AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70542


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70542.t1 MTR_3g080580 96.786 529 17 0 1 529 1 529 0.0 1064
MS.gene70542.t1 MTR_7g029275 57.061 524 198 7 3 519 7 510 0.0 586
MS.gene70542.t1 MTR_7g096340 45.679 486 236 6 40 518 39 503 1.02e-150 441
MS.gene70542.t1 MTR_7g096320 44.400 500 250 5 26 518 26 504 1.18e-147 433
MS.gene70542.t1 MTR_1g070345 45.437 515 247 10 10 517 17 504 6.91e-146 429
MS.gene70542.t1 MTR_1g070365 44.000 525 261 10 1 517 5 504 4.16e-143 422
MS.gene70542.t1 MTR_7g088330 44.061 522 259 12 5 517 11 508 7.10e-137 406
MS.gene70542.t1 MTR_4g054920 46.835 474 215 9 59 518 67 517 2.23e-136 405
MS.gene70542.t1 MTR_2g086040 47.403 462 213 7 59 517 64 498 1.97e-134 399
MS.gene70542.t1 MTR_1g060550 43.856 472 240 6 51 517 61 512 3.17e-130 389
MS.gene70542.t1 MTR_4g075110 39.335 511 277 10 20 517 59 549 2.95e-115 352
MS.gene70542.t1 MTR_1g037560 39.877 489 272 8 41 517 65 543 5.54e-112 343
MS.gene70542.t1 MTR_1g037550 41.295 448 235 7 86 517 112 547 1.08e-111 343
MS.gene70542.t1 MTR_5g019140 37.426 505 272 10 40 517 43 530 1.15e-105 327
MS.gene70542.t1 MTR_4g119660 36.634 505 276 9 40 517 28 515 7.13e-105 324
MS.gene70542.t1 MTR_8g098435 36.072 499 293 10 31 517 21 505 1.22e-100 313
MS.gene70542.t1 MTR_5g070010 35.616 511 280 11 32 517 22 508 5.21e-100 311
MS.gene70542.t1 MTR_1g102220 35.537 484 284 10 43 517 42 506 6.31e-97 303
MS.gene70542.t1 MTR_8g035860 36.905 504 276 13 7 497 14 488 4.88e-96 301
MS.gene70542.t1 MTR_8g035680 34.855 482 290 10 43 517 48 512 8.48e-95 298
MS.gene70542.t1 MTR_8g030590 34.714 507 308 9 31 524 21 517 8.54e-95 298
MS.gene70542.t1 MTR_8g035820 36.238 505 282 13 6 497 11 488 1.35e-94 297
MS.gene70542.t1 MTR_6g004630 34.433 485 291 9 43 517 36 503 1.04e-93 295
MS.gene70542.t1 MTR_8g035810 34.325 504 294 11 6 497 11 489 6.70e-93 293
MS.gene70542.t1 MTR_8g035760 34.375 480 294 9 43 517 48 511 1.16e-92 292
MS.gene70542.t1 MTR_3g463060 35.471 499 276 10 32 512 27 497 2.81e-92 291
MS.gene70542.t1 MTR_6g004670 34.021 485 294 8 43 517 37 505 2.47e-89 283
MS.gene70542.t1 MTR_7g033570 33.939 495 301 11 30 517 19 494 7.17e-89 282
MS.gene70542.t1 MTR_6g004600 34.314 510 295 11 31 517 23 515 8.48e-89 282
MS.gene70542.t1 MTR_6g004610 33.610 482 289 11 49 518 2 464 5.39e-88 279
MS.gene70542.t1 MTR_8g088470 34.343 495 300 12 30 517 15 491 1.54e-87 278
MS.gene70542.t1 MTR_1g036200 33.208 533 307 13 2 518 1 500 7.80e-87 277
MS.gene70542.t1 MTR_1g035790 33.133 498 286 9 41 517 31 502 1.86e-86 276
MS.gene70542.t1 MTR_6g004590 34.185 509 295 12 32 517 24 515 5.98e-86 275
MS.gene70542.t1 MTR_7g033580 33.333 498 300 12 30 517 19 494 1.08e-84 271
MS.gene70542.t1 MTR_1g036270 31.455 550 302 12 2 517 3 511 2.84e-84 270
MS.gene70542.t1 MTR_1g035670 33.797 503 281 13 39 518 30 503 4.10e-84 270
MS.gene70542.t1 MTR_8g035780 34.672 473 277 11 30 489 28 481 5.66e-84 270
MS.gene70542.t1 MTR_1g050362 31.387 548 302 14 2 517 1 506 1.23e-82 266
MS.gene70542.t1 MTR_8g035810 33.191 467 275 11 6 460 11 452 9.26e-80 257
MS.gene70542.t1 MTR_1g035750 33.806 494 293 15 41 518 31 506 1.18e-79 258
MS.gene70542.t1 MTR_1g035760 32.591 494 276 13 39 518 30 480 6.11e-79 256
MS.gene70542.t1 MTR_1g036130 32.806 506 284 14 40 518 31 507 7.91e-79 256
MS.gene70542.t1 MTR_1g035830 34.791 503 279 17 39 517 30 507 7.92e-77 251
MS.gene70542.t1 MTR_1g035580 30.315 508 282 10 41 517 30 496 3.40e-74 244
MS.gene70542.t1 MTR_1g036010 31.774 513 281 16 39 517 30 507 4.86e-74 243
MS.gene70542.t1 MTR_1g035800 32.335 501 294 11 42 517 32 512 2.84e-71 236
MS.gene70542.t1 MTR_1g035940 31.791 497 296 15 42 517 33 507 2.64e-69 231
MS.gene70542.t1 MTR_7g406990 37.297 370 214 7 23 383 36 396 7.99e-68 225
MS.gene70542.t1 MTR_3g080610 45.763 295 74 4 181 474 90 299 5.40e-67 219
MS.gene70542.t1 MTR_8g035680 31.746 378 237 8 147 517 2 365 6.70e-66 218
MS.gene70542.t1 MTR_1g069715 31.350 437 256 11 92 507 1 414 5.72e-62 215
MS.gene70542.t1 MTR_1g070370 44.800 250 125 2 178 426 5 242 4.65e-59 196
MS.gene70542.t1 MTR_1g035860 30.085 472 277 13 5 458 13 449 1.19e-58 202
MS.gene70542.t1 MTR_1g102210 33.333 357 190 9 170 517 44 361 2.97e-55 190
MS.gene70542.t1 MTR_8g035810 31.525 387 238 10 6 380 11 382 1.82e-54 189
MS.gene70542.t1 MTR_4g012320 36.123 227 127 4 292 516 12 222 2.04e-45 159
MS.gene70542.t1 MTR_2g061740 40.816 196 102 2 71 255 3 195 5.80e-40 144
MS.gene70542.t1 MTR_2g061750 40.306 196 103 2 71 255 3 195 5.71e-39 141
MS.gene70542.t1 MTR_2g062670 40.761 184 102 3 176 357 66 244 7.42e-32 128
MS.gene70542.t1 MTR_2g062670 34.392 189 82 4 176 364 282 428 7.58e-23 102
MS.gene70542.t1 MTR_7g079440 25.166 453 298 16 80 519 226 650 8.61e-32 130
MS.gene70542.t1 MTR_8g042020 25.597 461 264 18 84 516 113 522 5.12e-29 120
MS.gene70542.t1 MTR_1g062190 23.956 455 300 15 81 519 117 541 9.29e-29 120
MS.gene70542.t1 MTR_8g042060 24.726 457 281 18 81 516 109 523 2.01e-28 119
MS.gene70542.t1 MTR_8g042000 25.966 466 264 17 81 516 109 523 2.02e-28 119
MS.gene70542.t1 MTR_2g072270 25.566 442 263 13 81 499 109 507 9.81e-28 117
MS.gene70542.t1 MTR_2g055430 25.866 433 248 16 80 486 102 487 5.03e-27 114
MS.gene70542.t1 MTR_2g072340 26.859 417 234 15 109 497 125 498 1.00e-26 114
MS.gene70542.t1 MTR_2g072400 25.463 432 262 15 89 499 108 500 3.31e-26 112
MS.gene70542.t1 MTR_7g079440 25.654 382 250 13 80 449 226 585 4.52e-26 112
MS.gene70542.t1 MTR_2g055470 25.866 433 248 16 80 486 102 487 6.12e-26 111
MS.gene70542.t1 MTR_8g046580 44.800 125 57 2 383 507 193 305 1.21e-25 107
MS.gene70542.t1 MTR_8g046580 31.527 203 119 4 36 238 8 190 1.45e-22 98.6
MS.gene70542.t1 MTR_8g042060 24.558 452 252 17 81 516 109 487 1.24e-25 110
MS.gene70542.t1 MTR_2g023680 25.386 453 286 11 63 499 86 502 1.52e-25 110
MS.gene70542.t1 MTR_6g017325 26.720 378 231 11 118 486 136 476 2.96e-25 109
MS.gene70542.t1 MTR_1g101040 27.427 412 248 17 93 489 112 487 4.61e-25 108
MS.gene70542.t1 MTR_4g104610 24.449 499 311 17 11 486 10 465 7.68e-25 108
MS.gene70542.t1 MTR_1g101050 27.665 394 238 16 108 489 125 483 1.13e-24 107
MS.gene70542.t1 MTR_7g006900 25.266 376 239 9 118 486 101 441 3.47e-24 105
MS.gene70542.t1 MTR_6g072490 26.904 394 241 16 108 489 127 485 2.44e-23 103
MS.gene70542.t1 MTR_5g009110 21.973 446 295 14 80 488 111 540 3.67e-23 103
MS.gene70542.t1 MTR_1g069200 25.339 442 287 16 69 499 87 496 9.55e-23 102
MS.gene70542.t1 MTR_8g042040 25.339 442 273 19 84 516 113 506 1.37e-22 101
MS.gene70542.t1 MTR_0025s0110 25.510 392 251 14 108 489 138 498 3.55e-22 100
MS.gene70542.t1 MTR_4g031820 25.052 483 291 19 58 516 92 527 4.53e-22 100
MS.gene70542.t1 MTR_0147s0030 25.412 425 249 14 86 488 124 502 5.07e-22 99.8
MS.gene70542.t1 MTR_5g095290 25.338 517 296 25 5 487 5 465 1.00e-21 99.0
MS.gene70542.t1 MTR_2g072310 25.989 354 201 12 169 499 20 335 1.28e-21 96.7
MS.gene70542.t1 MTR_2g010250 24.658 511 318 21 3 487 4 473 3.33e-21 97.1
MS.gene70542.t1 MTR_6g084770 24.547 497 314 13 10 486 14 469 3.45e-21 97.1
MS.gene70542.t1 MTR_4g104550 23.922 464 301 17 39 487 31 457 3.84e-21 97.1
MS.gene70542.t1 MTR_3g093530 26.733 404 227 16 108 486 134 493 3.88e-21 97.1
MS.gene70542.t1 MTR_8g469360 25.058 431 250 12 81 486 11 393 3.99e-21 96.3
MS.gene70542.t1 MTR_5g070710 24.756 513 303 20 2 486 8 465 7.04e-21 96.3
MS.gene70542.t1 MTR_5g019010 24.277 519 318 18 7 494 7 481 8.86e-21 95.9
MS.gene70542.t1 MTR_2g010330 24.498 498 332 13 7 487 5 475 1.29e-20 95.5
MS.gene70542.t1 MTR_7g055793 26.150 413 261 15 86 488 117 495 1.64e-20 95.1
MS.gene70542.t1 MTR_7g055793 26.329 414 259 17 86 488 62 440 1.71e-20 94.7
MS.gene70542.t1 MTR_5g095230 24.201 438 277 18 80 499 98 498 2.19e-20 94.7
MS.gene70542.t1 MTR_2g061200 24.810 395 251 12 115 489 133 501 3.01e-20 94.4
MS.gene70542.t1 MTR_5g091760 25.397 504 313 20 5 497 7 458 3.45e-20 94.0
MS.gene70542.t1 MTR_4g031820 24.628 471 286 18 58 516 92 505 4.98e-20 93.6
MS.gene70542.t1 MTR_2g072380 27.759 299 166 11 239 516 81 350 5.30e-20 92.0
MS.gene70542.t1 MTR_2g072250 25.850 441 260 18 80 496 98 495 5.68e-20 93.6
MS.gene70542.t1 MTR_2g010290 24.502 502 318 19 5 487 41 500 1.01e-19 92.8
MS.gene70542.t1 MTR_2g061760 40.404 99 59 0 157 255 3 101 1.03e-19 85.1
MS.gene70542.t1 MTR_5g072980 23.881 469 285 17 50 487 40 467 1.64e-19 92.0
MS.gene70542.t1 MTR_5g072930 23.881 469 285 17 50 487 40 467 1.64e-19 92.0
MS.gene70542.t1 MTR_5g094520 25.444 507 308 18 3 487 38 496 2.10e-19 91.7
MS.gene70542.t1 MTR_2g072380 28.000 300 164 12 239 516 221 490 2.11e-19 91.7
MS.gene70542.t1 MTR_5g034900 24.074 486 304 14 40 491 35 489 3.44e-19 91.3
MS.gene70542.t1 MTR_0181s0030 24.652 503 322 19 1 486 4 466 3.72e-19 90.9
MS.gene70542.t1 MTR_2g010320 30.000 230 141 5 265 487 255 471 3.75e-19 90.9
MS.gene70542.t1 MTR_5g070690 24.303 502 313 16 7 486 10 466 4.56e-19 90.5
MS.gene70542.t1 MTR_5g070800 24.303 502 313 16 7 486 10 466 4.56e-19 90.5
MS.gene70542.t1 MTR_2g010380 31.169 231 137 6 265 487 261 477 7.20e-19 90.1
MS.gene70542.t1 MTR_5g094540 25.344 509 305 18 1 487 10 465 1.02e-18 89.7
MS.gene70542.t1 MTR_5g009110 21.739 437 289 14 119 517 1 422 1.70e-18 88.2
MS.gene70542.t1 MTR_2g062680 32.927 164 63 3 274 437 24 140 2.39e-18 83.6
MS.gene70542.t1 MTR_3g057980 23.232 495 338 16 1 487 1 461 2.49e-18 88.2
MS.gene70542.t1 MTR_6g008530 23.238 525 320 20 2 488 16 495 2.53e-18 88.6
MS.gene70542.t1 MTR_8g098565 29.018 224 143 4 267 486 261 472 2.63e-18 88.2
MS.gene70542.t1 MTR_2g061910 44.554 101 53 1 67 167 56 153 3.56e-18 82.4
MS.gene70542.t1 MTR_4g113650 22.843 394 249 8 114 489 135 491 4.03e-18 87.8
MS.gene70542.t1 MTR_4g088195 27.174 276 173 9 228 489 212 473 4.41e-18 87.8
MS.gene70542.t1 MTR_6g035115 22.931 423 276 13 79 487 76 462 4.50e-18 87.4
MS.gene70542.t1 MTR_5g073020 23.454 469 300 17 40 487 37 467 7.18e-18 87.0
MS.gene70542.t1 MTR_8g008530 24.332 374 254 8 118 487 141 489 7.25e-18 87.0
MS.gene70542.t1 MTR_0171s0020 23.494 498 333 18 7 487 7 473 1.23e-17 86.3
MS.gene70542.t1 MTR_7g012860 23.701 481 309 18 25 487 25 465 2.13e-17 85.5
MS.gene70542.t1 MTR_0287s0060 23.701 481 309 18 25 487 25 465 2.13e-17 85.5
MS.gene70542.t1 MTR_5g094520 25.118 422 269 13 79 487 4 391 2.17e-17 85.1
MS.gene70542.t1 MTR_4g071710 23.347 484 289 16 40 487 41 478 2.38e-17 85.5
MS.gene70542.t1 MTR_4g089025 22.288 507 332 18 1 487 19 483 2.57e-17 85.1
MS.gene70542.t1 MTR_4g089030 22.896 511 323 19 3 487 17 482 2.72e-17 85.1
MS.gene70542.t1 MTR_4g088160 25.725 276 177 9 228 489 212 473 2.81e-17 85.1
MS.gene70542.t1 MTR_2g010280 30.366 191 118 4 298 487 295 471 2.97e-17 85.1
MS.gene70542.t1 MTR_8g036185 25.180 417 262 16 97 487 91 483 3.53e-17 84.7
MS.gene70542.t1 MTR_1g023730 23.756 442 276 15 75 487 67 476 6.04e-17 84.0
MS.gene70542.t1 MTR_5g094660 24.057 424 270 13 79 487 78 464 7.90e-17 83.6
MS.gene70542.t1 MTR_4g088420 29.630 189 111 5 302 488 30 198 1.36e-16 79.7
MS.gene70542.t1 MTR_5g094570 22.986 509 318 17 3 487 7 465 1.46e-16 82.8
MS.gene70542.t1 MTR_7g027960 22.201 518 317 19 1 487 5 467 1.65e-16 82.8
MS.gene70542.t1 MTR_7g075580 23.707 464 290 18 47 487 45 467 1.65e-16 82.8
MS.gene70542.t1 MTR_2g065360 21.935 465 312 12 40 489 11 439 2.11e-16 82.0
MS.gene70542.t1 MTR_3g076560 21.458 480 293 13 39 487 54 480 2.24e-16 82.4
MS.gene70542.t1 MTR_0022s0290 22.638 508 333 15 5 487 9 481 2.58e-16 82.0
MS.gene70542.t1 MTR_4g048580 23.438 512 314 17 2 487 6 465 4.10e-16 81.3
MS.gene70542.t1 MTR_3g057910 22.414 464 307 13 40 487 42 468 4.54e-16 81.3
MS.gene70542.t1 MTR_8g063280 28.390 236 143 7 262 487 246 465 5.59e-16 80.9
MS.gene70542.t1 MTR_5g007450 22.027 513 333 16 2 494 10 475 6.64e-16 80.9
MS.gene70542.t1 MTR_3g057900 22.515 493 335 18 6 487 6 462 7.11e-16 80.9
MS.gene70542.t1 MTR_5g073250 23.346 514 318 20 1 487 1 465 7.50e-16 80.5
MS.gene70542.t1 MTR_7g079440 26.394 269 171 9 81 331 227 486 8.53e-16 80.5
MS.gene70542.t1 MTR_5g009110 22.159 352 236 11 80 411 111 444 1.04e-15 80.1
MS.gene70542.t1 MTR_4g104540 22.788 373 242 10 128 486 55 395 3.49e-15 78.2
MS.gene70542.t1 MTR_6g022450 22.844 429 301 9 79 497 78 486 3.65e-15 78.6
MS.gene70542.t1 MTR_1g102390 38.144 97 57 1 43 139 42 135 4.28e-15 72.8
MS.gene70542.t1 MTR_8g035790 42.308 78 35 1 412 489 1 68 5.02e-15 71.2
MS.gene70542.t1 MTR_4g018800 23.750 480 300 17 42 488 45 491 5.09e-15 78.2
MS.gene70542.t1 MTR_5g094550 24.902 510 307 21 3 487 7 465 5.18e-15 78.2
MS.gene70542.t1 MTR_6g008640 22.581 496 308 17 30 488 33 489 5.42e-15 78.2
MS.gene70542.t1 MTR_4g088170 24.911 281 175 9 228 489 212 475 5.49e-15 78.2
MS.gene70542.t1 MTR_3g058220 21.373 510 334 17 1 487 1 466 5.69e-15 77.8
MS.gene70542.t1 MTR_6g008600 25.581 258 159 9 244 488 256 493 8.07e-15 77.4
MS.gene70542.t1 MTR_5g026520 27.027 259 153 8 248 487 235 476 8.25e-15 77.4
MS.gene70542.t1 MTR_2g073440 25.197 254 159 7 254 497 227 459 8.51e-15 77.0
MS.gene70542.t1 MTR_5g073320 21.861 462 310 15 40 487 42 466 1.08e-14 77.0
MS.gene70542.t1 MTR_2g073480 25.197 254 159 7 254 497 160 392 1.39e-14 76.3
MS.gene70542.t1 MTR_3g057860 22.555 501 338 13 3 489 5 469 1.45e-14 76.6
MS.gene70542.t1 MTR_0171s0030 26.525 377 235 16 128 489 38 387 1.68e-14 75.9
MS.gene70542.t1 MTR_5g070850 22.986 509 320 18 1 486 9 468 1.82e-14 76.3
MS.gene70542.t1 MTR_2g073420 23.932 234 152 5 260 487 260 473 2.07e-14 76.3
MS.gene70542.t1 MTR_3g025260 23.678 435 271 15 79 486 70 470 2.12e-14 76.3
MS.gene70542.t1 MTR_8g042000 24.691 324 178 11 81 376 109 394 2.15e-14 75.5
MS.gene70542.t1 MTR_5g470730 24.070 457 280 19 5 434 10 426 2.99e-14 75.1
MS.gene70542.t1 MTR_5g094840 24.178 426 267 18 79 486 83 470 3.10e-14 75.5
MS.gene70542.t1 MTR_3g436540 20.079 508 328 18 7 487 18 474 3.12e-14 75.5
MS.gene70542.t1 MTR_3g057800 22.112 502 335 16 2 487 3 464 4.02e-14 75.1
MS.gene70542.t1 MTR_6g008430 21.825 504 338 21 7 488 15 484 5.95e-14 74.7
MS.gene70542.t1 MTR_5g070700 23.379 509 313 17 5 486 10 468 9.05e-14 74.3
MS.gene70542.t1 MTR_4g062510 28.125 192 121 5 296 487 307 481 9.15e-14 74.3
MS.gene70542.t1 MTR_5g095220 22.107 484 290 19 27 487 16 435 1.32e-13 73.6
MS.gene70542.t1 MTR_5g073230 22.105 475 291 14 35 487 37 454 2.13e-13 72.8
MS.gene70542.t1 MTR_3g057970 22.086 489 336 18 6 487 6 456 2.20e-13 72.8
MS.gene70542.t1 MTR_1g055325 24.180 244 159 5 264 501 274 497 2.32e-13 72.8
MS.gene70542.t1 MTR_6g042610 22.619 504 306 20 37 497 31 493 4.14e-13 72.0
MS.gene70542.t1 MTR_1g022040 21.219 443 285 13 75 499 91 487 4.22e-13 72.0
MS.gene70542.t1 MTR_2g010300 27.513 189 110 4 298 486 295 456 4.31e-13 72.0
MS.gene70542.t1 MTR_3g076530 22.445 499 331 16 4 487 11 468 4.52e-13 72.0
MS.gene70542.t1 MTR_8g012590 25.475 263 160 8 247 497 237 475 4.69e-13 72.0
MS.gene70542.t1 MTR_8g100135 25.194 258 164 9 251 501 228 463 4.90e-13 71.6
MS.gene70542.t1 MTR_7g098550 22.042 431 276 15 80 498 98 480 5.31e-13 71.6
MS.gene70542.t1 MTR_1g035140 22.308 520 315 22 2 489 5 467 5.73e-13 71.6
MS.gene70542.t1 MTR_7g075600 23.935 493 327 14 10 487 8 467 5.90e-13 71.6
MS.gene70542.t1 MTR_5g070920 23.214 504 318 15 9 486 7 467 6.61e-13 71.2
MS.gene70542.t1 MTR_4g077210 23.077 455 289 16 52 487 55 467 1.09e-12 70.9
MS.gene70542.t1 MTR_5g092150 21.809 376 246 10 123 492 115 448 1.22e-12 70.5
MS.gene70542.t1 MTR_6g035100 23.641 423 275 14 79 487 76 464 1.34e-12 70.5
MS.gene70542.t1 MTR_1g031700 20.174 461 319 11 40 487 38 462 1.51e-12 70.1
MS.gene70542.t1 MTR_3g467220 22.371 523 347 24 11 499 18 515 1.58e-12 70.1
MS.gene70542.t1 MTR_4g062500 21.458 480 306 17 39 487 38 477 3.93e-12 68.9
MS.gene70542.t1 MTR_5g021390 19.787 470 314 13 40 486 48 477 4.27e-12 68.9
MS.gene70542.t1 MTR_7g098550 21.868 439 275 16 80 498 98 488 4.31e-12 68.9
MS.gene70542.t1 MTR_3g436390 22.222 486 295 18 35 487 32 467 4.45e-12 68.9
MS.gene70542.t1 MTR_6g008620 22.957 257 166 7 244 488 255 491 5.39e-12 68.6
MS.gene70542.t1 MTR_5g056720 25.792 221 125 7 302 516 227 414 9.99e-12 67.4
MS.gene70542.t1 MTR_6g034940 24.638 207 130 6 296 499 284 467 1.14e-11 67.4
MS.gene70542.t1 MTR_6g034965 21.800 500 333 19 4 487 7 464 1.15e-11 67.4
MS.gene70542.t1 MTR_8g089800 21.702 470 313 17 40 497 44 470 2.27e-11 66.6
MS.gene70542.t1 MTR_8g077810 22.086 489 334 18 35 515 29 478 2.35e-11 66.6
MS.gene70542.t1 MTR_2g010530 22.275 422 280 13 79 487 73 459 2.55e-11 66.2
MS.gene70542.t1 MTR_4g078110 24.352 193 122 5 296 486 271 441 2.93e-11 66.2
MS.gene70542.t1 MTR_3g467290 19.882 508 355 18 3 487 20 498 3.15e-11 66.2
MS.gene70542.t1 MTR_8g020950 22.965 479 293 15 40 489 42 473 3.59e-11 65.9
MS.gene70542.t1 MTR_2g055430 25.704 284 177 11 80 346 102 368 3.91e-11 65.5
MS.gene70542.t1 MTR_4g026050 23.307 502 321 21 8 487 2 461 4.85e-11 65.5
MS.gene70542.t1 MTR_5g009110 22.045 313 207 10 119 411 1 296 6.83e-11 63.9
MS.gene70542.t1 MTR_3g058250 21.611 509 334 18 1 487 1 466 7.29e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70542.t1 AT3G48520 58.984 512 193 4 8 517 3 499 0.0 600
MS.gene70542.t1 AT5G63450 59.223 515 189 5 6 519 68 562 0.0 590
MS.gene70542.t1 AT5G63450 59.223 515 189 5 6 519 10 504 0.0 590
MS.gene70542.t1 AT3G01900 55.052 485 199 4 33 517 25 490 0.0 549
MS.gene70542.t1 AT3G56630 43.299 485 247 8 42 517 33 498 8.02e-136 403
MS.gene70542.t1 AT1G34540 42.171 479 260 5 42 517 33 497 5.31e-134 398
MS.gene70542.t1 AT2G27690 42.283 473 245 8 51 517 44 494 7.03e-125 375
MS.gene70542.t1 AT5G08250 38.911 496 265 9 41 517 2 478 9.07e-112 341
MS.gene70542.t1 AT5G08250 38.911 496 265 9 41 517 64 540 2.49e-111 342
MS.gene70542.t1 AT5G23190 41.441 444 237 6 85 517 109 540 4.03e-110 339
MS.gene70542.t1 AT1G24540 35.728 529 295 8 6 517 20 520 8.16e-108 332
MS.gene70542.t1 AT2G45510 37.426 505 286 11 20 512 17 503 1.70e-105 325
MS.gene70542.t1 AT2G44890 37.476 515 292 12 9 512 8 503 1.24e-103 321
MS.gene70542.t1 AT1G63710 37.805 492 278 11 40 517 30 507 1.17e-102 318
MS.gene70542.t1 AT3G26125 37.109 512 273 14 35 517 41 532 1.50e-102 319
MS.gene70542.t1 AT1G13140 37.525 493 279 11 40 517 46 524 3.45e-102 318
MS.gene70542.t1 AT2G45970 37.347 490 286 8 40 517 30 510 3.17e-100 313
MS.gene70542.t1 AT1G69500 35.922 515 274 12 40 517 28 523 3.76e-99 310
MS.gene70542.t1 AT2G23180 34.535 527 303 9 9 517 10 512 9.94e-98 305
MS.gene70542.t1 AT2G44890 36.381 514 281 13 9 512 8 485 5.01e-97 303
MS.gene70542.t1 AT4G00360 34.818 494 294 11 40 517 30 511 5.28e-96 302
MS.gene70542.t1 AT5G58860 35.294 493 287 7 40 517 33 508 1.10e-94 298
MS.gene70542.t1 AT1G13140 36.100 482 275 10 40 517 46 498 1.63e-93 294
MS.gene70542.t1 AT1G13150 35.471 499 291 10 35 517 34 517 4.74e-93 294
MS.gene70542.t1 AT1G01600 33.534 498 305 8 40 521 30 517 4.30e-91 290
MS.gene70542.t1 AT4G39480 35.158 475 281 8 58 517 51 513 2.16e-90 286
MS.gene70542.t1 AT4G39490 33.394 545 306 15 1 517 1 516 2.32e-90 286
MS.gene70542.t1 AT5G52320 33.400 500 294 10 32 516 26 501 1.64e-87 278
MS.gene70542.t1 AT2G21910 32.136 501 307 8 32 517 24 506 2.96e-87 278
MS.gene70542.t1 AT1G65340 32.790 491 290 9 42 516 36 502 4.94e-86 275
MS.gene70542.t1 AT5G52320 33.198 494 291 10 32 510 26 495 5.85e-86 275
MS.gene70542.t1 AT1G57750 30.320 531 321 11 1 518 3 497 1.40e-79 258
MS.gene70542.t1 AT4G32170 31.301 492 304 10 40 517 32 503 2.07e-77 252
MS.gene70542.t1 AT4G39510 32.056 496 293 9 42 517 34 505 2.32e-77 252
MS.gene70542.t1 AT4G39500 30.830 506 307 9 33 517 33 516 2.21e-76 250
MS.gene70542.t1 AT1G47620 30.930 527 329 9 10 520 11 518 1.65e-75 248
MS.gene70542.t1 AT4G39500 31.106 479 290 8 57 517 10 466 4.49e-74 243
MS.gene70542.t1 AT1G57750 30.635 457 277 10 1 444 3 432 2.50e-66 221
MS.gene70542.t1 AT5G02900 30.277 469 267 14 42 491 25 452 8.64e-64 216
MS.gene70542.t1 AT3G53130 25.778 450 294 12 81 517 117 539 7.03e-34 135
MS.gene70542.t1 AT1G31800 23.553 501 337 16 33 519 103 571 3.26e-28 119
MS.gene70542.t1 AT3G14640 25.450 444 256 15 80 496 100 495 2.65e-27 115
MS.gene70542.t1 AT3G14640 25.450 444 256 15 80 496 122 517 3.13e-27 115
MS.gene70542.t1 AT3G48300 22.030 463 304 12 39 487 32 451 8.99e-26 110
MS.gene70542.t1 AT3G48300 22.030 463 304 12 39 487 34 453 9.14e-26 110
MS.gene70542.t1 AT5G24900 26.450 431 252 16 81 486 106 496 1.42e-25 110
MS.gene70542.t1 AT3G14680 23.904 456 284 16 80 516 100 511 2.47e-25 109
MS.gene70542.t1 AT5G52400 27.692 390 238 14 108 488 136 490 4.74e-25 108
MS.gene70542.t1 AT5G24900 26.794 418 241 16 94 486 2 379 6.28e-25 107
MS.gene70542.t1 AT3G48310 22.961 466 300 15 39 489 35 456 1.60e-24 107
MS.gene70542.t1 AT3G48280 23.137 510 311 16 1 487 2 453 4.86e-24 105
MS.gene70542.t1 AT3G48270 22.814 469 297 12 39 489 34 455 1.55e-23 104
MS.gene70542.t1 AT5G24910 24.835 455 256 16 81 498 110 515 3.40e-23 103
MS.gene70542.t1 AT3G14690 24.533 428 261 12 109 516 161 546 1.74e-22 101
MS.gene70542.t1 AT3G14690 24.476 429 260 13 109 516 126 511 3.09e-22 100
MS.gene70542.t1 AT3G14660 23.333 450 284 13 85 516 105 511 6.49e-22 99.4
MS.gene70542.t1 AT3G48290 24.190 463 294 13 39 487 36 455 1.10e-21 98.6
MS.gene70542.t1 AT3G14650 23.744 438 275 14 80 499 100 496 2.54e-21 97.8
MS.gene70542.t1 AT4G13310 24.008 479 300 15 34 489 27 464 3.85e-21 97.1
MS.gene70542.t1 AT2G26710 23.418 474 283 15 35 486 69 484 7.25e-21 96.3
MS.gene70542.t1 AT3G14620 22.757 457 295 15 56 496 82 496 2.35e-20 94.7
MS.gene70542.t1 AT4G13290 23.355 471 305 15 34 489 28 457 2.94e-20 94.4
MS.gene70542.t1 AT5G38450 24.779 452 270 15 58 486 81 485 4.54e-20 94.0
MS.gene70542.t1 AT3G14630 23.736 455 284 14 81 516 97 507 8.17e-20 93.2
MS.gene70542.t1 AT4G15110 21.460 452 291 16 80 488 118 548 9.19e-20 93.2
MS.gene70542.t1 AT3G14630 23.725 451 281 14 85 516 156 562 1.36e-19 92.4
MS.gene70542.t1 AT3G14610 25.259 483 287 20 58 516 79 511 2.02e-19 91.7
MS.gene70542.t1 AT2G30770 23.958 480 297 18 34 489 28 463 2.11e-19 91.7
MS.gene70542.t1 AT3G10560 23.246 499 329 18 6 487 18 479 3.55e-19 91.3
MS.gene70542.t1 AT3G48290 24.691 486 289 16 39 487 36 481 8.76e-19 89.7
MS.gene70542.t1 AT3G25180 24.603 378 253 12 128 497 130 483 9.19e-19 89.7
MS.gene70542.t1 AT5G24950 23.729 472 297 17 40 489 33 463 1.01e-18 89.7
MS.gene70542.t1 AT5G25120 23.772 509 315 20 1 487 1 458 1.41e-18 89.0
MS.gene70542.t1 AT4G27710 24.726 457 268 16 58 488 82 488 2.46e-18 88.6
MS.gene70542.t1 AT3G03470 22.568 514 341 15 33 517 24 509 2.89e-18 88.2
MS.gene70542.t1 AT3G14660 26.736 288 177 8 239 516 102 365 3.04e-18 87.0
MS.gene70542.t1 AT1G64940 27.861 201 125 4 292 492 301 481 3.75e-18 87.8
MS.gene70542.t1 AT2G46950 25.490 408 254 12 94 488 171 541 4.01e-18 88.2
MS.gene70542.t1 AT4G37340 23.742 497 309 20 15 487 6 456 1.20e-17 86.3
MS.gene70542.t1 AT3G61040 27.126 247 148 7 250 487 238 461 1.64e-17 85.9
MS.gene70542.t1 AT5G07990 23.772 509 320 21 2 487 4 467 4.04e-17 84.7
MS.gene70542.t1 AT5G06905 23.019 530 344 20 5 509 8 498 4.33e-17 84.7
MS.gene70542.t1 AT4G13770 21.242 499 337 13 6 489 9 466 9.74e-17 83.6
MS.gene70542.t1 AT2G46660 24.197 467 297 23 40 490 74 499 1.54e-16 82.8
MS.gene70542.t1 AT2G45560 22.555 501 326 15 10 487 11 472 1.64e-16 82.8
MS.gene70542.t1 AT3G48320 21.385 491 324 12 10 487 13 454 2.14e-16 82.4
MS.gene70542.t1 AT2G24180 22.016 486 320 18 40 505 40 486 2.21e-16 82.4
MS.gene70542.t1 AT5G25130 23.031 508 320 17 1 487 1 458 2.77e-16 82.0
MS.gene70542.t1 AT1G11610 23.679 473 291 16 40 487 34 461 2.90e-16 82.0
MS.gene70542.t1 AT1G64930 26.866 201 129 4 292 492 299 481 3.39e-16 81.6
MS.gene70542.t1 AT1G11610 23.679 473 291 16 40 487 34 461 3.70e-16 81.6
MS.gene70542.t1 AT5G06900 23.340 497 329 17 7 489 6 464 7.44e-16 80.9
MS.gene70542.t1 AT5G05260 23.629 474 316 18 40 491 44 493 9.53e-16 80.5
MS.gene70542.t1 AT2G46960 23.358 411 252 13 97 486 1 369 9.54e-16 79.7
MS.gene70542.t1 AT5G04630 21.888 498 345 17 5 487 7 475 1.11e-15 80.1
MS.gene70542.t1 AT2G23220 23.340 467 297 18 40 487 47 471 1.49e-15 79.7
MS.gene70542.t1 AT2G12190 25.692 253 155 5 257 492 246 482 1.68e-15 79.7
MS.gene70542.t1 AT1G33720 21.242 499 341 16 5 487 10 472 2.94e-15 79.0
MS.gene70542.t1 AT4G39950 22.954 501 329 17 8 486 33 498 4.00e-15 78.6
MS.gene70542.t1 AT4G39950 22.954 501 329 17 8 486 73 538 4.05e-15 78.6
MS.gene70542.t1 AT1G64950 25.692 253 153 5 257 492 246 480 4.26e-15 78.2
MS.gene70542.t1 AT1G16410 22.081 471 318 14 40 486 49 494 5.13e-15 78.2
MS.gene70542.t1 AT1G67110 25.132 378 236 8 118 486 140 479 5.58e-15 78.2
MS.gene70542.t1 AT5G05260 23.291 468 293 15 40 491 44 461 6.67e-15 77.8
MS.gene70542.t1 AT5G04330 22.436 468 307 14 40 486 36 468 8.61e-15 77.4
MS.gene70542.t1 AT2G22330 23.126 467 313 14 40 487 85 524 8.92e-15 77.4
MS.gene70542.t1 AT2G22330 23.126 467 313 14 40 487 62 501 8.96e-15 77.4
MS.gene70542.t1 AT3G61880 22.669 472 318 21 29 487 59 496 9.18e-15 77.4
MS.gene70542.t1 AT2G25160 23.774 530 323 21 2 494 3 488 1.00e-14 77.4
MS.gene70542.t1 AT3G61880 22.669 472 318 21 29 487 59 496 1.03e-14 77.4
MS.gene70542.t1 AT1G01190 22.363 474 296 19 40 490 82 506 1.26e-14 77.0
MS.gene70542.t1 AT1G01190 22.363 474 296 19 40 490 77 501 1.72e-14 76.6
MS.gene70542.t1 AT3G26310 21.956 501 330 18 8 487 1 461 4.02e-14 75.1
MS.gene70542.t1 AT1G33720 25.664 226 142 6 265 487 138 340 4.08e-14 74.7
MS.gene70542.t1 AT1G33720 25.664 226 142 6 265 487 138 340 4.08e-14 74.7
MS.gene70542.t1 AT1G33720 25.664 226 142 6 265 487 138 340 4.08e-14 74.7
MS.gene70542.t1 AT5G42590 22.360 483 322 15 36 499 29 477 4.51e-14 75.1
MS.gene70542.t1 AT5G57260 20.892 493 341 14 39 517 33 490 4.65e-14 75.1
MS.gene70542.t1 AT5G09970 22.754 501 337 21 5 487 35 503 6.02e-14 74.7
MS.gene70542.t1 AT2G30750 22.904 489 305 18 27 489 21 463 1.05e-13 73.9
MS.gene70542.t1 AT3G26300 20.565 496 340 16 7 487 6 462 1.66e-13 73.2
MS.gene70542.t1 AT5G25180 22.056 467 304 15 40 487 33 458 3.55e-13 72.4
MS.gene70542.t1 AT4G37430 20.676 503 339 17 2 487 1 460 4.92e-13 72.0
MS.gene70542.t1 AT4G37360 24.016 508 309 18 1 487 5 456 5.22e-13 71.6
MS.gene70542.t1 AT1G01280 22.323 439 276 14 79 487 70 473 6.68e-13 71.6
MS.gene70542.t1 AT4G31970 24.579 297 186 11 244 523 247 522 2.14e-12 70.1
MS.gene70542.t1 AT1G16400 25.098 255 160 6 244 486 258 493 2.16e-12 70.1
MS.gene70542.t1 AT1G33720 26.702 191 120 4 297 487 195 365 3.43e-12 68.9
MS.gene70542.t1 AT3G32047 22.197 446 290 16 86 509 87 497 3.85e-12 68.9
MS.gene70542.t1 AT4G37320 21.687 498 319 18 14 487 6 456 4.21e-12 68.9
MS.gene70542.t1 AT5G67310 22.511 462 304 17 40 487 46 467 5.82e-12 68.6
MS.gene70542.t1 AT4G36220 24.887 221 138 6 266 486 287 479 8.27e-12 68.2
MS.gene70542.t1 AT4G22710 22.749 422 283 13 80 487 93 485 9.63e-12 67.8
MS.gene70542.t1 AT5G24960 21.830 481 309 14 33 489 27 464 9.66e-12 67.8
MS.gene70542.t1 AT4G22690 21.868 439 299 12 62 487 109 516 1.02e-11 67.8
MS.gene70542.t1 AT4G37410 21.499 507 337 19 2 492 1 462 1.25e-11 67.4
MS.gene70542.t1 AT3G26210 22.043 372 252 12 128 487 120 465 1.43e-11 67.4
MS.gene70542.t1 AT1G66540 23.118 372 233 13 131 487 10 343 1.88e-11 66.2
MS.gene70542.t1 AT4G31950 24.483 290 187 10 244 519 236 507 4.46e-11 65.9
MS.gene70542.t1 AT3G20950 25.417 240 151 8 261 489 260 482 4.66e-11 65.9
MS.gene70542.t1 AT3G20935 25.532 188 122 5 303 489 134 304 4.72e-11 64.7
MS.gene70542.t1 AT4G13310 23.544 395 248 14 34 405 27 390 4.72e-11 65.1
MS.gene70542.t1 AT3G26290 20.954 482 317 16 27 487 24 462 6.25e-11 65.1
MS.gene70542.t1 AT1G58260 25.882 255 159 9 245 487 251 487 6.32e-11 65.5
MS.gene70542.t1 AT3G26290 20.954 482 317 16 27 487 37 475 6.99e-11 65.1
MS.gene70542.t1 AT4G31940 24.573 293 183 10 244 519 248 519 8.87e-11 64.7
MS.gene70542.t1 AT3G53280 22.318 466 308 16 40 487 32 461 9.07e-11 64.7

Find 130 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAATGACGTGGCTTCTT+TGG 0.190026 3.1:-67586535 MS.gene70542:CDS
TTTAGGGAAGTTGGCGAAAT+TGG 0.235219 3.1:+67587174 None:intergenic
CAAGAGGAATTGATAGTAAA+AGG 0.261237 3.1:-67586491 MS.gene70542:CDS
TTGCTTGAATTAGCTTCTAA+TGG 0.266311 3.1:-67586977 MS.gene70542:CDS
TGGAACGTATGGCCGCAAAA+TGG 0.284925 3.1:-67585913 MS.gene70542:CDS
TTCTGAACCAATTTGAAATT+AGG 0.289436 3.1:-67586028 MS.gene70542:CDS
ATTCACCGATTCATTTGATT+TGG 0.292236 3.1:-67586790 MS.gene70542:CDS
TGGCTATGATCCTTGTTGTT+TGG 0.310845 3.1:-67586885 MS.gene70542:CDS
AATCAGTGAACGAGATAATA+AGG 0.325511 3.1:-67586700 MS.gene70542:CDS
TGGGGAGGATGGAGGCCCTA+TGG 0.339724 3.1:-67586238 MS.gene70542:CDS
ATACAGGCCTAATTTCAAAT+TGG 0.345276 3.1:+67586021 None:intergenic
TGAATATGCCGCAACCTAAA+AGG 0.349199 3.1:+67587122 None:intergenic
TGGTCAAAACAACGTAAAAT+AGG 0.356556 3.1:-67587082 MS.gene70542:CDS
GAGACCTTGTTGTGAATTCA+TGG 0.365088 3.1:+67587056 None:intergenic
ATCATTGTTGGCGGCATGCT+TGG 0.372540 3.1:+67586322 None:intergenic
GTCCACAAAAGAGTTCAAAA+TGG 0.376346 3.1:-67585933 MS.gene70542:CDS
ATGTGTTGCCGGACGGAACT+AGG 0.390227 3.1:-67586301 MS.gene70542:CDS
TTTCTTACGGCTTATATGGC+TGG 0.398987 3.1:-67585972 MS.gene70542:CDS
GCCTGTATCTATTGACCAAC+CGG 0.407542 3.1:-67586006 MS.gene70542:CDS
ACTATCAATTCCTCTTGGCT+TGG 0.414384 3.1:+67586497 None:intergenic
AAATCAAATGAATCGGTGAA+TGG 0.429388 3.1:+67586792 None:intergenic
TGAGATAAGGCAACCAATGA+TGG 0.433114 3.1:+67587342 None:intergenic
AAGTTGTGAAGTGTGAAATA+TGG 0.433755 3.1:+67587389 None:intergenic
CCTCCTTCATACCCCATCAT+TGG 0.436534 3.1:-67587355 MS.gene70542:CDS
TGCGGCATATTCAATGTAGA+TGG 0.439908 3.1:-67587112 MS.gene70542:CDS
GCCATATAAGCCGTAAGAAA+AGG 0.445292 3.1:+67585975 None:intergenic
GGAACGTATGGCCGCAAAAT+GGG 0.445591 3.1:-67585912 MS.gene70542:CDS
CGCCAACAATGATGTGTTGC+CGG 0.445745 3.1:-67586312 MS.gene70542:CDS
GTTGAGTGTAGAAATCTAGA+AGG 0.447366 3.1:+67587299 None:intergenic
GGGGAGGATGGAGGCCCTAT+GGG 0.456336 3.1:-67586237 MS.gene70542:CDS
GTCCGGCAACACATCATTGT+TGG 0.456658 3.1:+67586310 None:intergenic
AGTGAAAGAAATAATGTTAG+TGG 0.459504 3.1:-67586659 MS.gene70542:CDS
GGATTGTTTGAGTTGGAGAT+TGG 0.460295 3.1:+67587269 None:intergenic
TCCTTATGGGATGGGGAGGA+TGG 0.462401 3.1:-67586249 MS.gene70542:CDS
CCCAAGACAGACTCTTGGAC+CGG 0.464123 3.1:+67586094 None:intergenic
GTTGTATCCACCGGTGGCGT+GGG 0.469782 3.1:-67586348 MS.gene70542:CDS
ATCTTCCAAATCAAATGAAT+CGG 0.475185 3.1:+67586785 None:intergenic
TGATTTGTTGACAAAGTTGT+TGG 0.479366 3.1:-67586633 MS.gene70542:CDS
AGGCCCTATGGGGTAAAGAT+TGG 0.481535 3.1:-67586226 MS.gene70542:CDS
AATCAAATGAATCGGTGAAT+GGG 0.481569 3.1:+67586793 None:intergenic
GAGAGGGTTGGCGGTTATGA+TGG 0.481620 3.1:+67587219 None:intergenic
GATTGTTTGAGTTGGAGATT+GGG 0.483049 3.1:+67587270 None:intergenic
ACCGGTTGGTCAATAGATAC+AGG 0.486135 3.1:+67586005 None:intergenic
GGTTGGCGGTTATGATGGTT+CGG 0.489026 3.1:+67587224 None:intergenic
TCTTTCCCAAGACAGACTCT+TGG 0.491988 3.1:+67586089 None:intergenic
TCCATCCTCCCCATCCCATA+AGG 0.493189 3.1:+67586248 None:intergenic
TAGAAGCTAATTCAAGCAAT+GGG 0.496987 3.1:+67586981 None:intergenic
TTCTCTTGAAGAGAAGGAAG+AGG 0.497147 3.1:+67587437 None:intergenic
TTCGACATTGAGAGGGTTGG+CGG 0.498527 3.1:+67587210 None:intergenic
AGAGCGGTGGTTTAATGAAC+CGG 0.499318 3.1:-67586189 MS.gene70542:CDS
CCGGTCCAAGAGTCTGTCTT+GGG 0.499909 3.1:-67586094 MS.gene70542:CDS
AATTTCGCCAACTTCCCTAA+AGG 0.501286 3.1:-67587172 MS.gene70542:CDS
CATTCCAATCTTTACCCCAT+AGG 0.501351 3.1:+67586222 None:intergenic
TGAAATCATGGTGAGAGATA+TGG 0.509926 3.1:-67586597 MS.gene70542:CDS
GCGCGCCGAGGCGGTTGATG+AGG 0.510855 3.1:+67587248 None:intergenic
GGTTGTATCCACCGGTGGCG+TGG 0.510914 3.1:-67586349 MS.gene70542:CDS
CTTACGGCTTATATGGCTGG+TGG 0.513738 3.1:-67585969 MS.gene70542:CDS
CAACCAATGATGGGGTATGA+AGG 0.520012 3.1:+67587352 None:intergenic
GTCAATGAGGTTGTATCCAC+CGG 0.522300 3.1:-67586357 MS.gene70542:CDS
ATCAAGAGGGTGCTTAATGT+AGG 0.522695 3.1:-67586764 MS.gene70542:CDS
ATTCCAATCTTTACCCCATA+GGG 0.522750 3.1:+67586223 None:intergenic
GAGATAAGGCAACCAATGAT+GGG 0.525247 3.1:+67587343 None:intergenic
TTGATGAGGATTGTTTGAGT+TGG 0.526092 3.1:+67587262 None:intergenic
GGAGCGTATTGCACTTATCT+CGG 0.526241 3.1:+67586814 None:intergenic
AGAGTTCAAAATGGAACGTA+TGG 0.527586 3.1:-67585924 MS.gene70542:CDS
GCCGGTCCAAGAGTCTGTCT+TGG 0.527649 3.1:-67586095 MS.gene70542:CDS
GGTTCATTAAACCACCGCTC+TGG 0.529404 3.1:+67586191 None:intergenic
TGCTTGGAATCCCACGCCAC+CGG 0.531138 3.1:+67586338 None:intergenic
TTACGGCTTATATGGCTGGT+GGG 0.532263 3.1:-67585968 MS.gene70542:CDS
CCAATGATGGGGTATGAAGG+AGG 0.532715 3.1:+67587355 None:intergenic
GACGGAACTAGGGTTGGAAA+AGG 0.534176 3.1:-67586290 MS.gene70542:CDS
GTATTATTCTCTTGAAGAGA+AGG 0.534368 3.1:+67587431 None:intergenic
TGACAAAGTTGTTGGAAGGA+GGG 0.534427 3.1:-67586625 MS.gene70542:CDS
ATTGATAGTAAAAGGAGTGA+GGG 0.534790 3.1:-67586483 MS.gene70542:CDS
AAGGAGGTAATAATAACGAC+GGG 0.535915 3.1:-67586160 MS.gene70542:CDS
TTATTACCTCCTTCTCCGAC+CGG 0.537195 3.1:+67586170 None:intergenic
TTGACAAAGTTGTTGGAAGG+AGG 0.537337 3.1:-67586626 MS.gene70542:CDS
CAATGATGGGGTATGAAGGA+GGG 0.539659 3.1:+67587356 None:intergenic
AGGATGTATTCGACATTGAG+AGG 0.544989 3.1:+67587202 None:intergenic
TTAGAAGCTAATTCAAGCAA+TGG 0.545493 3.1:+67586980 None:intergenic
TTATGGGATGGGGAGGATGG+AGG 0.547320 3.1:-67586246 MS.gene70542:CDS
GTGAAAGAAATAATGTTAGT+GGG 0.548453 3.1:-67586658 MS.gene70542:CDS
TCGCTAAGAATTTCAGTGAA+GGG 0.548678 3.1:+67587145 None:intergenic
TTTCCAACCCTAGTTCCGTC+CGG 0.551868 3.1:+67586293 None:intergenic
AATTGATAGTAAAAGGAGTG+AGG 0.554403 3.1:-67586484 MS.gene70542:CDS
GGGAGGATGGAGGCCCTATG+GGG 0.554449 3.1:-67586236 MS.gene70542:CDS
TTTAATGAACCGGTCGGAGA+AGG 0.555871 3.1:-67586179 MS.gene70542:CDS
TGGTTCGGCGCGCGCCGAGG+CGG 0.560416 3.1:+67587239 None:intergenic
CGACGTCGGCGGCAATGACG+TGG 0.561968 3.1:-67586544 MS.gene70542:CDS
GCTGACAAAAGTGGTGGCAA+AGG 0.562965 3.1:+67586851 None:intergenic
CATCTTGCATGTCAATAACA+TGG 0.564610 3.1:+67586951 None:intergenic
TATTCAAATGGAATATGTCG+TGG 0.564798 3.1:-67586057 MS.gene70542:CDS
GTATTCGACATTGAGAGGGT+TGG 0.566083 3.1:+67587207 None:intergenic
TGATGGTTCGGCGCGCGCCG+AGG 0.570570 3.1:+67587236 None:intergenic
TCAAGAGGGTGCTTAATGTA+GGG 0.570846 3.1:-67586763 MS.gene70542:CDS
ATTTGATTTGGAAGATCAAG+AGG 0.571670 3.1:-67586778 MS.gene70542:CDS
TGGCCGCAAAATGGGAGCAT+AGG 0.573339 3.1:-67585904 None:intergenic
TTGCCGGACGGAACTAGGGT+TGG 0.573574 3.1:-67586296 MS.gene70542:CDS
TTGTCGAACGCTGACAAAAG+TGG 0.574609 3.1:+67586842 None:intergenic
AACAATGATGTGTTGCCGGA+CGG 0.575536 3.1:-67586308 MS.gene70542:CDS
AGGAGGGCATGATGAAATCA+TGG 0.577588 3.1:-67586609 MS.gene70542:CDS
CTTGTTTGTGTGAGTCAATG+AGG 0.578710 3.1:-67586370 MS.gene70542:CDS
CGGCAACACATCATTGTTGG+CGG 0.585858 3.1:+67586313 None:intergenic
AATGAACCGGTCGGAGAAGG+AGG 0.587866 3.1:-67586176 MS.gene70542:CDS
GTCGCTAAGAATTTCAGTGA+AGG 0.589215 3.1:+67587144 None:intergenic
TCAATGTAGATGGAAAGTTA+TGG 0.589687 3.1:-67587102 MS.gene70542:CDS
TGTGTTGCCGGACGGAACTA+GGG 0.594214 3.1:-67586300 MS.gene70542:CDS
GGATGTATTCGACATTGAGA+GGG 0.602263 3.1:+67587203 None:intergenic
TTGTTGACAAAGTTGTTGGA+AGG 0.603881 3.1:-67586629 MS.gene70542:CDS
AATGATGGGGTATGAAGGAG+GGG 0.610983 3.1:+67587357 None:intergenic
GTCAAATAATCCAAGCCAAG+AGG 0.618489 3.1:-67586507 MS.gene70542:CDS
ACAATCCTCATCAACCGCCT+CGG 0.621473 3.1:-67587253 MS.gene70542:CDS
TGTAGAAATCTAGAAGGCGG+TGG 0.623230 3.1:+67587305 None:intergenic
AGGGAGAGACACGACGTCGG+CGG 0.628276 3.1:-67586555 MS.gene70542:CDS
TTGGAATCCCACGCCACCGG+TGG 0.637881 3.1:+67586341 None:intergenic
TTTGATTTGGAAGATCAAGA+GGG 0.646922 3.1:-67586777 MS.gene70542:CDS
ATTGTGTGTAAAGTTTCACT+TGG 0.649353 3.1:-67586905 MS.gene70542:CDS
AGATAAGGCAACCAATGATG+GGG 0.659196 3.1:+67587344 None:intergenic
AATGAGGTTGTATCCACCGG+TGG 0.662596 3.1:-67586354 MS.gene70542:CDS
ATGAGTTTAAACCAGAGCGG+TGG 0.665689 3.1:-67586202 MS.gene70542:CDS
CGGTGGTTTAATGAACCGGT+CGG 0.668013 3.1:-67586185 MS.gene70542:CDS
GAAGGAGGTAATAATAACGA+CGG 0.673705 3.1:-67586161 MS.gene70542:CDS
TCGAACGCTGACAAAAGTGG+TGG 0.677375 3.1:+67586845 None:intergenic
GAGTGTAGAAATCTAGAAGG+CGG 0.696130 3.1:+67587302 None:intergenic
GGCAGGGAGAGACACGACGT+CGG 0.719660 3.1:-67586558 MS.gene70542:CDS
AGTCTGTCTTGGGAAAGACA+TGG 0.721405 3.1:-67586084 MS.gene70542:CDS
GGAATGAGTTTAAACCAGAG+CGG 0.732383 3.1:-67586205 MS.gene70542:CDS
TTAGATAAATCCAAACAACA+AGG 0.735335 3.1:+67586875 None:intergenic
GCAGCCATGAATTCACAACA+AGG 0.742107 3.1:-67587060 MS.gene70542:CDS
AGGAGGTAATAATAACGACG+GGG 0.780838 3.1:-67586159 MS.gene70542:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGGTTATTAGTTTTATCA+TGG - chr3.1:67586798-67586817 MS.gene70542:CDS 20.0%
! AGTGAAAGAAATAATGTTAG+TGG - chr3.1:67586718-67586737 MS.gene70542:CDS 25.0%
! ATCTTCCAAATCAAATGAAT+CGG + chr3.1:67586595-67586614 None:intergenic 25.0%
! GTGAAAGAAATAATGTTAGT+GGG - chr3.1:67586719-67586738 MS.gene70542:CDS 25.0%
! TTAGATAAATCCAAACAACA+AGG + chr3.1:67586505-67586524 None:intergenic 25.0%
!! AAGTGTGAAATATGGTTTTT+GGG + chr3.1:67585983-67586002 None:intergenic 25.0%
!! TTCTGAACCAATTTGAAATT+AGG - chr3.1:67587349-67587368 MS.gene70542:CDS 25.0%
!!! ATGAGATCTTTTGATTATGA+AGG - chr3.1:67586958-67586977 MS.gene70542:CDS 25.0%
!!! TGTTTTTGTAGAATGAGATA+AGG + chr3.1:67586051-67586070 None:intergenic 25.0%
!!! TTATTAGTTTTATCATGGCA+GGG - chr3.1:67586803-67586822 MS.gene70542:CDS 25.0%
AAATCAAATGAATCGGTGAA+TGG + chr3.1:67586588-67586607 None:intergenic 30.0%
AAGTTGTGAAGTGTGAAATA+TGG + chr3.1:67585991-67586010 None:intergenic 30.0%
AATCAAATGAATCGGTGAAT+GGG + chr3.1:67586587-67586606 None:intergenic 30.0%
AATCAGTGAACGAGATAATA+AGG - chr3.1:67586677-67586696 MS.gene70542:CDS 30.0%
ATACAGGCCTAATTTCAAAT+TGG + chr3.1:67587359-67587378 None:intergenic 30.0%
ATTGTGTGTAAAGTTTCACT+TGG - chr3.1:67586472-67586491 MS.gene70542:CDS 30.0%
GAAAAACCGAAAACTTGTAA+GGG + chr3.1:67587260-67587279 None:intergenic 30.0%
GTAAGAAAAGGAACAAAAAC+CGG + chr3.1:67587393-67587412 None:intergenic 30.0%
GTATTATTCTCTTGAAGAGA+AGG + chr3.1:67585949-67585968 None:intergenic 30.0%
TAGAAGCTAATTCAAGCAAT+GGG + chr3.1:67586399-67586418 None:intergenic 30.0%
TATTCAAATGGAATATGTCG+TGG - chr3.1:67587320-67587339 MS.gene70542:CDS 30.0%
TCAATGTAGATGGAAAGTTA+TGG - chr3.1:67586275-67586294 MS.gene70542:CDS 30.0%
TGAAAAACCGAAAACTTGTA+AGG + chr3.1:67587261-67587280 None:intergenic 30.0%
TGGTCAAAACAACGTAAAAT+AGG - chr3.1:67586295-67586314 MS.gene70542:CDS 30.0%
TTAGAAGCTAATTCAAGCAA+TGG + chr3.1:67586400-67586419 None:intergenic 30.0%
! AATTGATAGTAAAAGGAGTG+AGG - chr3.1:67586893-67586912 MS.gene70542:CDS 30.0%
! AGACATGGCTTTTATTCAAA+TGG - chr3.1:67587308-67587327 MS.gene70542:CDS 30.0%
! ATTGATAGTAAAAGGAGTGA+GGG - chr3.1:67586894-67586913 MS.gene70542:CDS 30.0%
! CAAGAGGAATTGATAGTAAA+AGG - chr3.1:67586886-67586905 MS.gene70542:CDS 30.0%
! CTTTTACTATCAATTCCTCT+TGG + chr3.1:67586888-67586907 None:intergenic 30.0%
! GAAGTGTGAAATATGGTTTT+TGG + chr3.1:67585984-67586003 None:intergenic 30.0%
! GGTTTTTGTTCCTTTTCTTA+CGG - chr3.1:67587392-67587411 MS.gene70542:CDS 30.0%
! TTCCATTTTGAACTCTTTTG+TGG + chr3.1:67587449-67587468 None:intergenic 30.0%
! TTGCTTGAATTAGCTTCTAA+TGG - chr3.1:67586400-67586419 MS.gene70542:CDS 30.0%
!! ACTTATTTTCCTTATGGGAT+GGG - chr3.1:67587120-67587139 MS.gene70542:CDS 30.0%
!! AGAGTGACTTATTTTCCTTA+TGG - chr3.1:67587114-67587133 MS.gene70542:CDS 30.0%
!! ATTCACCGATTCATTTGATT+TGG - chr3.1:67586587-67586606 MS.gene70542:CDS 30.0%
!! ATTTGATTTGGAAGATCAAG+AGG - chr3.1:67586599-67586618 MS.gene70542:CDS 30.0%
!! GAGTGACTTATTTTCCTTAT+GGG - chr3.1:67587115-67587134 MS.gene70542:CDS 30.0%
!! TGATTTGTTGACAAAGTTGT+TGG - chr3.1:67586744-67586763 MS.gene70542:CDS 30.0%
!! TTTGATTTGGAAGATCAAGA+GGG - chr3.1:67586600-67586619 MS.gene70542:CDS 30.0%
!!! GTTATTAGTTTTATCATGGC+AGG - chr3.1:67586802-67586821 MS.gene70542:CDS 30.0%
AAGGAGGTAATAATAACGAC+GGG - chr3.1:67587217-67587236 MS.gene70542:CDS 35.0%
AGAGTTCAAAATGGAACGTA+TGG - chr3.1:67587453-67587472 MS.gene70542:CDS 35.0%
ATTCCAATCTTTACCCCATA+GGG + chr3.1:67587157-67587176 None:intergenic 35.0%
CATCTTGCATGTCAATAACA+TGG + chr3.1:67586429-67586448 None:intergenic 35.0%
GAAGGAGGTAATAATAACGA+CGG - chr3.1:67587216-67587235 MS.gene70542:CDS 35.0%
GTCCACAAAAGAGTTCAAAA+TGG - chr3.1:67587444-67587463 MS.gene70542:CDS 35.0%
GTTGAGTGTAGAAATCTAGA+AGG + chr3.1:67586081-67586100 None:intergenic 35.0%
TCGCTAAGAATTTCAGTGAA+GGG + chr3.1:67586235-67586254 None:intergenic 35.0%
TGAAATCATGGTGAGAGATA+TGG - chr3.1:67586780-67586799 MS.gene70542:CDS 35.0%
TTGATGAGGATTGTTTGAGT+TGG + chr3.1:67586118-67586137 None:intergenic 35.0%
TTGTTGACAAAGTTGTTGGA+AGG - chr3.1:67586748-67586767 MS.gene70542:CDS 35.0%
! GAAATTCTTAGCGACCTTTT+AGG - chr3.1:67586241-67586260 MS.gene70542:CDS 35.0%
! TCCTTTTCTTACGGCTTATA+TGG - chr3.1:67587401-67587420 MS.gene70542:CDS 35.0%
! TTGACATGCAAGATGTTTTG+AGG - chr3.1:67586434-67586453 MS.gene70542:CDS 35.0%
!! CTTATTTTCCTTATGGGATG+GGG - chr3.1:67587121-67587140 MS.gene70542:CDS 35.0%
!! GACTTATTTTCCTTATGGGA+TGG - chr3.1:67587119-67587138 MS.gene70542:CDS 35.0%
!! GATTGTTTGAGTTGGAGATT+GGG + chr3.1:67586110-67586129 None:intergenic 35.0%
!!! AAGTTTTCGGTTTTTCAAGC+CGG - chr3.1:67587264-67587283 MS.gene70542:CDS 35.0%
AATTTCGCCAACTTCCCTAA+AGG - chr3.1:67586205-67586224 MS.gene70542:CDS 40.0%
ACTATCAATTCCTCTTGGCT+TGG + chr3.1:67586883-67586902 None:intergenic 40.0%
AGATAAGGCAACCAATGATG+GGG + chr3.1:67586036-67586055 None:intergenic 40.0%
AGGAGGTAATAATAACGACG+GGG - chr3.1:67587218-67587237 MS.gene70542:CDS 40.0%
AGGATGTATTCGACATTGAG+AGG + chr3.1:67586178-67586197 None:intergenic 40.0%
CATTCCAATCTTTACCCCAT+AGG + chr3.1:67587158-67587177 None:intergenic 40.0%
CTTGTTTGTGTGAGTCAATG+AGG - chr3.1:67587007-67587026 MS.gene70542:CDS 40.0%
GAAAAGGAACAAAAACCGGT+TGG + chr3.1:67587389-67587408 None:intergenic 40.0%
GAGATAAGGCAACCAATGAT+GGG + chr3.1:67586037-67586056 None:intergenic 40.0%
GAGTGTAGAAATCTAGAAGG+CGG + chr3.1:67586078-67586097 None:intergenic 40.0%
GCCATATAAGCCGTAAGAAA+AGG + chr3.1:67587405-67587424 None:intergenic 40.0%
GGAATGAGTTTAAACCAGAG+CGG - chr3.1:67587172-67587191 MS.gene70542:CDS 40.0%
GGATGTATTCGACATTGAGA+GGG + chr3.1:67586177-67586196 None:intergenic 40.0%
GTCAAATAATCCAAGCCAAG+AGG - chr3.1:67586870-67586889 MS.gene70542:CDS 40.0%
GTCGCTAAGAATTTCAGTGA+AGG + chr3.1:67586236-67586255 None:intergenic 40.0%
TGAATATGCCGCAACCTAAA+AGG + chr3.1:67586258-67586277 None:intergenic 40.0%
TGACAAAGTTGTTGGAAGGA+GGG - chr3.1:67586752-67586771 MS.gene70542:CDS 40.0%
TGAGATAAGGCAACCAATGA+TGG + chr3.1:67586038-67586057 None:intergenic 40.0%
TGCGGCATATTCAATGTAGA+TGG - chr3.1:67586265-67586284 MS.gene70542:CDS 40.0%
TTCTCTTGAAGAGAAGGAAG+AGG + chr3.1:67585943-67585962 None:intergenic 40.0%
TTGACAAAGTTGTTGGAAGG+AGG - chr3.1:67586751-67586770 MS.gene70542:CDS 40.0%
TTTAGGGAAGTTGGCGAAAT+TGG + chr3.1:67586206-67586225 None:intergenic 40.0%
TTTCTTACGGCTTATATGGC+TGG - chr3.1:67587405-67587424 MS.gene70542:CDS 40.0%
! AAAGGAGTGAGGGAAGTTTT+TGG - chr3.1:67586904-67586923 MS.gene70542:CDS 40.0%
! CAGTGAAGGGTTTTCCTTTA+GGG + chr3.1:67586222-67586241 None:intergenic 40.0%
! GAGACCTTGTTGTGAATTCA+TGG + chr3.1:67586324-67586343 None:intergenic 40.0%
! TCAGTGAAGGGTTTTCCTTT+AGG + chr3.1:67586223-67586242 None:intergenic 40.0%
! TGTGAGCCCTTACAAGTTTT+CGG - chr3.1:67587251-67587270 MS.gene70542:CDS 40.0%
!! ATCAAGAGGGTGCTTAATGT+AGG - chr3.1:67586613-67586632 MS.gene70542:CDS 40.0%
!! GGATTGTTTGAGTTGGAGAT+TGG + chr3.1:67586111-67586130 None:intergenic 40.0%
!! TCAAGAGGGTGCTTAATGTA+GGG - chr3.1:67586614-67586633 MS.gene70542:CDS 40.0%
!! TGGCTATGATCCTTGTTGTT+TGG - chr3.1:67586492-67586511 MS.gene70542:CDS 40.0%
!!! AGTTGGCGAAATTGGTTTTG+AGG + chr3.1:67586198-67586217 None:intergenic 40.0%
AACAATGATGTGTTGCCGGA+CGG - chr3.1:67587069-67587088 MS.gene70542:CDS 45.0%
AGAGCGGTGGTTTAATGAAC+CGG - chr3.1:67587188-67587207 MS.gene70542:CDS 45.0%
AGTCTGTCTTGGGAAAGACA+TGG - chr3.1:67587293-67587312 MS.gene70542:CDS 45.0%
ATGAGTTTAAACCAGAGCGG+TGG - chr3.1:67587175-67587194 MS.gene70542:CDS 45.0%
GCAGCCATGAATTCACAACA+AGG - chr3.1:67586317-67586336 MS.gene70542:CDS 45.0%
GCCTGTATCTATTGACCAAC+CGG - chr3.1:67587371-67587390 MS.gene70542:CDS 45.0%
GGAGCGTATTGCACTTATCT+CGG + chr3.1:67586566-67586585 None:intergenic 45.0%
GTATTCGACATTGAGAGGGT+TGG + chr3.1:67586173-67586192 None:intergenic 45.0%
GTCAATGAGGTTGTATCCAC+CGG - chr3.1:67587020-67587039 MS.gene70542:CDS 45.0%
TCTTTCCCAAGACAGACTCT+TGG + chr3.1:67587291-67587310 None:intergenic 45.0%
TGTAGAAATCTAGAAGGCGG+TGG + chr3.1:67586075-67586094 None:intergenic 45.0%
TTACGGCTTATATGGCTGGT+GGG - chr3.1:67587409-67587428 MS.gene70542:CDS 45.0%
TTATTACCTCCTTCTCCGAC+CGG + chr3.1:67587210-67587229 None:intergenic 45.0%
TTGTCGAACGCTGACAAAAG+TGG + chr3.1:67586538-67586557 None:intergenic 45.0%
TTTAATGAACCGGTCGGAGA+AGG - chr3.1:67587198-67587217 MS.gene70542:CDS 45.0%
! AATGATGGGGTATGAAGGAG+GGG + chr3.1:67586023-67586042 None:intergenic 45.0%
! ACCGGTTGGTCAATAGATAC+AGG + chr3.1:67587375-67587394 None:intergenic 45.0%
! AGGAGGGCATGATGAAATCA+TGG - chr3.1:67586768-67586787 MS.gene70542:CDS 45.0%
! ATTTTCCTTATGGGATGGGG+AGG - chr3.1:67587124-67587143 MS.gene70542:CDS 45.0%
! CAACCAATGATGGGGTATGA+AGG + chr3.1:67586028-67586047 None:intergenic 45.0%
! CAATGATGGGGTATGAAGGA+GGG + chr3.1:67586024-67586043 None:intergenic 45.0%
!! GGGTTTTCCTTTAGGGAAGT+TGG + chr3.1:67586215-67586234 None:intergenic 45.0%
!!! CTTAGCGACCTTTTAGGTTG+CGG - chr3.1:67586247-67586266 MS.gene70542:CDS 45.0%
AATGAGGTTGTATCCACCGG+TGG - chr3.1:67587023-67587042 MS.gene70542:CDS 50.0%
ACAATCCTCATCAACCGCCT+CGG - chr3.1:67586124-67586143 MS.gene70542:CDS 50.0%
AGGCCCTATGGGGTAAAGAT+TGG - chr3.1:67587151-67587170 MS.gene70542:CDS 50.0%
ATCATTGTTGGCGGCATGCT+TGG + chr3.1:67587058-67587077 None:intergenic 50.0%
CCTCCTTCATACCCCATCAT+TGG - chr3.1:67586022-67586041 MS.gene70542:CDS 50.0%
CGCCAACAATGATGTGTTGC+CGG - chr3.1:67587065-67587084 MS.gene70542:CDS 50.0%
CGGCAACACATCATTGTTGG+CGG + chr3.1:67587067-67587086 None:intergenic 50.0%
CGGTGGTTTAATGAACCGGT+CGG - chr3.1:67587192-67587211 MS.gene70542:CDS 50.0%
CTTACGGCTTATATGGCTGG+TGG - chr3.1:67587408-67587427 MS.gene70542:CDS 50.0%
GACGGAACTAGGGTTGGAAA+AGG - chr3.1:67587087-67587106 MS.gene70542:CDS 50.0%
GCTGACAAAAGTGGTGGCAA+AGG + chr3.1:67586529-67586548 None:intergenic 50.0%
GGAACGTATGGCCGCAAAAT+GGG - chr3.1:67587465-67587484 MS.gene70542:CDS 50.0%
GGTTCATTAAACCACCGCTC+TGG + chr3.1:67587189-67587208 None:intergenic 50.0%
GGTTGGCGGTTATGATGGTT+CGG + chr3.1:67586156-67586175 None:intergenic 50.0%
GTCCGGCAACACATCATTGT+TGG + chr3.1:67587070-67587089 None:intergenic 50.0%
TCGAACGCTGACAAAAGTGG+TGG + chr3.1:67586535-67586554 None:intergenic 50.0%
TGGAACGTATGGCCGCAAAA+TGG - chr3.1:67587464-67587483 MS.gene70542:CDS 50.0%
TTCGACATTGAGAGGGTTGG+CGG + chr3.1:67586170-67586189 None:intergenic 50.0%
TTTCCAACCCTAGTTCCGTC+CGG + chr3.1:67587087-67587106 None:intergenic 50.0%
! CCAATGATGGGGTATGAAGG+AGG + chr3.1:67586025-67586044 None:intergenic 50.0%
!! GGAGTGAGGGAAGTTTTTGG+AGG - chr3.1:67586907-67586926 MS.gene70542:CDS 50.0%
AATGAACCGGTCGGAGAAGG+AGG - chr3.1:67587201-67587220 MS.gene70542:CDS 55.0%
ATGTGTTGCCGGACGGAACT+AGG - chr3.1:67587076-67587095 MS.gene70542:CDS 55.0%
CCCAAGACAGACTCTTGGAC+CGG + chr3.1:67587286-67587305 None:intergenic 55.0%
CCGGTCCAAGAGTCTGTCTT+GGG - chr3.1:67587283-67587302 MS.gene70542:CDS 55.0%
CGGCAATGACGTGGCTTCTT+TGG - chr3.1:67586842-67586861 MS.gene70542:CDS 55.0%
TCCATCCTCCCCATCCCATA+AGG + chr3.1:67587132-67587151 None:intergenic 55.0%
TCCTTATGGGATGGGGAGGA+TGG - chr3.1:67587128-67587147 MS.gene70542:CDS 55.0%
TGTGTTGCCGGACGGAACTA+GGG - chr3.1:67587077-67587096 MS.gene70542:CDS 55.0%
TTATGGGATGGGGAGGATGG+AGG - chr3.1:67587131-67587150 MS.gene70542:CDS 55.0%
! GAGAGGGTTGGCGGTTATGA+TGG + chr3.1:67586161-67586180 None:intergenic 55.0%
GCCGGTCCAAGAGTCTGTCT+TGG - chr3.1:67587282-67587301 MS.gene70542:CDS 60.0%
GTTGTATCCACCGGTGGCGT+GGG - chr3.1:67587029-67587048 MS.gene70542:CDS 60.0%
TGCTTGGAATCCCACGCCAC+CGG + chr3.1:67587042-67587061 None:intergenic 60.0%
TTGCCGGACGGAACTAGGGT+TGG - chr3.1:67587081-67587100 MS.gene70542:CDS 60.0%
AGGGAGAGACACGACGTCGG+CGG - chr3.1:67586822-67586841 MS.gene70542:CDS 65.0%
GGCAGGGAGAGACACGACGT+CGG - chr3.1:67586819-67586838 MS.gene70542:CDS 65.0%
GGGAGGATGGAGGCCCTATG+GGG - chr3.1:67587141-67587160 MS.gene70542:CDS 65.0%
GGGGAGGATGGAGGCCCTAT+GGG - chr3.1:67587140-67587159 MS.gene70542:CDS 65.0%
GGTTGTATCCACCGGTGGCG+TGG - chr3.1:67587028-67587047 MS.gene70542:CDS 65.0%
TGGGGAGGATGGAGGCCCTA+TGG - chr3.1:67587139-67587158 MS.gene70542:CDS 65.0%
TTGGAATCCCACGCCACCGG+TGG + chr3.1:67587039-67587058 None:intergenic 65.0%
CGACGTCGGCGGCAATGACG+TGG - chr3.1:67586833-67586852 MS.gene70542:CDS 70.0%
! GCGCGCCGAGGCGGTTGATG+AGG + chr3.1:67586132-67586151 None:intergenic 75.0%
! TGATGGTTCGGCGCGCGCCG+AGG + chr3.1:67586144-67586163 None:intergenic 75.0%
!! TGGTTCGGCGCGCGCCGAGG+CGG + chr3.1:67586141-67586160 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 67585905 67587494 67585905 ID=MS.gene70542
chr3.1 mRNA 67585905 67587494 67585905 ID=MS.gene70542.t1;Parent=MS.gene70542
chr3.1 exon 67585905 67587494 67585905 ID=MS.gene70542.t1.exon1;Parent=MS.gene70542.t1
chr3.1 CDS 67585905 67587494 67585905 ID=cds.MS.gene70542.t1;Parent=MS.gene70542.t1
Gene Sequence

>MS.gene70542

ATGTTGTTCTACTACATTTTCTTTGCTATTATCTTCCTCTTCCTTCTCTTCAAGAGAATAATACTAACTCTCAATCCCAAAAACCATATTTCACACTTCACAACTTCTACTCACACCCCTCCTTCATACCCCATCATTGGTTGCCTTATCTCATTCTACAAAAACAGCCACCGCCTTCTAGATTTCTACACTCAACTTCTCTCCCAATCTCCAACTCAAACAATCCTCATCAACCGCCTCGGCGCGCGCCGAACCATCATAACCGCCAACCCTCTCAATGTCGAATACATCCTCAAAACCAATTTCGCCAACTTCCCTAAAGGAAAACCCTTCACTGAAATTCTTAGCGACCTTTTAGGTTGCGGCATATTCAATGTAGATGGAAAGTTATGGTCAAAACAACGTAAAATAGGCAGCCATGAATTCACAACAAGGTCTCTCAAAGACTTTGTTGCAAAGACACTTGAAGATGAAGTTCAACAAAGACTTATCCCATTGCTTGAATTAGCTTCTAATGGAAACCATGTTATTGACATGCAAGATGTTTTGAGGAGACTCACGTTTGAAATTGTGTGTAAAGTTTCACTTGGCTATGATCCTTGTTGTTTGGATTTATCTAAACCTTTGCCACCACTTTTGTCAGCGTTCGACAAAGCTTCCGAGATAAGTGCAATACGCTCCCATTCACCGATTCATTTGATTTGGAAGATCAAGAGGGTGCTTAATGTAGGGTCTGAGAAATTGCTTAAAGAAGCTGTTAAACTCGTTCATGAATCAGTGAACGAGATAATAAGGAAGAAGAAGAAAGAAATTAGTGAAAGAAATAATGTTAGTGGGAGTGATTTGTTGACAAAGTTGTTGGAAGGAGGGCATGATGAAATCATGGTGAGAGATATGGTTATTAGTTTTATCATGGCAGGGAGAGACACGACGTCGGCGGCAATGACGTGGCTTCTTTGGTTGTTGTCAAATAATCCAAGCCAAGAGGAATTGATAGTAAAAGGAGTGAGGGAAGTTTTTGGAGGAAAAAATAATGATGATGAGTTTGAGTTGATGAGATCTTTTGATTATGAAGGTTTGAAAGAGATGAAATATTTGAAAGCTTGTTTGTGTGAGTCAATGAGGTTGTATCCACCGGTGGCGTGGGATTCCAAGCATGCCGCCAACAATGATGTGTTGCCGGACGGAACTAGGGTTGGAAAAGGCGATAGAGTGACTTATTTTCCTTATGGGATGGGGAGGATGGAGGCCCTATGGGGTAAAGATTGGAATGAGTTTAAACCAGAGCGGTGGTTTAATGAACCGGTCGGAGAAGGAGGTAATAATAACGACGGGGTTTTGAAATATGTGAGCCCTTACAAGTTTTCGGTTTTTCAAGCCGGTCCAAGAGTCTGTCTTGGGAAAGACATGGCTTTTATTCAAATGGAATATGTCGTGGCTTCGATTCTGAACCAATTTGAAATTAGGCCTGTATCTATTGACCAACCGGTTTTTGTTCCTTTTCTTACGGCTTATATGGCTGGTGGGTTCAACGTGAGAGTCCACAAAAGAGTTCAAAATGGAACGTATGGCCGCAAAATGGGAGCATAG

Protein sequence

>MS.gene70542.t1

MLFYYIFFAIIFLFLLFKRIILTLNPKNHISHFTTSTHTPPSYPIIGCLISFYKNSHRLLDFYTQLLSQSPTQTILINRLGARRTIITANPLNVEYILKTNFANFPKGKPFTEILSDLLGCGIFNVDGKLWSKQRKIGSHEFTTRSLKDFVAKTLEDEVQQRLIPLLELASNGNHVIDMQDVLRRLTFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAIRSHSPIHLIWKIKRVLNVGSEKLLKEAVKLVHESVNEIIRKKKKEISERNNVSGSDLLTKLLEGGHDEIMVRDMVISFIMAGRDTTSAAMTWLLWLLSNNPSQEELIVKGVREVFGGKNNDDEFELMRSFDYEGLKEMKYLKACLCESMRLYPPVAWDSKHAANNDVLPDGTRVGKGDRVTYFPYGMGRMEALWGKDWNEFKPERWFNEPVGEGGNNNDGVLKYVSPYKFSVFQAGPRVCLGKDMAFIQMEYVVASILNQFEIRPVSIDQPVFVPFLTAYMAGGFNVRVHKRVQNGTYGRKMGA