Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83703.t1 | XP_013455455.1 | 96.1 | 358 | 14 | 0 | 1 | 358 | 74 | 431 | 1.40E-205 | 725.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83703.t1 | Q7UBC5 | 46.0 | 298 | 146 | 7 | 1 | 295 | 27 | 312 | 6.3e-66 | 252.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83703.t1 | A0A072UJ85 | 96.1 | 358 | 14 | 0 | 1 | 358 | 74 | 431 | 9.9e-206 | 725.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene83703 | 0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene83703 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene83703 | -0.832518 | 9.03E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene83703 | 0.859294 | 4.57E-63 | -1.69E-46 |
| MS.gene051387 | MS.gene83703 | 0.83167 | 1.46E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene83703 | 0.871223 | 8.05E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene83703 | 0.851645 | 7.76E-61 | -1.69E-46 |
| MS.gene051588 | MS.gene83703 | 0.802546 | 5.33E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene83703 | 0.802564 | 5.28E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene83703 | 0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene83703 | -0.85818 | 9.83E-63 | -1.69E-46 |
| MS.gene052128 | MS.gene83703 | -0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene052134 | MS.gene83703 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene83703 | 0.813194 | 2.90E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene83703 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene83703 | 0.87213 | 4.03E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene83703 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene83703 | 0.851832 | 6.86E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene83703 | 0.807165 | 5.78E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene83703 | 0.829951 | 3.86E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene83703 | 0.814281 | 1.67E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene83703 | 0.82611 | 3.25E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene83703 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene83703 | 0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene83703 | 0.816357 | 5.77E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene83703 | 0.872801 | 2.40E-67 | -1.69E-46 |
| MS.gene053836 | MS.gene83703 | 0.806494 | 8.00E-50 | -1.69E-46 |
| MS.gene053873 | MS.gene83703 | 0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene83703 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene83703 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene83703 | 0.822571 | 2.21E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene83703 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene83703 | 0.85421 | 1.43E-61 | -1.69E-46 |
| MS.gene054556 | MS.gene83703 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene054917 | MS.gene83703 | 0.821415 | 4.09E-53 | -1.69E-46 |
| MS.gene054918 | MS.gene83703 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene83703 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene83703 | 0.819355 | 1.21E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene83703 | 0.85049 | 1.64E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene83703 | 0.858312 | 8.98E-63 | -1.69E-46 |
| MS.gene055564 | MS.gene83703 | 0.821309 | 4.32E-53 | -1.69E-46 |
| MS.gene05556 | MS.gene83703 | 0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene83703 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene83703 | 0.824692 | 7.03E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene83703 | 0.824071 | 9.85E-54 | -1.69E-46 |
| MS.gene056497 | MS.gene83703 | 0.807943 | 3.95E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene83703 | 0.86951 | 2.93E-66 | -1.69E-46 |
| MS.gene056723 | MS.gene83703 | 0.839853 | 1.24E-57 | -1.69E-46 |
| MS.gene056782 | MS.gene83703 | 0.826718 | 2.33E-54 | -1.69E-46 |
| MS.gene056846 | MS.gene83703 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene83703 | 0.831494 | 1.62E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene83703 | 0.821185 | 4.62E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene83703 | 0.85716 | 1.97E-62 | -1.69E-46 |
| MS.gene057476 | MS.gene83703 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene83703 | 0.842802 | 2.07E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene83703 | 0.84516 | 4.83E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene83703 | 0.834865 | 2.34E-56 | -1.69E-46 |
| MS.gene057888 | MS.gene83703 | 0.838249 | 3.22E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene83703 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene83703 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene83703 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene83703 | 0.834636 | 2.67E-56 | -1.69E-46 |
| MS.gene05842 | MS.gene83703 | 0.802065 | 6.69E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene83703 | 0.838618 | 2.58E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene83703 | 0.84137 | 4.95E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene83703 | 0.851342 | 9.44E-61 | -1.69E-46 |
| MS.gene058995 | MS.gene83703 | 0.813448 | 2.55E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene83703 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene83703 | 0.835541 | 1.58E-56 | -1.69E-46 |
| MS.gene059082 | MS.gene83703 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene83703 | 0.828435 | 9.00E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene83703 | 0.861202 | 1.21E-63 | -1.69E-46 |
| MS.gene059462 | MS.gene83703 | 0.825142 | 5.51E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene83703 | 0.818255 | 2.16E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene83703 | 0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene83703 | 0.862761 | 4.03E-64 | -1.69E-46 |
| MS.gene060485 | MS.gene83703 | 0.813444 | 2.55E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene83703 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene83703 | 0.824253 | 8.92E-54 | -1.69E-46 |
| MS.gene061214 | MS.gene83703 | 0.804719 | 1.89E-49 | -1.69E-46 |
| MS.gene061215 | MS.gene83703 | 0.811545 | 6.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83703.t1 | MTR_4g037515 | 96.089 | 358 | 14 | 0 | 1 | 358 | 74 | 431 | 0.0 | 726 |
| MS.gene83703.t1 | MTR_3g030890 | 81.356 | 354 | 66 | 0 | 1 | 354 | 16 | 369 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83703.t1 | AT3G63510 | 73.611 | 360 | 93 | 2 | 1 | 358 | 59 | 418 | 0.0 | 566 |
| MS.gene83703.t1 | AT5G47970 | 73.504 | 351 | 92 | 1 | 1 | 350 | 17 | 367 | 0.0 | 557 |
| MS.gene83703.t1 | AT5G47970 | 73.504 | 351 | 92 | 1 | 1 | 350 | 17 | 367 | 0.0 | 557 |
| MS.gene83703.t1 | AT3G63510 | 72.829 | 357 | 95 | 2 | 5 | 359 | 30 | 386 | 0.0 | 554 |
| MS.gene83703.t1 | AT5G47970 | 78.824 | 255 | 54 | 0 | 1 | 255 | 17 | 271 | 3.03e-155 | 437 |
Find 78 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTAACGTTTACAATAAA+TGG | 0.190783 | 4.3:+62212890 | MS.gene83703:CDS |
| GACTCGGAGTTGGGAAAATA+TGG | 0.271444 | 4.3:+62213623 | MS.gene83703:CDS |
| CCAAGAGGTGGTTCCGAAAT+AGG | 0.284480 | 4.3:-62215063 | None:intergenic |
| CATCCCATCGTGCTTCAAAT+TGG | 0.309270 | 4.3:+62210847 | MS.gene83703:CDS |
| GATCTGGAAAGTCGCGTAAA+AGG | 0.315608 | 4.3:-62212871 | None:intergenic |
| GCATTAGCCCAGCTGAAAAT+AGG | 0.338887 | 4.3:+62212674 | MS.gene83703:CDS |
| TTCTGCTCAGGACAGATTCT+TGG | 0.342613 | 4.3:+62210807 | MS.gene83703:intron |
| GGTGTTGGATTCACCTATTT+CGG | 0.357154 | 4.3:+62215050 | MS.gene83703:CDS |
| TGTTCATCAAAAGGATAATC+TGG | 0.369652 | 4.3:+62210502 | MS.gene83703:CDS |
| TGAGCAGTGCCTTCCTTGAA+TGG | 0.371548 | 4.3:-62212648 | None:intergenic |
| CATGTTGATACTGCAATTTA+TGG | 0.381426 | 4.3:+62213440 | MS.gene83703:CDS |
| CTACAGCCCTTGGCATGTAT+TGG | 0.388197 | 4.3:+62213415 | MS.gene83703:intron |
| TTTATTGTAAACGTTAGATC+TGG | 0.390855 | 4.3:-62212887 | None:intergenic |
| AGCACGATGGGATGTTGTTC+CGG | 0.392842 | 4.3:-62210838 | None:intergenic |
| TACAGCCCTTGGCATGTATT+GGG | 0.399945 | 4.3:+62213416 | MS.gene83703:intron |
| GTCTATGGGGACTCGGAGTT+GGG | 0.421772 | 4.3:+62213614 | MS.gene83703:CDS |
| AGTCTATGGGGACTCGGAGT+TGG | 0.424449 | 4.3:+62213613 | MS.gene83703:CDS |
| GGTGAATCCAACACCGAGTC+AGG | 0.425646 | 4.3:-62215042 | None:intergenic |
| TGTATACAAGGAAAGTTTGT+TGG | 0.428224 | 4.3:+62211197 | MS.gene83703:intron |
| ACTGGACAGATAATCATTAC+AGG | 0.431189 | 4.3:+62210414 | MS.gene83703:CDS |
| GACCCATGTCCAGCTACTCT+TGG | 0.435847 | 4.3:-62211050 | None:intergenic |
| GTAGCTGGACATGGGTCCTT+TGG | 0.436150 | 4.3:+62211056 | MS.gene83703:CDS |
| AGCATTTCATAATCCATTCA+AGG | 0.439301 | 4.3:+62212635 | MS.gene83703:CDS |
| TGTCCAGCTACTCTTGGACT+TGG | 0.439456 | 4.3:-62211044 | None:intergenic |
| CGAGTCAGGAATTGCATCAA+TGG | 0.442274 | 4.3:-62215028 | None:intergenic |
| AGAAACAATTGTTCATCAAA+AGG | 0.455079 | 4.3:+62210493 | MS.gene83703:CDS |
| CTGTGGTCTTACACGTCGTC+AGG | 0.456193 | 4.3:+62213472 | MS.gene83703:CDS |
| GTCAATGCAGCACGAGACGC+TGG | 0.456446 | 4.3:+62213095 | MS.gene83703:CDS |
| GCACGAGACGCTGGGGCTCA+TGG | 0.457714 | 4.3:+62213104 | MS.gene83703:CDS |
| CCTATTTCGGAACCACCTCT+TGG | 0.458915 | 4.3:+62215063 | MS.gene83703:CDS |
| GTCCATTCCCAGGCACTGAA+TGG | 0.464425 | 4.3:-62214343 | None:intergenic |
| GGGGCTCATGGTGTTATGAT+TGG | 0.465783 | 4.3:+62213116 | MS.gene83703:CDS |
| TTATCTGTCCAGTCCATCAT+TGG | 0.466600 | 4.3:-62210404 | None:intergenic |
| TTCCATTCAGTGCCTGGGAA+TGG | 0.469507 | 4.3:+62214341 | MS.gene83703:CDS |
| CGCTTCCACTGTCCATTCCC+AGG | 0.476644 | 4.3:-62214353 | None:intergenic |
| TGCCCAAGTCCAAGAGTAGC+TGG | 0.480300 | 4.3:+62211041 | MS.gene83703:CDS |
| GTCCAGCTACTCTTGGACTT+GGG | 0.484487 | 4.3:-62211043 | None:intergenic |
| GTCAGTGTCAAATGTCGAAT+TGG | 0.488293 | 4.3:+62211260 | MS.gene83703:CDS |
| GTCTCATTTCAAAGCATGCT+TGG | 0.489705 | 4.3:+62210447 | MS.gene83703:CDS |
| TGCAATTCCTGACTCGGTGT+TGG | 0.513136 | 4.3:+62215035 | MS.gene83703:CDS |
| ATGGATTATGAAATGCTTAG+TGG | 0.521363 | 4.3:-62212629 | None:intergenic |
| CCCATCGTGCTTCAAATTGG+AGG | 0.528068 | 4.3:+62210850 | MS.gene83703:CDS |
| TTTACTTCAACATACTTTAG+CGG | 0.528715 | 4.3:-62212706 | None:intergenic |
| CAGATTCTTGGCATATTCGC+CGG | 0.530187 | 4.3:+62210819 | MS.gene83703:CDS |
| TCCAGGTGAATTCATATCCA+CGG | 0.531274 | 4.3:+62212591 | MS.gene83703:intron |
| CATTGATGCAATTCCTGACT+CGG | 0.531386 | 4.3:+62215029 | MS.gene83703:CDS |
| ATATATAGTCTATGGGGACT+CGG | 0.539522 | 4.3:+62213607 | MS.gene83703:CDS |
| TCAATGCAGCACGAGACGCT+GGG | 0.539672 | 4.3:+62213096 | MS.gene83703:CDS |
| ATTCGACATTTGACACTGAC+AGG | 0.541211 | 4.3:-62211257 | None:intergenic |
| TTCACGATGTCTCGCACAGT+TGG | 0.548837 | 4.3:-62213653 | None:intergenic |
| CCTCCAATTTGAAGCACGAT+GGG | 0.549764 | 4.3:-62210850 | None:intergenic |
| AAGTCTTATGCTTGACCCGA+AGG | 0.553336 | 4.3:+62211082 | MS.gene83703:CDS |
| TCAAGGAAGGCACTGCTCAA+TGG | 0.553455 | 4.3:+62212652 | MS.gene83703:CDS |
| ACATGTCCCAATACATGCCA+AGG | 0.557174 | 4.3:-62213422 | None:intergenic |
| ACAAGGAAAGTTTGTTGGTG+AGG | 0.559951 | 4.3:+62211202 | MS.gene83703:intron |
| AGTCCAAGAGTAGCTGGACA+TGG | 0.565210 | 4.3:+62211047 | MS.gene83703:CDS |
| TTTCATAATCCATTCAAGGA+AGG | 0.571399 | 4.3:+62212639 | MS.gene83703:CDS |
| GTGTTGCTCCAATGATGGAC+TGG | 0.579380 | 4.3:+62210396 | None:intergenic |
| CCCTCCAATTTGAAGCACGA+TGG | 0.587352 | 4.3:-62210851 | None:intergenic |
| AGAGGTTGTTCTATGCACAT+AGG | 0.592292 | 4.3:+62215146 | MS.gene83703:CDS |
| AGATCTGTGCGGCCAAGAGG+TGG | 0.598769 | 4.3:-62215075 | None:intergenic |
| CCATCGTGCTTCAAATTGGA+GGG | 0.602325 | 4.3:+62210851 | MS.gene83703:CDS |
| GCCATACAAAACAAGAGAAG+AGG | 0.604707 | 4.3:+62215128 | MS.gene83703:CDS |
| TGGATTATGAAATGCTTAGT+GGG | 0.605032 | 4.3:-62212628 | None:intergenic |
| AAAAGATCTGTGCGGCCAAG+AGG | 0.612147 | 4.3:-62215078 | None:intergenic |
| GTCCAAGAGTAGCTGGACAT+GGG | 0.636881 | 4.3:+62211048 | MS.gene83703:CDS |
| ACTTCAACATACTTTAGCGG+AGG | 0.641330 | 4.3:-62212703 | None:intergenic |
| CAATGCAGCACGAGACGCTG+GGG | 0.646864 | 4.3:+62213097 | MS.gene83703:CDS |
| CTAACGTTTACAATAAATGG+AGG | 0.658957 | 4.3:+62212893 | MS.gene83703:CDS |
| TGTCAAATGTCGAATTGGTG+TGG | 0.664761 | 4.3:+62211265 | MS.gene83703:CDS |
| CAGTGCCTGGGAATGGACAG+TGG | 0.665445 | 4.3:+62214348 | MS.gene83703:CDS |
| CATGTCCCAATACATGCCAA+GGG | 0.670330 | 4.3:-62213421 | None:intergenic |
| ATTTATGGTGCACAAAGCTG+TGG | 0.678668 | 4.3:+62213455 | MS.gene83703:CDS |
| GGGTGATAAAGAAGAAACCG+TGG | 0.679450 | 4.3:-62212608 | None:intergenic |
| AGGTATTACTAATGTTGATG+AGG | 0.683171 | 4.3:+62212913 | MS.gene83703:CDS |
| AAGCATAAGACTTACACCAA+AGG | 0.692742 | 4.3:-62211072 | None:intergenic |
| AACTGTGCGAGACATCGTGA+AGG | 0.727376 | 4.3:+62213655 | MS.gene83703:CDS |
| TGGACAGTGGAAGCGCAATG+CGG | 0.758211 | 4.3:+62214361 | MS.gene83703:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTGAATATTACAA+AGG | - | chr4.3:62214031-62214050 | None:intergenic | 10.0% |
| !! | AAAATATTGAATATTACAAA+GGG | - | chr4.3:62214030-62214049 | None:intergenic | 10.0% |
| !! | ATAAATTATTAAACAACAAA+TGG | - | chr4.3:62213558-62213577 | None:intergenic | 10.0% |
| !! | ATAATATATTCAATAAGTAA+TGG | - | chr4.3:62211999-62212018 | None:intergenic | 10.0% |
| !! | ATTACTTATTGAATATATTA+TGG | + | chr4.3:62211998-62212017 | MS.gene83703:intron | 10.0% |
| !! | CTTTCAAAAAAAAATAAAAA+TGG | + | chr4.3:62213954-62213973 | MS.gene83703:intron | 10.0% |
| !! | AAAACCCTAATAATAATATT+TGG | + | chr4.3:62212527-62212546 | MS.gene83703:intron | 15.0% |
| !! | AAATATTGAATATTACAAAG+GGG | - | chr4.3:62214029-62214048 | None:intergenic | 15.0% |
| !! | AGTTTCTTCTATAATAATAA+GGG | + | chr4.3:62212340-62212359 | MS.gene83703:intron | 15.0% |
| !! | ATGATCCAAATATTATTATT+AGG | - | chr4.3:62212535-62212554 | None:intergenic | 15.0% |
| !! | ATTTGAATATATTCACTAAT+AGG | - | chr4.3:62214255-62214274 | None:intergenic | 15.0% |
| !! | TAATAATAATATTTGGATCA+TGG | + | chr4.3:62212534-62212553 | MS.gene83703:intron | 15.0% |
| !! | TAGTTTCTTCTATAATAATA+AGG | + | chr4.3:62212339-62212358 | MS.gene83703:intron | 15.0% |
| !! | TGATCCAAATATTATTATTA+GGG | - | chr4.3:62212534-62212553 | None:intergenic | 15.0% |
| !! | TTGAAAAATATATAGTCTAT+GGG | + | chr4.3:62213600-62213619 | MS.gene83703:CDS | 15.0% |
| !!! | AATCTAAGAGAAAATAATTT+TGG | + | chr4.3:62212051-62212070 | MS.gene83703:intron | 15.0% |
| !!! | AGTCAATTTTTAAAGTTTTA+AGG | + | chr4.3:62213814-62213833 | MS.gene83703:intron | 15.0% |
| !!! | ATAATTTTTTACAAAATGAG+AGG | - | chr4.3:62211396-62211415 | None:intergenic | 15.0% |
| !!! | CAATGAATAGTTTTTTAATT+AGG | + | chr4.3:62212469-62212488 | MS.gene83703:intron | 15.0% |
| !!! | CCAAAAAATAAATTTTATCT+TGG | - | chr4.3:62213857-62213876 | None:intergenic | 15.0% |
| !!! | CCAAGATAAAATTTATTTTT+TGG | + | chr4.3:62213854-62213873 | MS.gene83703:intron | 15.0% |
| !!! | CTTTAAATAGTAAGTTTTTA+TGG | + | chr4.3:62212400-62212419 | MS.gene83703:intron | 15.0% |
| !!! | TTATTTTTCGTATTTACTTT+AGG | + | chr4.3:62213574-62213593 | MS.gene83703:intron | 15.0% |
| !!! | TTTATTTTTAAATATCGGAA+AGG | + | chr4.3:62214182-62214201 | MS.gene83703:intron | 15.0% |
| !! | AAAAGGCTATTCAATTTATT+AGG | + | chr4.3:62211545-62211564 | MS.gene83703:intron | 20.0% |
| !! | AAAGTGGTCAAAAAAATTAT+TGG | + | chr4.3:62214135-62214154 | MS.gene83703:intron | 20.0% |
| !! | AAGTATGTTGAAGTAAAATT+TGG | + | chr4.3:62212712-62212731 | MS.gene83703:intron | 20.0% |
| !! | AAGTGGTCAAAAAAATTATT+GGG | + | chr4.3:62214136-62214155 | MS.gene83703:intron | 20.0% |
| !! | ACACAAAATGAAAGAATAAA+TGG | - | chr4.3:62210786-62210805 | None:intergenic | 20.0% |
| !! | ATTATTATCACAAAATCCAT+TGG | + | chr4.3:62211579-62211598 | MS.gene83703:intron | 20.0% |
| !! | CAAATATTTCAACAAAAATC+AGG | - | chr4.3:62212976-62212995 | None:intergenic | 20.0% |
| !! | CAGTAAATTAAGAAAGAAAA+AGG | - | chr4.3:62214506-62214525 | None:intergenic | 20.0% |
| !! | CATATTGCTTCATATATATT+AGG | + | chr4.3:62212110-62212129 | MS.gene83703:intron | 20.0% |
| !! | CTTGAAAAATATATAGTCTA+TGG | + | chr4.3:62213599-62213618 | MS.gene83703:CDS | 20.0% |
| !! | GAAATTGCAAAATCAATTTA+AGG | - | chr4.3:62213688-62213707 | None:intergenic | 20.0% |
| !! | TAAGATGAAGAATTACTTAA+AGG | - | chr4.3:62214813-62214832 | None:intergenic | 20.0% |
| !! | TGAAAAATATATAGTCTATG+GGG | + | chr4.3:62213601-62213620 | MS.gene83703:CDS | 20.0% |
| !!! | AAATAGTTCTATGACTTTAT+AGG | - | chr4.3:62214637-62214656 | None:intergenic | 20.0% |
| !!! | AAGTACCTGTTTTTATAAAA+AGG | + | chr4.3:62214104-62214123 | MS.gene83703:intron | 20.0% |
| !!! | AGATTTTGAGATTAATAAGT+TGG | + | chr4.3:62211785-62211804 | MS.gene83703:intron | 20.0% |
| !!! | AGTTTATTTCTTATCCTTAA+AGG | + | chr4.3:62214608-62214627 | MS.gene83703:intron | 20.0% |
| !!! | ATCAGTATTTTAATAGTGAA+AGG | + | chr4.3:62214708-62214727 | MS.gene83703:intron | 20.0% |
| !!! | ATGAAGTGTTCATATTTTAT+TGG | + | chr4.3:62213986-62214005 | MS.gene83703:intron | 20.0% |
| !!! | CAGTATTTTAACATAGTTAT+GGG | + | chr4.3:62214766-62214785 | MS.gene83703:intron | 20.0% |
| !!! | CTGATTTTTGTTGAAATATT+TGG | + | chr4.3:62212974-62212993 | MS.gene83703:intron | 20.0% |
| !!! | TAAGAGAAAATAATTTTGGT+AGG | + | chr4.3:62212055-62212074 | MS.gene83703:intron | 20.0% |
| !!! | TCAGTATTTTAACATAGTTA+TGG | + | chr4.3:62214765-62214784 | MS.gene83703:intron | 20.0% |
| !!! | TGTTTTCTTTAATACCTAAT+TGG | + | chr4.3:62211606-62211625 | MS.gene83703:intron | 20.0% |
| !!! | TTTTTGTTTGAAAAATCGTA+TGG | - | chr4.3:62213192-62213211 | None:intergenic | 20.0% |
| !!! | TTTTTTTCCCTTTTATTGAA+GGG | - | chr4.3:62213255-62213274 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCCCTTTTATTGA+AGG | - | chr4.3:62213256-62213275 | None:intergenic | 20.0% |
| ! | AATTGTTTATATCATAGCAG+TGG | + | chr4.3:62210675-62210694 | MS.gene83703:intron | 25.0% |
| ! | AGAAACAATTGTTCATCAAA+AGG | + | chr4.3:62210493-62210512 | MS.gene83703:CDS | 25.0% |
| ! | AGAGAAATCTAATGTATACA+AGG | + | chr4.3:62211185-62211204 | MS.gene83703:intron | 25.0% |
| ! | AGGATCAATATAGTATCATT+GGG | + | chr4.3:62211947-62211966 | MS.gene83703:intron | 25.0% |
| ! | ATTGTTTATATCATAGCAGT+GGG | + | chr4.3:62210676-62210695 | MS.gene83703:intron | 25.0% |
| ! | CTATTGTTACAAATCGAAAT+TGG | + | chr4.3:62212174-62212193 | MS.gene83703:intron | 25.0% |
| ! | GAATGGAAAAAATTGAGTAA+AGG | - | chr4.3:62214329-62214348 | None:intergenic | 25.0% |
| ! | GATCTAACGTTTACAATAAA+TGG | + | chr4.3:62212890-62212909 | MS.gene83703:CDS | 25.0% |
| ! | GATTTGTAACAATAGTAGAT+AGG | - | chr4.3:62212169-62212188 | None:intergenic | 25.0% |
| ! | GGTTTATGATAGAACATTAT+GGG | + | chr4.3:62211818-62211837 | MS.gene83703:intron | 25.0% |
| ! | GTTATTCAATCATCAAATGT+GGG | + | chr4.3:62210742-62210761 | MS.gene83703:intron | 25.0% |
| ! | TAAGATCTAAATCACATCAT+TGG | - | chr4.3:62212314-62212333 | None:intergenic | 25.0% |
| ! | TAATAAACATATATCAGCTG+TGG | + | chr4.3:62211017-62211036 | MS.gene83703:intron | 25.0% |
| ! | TCAACTAACTATATTTCACT+TGG | - | chr4.3:62214419-62214438 | None:intergenic | 25.0% |
| ! | TGACTGAAGTCAAAAAAAAA+TGG | - | chr4.3:62214459-62214478 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.3:62211817-62211836 | MS.gene83703:intron | 25.0% |
| ! | TGTTATTCAATCATCAAATG+TGG | + | chr4.3:62210741-62210760 | MS.gene83703:intron | 25.0% |
| ! | TGTTCAAAAAAAGTCCTATA+CGG | - | chr4.3:62210639-62210658 | None:intergenic | 25.0% |
| ! | TTAAAGAAAACAGAAACCAA+TGG | - | chr4.3:62211598-62211617 | None:intergenic | 25.0% |
| ! | TTACAAAAGCTGTACTTAAA+TGG | + | chr4.3:62211498-62211517 | MS.gene83703:intron | 25.0% |
| ! | TTACATGGGATTTAGTATTT+GGG | + | chr4.3:62212229-62212248 | MS.gene83703:intron | 25.0% |
| ! | TTGCACAAACAATATTAAGA+GGG | - | chr4.3:62213354-62213373 | None:intergenic | 25.0% |
| ! | TTTACTTCAACATACTTTAG+CGG | - | chr4.3:62212709-62212728 | None:intergenic | 25.0% |
| ! | TTTATTGTAAACGTTAGATC+TGG | - | chr4.3:62212890-62212909 | None:intergenic | 25.0% |
| ! | TTTGCACAAACAATATTAAG+AGG | - | chr4.3:62213355-62213374 | None:intergenic | 25.0% |
| !! | CTTTTAGATTGCATTCAAAA+AGG | + | chr4.3:62211528-62211547 | MS.gene83703:intron | 25.0% |
| !! | GATAAGGCTATATTCTTTTA+TGG | + | chr4.3:62213770-62213789 | MS.gene83703:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4.3:62211756-62211775 | None:intergenic | 25.0% |
| !! | TAATAAGTTGGATGGAAATA+TGG | + | chr4.3:62211797-62211816 | MS.gene83703:intron | 25.0% |
| !! | TAATCTTTGTTTAGGAAATC+AGG | + | chr4.3:62211927-62211946 | MS.gene83703:intron | 25.0% |
| !! | TAGTCTACCTTTTACAAAAA+CGG | + | chr4.3:62214053-62214072 | MS.gene83703:intron | 25.0% |
| !! | TCCTTCCTTTTTATAAAAAC+AGG | - | chr4.3:62214112-62214131 | None:intergenic | 25.0% |
| !! | TGCAGATATGAATACTTTTA+CGG | + | chr4.3:62212848-62212867 | MS.gene83703:intron | 25.0% |
| !! | TTTGAGATTAATAAGTTGGA+TGG | + | chr4.3:62211789-62211808 | MS.gene83703:intron | 25.0% |
| !! | TTTTCTATCCAATGTTACAT+GGG | + | chr4.3:62212215-62212234 | MS.gene83703:intron | 25.0% |
| !!! | ACCTGTTTTTATAAAAAGGA+AGG | + | chr4.3:62214108-62214127 | MS.gene83703:intron | 25.0% |
| !!! | ACTACAATCATGATTTTTTG+TGG | + | chr4.3:62210603-62210622 | MS.gene83703:intron | 25.0% |
| !!! | ATTGACTTTTCTTTCTTTCT+TGG | - | chr4.3:62213801-62213820 | None:intergenic | 25.0% |
| !!! | CAAAAAAGTTGCTTTATTTC+AGG | + | chr4.3:62213206-62213225 | MS.gene83703:intron | 25.0% |
| !!! | CTTTAAGATTTAACGTGATA+TGG | - | chr4.3:62210959-62210978 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGAAAGAGAGTAC+AGG | - | chr4.3:62213947-62213966 | None:intergenic | 25.0% |
| AAAAATCGTATGGTCAAAAG+GGG | - | chr4.3:62213182-62213201 | None:intergenic | 30.0% | |
| AAAATCATCACCAAAGCTTA+AGG | + | chr4.3:62213272-62213291 | MS.gene83703:intron | 30.0% | |
| AATATTTGGATCATGGTTTC+TGG | + | chr4.3:62212541-62212560 | MS.gene83703:intron | 30.0% | |
| AGAAATTTCCAGAGAACAAA+AGG | - | chr4.3:62213716-62213735 | None:intergenic | 30.0% | |
| AGCATTTCATAATCCATTCA+AGG | + | chr4.3:62212635-62212654 | MS.gene83703:CDS | 30.0% | |
| AGCATTTCCCTTCAATAAAA+GGG | + | chr4.3:62213245-62213264 | MS.gene83703:intron | 30.0% | |
| AGGTATTACTAATGTTGATG+AGG | + | chr4.3:62212913-62212932 | MS.gene83703:CDS | 30.0% | |
| ATATAATAGCAGCTAATTGG+AGG | - | chr4.3:62214283-62214302 | None:intergenic | 30.0% | |
| ATATGAAGCAATATGACTCT+TGG | - | chr4.3:62212105-62212124 | None:intergenic | 30.0% | |
| ATATTTGGATCATGGTTTCT+GGG | + | chr4.3:62212542-62212561 | MS.gene83703:intron | 30.0% | |
| ATGGAAACTTGTGCATTTAA+TGG | + | chr4.3:62212419-62212438 | MS.gene83703:intron | 30.0% | |
| ATTCCTATTTATGGATGGTA+AGG | + | chr4.3:62214538-62214557 | MS.gene83703:intron | 30.0% | |
| CAGGATCAATATAGTATCAT+TGG | + | chr4.3:62211946-62211965 | MS.gene83703:intron | 30.0% | |
| CATGTTGATACTGCAATTTA+TGG | + | chr4.3:62213440-62213459 | MS.gene83703:CDS | 30.0% | |
| CTAACGTTTACAATAAATGG+AGG | + | chr4.3:62212893-62212912 | MS.gene83703:CDS | 30.0% | |
| CTTGTATGTCTACATGTATA+TGG | - | chr4.3:62212783-62212802 | None:intergenic | 30.0% | |
| CTTTAATACCTAATTGGTGT+GGG | + | chr4.3:62211612-62211631 | MS.gene83703:intron | 30.0% | |
| GAAAAATCGTATGGTCAAAA+GGG | - | chr4.3:62213183-62213202 | None:intergenic | 30.0% | |
| GACTTTATAGGATTCCTTTA+AGG | - | chr4.3:62214625-62214644 | None:intergenic | 30.0% | |
| GATCAATATAGTATCATTGG+GGG | + | chr4.3:62211949-62211968 | MS.gene83703:intron | 30.0% | |
| GCTGTAGAGATTATCAAAAA+TGG | - | chr4.3:62213402-62213421 | None:intergenic | 30.0% | |
| GGATCAATATAGTATCATTG+GGG | + | chr4.3:62211948-62211967 | MS.gene83703:intron | 30.0% | |
| GTCATATAATAGCAGCTAAT+TGG | - | chr4.3:62214286-62214305 | None:intergenic | 30.0% | |
| GTTACATGGGATTTAGTATT+TGG | + | chr4.3:62212228-62212247 | MS.gene83703:intron | 30.0% | |
| TAAAAAGGAAGGAGTAAAAG+TGG | + | chr4.3:62214119-62214138 | MS.gene83703:intron | 30.0% | |
| TACTAAATCCCATGTAACAT+TGG | - | chr4.3:62212226-62212245 | None:intergenic | 30.0% | |
| TAGCATTTCCCTTCAATAAA+AGG | + | chr4.3:62213244-62213263 | MS.gene83703:intron | 30.0% | |
| TATAACATGCTTCATGCAAA+TGG | - | chr4.3:62214230-62214249 | None:intergenic | 30.0% | |
| TATTAGCAAAAAGATCTGTG+CGG | - | chr4.3:62215089-62215108 | None:intergenic | 30.0% | |
| TCTAATTGTAACATGCTGAT+AGG | + | chr4.3:62211898-62211917 | MS.gene83703:intron | 30.0% | |
| TCTTTAATACCTAATTGGTG+TGG | + | chr4.3:62211611-62211630 | MS.gene83703:intron | 30.0% | |
| TGAAAAATCGTATGGTCAAA+AGG | - | chr4.3:62213184-62213203 | None:intergenic | 30.0% | |
| TGCACAAACAATATTAAGAG+GGG | - | chr4.3:62213353-62213372 | None:intergenic | 30.0% | |
| TGGATTATGAAATGCTTAGT+GGG | - | chr4.3:62212631-62212650 | None:intergenic | 30.0% | |
| TGTATACAAGGAAAGTTTGT+TGG | + | chr4.3:62211197-62211216 | MS.gene83703:intron | 30.0% | |
| TGTTCATCAAAAGGATAATC+TGG | + | chr4.3:62210502-62210521 | MS.gene83703:CDS | 30.0% | |
| TTACCATCCATAAATAGGAA+TGG | - | chr4.3:62214539-62214558 | None:intergenic | 30.0% | |
| TTTCATAATCCATTCAAGGA+AGG | + | chr4.3:62212639-62212658 | MS.gene83703:CDS | 30.0% | |
| ! | AACTTGTGCATTTAATGGAT+TGG | + | chr4.3:62212424-62212443 | MS.gene83703:intron | 30.0% |
| ! | ATGGATTATGAAATGCTTAG+TGG | - | chr4.3:62212632-62212651 | None:intergenic | 30.0% |
| ! | CTTTTCTATCCAATGTTACA+TGG | + | chr4.3:62212214-62212233 | MS.gene83703:intron | 30.0% |
| ! | GAACTTTTGAACTTTGTAGA+CGG | + | chr4.3:62214984-62215003 | MS.gene83703:intron | 30.0% |
| ! | GGAGTTTGTAATCTTTGTTT+AGG | + | chr4.3:62211919-62211938 | MS.gene83703:intron | 30.0% |
| ! | TGGATTGGAAATTGAAGTAT+TGG | + | chr4.3:62212439-62212458 | MS.gene83703:intron | 30.0% |
| !! | AAAGCATCCGTTTTTGTAAA+AGG | - | chr4.3:62214063-62214082 | None:intergenic | 30.0% |
| !! | ACCAAAGCTTAAGGTTTTAA+GGG | + | chr4.3:62213281-62213300 | MS.gene83703:intron | 30.0% |
| !! | AGCACTAAATTTGTTATCAC+GGG | + | chr4.3:62213005-62213024 | MS.gene83703:intron | 30.0% |
| !! | AGCTTGTTAACGAAAATGAA+CGG | + | chr4.3:62210545-62210564 | MS.gene83703:intron | 30.0% |
| !! | CAGCACTAAATTTGTTATCA+CGG | + | chr4.3:62213004-62213023 | MS.gene83703:intron | 30.0% |
| !! | TTTTGTGCCATTCCTATTTA+TGG | + | chr4.3:62214529-62214548 | MS.gene83703:intron | 30.0% |
| AAAAGGGGATTAGGTAGTTT+GGG | + | chr4.3:62211647-62211666 | MS.gene83703:intron | 35.0% | |
| AAAATCGTATGGTCAAAAGG+GGG | - | chr4.3:62213181-62213200 | None:intergenic | 35.0% | |
| AAATGTTAACGAGTTCCCTA+AGG | + | chr4.3:62212363-62212382 | MS.gene83703:intron | 35.0% | |
| AAGCATAAGACTTACACCAA+AGG | - | chr4.3:62211075-62211094 | None:intergenic | 35.0% | |
| AATGTTAACGAGTTCCCTAA+GGG | + | chr4.3:62212364-62212383 | MS.gene83703:intron | 35.0% | |
| ACTGGACAGATAATCATTAC+AGG | + | chr4.3:62210414-62210433 | MS.gene83703:CDS | 35.0% | |
| ACTTCTTAACAAATGCCCTT+AGG | + | chr4.3:62213877-62213896 | MS.gene83703:intron | 35.0% | |
| AGAATAGCTGGTATTCGATA+AGG | + | chr4.3:62213754-62213773 | MS.gene83703:intron | 35.0% | |
| AGACAGAGAATGTATGAAGA+AGG | - | chr4.3:62211325-62211344 | None:intergenic | 35.0% | |
| ATATATAGTCTATGGGGACT+CGG | + | chr4.3:62213607-62213626 | MS.gene83703:CDS | 35.0% | |
| CAAAAGCTGTACTTAAATGG+TGG | + | chr4.3:62211501-62211520 | MS.gene83703:intron | 35.0% | |
| CAATAGTAGATAGGAGATAG+TGG | - | chr4.3:62212160-62212179 | None:intergenic | 35.0% | |
| CGTGATAACAAATTTAGTGC+TGG | - | chr4.3:62213006-62213025 | None:intergenic | 35.0% | |
| CTCCTTACTACAAAATCCAA+AGG | - | chr4.3:62211688-62211707 | None:intergenic | 35.0% | |
| CTCTGTCTATCAATGTTGAA+AGG | + | chr4.3:62211337-62211356 | MS.gene83703:intron | 35.0% | |
| CTTCTTAACAAATGCCCTTA+GGG | + | chr4.3:62213878-62213897 | MS.gene83703:intron | 35.0% | |
| CTTGTTAACGAAAATGAACG+GGG | + | chr4.3:62210547-62210566 | MS.gene83703:intron | 35.0% | |
| GTTTGTGCAAAATTGCTATG+TGG | + | chr4.3:62213364-62213383 | MS.gene83703:intron | 35.0% | |
| TAACATAGTTATGGGAGAAG+TGG | + | chr4.3:62214774-62214793 | MS.gene83703:intron | 35.0% | |
| TCCCTTAAAACCTTAAGCTT+TGG | - | chr4.3:62213285-62213304 | None:intergenic | 35.0% | |
| TTAATTCATCCATGAGTGCA+TGG | + | chr4.3:62214830-62214849 | MS.gene83703:intron | 35.0% | |
| TTGGAAATGTATTAAGCTGC+AGG | - | chr4.3:62212295-62212314 | None:intergenic | 35.0% | |
| TTGTTCTGACGATTCTATCT+TGG | + | chr4.3:62213044-62213063 | MS.gene83703:intron | 35.0% | |
| ! | ATGCTTTTAGTCCCTATAGA+CGG | + | chr4.3:62214076-62214095 | MS.gene83703:intron | 35.0% |
| ! | CACCAAAGCTTAAGGTTTTA+AGG | + | chr4.3:62213280-62213299 | MS.gene83703:intron | 35.0% |
| ! | GAATACTCCTATTTTCAGCT+GGG | - | chr4.3:62212684-62212703 | None:intergenic | 35.0% |
| ! | GACCTTTGGATTTTGTAGTA+AGG | + | chr4.3:62211683-62211702 | MS.gene83703:intron | 35.0% |
| ! | GCTTGTTAACGAAAATGAAC+GGG | + | chr4.3:62210546-62210565 | MS.gene83703:intron | 35.0% |
| ! | GTACTTTTAGTCCGTCTATA+GGG | - | chr4.3:62214090-62214109 | None:intergenic | 35.0% |
| ! | TCATTTTGTGTATTCTGCTC+AGG | + | chr4.3:62210795-62210814 | MS.gene83703:intron | 35.0% |
| ! | TCTCTATCAATGCAAGTTGA+CGG | - | chr4.3:62211170-62211189 | None:intergenic | 35.0% |
| ! | TTCTTACTCCTTTTGTTCTC+TGG | + | chr4.3:62213705-62213724 | MS.gene83703:intron | 35.0% |
| ! | TTGTTCTCTGGAAATTTCTG+TGG | + | chr4.3:62213717-62213736 | MS.gene83703:intron | 35.0% |
| !! | CACTAAATTTGTTATCACGG+GGG | + | chr4.3:62213007-62213026 | MS.gene83703:intron | 35.0% |
| !! | GCACTAAATTTGTTATCACG+GGG | + | chr4.3:62213006-62213025 | MS.gene83703:intron | 35.0% |
| !! | TTGCTTTATTTCAGGAACCA+GGG | + | chr4.3:62213214-62213233 | MS.gene83703:intron | 35.0% |
| !!! | AATTTTTTCCATTCAGTGCC+TGG | + | chr4.3:62214335-62214354 | MS.gene83703:CDS | 35.0% |
| !!! | ACCTCTTCTCTTGTTTTGTA+TGG | - | chr4.3:62215132-62215151 | None:intergenic | 35.0% |
| !!! | AGCTTAAGGTTTTAAGGGAA+TGG | + | chr4.3:62213286-62213305 | MS.gene83703:intron | 35.0% |
| !!! | ATTTTTTCCATTCAGTGCCT+GGG | + | chr4.3:62214336-62214355 | MS.gene83703:CDS | 35.0% |
| !!! | TCTTCTCTTGTTTTGTATGG+CGG | - | chr4.3:62215129-62215148 | None:intergenic | 35.0% |
| !!! | TGAATTTTCTGCTGTTTTCC+AGG | + | chr4.3:62212574-62212593 | MS.gene83703:intron | 35.0% |
| AAATCGTATGGTCAAAAGGG+GGG | - | chr4.3:62213180-62213199 | None:intergenic | 40.0% | |
| ACATGCTTCATGCAAATGGA+AGG | - | chr4.3:62214226-62214245 | None:intergenic | 40.0% | |
| ACTTCAACATACTTTAGCGG+AGG | - | chr4.3:62212706-62212725 | None:intergenic | 40.0% | |
| AGAGGTTGTTCTATGCACAT+AGG | + | chr4.3:62215146-62215165 | MS.gene83703:CDS | 40.0% | |
| AGTAAGGAGAGTAGATCTCT+TGG | + | chr4.3:62211699-62211718 | MS.gene83703:intron | 40.0% | |
| AGTCTTAAACCATGCACTCA+TGG | - | chr4.3:62214842-62214861 | None:intergenic | 40.0% | |
| ATCAAAGTCCCCATGAAAAC+AGG | - | chr4.3:62213070-62213089 | None:intergenic | 40.0% | |
| ATGCTTCATGCAAATGGAAG+GGG | - | chr4.3:62214224-62214243 | None:intergenic | 40.0% | |
| ATTCGACATTTGACACTGAC+AGG | - | chr4.3:62211260-62211279 | None:intergenic | 40.0% | |
| ATTTATGGTGCACAAAGCTG+TGG | + | chr4.3:62213455-62213474 | MS.gene83703:CDS | 40.0% | |
| CATGCTTCATGCAAATGGAA+GGG | - | chr4.3:62214225-62214244 | None:intergenic | 40.0% | |
| CATTGATGCAATTCCTGACT+CGG | + | chr4.3:62215029-62215048 | MS.gene83703:CDS | 40.0% | |
| CTAATTGGTGTGGGAAAAGA+TGG | + | chr4.3:62211621-62211640 | MS.gene83703:intron | 40.0% | |
| CTCGTGTTATGTAGAATAGC+TGG | + | chr4.3:62213742-62213761 | MS.gene83703:intron | 40.0% | |
| GAAAAGGGGATTAGGTAGTT+TGG | + | chr4.3:62211646-62211665 | MS.gene83703:intron | 40.0% | |
| GCACCTTACCATCCATAAAT+AGG | - | chr4.3:62214544-62214563 | None:intergenic | 40.0% | |
| GCCATACAAAACAAGAGAAG+AGG | + | chr4.3:62215128-62215147 | MS.gene83703:CDS | 40.0% | |
| GGAAATGCTAAGTAAAACCC+TGG | - | chr4.3:62213234-62213253 | None:intergenic | 40.0% | |
| GTCAGTGTCAAATGTCGAAT+TGG | + | chr4.3:62211260-62211279 | MS.gene83703:CDS | 40.0% | |
| GTCTCATTTCAAAGCATGCT+TGG | + | chr4.3:62210447-62210466 | MS.gene83703:CDS | 40.0% | |
| GTGGTAGAGTATATCCGTAT+AGG | + | chr4.3:62210622-62210641 | MS.gene83703:intron | 40.0% | |
| TCAGGTTCATTTACACTGCT+TGG | + | chr4.3:62213490-62213509 | MS.gene83703:intron | 40.0% | |
| TCCAGGTGAATTCATATCCA+CGG | + | chr4.3:62212591-62212610 | MS.gene83703:intron | 40.0% | |
| TGTCAAATGTCGAATTGGTG+TGG | + | chr4.3:62211265-62211284 | MS.gene83703:CDS | 40.0% | |
| TGTGCAAAATTGCTATGTGG+TGG | + | chr4.3:62213367-62213386 | MS.gene83703:intron | 40.0% | |
| TGTTGAAAGGCTGTCAAGTT+TGG | + | chr4.3:62211350-62211369 | MS.gene83703:intron | 40.0% | |
| TTCATGGGGACTTTGATTGT+AGG | + | chr4.3:62213073-62213092 | MS.gene83703:intron | 40.0% | |
| TTTGCAATGTTGCAGTAGCT+AGG | + | chr4.3:62214875-62214894 | MS.gene83703:intron | 40.0% | |
| TTTGTTAACGAGTGCCCTAA+GGG | - | chr4.3:62212510-62212529 | None:intergenic | 40.0% | |
| ! | AGCGACGATTTTCTAACCTT+CGG | - | chr4.3:62211101-62211120 | None:intergenic | 40.0% |
| ! | CATCTTTTCCCACACCAATT+AGG | - | chr4.3:62211623-62211642 | None:intergenic | 40.0% |
| ! | CTATCTTGGCCTGTTTTCAT+GGG | + | chr4.3:62213058-62213077 | MS.gene83703:intron | 40.0% |
| ! | GGAATACTCCTATTTTCAGC+TGG | - | chr4.3:62212685-62212704 | None:intergenic | 40.0% |
| ! | GGTACTTTTAGTCCGTCTAT+AGG | - | chr4.3:62214091-62214110 | None:intergenic | 40.0% |
| ! | GGTGTTGGATTCACCTATTT+CGG | + | chr4.3:62215050-62215069 | MS.gene83703:CDS | 40.0% |
| ! | GTGCCATTCCTATTTATGGA+TGG | + | chr4.3:62214533-62214552 | MS.gene83703:intron | 40.0% |
| ! | TATCTTGGCCTGTTTTCATG+GGG | + | chr4.3:62213059-62213078 | MS.gene83703:intron | 40.0% |
| ! | TCTATCTTGGCCTGTTTTCA+TGG | + | chr4.3:62213057-62213076 | MS.gene83703:intron | 40.0% |
| ! | TGGCCATGTTTTACCACAAA+GGG | - | chr4.3:62212085-62212104 | None:intergenic | 40.0% |
| ! | TTGATAATCTCTACAGCCCT+TGG | + | chr4.3:62213405-62213424 | MS.gene83703:intron | 40.0% |
| ! | TTGGCCATGTTTTACCACAA+AGG | - | chr4.3:62212086-62212105 | None:intergenic | 40.0% |
| ! | TTTTGTTAACGAGTGCCCTA+AGG | - | chr4.3:62212511-62212530 | None:intergenic | 40.0% |
| !! | AAATTTGTTATCACGGGGGT+CGG | + | chr4.3:62213011-62213030 | MS.gene83703:intron | 40.0% |
| !! | AATCCTTAAAGAGTGCCCTT+AGG | + | chr4.3:62212492-62212511 | MS.gene83703:intron | 40.0% |
| !! | ACAAGGAAAGTTTGTTGGTG+AGG | + | chr4.3:62211202-62211221 | MS.gene83703:intron | 40.0% |
| !! | ATCCTTAAAGAGTGCCCTTA+GGG | + | chr4.3:62212493-62212512 | MS.gene83703:intron | 40.0% |
| !! | GTTGCTTTATTTCAGGAACC+AGG | + | chr4.3:62213213-62213232 | MS.gene83703:intron | 40.0% |
| !! | TGGGAAAAGATGGTGGAAAA+GGG | + | chr4.3:62211631-62211650 | MS.gene83703:intron | 40.0% |
| AACGAAAATGAACGGGGAGA+AGG | + | chr4.3:62210553-62210572 | MS.gene83703:intron | 45.0% | |
| AACGGGGAGAAGGAACTAAA+AGG | + | chr4.3:62210563-62210582 | MS.gene83703:intron | 45.0% | |
| AAGGAGAGTAGATCTCTTGG+AGG | + | chr4.3:62211702-62211721 | MS.gene83703:intron | 45.0% | |
| AATGTTGCAGTAGCTAGGTC+AGG | + | chr4.3:62214880-62214899 | MS.gene83703:intron | 45.0% | |
| ACATGTCCCAATACATGCCA+AGG | - | chr4.3:62213425-62213444 | None:intergenic | 45.0% | |
| ACCGTGGATATGAATTCACC+TGG | - | chr4.3:62212595-62212614 | None:intergenic | 45.0% | |
| ACGGGGAGAAGGAACTAAAA+GGG | + | chr4.3:62210564-62210583 | MS.gene83703:intron | 45.0% | |
| ATTGGTGTGGGAAAAGATGG+TGG | + | chr4.3:62211624-62211643 | MS.gene83703:intron | 45.0% | |
| CAGATTCTTGGCATATTCGC+CGG | + | chr4.3:62210819-62210838 | MS.gene83703:CDS | 45.0% | |
| CATCCCATCGTGCTTCAAAT+TGG | + | chr4.3:62210847-62210866 | MS.gene83703:CDS | 45.0% | |
| CATGTCCCAATACATGCCAA+GGG | - | chr4.3:62213424-62213443 | None:intergenic | 45.0% | |
| CCACCCTTTGTGGTAAAACA+TGG | + | chr4.3:62212079-62212098 | MS.gene83703:intron | 45.0% | |
| CCATCGTGCTTCAAATTGGA+GGG | + | chr4.3:62210851-62210870 | MS.gene83703:CDS | 45.0% | |
| CGAGTCAGGAATTGCATCAA+TGG | - | chr4.3:62215031-62215050 | None:intergenic | 45.0% | |
| GACTCGGAGTTGGGAAAATA+TGG | + | chr4.3:62213623-62213642 | MS.gene83703:CDS | 45.0% | |
| GATCTGGAAAGTCGCGTAAA+AGG | - | chr4.3:62212874-62212893 | None:intergenic | 45.0% | |
| GCATGTAGAGAGAAGACCTT+TGG | + | chr4.3:62211669-62211688 | MS.gene83703:intron | 45.0% | |
| GCATTAGCCCAGCTGAAAAT+AGG | + | chr4.3:62212674-62212693 | MS.gene83703:CDS | 45.0% | |
| GGAGGATTGTCAATCACTAG+AGG | + | chr4.3:62211720-62211739 | MS.gene83703:intron | 45.0% | |
| GGGTGATAAAGAAGAAACCG+TGG | - | chr4.3:62212611-62212630 | None:intergenic | 45.0% | |
| TACAGCCCTTGGCATGTATT+GGG | + | chr4.3:62213416-62213435 | MS.gene83703:intron | 45.0% | |
| TTCTGCTCAGGACAGATTCT+TGG | + | chr4.3:62210807-62210826 | MS.gene83703:intron | 45.0% | |
| TTGATCCATCCCCACTTAGT+GGG | + | chr4.3:62211846-62211865 | MS.gene83703:intron | 45.0% | |
| TTGTCAATCACTAGAGGCAG+AGG | + | chr4.3:62211726-62211745 | MS.gene83703:intron | 45.0% | |
| TTTGATCCATCCCCACTTAG+TGG | + | chr4.3:62211845-62211864 | MS.gene83703:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.3:62211858-62211877 | None:intergenic | 45.0% |
| ! | AAGTCTTATGCTTGACCCGA+AGG | + | chr4.3:62211082-62211101 | MS.gene83703:CDS | 45.0% |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr4.3:62211872-62211891 | MS.gene83703:intron | 45.0% |
| ! | AGTAGATAGGAGATAGTGGC+TGG | - | chr4.3:62212156-62212175 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.3:62211859-62211878 | None:intergenic | 45.0% |
| ! | CCATGTTTTACCACAAAGGG+TGG | - | chr4.3:62212082-62212101 | None:intergenic | 45.0% |
| ! | CCTCCAATTTGAAGCACGAT+GGG | - | chr4.3:62210853-62210872 | None:intergenic | 45.0% |
| ! | GCGACGATTTTCTAACCTTC+GGG | - | chr4.3:62211100-62211119 | None:intergenic | 45.0% |
| ! | GGCTTGGTTGTTGTTGTTGT+GGG | + | chr4.3:62211873-62211892 | MS.gene83703:intron | 45.0% |
| ! | GTAGATAGGAGATAGTGGCT+GGG | - | chr4.3:62212155-62212174 | None:intergenic | 45.0% |
| ! | GTGAACTAGAGCAGTACTGA+CGG | + | chr4.3:62210716-62210735 | MS.gene83703:intron | 45.0% |
| !! | AATTTGTTATCACGGGGGTC+GGG | + | chr4.3:62213012-62213031 | MS.gene83703:intron | 45.0% |
| !! | AGATGGTGGAAAAGGGGATT+AGG | + | chr4.3:62211638-62211657 | MS.gene83703:intron | 45.0% |
| !! | AGTCCTTAAAGAGTGCCCTT+AGG | - | chr4.3:62212382-62212401 | None:intergenic | 45.0% |
| !! | GGGAAAAGATGGTGGAAAAG+GGG | + | chr4.3:62211632-62211651 | MS.gene83703:intron | 45.0% |
| !! | GTCCTTAAAGAGTGCCCTTA+GGG | - | chr4.3:62212381-62212400 | None:intergenic | 45.0% |
| !! | GTGGGAAAAGATGGTGGAAA+AGG | + | chr4.3:62211630-62211649 | MS.gene83703:intron | 45.0% |
| !! | TTCCCTAAGGGCACTCTTTA+AGG | + | chr4.3:62212376-62212395 | MS.gene83703:intron | 45.0% |
| !!! | TCTCTTGTTTTGTATGGCGG+AGG | - | chr4.3:62215126-62215145 | None:intergenic | 45.0% |
| !! | TATATATATATATCATTATA+TGG | - | chr4.3:62211441-62211460 | None:intergenic | 5.0% |
| !!! | ACTATTTTATTTTTAAATAT+CGG | + | chr4.3:62214177-62214196 | MS.gene83703:intron | 5.0% |
| AAAAGATCTGTGCGGCCAAG+AGG | - | chr4.3:62215081-62215100 | None:intergenic | 50.0% | |
| AACTGTGCGAGACATCGTGA+AGG | + | chr4.3:62213655-62213674 | MS.gene83703:CDS | 50.0% | |
| AGCACGATGGGATGTTGTTC+CGG | - | chr4.3:62210841-62210860 | None:intergenic | 50.0% | |
| AGGTGCATGCTACGGTAGTA+TGG | + | chr4.3:62214558-62214577 | MS.gene83703:intron | 50.0% | |
| AGTCCAAGAGTAGCTGGACA+TGG | + | chr4.3:62211047-62211066 | MS.gene83703:CDS | 50.0% | |
| CATCCCCACTTAGTGGGATA+AGG | + | chr4.3:62211852-62211871 | MS.gene83703:intron | 50.0% | |
| CCAAGAGGTGGTTCCGAAAT+AGG | - | chr4.3:62215066-62215085 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.3:62211857-62211876 | MS.gene83703:intron | 50.0% | |
| CCCATCGTGCTTCAAATTGG+AGG | + | chr4.3:62210850-62210869 | MS.gene83703:CDS | 50.0% | |
| CCTATTTCGGAACCACCTCT+TGG | + | chr4.3:62215063-62215082 | MS.gene83703:CDS | 50.0% | |
| CTACAGCCCTTGGCATGTAT+TGG | + | chr4.3:62213415-62213434 | MS.gene83703:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGA+TGG | - | chr4.3:62211854-62211873 | None:intergenic | 50.0% | |
| GGATGGTAAGGTGCATGCTA+CGG | + | chr4.3:62214550-62214569 | MS.gene83703:intron | 50.0% | |
| GGCTGCAGTGATAACAGACA+TGG | - | chr4.3:62214308-62214327 | None:intergenic | 50.0% | |
| GTCCAAGAGTAGCTGGACAT+GGG | + | chr4.3:62211048-62211067 | MS.gene83703:CDS | 50.0% | |
| GTCCAGCTACTCTTGGACTT+GGG | - | chr4.3:62211046-62211065 | None:intergenic | 50.0% | |
| TCATGCAAATGGAAGGGGTG+AGG | - | chr4.3:62214219-62214238 | None:intergenic | 50.0% | |
| TGAGCAGTGCCTTCCTTGAA+TGG | - | chr4.3:62212651-62212670 | None:intergenic | 50.0% | |
| TGTCCAGCTACTCTTGGACT+TGG | - | chr4.3:62211047-62211066 | None:intergenic | 50.0% | |
| TTCACGATGTCTCGCACAGT+TGG | - | chr4.3:62213656-62213675 | None:intergenic | 50.0% | |
| TTCCATTCAGTGCCTGGGAA+TGG | + | chr4.3:62214341-62214360 | MS.gene83703:CDS | 50.0% | |
| TTTGGTAGGACCACCCTTTG+TGG | + | chr4.3:62212069-62212088 | MS.gene83703:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.3:62211860-62211879 | None:intergenic | 50.0% |
| ! | CCCTCCAATTTGAAGCACGA+TGG | - | chr4.3:62210854-62210873 | None:intergenic | 50.0% |
| !! | ATTTGTTATCACGGGGGTCG+GGG | + | chr4.3:62213013-62213032 | MS.gene83703:intron | 50.0% |
| !! | GGGGCTCATGGTGTTATGAT+TGG | + | chr4.3:62213116-62213135 | MS.gene83703:CDS | 50.0% |
| !! | TCAAGGAAGGCACTGCTCAA+TGG | + | chr4.3:62212652-62212671 | MS.gene83703:CDS | 50.0% |
| !! | TGCAATTCCTGACTCGGTGT+TGG | + | chr4.3:62215035-62215054 | MS.gene83703:CDS | 50.0% |
| !! | TGCCCTAAGGGCACTCTTTA+AGG | - | chr4.3:62212498-62212517 | None:intergenic | 50.0% |
| !!! | TGGGGGCAGAGTTTTGTTCT+TGG | + | chr4.3:62211966-62211985 | MS.gene83703:intron | 50.0% |
| AGTCTATGGGGACTCGGAGT+TGG | + | chr4.3:62213613-62213632 | MS.gene83703:CDS | 55.0% | |
| CGCTTACGCATGTGCCCTAA+GGG | - | chr4.3:62213895-62213914 | None:intergenic | 55.0% | |
| GACCCATGTCCAGCTACTCT+TGG | - | chr4.3:62211053-62211072 | None:intergenic | 55.0% | |
| GCAAATGGAAGGGGTGAGGA+GGG | - | chr4.3:62214215-62214234 | None:intergenic | 55.0% | |
| GGTGAATCCAACACCGAGTC+AGG | - | chr4.3:62215045-62215064 | None:intergenic | 55.0% | |
| GTAGCTGGACATGGGTCCTT+TGG | + | chr4.3:62211056-62211075 | MS.gene83703:CDS | 55.0% | |
| GTCTATGGGGACTCGGAGTT+GGG | + | chr4.3:62213614-62213633 | MS.gene83703:CDS | 55.0% | |
| GTGCGAGACATCGTGAAGGT+GGG | + | chr4.3:62213659-62213678 | MS.gene83703:intron | 55.0% | |
| TCAATGCAGCACGAGACGCT+GGG | + | chr4.3:62213096-62213115 | MS.gene83703:CDS | 55.0% | |
| TGCAAATGGAAGGGGTGAGG+AGG | - | chr4.3:62214216-62214235 | None:intergenic | 55.0% | |
| TGCCCAAGTCCAAGAGTAGC+TGG | + | chr4.3:62211041-62211060 | MS.gene83703:CDS | 55.0% | |
| TGTGCGAGACATCGTGAAGG+TGG | + | chr4.3:62213658-62213677 | MS.gene83703:intron | 55.0% | |
| ! | CTGTGGTCTTACACGTCGTC+AGG | + | chr4.3:62213472-62213491 | MS.gene83703:CDS | 55.0% |
| ! | TGGACAGTGGAAGCGCAATG+CGG | + | chr4.3:62214361-62214380 | MS.gene83703:CDS | 55.0% |
| !! | GTCCATTCCCAGGCACTGAA+TGG | - | chr4.3:62214346-62214365 | None:intergenic | 55.0% |
| AGATCTGTGCGGCCAAGAGG+TGG | - | chr4.3:62215078-62215097 | None:intergenic | 60.0% | |
| CAATGCAGCACGAGACGCTG+GGG | + | chr4.3:62213097-62213116 | MS.gene83703:CDS | 60.0% | |
| CAGTGCCTGGGAATGGACAG+TGG | + | chr4.3:62214348-62214367 | MS.gene83703:CDS | 60.0% | |
| CGCTTCCACTGTCCATTCCC+AGG | - | chr4.3:62214356-62214375 | None:intergenic | 60.0% | |
| GCGCTTACGCATGTGCCCTA+AGG | - | chr4.3:62213896-62213915 | None:intergenic | 60.0% | |
| GTCAATGCAGCACGAGACGC+TGG | + | chr4.3:62213095-62213114 | MS.gene83703:CDS | 60.0% | |
| GCACGAGACGCTGGGGCTCA+TGG | + | chr4.3:62213104-62213123 | MS.gene83703:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 62210407 | 62215167 | 62210407 | ID=MS.gene83703 |
| chr4.3 | mRNA | 62210407 | 62215167 | 62210407 | ID=MS.gene83703.t1;Parent=MS.gene83703 |
| chr4.3 | exon | 62210407 | 62210523 | 62210407 | ID=MS.gene83703.t1.exon1;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62210407 | 62210523 | 62210407 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62210817 | 62210944 | 62210817 | ID=MS.gene83703.t1.exon2;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62210817 | 62210944 | 62210817 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62211034 | 62211103 | 62211034 | ID=MS.gene83703.t1.exon3;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62211034 | 62211103 | 62211034 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62211212 | 62211314 | 62211212 | ID=MS.gene83703.t1.exon4;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62211212 | 62211314 | 62211212 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62212596 | 62212713 | 62212596 | ID=MS.gene83703.t1.exon5;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62212596 | 62212713 | 62212596 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62212853 | 62212934 | 62212853 | ID=MS.gene83703.t1.exon6;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62212853 | 62212934 | 62212853 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62213095 | 62213156 | 62213095 | ID=MS.gene83703.t1.exon7;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62213095 | 62213156 | 62213095 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62213421 | 62213493 | 62213421 | ID=MS.gene83703.t1.exon8;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62213421 | 62213493 | 62213421 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62213596 | 62213676 | 62213596 | ID=MS.gene83703.t1.exon9;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62213596 | 62213676 | 62213596 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62214326 | 62214406 | 62214326 | ID=MS.gene83703.t1.exon10;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62214326 | 62214406 | 62214326 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| chr4.3 | exon | 62215003 | 62215167 | 62215003 | ID=MS.gene83703.t1.exon11;Parent=MS.gene83703.t1 |
| chr4.3 | CDS | 62215003 | 62215167 | 62215003 | ID=cds.MS.gene83703.t1;Parent=MS.gene83703.t1 |
| Gene Sequence |
| Protein sequence |
