37320 21.176 510 322 19 2 487 3 456 4.67e-11 65.5
MS.gene69732.t1 AT5G10600 22.782 496 330 19 3 487 21 474 5.13e-11 65.5
MS.gene69732.t1 AT2G27010 24.701 251 161 8 246 487 221 452 6.06e-11 65.1
MS.gene69732.t1 AT4G15350 24.201 219 140 6 278 487 269 470 6.59e-11 65.1
MS.gene69732.t1 AT1G19630 28.289 152 96 4 256 402 233 376 6.68e-11 65.1
MS.gene69732.t1 AT3G26230 21.176 510 330 17 8 489 1 466 8.46e-11 64.7

Find 131 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAATGACGTGGCTTCTT+TGG 0.190026 3.4:+76934736 MS.gene69732:CDS
TTTAGGGAAGTTGGTGAAAT+TGG 0.235193 3.4:-76934097 None:intergenic
CAAGAGGAATTGATAGTAAA+AGG 0.261237 3.4:+76934780 MS.gene69732:CDS
TTGCTTGAATTAGCTTCTAA+TGG 0.266311 3.4:+76934294 MS.gene69732:CDS
TGGAACGTATGGCCGCAAAA+TGG 0.284925 3.4:+76935358 MS.gene69732:CDS
TTCTGAACCAATTTGAAATT+AGG 0.289436 3.4:+76935243 MS.gene69732:CDS
TGGCTATGATCCTTGTTGTT+TGG 0.310845 3.4:+76934386 MS.gene69732:CDS
AATCAGTGAACGAGATAATA+AGG 0.325511 3.4:+76934571 MS.gene69732:CDS
TGGGGAGGATGGAGGCCCTA+TGG 0.339724 3.4:+76935033 MS.gene69732:CDS
ATTCACCGATTCATTTGATT+TGG 0.345150 3.4:+76934481 MS.gene69732:CDS
ATACAGGCCTAATTTCAAAT+TGG 0.345276 3.4:-76935250 None:intergenic
TGAATATGCCGCAACCTAAA+AGG 0.349199 3.4:-76934149 None:intergenic
TGGTCAAAACAACGTAAAAT+AGG 0.356556 3.4:+76934189 MS.gene69732:CDS
ATGAAGGAGGGGTGTGAGTA+GGG 0.365515 3.4:-76933903 None:intergenic
ATCATTGTTGGCGGCATGCT+TGG 0.372540 3.4:-76934949 None:intergenic
TTATTACCTCCTTCTCCGTT+TGG 0.373119 3.4:-76935101 None:intergenic
GTCCACAAAAGAGTTCAAAA+TGG 0.376346 3.4:+76935338 MS.gene69732:CDS
GAGACCTTGTTGTAAATTCA+TGG 0.376773 3.4:-76934215 None:intergenic
GGGTTGTGAAGTGTGAAATA+TGG 0.386977 3.4:-76933882 None:intergenic
ATGTGTTGCCGGACGGAACT+AGG 0.390227 3.4:+76934970 MS.gene69732:CDS
TTTCTTACGGCTTATATGGC+TGG 0.398987 3.4:+76935299 MS.gene69732:CDS
GCCTGTATCTATTGACCAAC+CGG 0.407542 3.4:+76935265 MS.gene69732:CDS
ACTATCAATTCCTCTTGGCT+TGG 0.414384 3.4:-76934774 None:intergenic
CCTCCTTCATACCCCATCAT+AGG 0.427095 3.4:+76933916 MS.gene69732:CDS
TGCGGCATATTCAATGTAGA+TGG 0.439908 3.4:+76934159 MS.gene69732:CDS
TGAGATAAGGCAACCTATGA+TGG 0.439954 3.4:-76933929 None:intergenic
GCCATATAAGCCGTAAGAAA+AGG 0.445292 3.4:-76935296 None:intergenic
GGAACGTATGGCCGCAAAAT+GGG 0.445591 3.4:+76935359 MS.gene69732:CDS
CGCCAACAATGATGTGTTGC+CGG 0.445745 3.4:+76934959 MS.gene69732:CDS
GGGGAGGATGGAGGCCCTAT+GGG 0.456336 3.4:+76935034 MS.gene69732:CDS
GTCCGGCAACACATCATTGT+TGG 0.456658 3.4:-76934961 None:intergenic
AGTGAAAGAAATAATGTTAG+TGG 0.459504 3.4:+76934612 MS.gene69732:CDS
GGATTGTTTGAGTTGGAGAT+TGG 0.460295 3.4:-76934002 None:intergenic
TCCTTATGGGATGGGGAGGA+TGG 0.462401 3.4:+76935022 MS.gene69732:CDS
CCCAAGACAGACTCTTGGAC+CGG 0.464123 3.4:-76935177 None:intergenic
TATGAAGGAGGGGTGTGAGT+AGG 0.468082 3.4:-76933904 None:intergenic
GTTGTATCCACCGGTGGCGT+GGG 0.469782 3.4:+76934923 MS.gene69732:CDS
ATCTTCCAAATCAAATGAAT+CGG 0.475185 3.4:-76934486 None:intergenic
TGATTTGTTGACAAAGTTGT+TGG 0.479366 3.4:+76934638 MS.gene69732:CDS
GGTTCATCAAACCACCGCTC+TGG 0.480613 3.4:-76935080 None:intergenic
AGGCCCTATGGGGTAAAGAT+TGG 0.481535 3.4:+76935045 MS.gene69732:CDS
GAGAGGGTTGGCGGTTATGA+TGG 0.481620 3.4:-76934052 None:intergenic
GATTGTTTGAGTTGGAGATT+GGG 0.483049 3.4:-76934001 None:intergenic
GGTGAGTGTAGAAATCTAGA+AGG 0.485583 3.4:-76933972 None:intergenic
ACCGGTTGGTCAATAGATAC+AGG 0.486135 3.4:-76935266 None:intergenic
GGTTGGCGGTTATGATGGTT+CGG 0.489026 3.4:-76934047 None:intergenic
TCTTTCCCAAGACAGACTCT+TGG 0.491988 3.4:-76935182 None:intergenic
TCCATCCTCCCCATCCCATA+AGG 0.493189 3.4:-76935023 None:intergenic
AATTTCACCAACTTCCCTAA+AGG 0.493898 3.4:+76934099 MS.gene69732:CDS
TAGAAGCTAATTCAAGCAAT+GGG 0.496987 3.4:-76934290 None:intergenic
TTCTCTTGAAGAGAAGGAAG+AGG 0.497147 3.4:-76933834 None:intergenic
TTCGACATTGAGAGGGTTGG+CGG 0.498527 3.4:-76934061 None:intergenic
CCGGTCCAAGAGTCTGTCTT+GGG 0.499909 3.4:+76935177 MS.gene69732:CDS
CATTCCAATCTTTACCCCAT+AGG 0.501351 3.4:-76935049 None:intergenic
TGAAATCATGGTGAGAGATA+TGG 0.509926 3.4:+76934674 MS.gene69732:CDS
GAGTTGGAGATTGGGAGAGA+AGG 0.510263 3.4:-76933993 None:intergenic
GCGCGCCGAGGCGGTTGATG+AGG 0.510855 3.4:-76934023 None:intergenic
GGTTGTATCCACCGGTGGCG+TGG 0.510914 3.4:+76934922 MS.gene69732:CDS
CTTACGGCTTATATGGCTGG+TGG 0.513738 3.4:+76935302 MS.gene69732:CDS
CAACCTATGATGGGGTATGA+AGG 0.520012 3.4:-76933919 None:intergenic
CGAGCGTATTGCACTTATCT+CGG 0.520238 3.4:-76934457 None:intergenic
GTCAATGAGGTTGTATCCAC+CGG 0.522300 3.4:+76934914 MS.gene69732:CDS
ATCAAGAGGGTGCTTAATGT+AGG 0.522695 3.4:+76934507 MS.gene69732:CDS
ATTCCAATCTTTACCCCATA+GGG 0.522750 3.4:-76935048 None:intergenic
GAGATAAGGCAACCTATGAT+GGG 0.525952 3.4:-76933928 None:intergenic
TTGATGAGGATTGTTTGAGT+TGG 0.526092 3.4:-76934009 None:intergenic
AGAGTTCAAAATGGAACGTA+TGG 0.527586 3.4:+76935347 MS.gene69732:CDS
GCCGGTCCAAGAGTCTGTCT+TGG 0.527649 3.4:+76935176 MS.gene69732:CDS
TGCTTGGAATCCCACGCCAC+CGG 0.531138 3.4:-76934933 None:intergenic
TTACGGCTTATATGGCTGGT+GGG 0.532263 3.4:+76935303 MS.gene69732:CDS
CCTATGATGGGGTATGAAGG+AGG 0.532715 3.4:-76933916 None:intergenic
GACGGAACTAGGGTTGGAAA+AGG 0.534176 3.4:+76934981 MS.gene69732:CDS
GTATTATTCTCTTGAAGAGA+AGG 0.534368 3.4:-76933840 None:intergenic
TGACAAAGTTGTTGGAAGGA+GGG 0.534427 3.4:+76934646 MS.gene69732:CDS
ATTGATAGTAAAAGGAGTGA+GGG 0.534790 3.4:+76934788 MS.gene69732:CDS
AAGGAGGTAATAATAACGAC+GGG 0.535915 3.4:+76935111 MS.gene69732:CDS
TTGACAAAGTTGTTGGAAGG+AGG 0.537337 3.4:+76934645 MS.gene69732:CDS
AGGATGTATTCGACATTGAG+AGG 0.544989 3.4:-76934069 None:intergenic
TTAGAAGCTAATTCAAGCAA+TGG 0.545493 3.4:-76934291 None:intergenic
GCCGACAAAAGTGGTGGCAA+AGG 0.545526 3.4:-76934420 None:intergenic
TTATGGGATGGGGAGGATGG+AGG 0.547320 3.4:+76935025 MS.gene69732:CDS
GTGAAAGAAATAATGTTAGT+GGG 0.548453 3.4:+76934613 MS.gene69732:CDS
TCGCTAAGAATTTCAGTGAA+GGG 0.548678 3.4:-76934126 None:intergenic
CTATGATGGGGTATGAAGGA+GGG 0.550443 3.4:-76933915 None:intergenic
TTTCCAACCCTAGTTCCGTC+CGG 0.551868 3.4:-76934978 None:intergenic
AATTGATAGTAAAAGGAGTG+AGG 0.554403 3.4:+76934787 MS.gene69732:CDS
GGGAGGATGGAGGCCCTATG+GGG 0.554449 3.4:+76935035 MS.gene69732:CDS
TGAAGGAGGGGTGTGAGTAG+GGG 0.558526 3.4:-76933902 None:intergenic
TGGTTCGGCGCGCGCCGAGG+CGG 0.560416 3.4:-76934032 None:intergenic
CGACGTCGGCGGCAATGACG+TGG 0.561968 3.4:+76934727 MS.gene69732:CDS
CATCTTGCATGTCAATAACA+TGG 0.564610 3.4:-76934320 None:intergenic
TATTCAAATGGAATATGTCG+TGG 0.564798 3.4:+76935214 MS.gene69732:CDS
GTATTCGACATTGAGAGGGT+TGG 0.566083 3.4:-76934064 None:intergenic
TGATGGTTCGGCGCGCGCCG+AGG 0.570570 3.4:-76934035 None:intergenic
TCAAGAGGGTGCTTAATGTA+GGG 0.570846 3.4:+76934508 MS.gene69732:CDS
ATTTGATTTGGAAGATCAAG+AGG 0.571670 3.4:+76934493 MS.gene69732:CDS
TGGCCGCAAAATGGGAGCAT+AGG 0.573339 3.4:+76935367 MS.gene69732:CDS
TTGCCGGACGGAACTAGGGT+TGG 0.573574 3.4:+76934975 MS.gene69732:CDS
TTGTCGAACGCCGACAAAAG+TGG 0.574998 3.4:-76934429 None:intergenic
AACAATGATGTGTTGCCGGA+CGG 0.575536 3.4:+76934963 MS.gene69732:CDS
AGGAGGGCATGATGAAATCA+TGG 0.577588 3.4:+76934662 MS.gene69732:CDS
CTTGTTTGTGTGAGTCAATG+AGG 0.578710 3.4:+76934901 MS.gene69732:CDS
CGGCAACACATCATTGTTGG+CGG 0.585858 3.4:-76934958 None:intergenic
GTCGCTAAGAATTTCAGTGA+AGG 0.589215 3.4:-76934127 None:intergenic
TCAATGTAGATGGAAAGTTA+TGG 0.589687 3.4:+76934169 MS.gene69732:CDS
TGTGTTGCCGGACGGAACTA+GGG 0.594214 3.4:+76934971 MS.gene69732:CDS
TTTGATGAACCAAACGGAGA+AGG 0.596973 3.4:+76935092 MS.gene69732:CDS
CGGTGGTTTGATGAACCAAA+CGG 0.600283 3.4:+76935086 MS.gene69732:CDS
GGATGTATTCGACATTGAGA+GGG 0.602263 3.4:-76934068 None:intergenic
TTGTTGACAAAGTTGTTGGA+AGG 0.603881 3.4:+76934642 MS.gene69732:CDS
TATGATGGGGTATGAAGGAG+GGG 0.610983 3.4:-76933914 None:intergenic
GTCAAATAATCCAAGCCAAG+AGG 0.618489 3.4:+76934764 MS.gene69732:CDS
ACAATCCTCATCAACCGCCT+CGG 0.621473 3.4:+76934018 MS.gene69732:CDS
TGTAGAAATCTAGAAGGCGG+TGG 0.623230 3.4:-76933966 None:intergenic
GATGAACCAAACGGAGAAGG+AGG 0.626691 3.4:+76935095 MS.gene69732:CDS
AGGGAGAGACACGACGTCGG+CGG 0.628276 3.4:+76934716 MS.gene69732:CDS
TTGGAATCCCACGCCACCGG+TGG 0.637881 3.4:-76934930 None:intergenic
TTTGATTTGGAAGATCAAGA+GGG 0.646922 3.4:+76934494 MS.gene69732:CDS
ATTGTGTGTAAAGTTTCACT+TGG 0.649353 3.4:+76934366 MS.gene69732:CDS
AATGAGGTTGTATCCACCGG+TGG 0.662596 3.4:+76934917 MS.gene69732:CDS
ATGAGTTTAAACCAGAGCGG+TGG 0.665689 3.4:+76935069 MS.gene69732:CDS
AGATAAGGCAACCTATGATG+GGG 0.673442 3.4:-76933927 None:intergenic
GAAGGAGGTAATAATAACGA+CGG 0.673705 3.4:+76935110 MS.gene69732:CDS
TCGAACGCCGACAAAAGTGG+TGG 0.689516 3.4:-76934426 None:intergenic
GAGTGTAGAAATCTAGAAGG+CGG 0.696130 3.4:-76933969 None:intergenic
GGCAGGGAGAGACACGACGT+CGG 0.719660 3.4:+76934713 MS.gene69732:CDS
AGTCTGTCTTGGGAAAGACA+TGG 0.721405 3.4:+76935187 MS.gene69732:CDS
GGAATGAGTTTAAACCAGAG+CGG 0.732383 3.4:+76935066 MS.gene69732:CDS
TTAGATAAATCCAAACAACA+AGG 0.735335 3.4:-76934396 None:intergenic
GCAGCCATGAATTTACAACA+AGG 0.754647 3.4:+76934211 MS.gene69732:CDS
AGGAGGTAATAATAACGACG+GGG 0.780838 3.4:+76935112 MS.gene69732:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGGTTATTAGTTTTATCA+TGG + chr3.4:76934692-76934711 MS.gene69732:CDS 20.0%
! AGTGAAAGAAATAATGTTAG+TGG + chr3.4:76934612-76934631 MS.gene69732:CDS 25.0%
! ATCTTCCAAATCAAATGAAT+CGG - chr3.4:76934489-76934508 None:intergenic 25.0%
! GTGAAAGAAATAATGTTAGT+GGG + chr3.4:76934613-76934632 MS.gene69732:CDS 25.0%
! TTAGATAAATCCAAACAACA+AGG - chr3.4:76934399-76934418 None:intergenic 25.0%
!! AAGTGTGAAATATGGTTTTT+GGG - chr3.4:76933877-76933896 None:intergenic 25.0%
!! TTCTGAACCAATTTGAAATT+AGG + chr3.4:76935243-76935262 MS.gene69732:CDS 25.0%
!!! ATGAGATCTTTTGATTATGA+AGG + chr3.4:76934852-76934871 MS.gene69732:CDS 25.0%
!!! TGTTTTTGTAGAATGAGATA+AGG - chr3.4:76933945-76933964 None:intergenic 25.0%
!!! TTATTAGTTTTATCATGGCA+GGG + chr3.4:76934697-76934716 MS.gene69732:CDS 25.0%
AATCAGTGAACGAGATAATA+AGG + chr3.4:76934571-76934590 MS.gene69732:CDS 30.0%
ATACAGGCCTAATTTCAAAT+TGG - chr3.4:76935253-76935272 None:intergenic 30.0%
ATTGTGTGTAAAGTTTCACT+TGG + chr3.4:76934366-76934385 MS.gene69732:CDS 30.0%
GAAAAACCGAAAACTTGTAA+GGG - chr3.4:76935154-76935173 None:intergenic 30.0%
GTAAGAAAAGGAACAAAAAC+CGG - chr3.4:76935287-76935306 None:intergenic 30.0%
GTATTATTCTCTTGAAGAGA+AGG - chr3.4:76933843-76933862 None:intergenic 30.0%
TAGAAGCTAATTCAAGCAAT+GGG - chr3.4:76934293-76934312 None:intergenic 30.0%
TATTCAAATGGAATATGTCG+TGG + chr3.4:76935214-76935233 MS.gene69732:CDS 30.0%
TCAATGTAGATGGAAAGTTA+TGG + chr3.4:76934169-76934188 MS.gene69732:CDS 30.0%
TGAAAAACCGAAAACTTGTA+AGG - chr3.4:76935155-76935174 None:intergenic 30.0%
TGGTCAAAACAACGTAAAAT+AGG + chr3.4:76934189-76934208 MS.gene69732:CDS 30.0%
TTAGAAGCTAATTCAAGCAA+TGG - chr3.4:76934294-76934313 None:intergenic 30.0%
! AATTGATAGTAAAAGGAGTG+AGG + chr3.4:76934787-76934806 MS.gene69732:CDS 30.0%
! AGACATGGCTTTTATTCAAA+TGG + chr3.4:76935202-76935221 MS.gene69732:CDS 30.0%
! ATTGATAGTAAAAGGAGTGA+GGG + chr3.4:76934788-76934807 MS.gene69732:CDS 30.0%
! CAAGAGGAATTGATAGTAAA+AGG + chr3.4:76934780-76934799 MS.gene69732:CDS 30.0%
! CTTTTACTATCAATTCCTCT+TGG - chr3.4:76934782-76934801 None:intergenic 30.0%
! GAAGTGTGAAATATGGTTTT+TGG - chr3.4:76933878-76933897 None:intergenic 30.0%
! GGTTTTTGTTCCTTTTCTTA+CGG + chr3.4:76935286-76935305 MS.gene69732:CDS 30.0%
! TTCCATTTTGAACTCTTTTG+TGG - chr3.4:76935343-76935362 None:intergenic 30.0%
! TTGCTTGAATTAGCTTCTAA+TGG + chr3.4:76934294-76934313 MS.gene69732:CDS 30.0%
!! ACTTATTTTCCTTATGGGAT+GGG + chr3.4:76935014-76935033 MS.gene69732:CDS 30.0%
!! AGAGTGACTTATTTTCCTTA+TGG + chr3.4:76935008-76935027 MS.gene69732:CDS 30.0%
!! ATTCACCGATTCATTTGATT+TGG + chr3.4:76934481-76934500 MS.gene69732:CDS 30.0%
!! ATTTGATTTGGAAGATCAAG+AGG + chr3.4:76934493-76934512 MS.gene69732:CDS 30.0%
!! GAGTGACTTATTTTCCTTAT+GGG + chr3.4:76935009-76935028 MS.gene69732:CDS 30.0%
!! TGATTTGTTGACAAAGTTGT+TGG + chr3.4:76934638-76934657 MS.gene69732:CDS 30.0%
!! TTTGATTTGGAAGATCAAGA+GGG + chr3.4:76934494-76934513 MS.gene69732:CDS 30.0%
!!! GTTATTAGTTTTATCATGGC+AGG + chr3.4:76934696-76934715 MS.gene69732:CDS 30.0%
AAGGAGGTAATAATAACGAC+GGG + chr3.4:76935111-76935130 MS.gene69732:CDS 35.0%
AATTTCACCAACTTCCCTAA+AGG + chr3.4:76934099-76934118 MS.gene69732:CDS 35.0%
AGAGTTCAAAATGGAACGTA+TGG + chr3.4:76935347-76935366 MS.gene69732:CDS 35.0%
ATTCCAATCTTTACCCCATA+GGG - chr3.4:76935051-76935070 None:intergenic 35.0%
CATCTTGCATGTCAATAACA+TGG - chr3.4:76934323-76934342 None:intergenic 35.0%
GAAGGAGGTAATAATAACGA+CGG + chr3.4:76935110-76935129 MS.gene69732:CDS 35.0%
GTCCACAAAAGAGTTCAAAA+TGG + chr3.4:76935338-76935357 MS.gene69732:CDS 35.0%
TCGCTAAGAATTTCAGTGAA+GGG - chr3.4:76934129-76934148 None:intergenic 35.0%
TGAAATCATGGTGAGAGATA+TGG + chr3.4:76934674-76934693 MS.gene69732:CDS 35.0%
TTGATGAGGATTGTTTGAGT+TGG - chr3.4:76934012-76934031 None:intergenic 35.0%
TTGTTGACAAAGTTGTTGGA+AGG + chr3.4:76934642-76934661 MS.gene69732:CDS 35.0%
! GAAATTCTTAGCGACCTTTT+AGG + chr3.4:76934135-76934154 MS.gene69732:CDS 35.0%
! GAGACCTTGTTGTAAATTCA+TGG - chr3.4:76934218-76934237 None:intergenic 35.0%
! TCCTTTTCTTACGGCTTATA+TGG + chr3.4:76935295-76935314 MS.gene69732:CDS 35.0%
! TTGACATGCAAGATGTTTTG+AGG + chr3.4:76934328-76934347 MS.gene69732:CDS 35.0%
!! CTTATTTTCCTTATGGGATG+GGG + chr3.4:76935015-76935034 MS.gene69732:CDS 35.0%
!! GACTTATTTTCCTTATGGGA+TGG + chr3.4:76935013-76935032 MS.gene69732:CDS 35.0%
!! GATTGTTTGAGTTGGAGATT+GGG - chr3.4:76934004-76934023 None:intergenic 35.0%
!! TTTAGGGAAGTTGGTGAAAT+TGG - chr3.4:76934100-76934119 None:intergenic 35.0%
!!! AAGTTTTCGGTTTTTCAAGC+CGG + chr3.4:76935158-76935177 MS.gene69732:CDS 35.0%
!!! AGTTGGTGAAATTGGTTTTG+AGG - chr3.4:76934092-76934111 None:intergenic 35.0%
ACTATCAATTCCTCTTGGCT+TGG - chr3.4:76934777-76934796 None:intergenic 40.0%
AGATAAGGCAACCTATGATG+GGG - chr3.4:76933930-76933949 None:intergenic 40.0%
AGGAGGTAATAATAACGACG+GGG + chr3.4:76935112-76935131 MS.gene69732:CDS 40.0%
AGGATGTATTCGACATTGAG+AGG - chr3.4:76934072-76934091 None:intergenic 40.0%
CATTCCAATCTTTACCCCAT+AGG - chr3.4:76935052-76935071 None:intergenic 40.0%
CTTGTTTGTGTGAGTCAATG+AGG + chr3.4:76934901-76934920 MS.gene69732:CDS 40.0%
GAAAAGGAACAAAAACCGGT+TGG - chr3.4:76935283-76935302 None:intergenic 40.0%
GAGATAAGGCAACCTATGAT+GGG - chr3.4:76933931-76933950 None:intergenic 40.0%
GAGTGTAGAAATCTAGAAGG+CGG - chr3.4:76933972-76933991 None:intergenic 40.0%
GCAGCCATGAATTTACAACA+AGG + chr3.4:76934211-76934230 MS.gene69732:CDS 40.0%
GCCATATAAGCCGTAAGAAA+AGG - chr3.4:76935299-76935318 None:intergenic 40.0%
GGAATGAGTTTAAACCAGAG+CGG + chr3.4:76935066-76935085 MS.gene69732:CDS 40.0%
GGATGTATTCGACATTGAGA+GGG - chr3.4:76934071-76934090 None:intergenic 40.0%
GGGTTGTGAAGTGTGAAATA+TGG - chr3.4:76933885-76933904 None:intergenic 40.0%
GGTGAGTGTAGAAATCTAGA+AGG - chr3.4:76933975-76933994 None:intergenic 40.0%
GTCAAATAATCCAAGCCAAG+AGG + chr3.4:76934764-76934783 MS.gene69732:CDS 40.0%
GTCGCTAAGAATTTCAGTGA+AGG - chr3.4:76934130-76934149 None:intergenic 40.0%
TGAATATGCCGCAACCTAAA+AGG - chr3.4:76934152-76934171 None:intergenic 40.0%
TGACAAAGTTGTTGGAAGGA+GGG + chr3.4:76934646-76934665 MS.gene69732:CDS 40.0%
TGAGATAAGGCAACCTATGA+TGG - chr3.4:76933932-76933951 None:intergenic 40.0%
TGCGGCATATTCAATGTAGA+TGG + chr3.4:76934159-76934178 MS.gene69732:CDS 40.0%
TTATTACCTCCTTCTCCGTT+TGG - chr3.4:76935104-76935123 None:intergenic 40.0%
TTCTCTTGAAGAGAAGGAAG+AGG - chr3.4:76933837-76933856 None:intergenic 40.0%
TTGACAAAGTTGTTGGAAGG+AGG + chr3.4:76934645-76934664 MS.gene69732:CDS 40.0%
TTTCTTACGGCTTATATGGC+TGG + chr3.4:76935299-76935318 MS.gene69732:CDS 40.0%
TTTGATGAACCAAACGGAGA+AGG + chr3.4:76935092-76935111 MS.gene69732:CDS 40.0%
! AAAGGAGTGAGGGAAGTTTT+TGG + chr3.4:76934798-76934817 MS.gene69732:CDS 40.0%
! CAGTGAAGGGTTTTCCTTTA+GGG - chr3.4:76934116-76934135 None:intergenic 40.0%
! TCAGTGAAGGGTTTTCCTTT+AGG - chr3.4:76934117-76934136 None:intergenic 40.0%
! TGTGAGCCCTTACAAGTTTT+CGG + chr3.4:76935145-76935164 MS.gene69732:CDS 40.0%
!! ATCAAGAGGGTGCTTAATGT+AGG + chr3.4:76934507-76934526 MS.gene69732:CDS 40.0%
!! GGATTGTTTGAGTTGGAGAT+TGG - chr3.4:76934005-76934024 None:intergenic 40.0%
!! TCAAGAGGGTGCTTAATGTA+GGG + chr3.4:76934508-76934527 MS.gene69732:CDS 40.0%
!! TGGCTATGATCCTTGTTGTT+TGG + chr3.4:76934386-76934405 MS.gene69732:CDS 40.0%
AACAATGATGTGTTGCCGGA+CGG + chr3.4:76934963-76934982 MS.gene69732:CDS 45.0%
AGTCTGTCTTGGGAAAGACA+TGG + chr3.4:76935187-76935206 MS.gene69732:CDS 45.0%
ATGAGTTTAAACCAGAGCGG+TGG + chr3.4:76935069-76935088 MS.gene69732:CDS 45.0%
CGAGCGTATTGCACTTATCT+CGG - chr3.4:76934460-76934479 None:intergenic 45.0%
CGGTGGTTTGATGAACCAAA+CGG + chr3.4:76935086-76935105 MS.gene69732:CDS 45.0%
GCCTGTATCTATTGACCAAC+CGG + chr3.4:76935265-76935284 MS.gene69732:CDS 45.0%
GTATTCGACATTGAGAGGGT+TGG - chr3.4:76934067-76934086 None:intergenic 45.0%
GTCAATGAGGTTGTATCCAC+CGG + chr3.4:76934914-76934933 MS.gene69732:CDS 45.0%
TCTTTCCCAAGACAGACTCT+TGG - chr3.4:76935185-76935204 None:intergenic 45.0%
TGTAGAAATCTAGAAGGCGG+TGG - chr3.4:76933969-76933988 None:intergenic 45.0%
TTACGGCTTATATGGCTGGT+GGG + chr3.4:76935303-76935322 MS.gene69732:CDS 45.0%
! ACCGGTTGGTCAATAGATAC+AGG - chr3.4:76935269-76935288 None:intergenic 45.0%
! AGGAGGGCATGATGAAATCA+TGG + chr3.4:76934662-76934681 MS.gene69732:CDS 45.0%
! ATTTTCCTTATGGGATGGGG+AGG + chr3.4:76935018-76935037 MS.gene69732:CDS 45.0%
! CAACCTATGATGGGGTATGA+AGG - chr3.4:76933922-76933941 None:intergenic 45.0%
! CTATGATGGGGTATGAAGGA+GGG - chr3.4:76933918-76933937 None:intergenic 45.0%
! TATGATGGGGTATGAAGGAG+GGG - chr3.4:76933917-76933936 None:intergenic 45.0%
!! ACCTTTGCCACCACTTTTGT+CGG + chr3.4:76934419-76934438 MS.gene69732:CDS 45.0%
!! GGGTTTTCCTTTAGGGAAGT+TGG - chr3.4:76934109-76934128 None:intergenic 45.0%
!!! CTTAGCGACCTTTTAGGTTG+CGG + chr3.4:76934141-76934160 MS.gene69732:CDS 45.0%
AATGAGGTTGTATCCACCGG+TGG + chr3.4:76934917-76934936 MS.gene69732:CDS 50.0%
ACAATCCTCATCAACCGCCT+CGG + chr3.4:76934018-76934037 MS.gene69732:CDS 50.0%
AGGCCCTATGGGGTAAAGAT+TGG + chr3.4:76935045-76935064 MS.gene69732:CDS 50.0%
ATCATTGTTGGCGGCATGCT+TGG - chr3.4:76934952-76934971 None:intergenic 50.0%
CCTCCTTCATACCCCATCAT+AGG + chr3.4:76933916-76933935 MS.gene69732:CDS 50.0%
CGCCAACAATGATGTGTTGC+CGG + chr3.4:76934959-76934978 MS.gene69732:CDS 50.0%
CGGCAACACATCATTGTTGG+CGG - chr3.4:76934961-76934980 None:intergenic 50.0%
CTTACGGCTTATATGGCTGG+TGG + chr3.4:76935302-76935321 MS.gene69732:CDS 50.0%
GACGGAACTAGGGTTGGAAA+AGG + chr3.4:76934981-76935000 MS.gene69732:CDS 50.0%
GAGTTGGAGATTGGGAGAGA+AGG - chr3.4:76933996-76934015 None:intergenic 50.0%
GATGAACCAAACGGAGAAGG+AGG + chr3.4:76935095-76935114 MS.gene69732:CDS 50.0%
GGAACGTATGGCCGCAAAAT+GGG + chr3.4:76935359-76935378 MS.gene69732:CDS 50.0%
GGTTGGCGGTTATGATGGTT+CGG - chr3.4:76934050-76934069 None:intergenic 50.0%
GTCCGGCAACACATCATTGT+TGG - chr3.4:76934964-76934983 None:intergenic 50.0%
TGGAACGTATGGCCGCAAAA+TGG + chr3.4:76935358-76935377 MS.gene69732:CDS 50.0%
TTCGACATTGAGAGGGTTGG+CGG - chr3.4:76934064-76934083 None:intergenic 50.0%
TTGTCGAACGCCGACAAAAG+TGG - chr3.4:76934432-76934451 None:intergenic 50.0%
TTTCCAACCCTAGTTCCGTC+CGG - chr3.4:76934981-76935000 None:intergenic 50.0%
! ATGAAGGAGGGGTGTGAGTA+GGG - chr3.4:76933906-76933925 None:intergenic 50.0%
! CCTATGATGGGGTATGAAGG+AGG - chr3.4:76933919-76933938 None:intergenic 50.0%
! TATGAAGGAGGGGTGTGAGT+AGG - chr3.4:76933907-76933926 None:intergenic 50.0%
ATGTGTTGCCGGACGGAACT+AGG + chr3.4:76934970-76934989 MS.gene69732:CDS 55.0%
CCCAAGACAGACTCTTGGAC+CGG - chr3.4:76935180-76935199 None:intergenic 55.0%
CCGGTCCAAGAGTCTGTCTT+GGG + chr3.4:76935177-76935196 MS.gene69732:CDS 55.0%
CGGCAATGACGTGGCTTCTT+TGG + chr3.4:76934736-76934755 MS.gene69732:CDS 55.0%
GCCGACAAAAGTGGTGGCAA+AGG - chr3.4:76934423-76934442 None:intergenic 55.0%
GGTTCATCAAACCACCGCTC+TGG - chr3.4:76935083-76935102 None:intergenic 55.0%
TCCATCCTCCCCATCCCATA+AGG - chr3.4:76935026-76935045 None:intergenic 55.0%
TCCTTATGGGATGGGGAGGA+TGG + chr3.4:76935022-76935041 MS.gene69732:CDS 55.0%
TCGAACGCCGACAAAAGTGG+TGG - chr3.4:76934429-76934448 None:intergenic 55.0%
TGTGTTGCCGGACGGAACTA+GGG + chr3.4:76934971-76934990 MS.gene69732:CDS 55.0%
TTATGGGATGGGGAGGATGG+AGG + chr3.4:76935025-76935044 MS.gene69732:CDS 55.0%
! GAGAGGGTTGGCGGTTATGA+TGG - chr3.4:76934055-76934074 None:intergenic 55.0%
! TGAAGGAGGGGTGTGAGTAG+GGG - chr3.4:76933905-76933924 None:intergenic 55.0%
GCCGGTCCAAGAGTCTGTCT+TGG + chr3.4:76935176-76935195 MS.gene69732:CDS 60.0%
GTTGTATCCACCGGTGGCGT+GGG + chr3.4:76934923-76934942 MS.gene69732:CDS 60.0%
TGCTTGGAATCCCACGCCAC+CGG - chr3.4:76934936-76934955 None:intergenic 60.0%
TTGCCGGACGGAACTAGGGT+TGG + chr3.4:76934975-76934994 MS.gene69732:CDS 60.0%
AGGGAGAGACACGACGTCGG+CGG + chr3.4:76934716-76934735 MS.gene69732:CDS 65.0%
GGCAGGGAGAGACACGACGT+CGG + chr3.4:76934713-76934732 MS.gene69732:CDS 65.0%
GGGAGGATGGAGGCCCTATG+GGG + chr3.4:76935035-76935054 MS.gene69732:CDS 65.0%
GGGGAGGATGGAGGCCCTAT+GGG + chr3.4:76935034-76935053 MS.gene69732:CDS 65.0%
GGTTGTATCCACCGGTGGCG+TGG + chr3.4:76934922-76934941 MS.gene69732:CDS 65.0%
TGGGGAGGATGGAGGCCCTA+TGG + chr3.4:76935033-76935052 MS.gene69732:CDS 65.0%
TTGGAATCCCACGCCACCGG+TGG - chr3.4:76934933-76934952 None:intergenic 65.0%
CGACGTCGGCGGCAATGACG+TGG + chr3.4:76934727-76934746 MS.gene69732:CDS 70.0%
! GCGCGCCGAGGCGGTTGATG+AGG - chr3.4:76934026-76934045 None:intergenic 75.0%
! TGATGGTTCGGCGCGCGCCG+AGG - chr3.4:76934038-76934057 None:intergenic 75.0%
!! TGGTTCGGCGCGCGCCGAGG+CGG - chr3.4:76934035-76934054 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 76933799 76935388 76933799 ID=MS.gene69732
chr3.4 mRNA 76933799 76935388 76933799 ID=MS.gene69732.t1;Parent=MS.gene69732
chr3.4 exon 76933799 76935388 76933799 ID=MS.gene69732.t1.exon1;Parent=MS.gene69732.t1
chr3.4 CDS 76933799 76935388 76933799 ID=cds.MS.gene69732.t1;Parent=MS.gene69732.t1
Gene Sequence

>MS.gene69732

ATGTTGTTCTACTACATTTTCTTTGCTATTATCTTCCTCTTCCTTCTCTTCAAGAGAATAATACTAACTCACAATCCCAAAAACCATATTTCACACTTCACAACCCCTACTCACACCCCTCCTTCATACCCCATCATAGGTTGCCTTATCTCATTCTACAAAAACAGCCACCGCCTTCTAGATTTCTACACTCACCTTCTCTCCCAATCTCCAACTCAAACAATCCTCATCAACCGCCTCGGCGCGCGCCGAACCATCATAACCGCCAACCCTCTCAATGTCGAATACATCCTCAAAACCAATTTCACCAACTTCCCTAAAGGAAAACCCTTCACTGAAATTCTTAGCGACCTTTTAGGTTGCGGCATATTCAATGTAGATGGAAAGTTATGGTCAAAACAACGTAAAATAGGCAGCCATGAATTTACAACAAGGTCTCTCAAAGACTTTGTTGCAAAGACACTTGAAGATGAAGTTCAACAAAGACTTATCCCATTGCTTGAATTAGCTTCTAATGGAAACCATGTTATTGACATGCAAGATGTTTTGAGGAGACTCACGTTTGAAATTGTGTGTAAAGTTTCACTTGGCTATGATCCTTGTTGTTTGGATTTATCTAAACCTTTGCCACCACTTTTGTCGGCGTTCGACAAAGCTTCCGAGATAAGTGCAATACGCTCGCATTCACCGATTCATTTGATTTGGAAGATCAAGAGGGTGCTTAATGTAGGGTCTGAGAAATTGCTTAAAGAAGCTGTTAAACTCGTTCATGAATCAGTGAACGAGATAATAAGGAAGAAGAAGAAAGAAATTAGTGAAAGAAATAATGTTAGTGGGAGTGATTTGTTGACAAAGTTGTTGGAAGGAGGGCATGATGAAATCATGGTGAGAGATATGGTTATTAGTTTTATCATGGCAGGGAGAGACACGACGTCGGCGGCAATGACGTGGCTTCTTTGGTTGTTGTCAAATAATCCAAGCCAAGAGGAATTGATAGTAAAAGGAGTGAGGGAAGTTTTTGGAAGAAAAAATAATGATGATGAGTTTGAGTTGATGAGATCTTTTGATTATGAAGGTTTGAAAGAGATGAAATATTTGAAAGCTTGTTTGTGTGAGTCAATGAGGTTGTATCCACCGGTGGCGTGGGATTCCAAGCATGCCGCCAACAATGATGTGTTGCCGGACGGAACTAGGGTTGGAAAAGGCGATAGAGTGACTTATTTTCCTTATGGGATGGGGAGGATGGAGGCCCTATGGGGTAAAGATTGGAATGAGTTTAAACCAGAGCGGTGGTTTGATGAACCAAACGGAGAAGGAGGTAATAATAACGACGGGGTTTTGAAATATGTGAGCCCTTACAAGTTTTCGGTTTTTCAAGCCGGTCCAAGAGTCTGTCTTGGGAAAGACATGGCTTTTATTCAAATGGAATATGTCGTGGCTTCGATTCTGAACCAATTTGAAATTAGGCCTGTATCTATTGACCAACCGGTTTTTGTTCCTTTTCTTACGGCTTATATGGCTGGTGGGTTCAACGTGAGAGTCCACAAAAGAGTTCAAAATGGAACGTATGGCCGCAAAATGGGAGCATAG

Protein sequence

>MS.gene69732.t1

MLFYYIFFAIIFLFLLFKRIILTHNPKNHISHFTTPTHTPPSYPIIGCLISFYKNSHRLLDFYTHLLSQSPTQTILINRLGARRTIITANPLNVEYILKTNFTNFPKGKPFTEILSDLLGCGIFNVDGKLWSKQRKIGSHEFTTRSLKDFVAKTLEDEVQQRLIPLLELASNGNHVIDMQDVLRRLTFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAIRSHSPIHLIWKIKRVLNVGSEKLLKEAVKLVHESVNEIIRKKKKEISERNNVSGSDLLTKLLEGGHDEIMVRDMVISFIMAGRDTTSAAMTWLLWLLSNNPSQEELIVKGVREVFGRKNNDDEFELMRSFDYEGLKEMKYLKACLCESMRLYPPVAWDSKHAANNDVLPDGTRVGKGDRVTYFPYGMGRMEALWGKDWNEFKPERWFDEPNGEGGNNNDGVLKYVSPYKFSVFQAGPRVCLGKDMAFIQMEYVVASILNQFEIRPVSIDQPVFVPFLTAYMAGGFNVRVHKRVQNGTYGRKMGA