Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88372.t1 | XP_003596481.1 | 99.4 | 355 | 2 | 0 | 55 | 409 | 172 | 526 | 6.60E-196 | 693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88372.t1 | Q8RWG3 | 25.4 | 319 | 212 | 7 | 56 | 357 | 418 | 727 | 1.8e-16 | 88.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88372.t1 | G7IR51 | 99.4 | 355 | 2 | 0 | 55 | 409 | 172 | 526 | 4.7e-196 | 693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene88372 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene88372 | 0.819164 | 1.34E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene88372 | 0.809932 | 1.48E-50 | -1.69E-46 |
| MS.gene049260 | MS.gene88372 | 0.827592 | 1.44E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene88372 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene88372 | 0.810625 | 1.05E-50 | -1.69E-46 |
| MS.gene049389 | MS.gene88372 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene049599 | MS.gene88372 | -0.815989 | 6.97E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene88372 | 0.872344 | 3.42E-67 | -1.69E-46 |
| MS.gene049915 | MS.gene88372 | 0.800362 | 1.49E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene88372 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene88372 | 0.856242 | 3.67E-62 | -1.69E-46 |
| MS.gene050330 | MS.gene88372 | -0.815891 | 7.33E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene88372 | 0.815138 | 1.08E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene88372 | -0.810713 | 1.01E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene88372 | 0.833097 | 6.49E-56 | -1.69E-46 |
| MS.gene050987 | MS.gene88372 | 0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene88372 | -0.826355 | 2.84E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene88372 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene88372 | 0.826221 | 3.05E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene88372 | 0.828771 | 7.47E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene88372 | 0.816549 | 5.22E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene88372 | 0.84708 | 1.45E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene88372 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene88372 | 0.810006 | 1.43E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene88372 | 0.828473 | 8.82E-55 | -1.69E-46 |
| MS.gene052302 | MS.gene88372 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene88372 | -0.86016 | 2.51E-63 | -1.69E-46 |
| MS.gene052340 | MS.gene88372 | 0.827471 | 1.54E-54 | -1.69E-46 |
| MS.gene053073 | MS.gene88372 | 0.81299 | 3.21E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene88372 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene88372 | 0.858174 | 9.87E-63 | -1.69E-46 |
| MS.gene053836 | MS.gene88372 | 0.868959 | 4.43E-66 | -1.69E-46 |
| MS.gene053907 | MS.gene88372 | 0.829429 | 5.17E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene88372 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene88372 | 0.884614 | 1.65E-71 | -1.69E-46 |
| MS.gene054942 | MS.gene88372 | 0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene88372 | 0.813505 | 2.47E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene88372 | 0.836802 | 7.56E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene88372 | 0.818245 | 2.17E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene88372 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene055712 | MS.gene88372 | 0.830465 | 2.89E-55 | -1.69E-46 |
| MS.gene055859 | MS.gene88372 | 0.803626 | 3.19E-49 | -1.69E-46 |
| MS.gene05647 | MS.gene88372 | 0.810784 | 9.70E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene88372 | 0.836078 | 1.16E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene88372 | 0.834594 | 2.74E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene88372 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene88372 | 0.820098 | 8.21E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene88372 | 0.814286 | 1.66E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene88372 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene88372 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene057754 | MS.gene88372 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene88372 | 0.852439 | 4.61E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene88372 | 0.836632 | 8.35E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene88372 | 0.815881 | 7.37E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene88372 | 0.863621 | 2.18E-64 | -1.69E-46 |
| MS.gene058276 | MS.gene88372 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene88372 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene88372 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene88372 | 0.829631 | 4.62E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene88372 | 0.831825 | 1.34E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene88372 | 0.801528 | 8.63E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene88372 | 0.82707 | 1.92E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene88372 | 0.804838 | 1.78E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene88372 | 0.84503 | 5.24E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene88372 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene88372 | 0.870407 | 1.49E-66 | -1.69E-46 |
| MS.gene059899 | MS.gene88372 | 0.998305 | 2.40E-261 | -1.69E-46 |
| MS.gene060084 | MS.gene88372 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene88372 | 0.826152 | 3.17E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene88372 | 0.822496 | 2.30E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene88372 | 0.839323 | 1.70E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene88372 | 0.812929 | 3.31E-51 | -1.69E-46 |
| MS.gene061265 | MS.gene88372 | 0.814929 | 1.20E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88372.t1 | MTR_2g081000 | 99.437 | 355 | 2 | 0 | 55 | 409 | 172 | 526 | 0.0 | 721 |
| MS.gene88372.t1 | MTR_7g064130 | 30.288 | 208 | 129 | 5 | 124 | 317 | 225 | 430 | 4.33e-19 | 89.4 |
| MS.gene88372.t1 | MTR_3g071970 | 28.458 | 253 | 156 | 7 | 56 | 291 | 426 | 670 | 2.08e-17 | 84.7 |
| MS.gene88372.t1 | MTR_2g084605 | 21.992 | 241 | 174 | 3 | 62 | 293 | 112 | 347 | 6.36e-14 | 73.2 |
| MS.gene88372.t1 | MTR_3g033620 | 26.554 | 177 | 124 | 2 | 121 | 291 | 164 | 340 | 1.41e-12 | 68.9 |
| MS.gene88372.t1 | MTR_0013s0150 | 22.689 | 238 | 167 | 4 | 64 | 292 | 102 | 331 | 6.06e-11 | 63.9 |
| MS.gene88372.t1 | MTR_4g077000 | 23.077 | 286 | 193 | 8 | 64 | 332 | 113 | 388 | 8.29e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88372.t1 | AT5G24690 | 75.281 | 356 | 82 | 3 | 55 | 409 | 171 | 521 | 0.0 | 559 |
| MS.gene88372.t1 | AT3G56140 | 25.392 | 319 | 212 | 7 | 56 | 357 | 199 | 508 | 5.38e-20 | 92.4 |
| MS.gene88372.t1 | AT3G56140 | 26.168 | 321 | 207 | 9 | 56 | 357 | 418 | 727 | 9.10e-20 | 92.0 |
| MS.gene88372.t1 | AT3G56140 | 26.168 | 321 | 207 | 9 | 56 | 357 | 418 | 727 | 9.10e-20 | 92.0 |
| MS.gene88372.t1 | AT2G40400 | 25.692 | 253 | 165 | 4 | 56 | 292 | 409 | 654 | 2.99e-18 | 87.4 |
| MS.gene88372.t1 | AT2G40400 | 25.692 | 253 | 165 | 4 | 56 | 292 | 409 | 654 | 2.99e-18 | 87.4 |
| MS.gene88372.t1 | AT2G40400 | 25.703 | 249 | 162 | 4 | 56 | 288 | 409 | 650 | 4.45e-17 | 84.0 |
| MS.gene88372.t1 | AT5G22790 | 28.019 | 207 | 136 | 5 | 124 | 317 | 209 | 415 | 2.00e-16 | 81.3 |
| MS.gene88372.t1 | AT2G37860 | 27.222 | 180 | 122 | 2 | 124 | 294 | 209 | 388 | 4.25e-15 | 77.0 |
| MS.gene88372.t1 | AT2G37860 | 27.222 | 180 | 122 | 2 | 124 | 294 | 209 | 388 | 4.25e-15 | 77.0 |
Find 105 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAGAATGCAGTTGTTTC+TGG | 0.145362 | 2.3:+17397970 | MS.gene88372:CDS |
| TTGAAATGAGCTATCCTCTT+AGG | 0.209103 | 2.3:+17397079 | MS.gene88372:CDS |
| GTTCGTCAGTTTGATGTTAT+TGG | 0.210309 | 2.3:+17397486 | MS.gene88372:CDS |
| CCTCCCCTTCCCCTCTTTAA+AGG | 0.214441 | 2.3:-17395243 | None:intergenic |
| CTTTAAAGGTCCTGTGGTTC+AGG | 0.219040 | 2.3:-17395229 | None:intergenic |
| ATGTTTATACTTTGTTTCTC+TGG | 0.233082 | 2.3:+17395266 | MS.gene88372:CDS |
| TGTTTCTGGGCTTGGTCTCT+TGG | 0.267949 | 2.3:+17397984 | MS.gene88372:CDS |
| CTCCCAAAGCTCGTCGAAAA+AGG | 0.281953 | 2.3:+17398052 | MS.gene88372:CDS |
| TTGCTAAGAATTTCACCATT+TGG | 0.287583 | 2.3:-17396187 | None:intergenic |
| AAACACTTTGGCTAAGAAAA+AGG | 0.291899 | 2.3:+17397200 | MS.gene88372:CDS |
| TGCTAAGAATTTCACCATTT+GGG | 0.301877 | 2.3:-17396186 | None:intergenic |
| CAGATCCTGCTTTCATGTAT+AGG | 0.308136 | 2.3:+17396745 | MS.gene88372:CDS |
| CTTTGTTTCTCTGGGACCTT+TGG | 0.317089 | 2.3:+17395275 | MS.gene88372:CDS |
| CTCATTTCAAATATGTTGTT+TGG | 0.318442 | 2.3:-17397066 | None:intergenic |
| AACTCCAAGCCAGGCACGTT+TGG | 0.323970 | 2.3:-17397851 | None:intergenic |
| CATGCAATGCCGTTGTTGTT+TGG | 0.334037 | 2.3:+17396974 | MS.gene88372:CDS |
| TGGATTTGCCTGCTGGATTT+CGG | 0.338280 | 2.3:+17396056 | MS.gene88372:CDS |
| CAGGGTCTTAAACGTTCAAT+TGG | 0.342316 | 2.3:+17397819 | MS.gene88372:intron |
| ACACAGCATCCACAAATTTA+CGG | 0.348932 | 2.3:-17396009 | None:intergenic |
| TGTTCTTCAGCACAGCATTC+AGG | 0.350694 | 2.3:+17397517 | MS.gene88372:CDS |
| AATGCAGTTGTTTCTGGGCT+TGG | 0.351608 | 2.3:+17397976 | MS.gene88372:CDS |
| GTTTCTGGGCTTGGTCTCTT+GGG | 0.363561 | 2.3:+17397985 | MS.gene88372:CDS |
| AGTTTACAAATCGGAAAGAT+AGG | 0.391754 | 2.3:+17396814 | MS.gene88372:CDS |
| AACAGCCATCATCCTCAAAA+TGG | 0.395533 | 2.3:+17397941 | MS.gene88372:CDS |
| CAAAGAATGCAGTTGTTTCT+GGG | 0.400070 | 2.3:+17397971 | MS.gene88372:CDS |
| TTTAAGTGCGGGTGCAGTAC+AGG | 0.403623 | 2.3:+17397167 | MS.gene88372:CDS |
| TGTTTATACTTTGTTTCTCT+GGG | 0.410990 | 2.3:+17395267 | MS.gene88372:CDS |
| TGAAATGAGCTATCCTCTTA+GGG | 0.414318 | 2.3:+17397080 | MS.gene88372:CDS |
| CTTGCTCCTTGTCGATCATA+TGG | 0.419050 | 2.3:+17397000 | MS.gene88372:CDS |
| ACTATCATGGATTTGCCTGC+TGG | 0.422360 | 2.3:+17396049 | MS.gene88372:CDS |
| TTTAAAGGTCCTGTGGTTCA+GGG | 0.423697 | 2.3:-17395228 | None:intergenic |
| GCTATTTGACCGTAAATTTG+TGG | 0.435761 | 2.3:+17396000 | MS.gene88372:intron |
| AAGCCTACTGGCAGTTGGCC+TGG | 0.440504 | 2.3:-17396216 | None:intergenic |
| ACTTCCAAACGTGCCTGGCT+TGG | 0.443805 | 2.3:+17397847 | MS.gene88372:CDS |
| TATCAAGATCTTTCATTGGC+AGG | 0.445171 | 2.3:+17396264 | MS.gene88372:CDS |
| TGCAGGTCAAATTCCCTAAG+AGG | 0.447055 | 2.3:-17397093 | None:intergenic |
| GGACTATCAAGATCTTTCAT+TGG | 0.448462 | 2.3:+17396260 | MS.gene88372:CDS |
| CTTGGTTAGCTCAGCCCAAA+TGG | 0.451387 | 2.3:+17396172 | MS.gene88372:CDS |
| GTCTGCCTCAACTCCAAGCC+AGG | 0.456238 | 2.3:-17397860 | None:intergenic |
| TGGAGTTGAGGCAGACCCAC+TGG | 0.456643 | 2.3:+17397867 | MS.gene88372:CDS |
| GAGAGACTTCCAAACGTGCC+TGG | 0.463019 | 2.3:+17397842 | MS.gene88372:CDS |
| CACATAGCAGTTGATATCTC+AGG | 0.479279 | 2.3:-17397446 | None:intergenic |
| CGGTAGGCTGCTCTGTGTGG+TGG | 0.496241 | 2.3:+17396790 | MS.gene88372:CDS |
| CTGCTATGTGGATTTGATAG+AGG | 0.504429 | 2.3:+17397459 | MS.gene88372:CDS |
| AGGGTCTTAAACGTTCAATT+GGG | 0.504991 | 2.3:+17397820 | MS.gene88372:intron |
| AGGAATATCCCCTGAACCAC+AGG | 0.505614 | 2.3:+17395219 | MS.gene88372:CDS |
| ATTTCGGCAAGCTTATGAAA+TGG | 0.506671 | 2.3:+17396072 | MS.gene88372:CDS |
| GCTGCTGAGTTGTGCATGGT+TGG | 0.511086 | 2.3:+17397144 | MS.gene88372:CDS |
| GGTCTCTTGGGCATCAAACA+AGG | 0.512113 | 2.3:+17397997 | MS.gene88372:CDS |
| TCCCCTCTTTAAAGGTCCTG+TGG | 0.517783 | 2.3:-17395235 | None:intergenic |
| TGGATGCTGTGTTGAATGAA+TGG | 0.518394 | 2.3:+17396020 | MS.gene88372:CDS |
| GGACCTTTAAAGAGGGGAAG+GGG | 0.523249 | 2.3:+17395240 | MS.gene88372:CDS |
| GGTCCTAGAGAATGGGAAAG+AGG | 0.527967 | 2.3:+17395195 | None:intergenic |
| CAAGGGAATGCAGATGTGTC+TGG | 0.532654 | 2.3:+17398015 | MS.gene88372:CDS |
| TGCATGGTTGGTTTAAGTGC+GGG | 0.537705 | 2.3:+17397156 | MS.gene88372:CDS |
| CAGGTGTGTTGCATACAGTA+TGG | 0.540495 | 2.3:-17395579 | None:intergenic |
| ACGTGCCTGGCTTGGAGTTG+AGG | 0.540692 | 2.3:+17397855 | MS.gene88372:CDS |
| CTTTAGGATTAAGCAAGAGT+GGG | 0.542954 | 2.3:+17396918 | MS.gene88372:intron |
| CCTGTGGCTACTCATACCAT+TGG | 0.543304 | 2.3:+17395598 | MS.gene88372:CDS |
| GAAATAAGCCTACTGGCAGT+TGG | 0.543973 | 2.3:-17396221 | None:intergenic |
| AGCAGTAATGCACTTGGCTA+TGG | 0.551775 | 2.3:+17397399 | MS.gene88372:CDS |
| ACTTTAGGATTAAGCAAGAG+TGG | 0.552123 | 2.3:+17396917 | MS.gene88372:intron |
| GGTAGGCTGCTCTGTGTGGT+GGG | 0.552612 | 2.3:+17396791 | MS.gene88372:CDS |
| GGGTGCATTGTCAAACACTT+TGG | 0.559747 | 2.3:+17397188 | MS.gene88372:CDS |
| AATTCTTAGCAATGAATGCC+AGG | 0.562493 | 2.3:+17396198 | MS.gene88372:CDS |
| TCGACGAGCTTTGGGAGCTG+AGG | 0.566927 | 2.3:-17398046 | None:intergenic |
| CTGAGATATCAACTGCTATG+TGG | 0.569147 | 2.3:+17397447 | MS.gene88372:CDS |
| AGAAACCTATACATGAAAGC+AGG | 0.569162 | 2.3:-17396750 | None:intergenic |
| GAACCACAGGACCTTTAAAG+AGG | 0.569377 | 2.3:+17395232 | MS.gene88372:CDS |
| TTAAGTGCGGGTGCAGTACA+GGG | 0.569520 | 2.3:+17397168 | MS.gene88372:CDS |
| TCTATTAGAGCAAGTTGCTA+CGG | 0.569531 | 2.3:+17396770 | MS.gene88372:CDS |
| CCTTTAAAGAGGGGAAGGGG+AGG | 0.571603 | 2.3:+17395243 | MS.gene88372:CDS |
| CAAGGCTGCTGAGTTGTGCA+TGG | 0.572049 | 2.3:+17397140 | MS.gene88372:CDS |
| TGAATGGCAAAGGACTATCA+TGG | 0.572451 | 2.3:+17396036 | MS.gene88372:CDS |
| TAAGCTTGCCGAAATCCAGC+AGG | 0.573123 | 2.3:-17396064 | None:intergenic |
| CATATGATCGACAAGGAGCA+AGG | 0.573804 | 2.3:-17396999 | None:intergenic |
| CAGGACCTTTAAAGAGGGGA+AGG | 0.576397 | 2.3:+17395238 | MS.gene88372:CDS |
| TCTGGGACCTTTGGCACCAG+AGG | 0.579344 | 2.3:+17395284 | MS.gene88372:CDS |
| AACCACAGGACCTTTAAAGA+GGG | 0.581237 | 2.3:+17395233 | MS.gene88372:CDS |
| TGTGGTGGGAGTTTACAAAT+CGG | 0.581274 | 2.3:+17396805 | MS.gene88372:CDS |
| AGTTCATCTGACTGAGCCAG+TGG | 0.595407 | 2.3:-17397883 | None:intergenic |
| TTAAAGGTCCTGTGGTTCAG+GGG | 0.597625 | 2.3:-17395227 | None:intergenic |
| CTAGAGAATGGGAAAGAGGA+AGG | 0.599885 | 2.3:+17395199 | None:intergenic |
| AGTGCATTACTGCTCACAGT+TGG | 0.605764 | 2.3:-17397390 | None:intergenic |
| AGAATTAACAAAGACTCCAA+TGG | 0.606918 | 2.3:-17395614 | None:intergenic |
| GTCTCTTGGGCATCAAACAA+GGG | 0.607736 | 2.3:+17397998 | MS.gene88372:CDS |
| TTAGAGCAAGTTGCTACGGT+AGG | 0.608583 | 2.3:+17396774 | MS.gene88372:CDS |
| GTGCATGGTTGGTTTAAGTG+CGG | 0.616394 | 2.3:+17397155 | MS.gene88372:CDS |
| CTACGGTAGGCTGCTCTGTG+TGG | 0.624582 | 2.3:+17396787 | MS.gene88372:CDS |
| AGGACCTTTAAAGAGGGGAA+GGG | 0.634454 | 2.3:+17395239 | MS.gene88372:CDS |
| CCAATGGTATGAGTAGCCAC+AGG | 0.634499 | 2.3:-17395598 | None:intergenic |
| CTGTGTTGAATGAATGGCAA+AGG | 0.635333 | 2.3:+17396026 | MS.gene88372:CDS |
| ATGTGGATTTGATAGAGGAA+TGG | 0.635556 | 2.3:+17397464 | MS.gene88372:CDS |
| ATTACTGCTCACAGTTGGAA+CGG | 0.641868 | 2.3:-17397385 | None:intergenic |
| ATATGATCGACAAGGAGCAA+GGG | 0.646370 | 2.3:-17396998 | None:intergenic |
| ATTTCCAGAAAACTACCGCA+AGG | 0.647382 | 2.3:+17396239 | MS.gene88372:CDS |
| TACTGTATGCAACACACCTG+TGG | 0.651676 | 2.3:+17395582 | MS.gene88372:CDS |
| ACTGTGAGCAGTAATGCACT+TGG | 0.654487 | 2.3:+17397393 | MS.gene88372:CDS |
| AAAGATCTTGATAGTCCTTG+CGG | 0.654748 | 2.3:-17396254 | None:intergenic |
| AGCAAGGGACCAAACAACAA+CGG | 0.657203 | 2.3:-17396983 | None:intergenic |
| ATGCCAGGCCAACTGCCAGT+AGG | 0.660255 | 2.3:+17396213 | MS.gene88372:CDS |
| GTTCATCTGACTGAGCCAGT+GGG | 0.661752 | 2.3:-17397882 | None:intergenic |
| GTGTTTCCATATGATCGACA+AGG | 0.689294 | 2.3:-17397006 | None:intergenic |
| ACCACAGGACCTTTAAAGAG+GGG | 0.694251 | 2.3:+17395234 | MS.gene88372:CDS |
| CATTGCATGCTGCTGCAGTG+AGG | 0.725407 | 2.3:-17396960 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAGATATAAGAAAATT+TGG | + | chr2.3:17396324-17396343 | MS.gene88372:intron | 10.0% |
| !!! | CTTTTTATGTTTTTTTTATT+TGG | + | chr2.3:17395635-17395654 | MS.gene88372:intron | 10.0% |
| !!! | TAACTAAAATTATGATTTTA+GGG | + | chr2.3:17396149-17396168 | MS.gene88372:intron | 10.0% |
| !! | AAGCTAATATAAAAATAAAG+CGG | + | chr2.3:17395405-17395424 | MS.gene88372:intron | 15.0% |
| !!! | CTAACTAAAATTATGATTTT+AGG | + | chr2.3:17396148-17396167 | MS.gene88372:intron | 15.0% |
| !!! | TATATAAAATTATTTTGCAC+AGG | + | chr2.3:17396715-17396734 | MS.gene88372:intron | 15.0% |
| !! | AAAAGATATGGAAGTTTATT+GGG | + | chr2.3:17396853-17396872 | MS.gene88372:intron | 20.0% |
| !! | AAATGTATTATGAATCCAAA+TGG | + | chr2.3:17395525-17395544 | MS.gene88372:intron | 20.0% |
| !! | CATTTATGTTATTAAATTGC+AGG | + | chr2.3:17395875-17395894 | MS.gene88372:intron | 20.0% |
| !! | TAATTAGTGAAATGATTTCT+GGG | + | chr2.3:17395324-17395343 | MS.gene88372:intron | 20.0% |
| !! | TATTTGATTAAATCTGTACA+AGG | - | chr2.3:17395559-17395578 | None:intergenic | 20.0% |
| !! | TTAATTAGTGAAATGATTTC+TGG | + | chr2.3:17395323-17395342 | MS.gene88372:intron | 20.0% |
| !!! | AAAGGTATTTGAACAAAAAT+GGG | - | chr2.3:17396405-17396424 | None:intergenic | 20.0% |
| !!! | GTTAACTTTATTTTGACTTT+AGG | + | chr2.3:17396902-17396921 | MS.gene88372:intron | 20.0% |
| !!! | TTGTCTATTTTGAAAAGATA+TGG | + | chr2.3:17396841-17396860 | MS.gene88372:intron | 20.0% |
| ! | AAAGATATGGAAGTTTATTG+GGG | + | chr2.3:17396854-17396873 | MS.gene88372:intron | 25.0% |
| ! | AAATGCCCAACTTATTTAAT+AGG | - | chr2.3:17397556-17397575 | None:intergenic | 25.0% |
| ! | AGGTAATCTCAATTATGTTT+CGG | + | chr2.3:17396284-17396303 | MS.gene88372:intron | 25.0% |
| ! | ATTCCAATACATACAAAACT+TGG | - | chr2.3:17397743-17397762 | None:intergenic | 25.0% |
| ! | ATTGGAAAGATAATCAGTTA+TGG | + | chr2.3:17395726-17395745 | MS.gene88372:intron | 25.0% |
| ! | CTCATTTCAAATATGTTGTT+TGG | - | chr2.3:17397069-17397088 | None:intergenic | 25.0% |
| ! | GAAAAGATATGGAAGTTTAT+TGG | + | chr2.3:17396852-17396871 | MS.gene88372:intron | 25.0% |
| ! | GCTGTCAATAAAGTATAAAA+AGG | - | chr2.3:17395680-17395699 | None:intergenic | 25.0% |
| ! | GTCATCAAATCTTAATATGA+TGG | + | chr2.3:17396637-17396656 | MS.gene88372:intron | 25.0% |
| ! | TGAAAGGAAACAATACTTAT+TGG | + | chr2.3:17397619-17397638 | MS.gene88372:intron | 25.0% |
| ! | TTACTTTAATATGATTCGTG+AGG | + | chr2.3:17396550-17396569 | MS.gene88372:intron | 25.0% |
| ! | TTCCTCCTATTAAATAAGTT+GGG | + | chr2.3:17397548-17397567 | MS.gene88372:intron | 25.0% |
| ! | TTTACAGTTTATGCTTGTTT+AGG | + | chr2.3:17396103-17396122 | MS.gene88372:intron | 25.0% |
| ! | TTTCCTCCTATTAAATAAGT+TGG | + | chr2.3:17397547-17397566 | MS.gene88372:intron | 25.0% |
| !! | AGATTGATGAATATTCCTTT+TGG | + | chr2.3:17396660-17396679 | MS.gene88372:intron | 25.0% |
| !! | ATGTTTATACTTTGTTTCTC+TGG | + | chr2.3:17395266-17395285 | MS.gene88372:CDS | 25.0% |
| !! | CTTTGATATAAACCATTTTG+AGG | - | chr2.3:17397956-17397975 | None:intergenic | 25.0% |
| !! | TGTTTATACTTTGTTTCTCT+GGG | + | chr2.3:17395267-17395286 | MS.gene88372:CDS | 25.0% |
| !! | TTTATCCTGAAAGTATAACA+GGG | + | chr2.3:17396506-17396525 | MS.gene88372:intron | 25.0% |
| !! | TTTATTTGAAATGTCCTACA+GGG | + | chr2.3:17397801-17397820 | MS.gene88372:intron | 25.0% |
| !!! | AAAATTATGATTTTAGGGCT+TGG | + | chr2.3:17396154-17396173 | MS.gene88372:intron | 25.0% |
| !!! | ACTATTGTTGAATTTTGATG+AGG | + | chr2.3:17397765-17397784 | MS.gene88372:intron | 25.0% |
| !!! | ACTTGGTAACATTTTCTAAA+TGG | - | chr2.3:17397726-17397745 | None:intergenic | 25.0% |
| !!! | GAAAGGTATTTGAACAAAAA+TGG | - | chr2.3:17396406-17396425 | None:intergenic | 25.0% |
| !!! | TCATAATTTTAGTTAGTACG+CGG | - | chr2.3:17396144-17396163 | None:intergenic | 25.0% |
| !!! | TTACCAAGTTTTGTATGTAT+TGG | + | chr2.3:17397737-17397756 | MS.gene88372:intron | 25.0% |
| !!! | TTTTATCCTGAAAGTATAAC+AGG | + | chr2.3:17396505-17396524 | MS.gene88372:intron | 25.0% |
| AAACACTTTGGCTAAGAAAA+AGG | + | chr2.3:17397200-17397219 | MS.gene88372:CDS | 30.0% | |
| AAATTCATGATTCAGAAGCA+AGG | - | chr2.3:17396381-17396400 | None:intergenic | 30.0% | |
| AATGCTATTGAACATAAGCT+GGG | - | chr2.3:17397249-17397268 | None:intergenic | 30.0% | |
| AGAATTAACAAAGACTCCAA+TGG | - | chr2.3:17395617-17395636 | None:intergenic | 30.0% | |
| AGTTTACAAATCGGAAAGAT+AGG | + | chr2.3:17396814-17396833 | MS.gene88372:CDS | 30.0% | |
| ATACAACAATACACTCCAAA+AGG | - | chr2.3:17396678-17396697 | None:intergenic | 30.0% | |
| ATCTGCATACAATTCATGTA+TGG | - | chr2.3:17397356-17397375 | None:intergenic | 30.0% | |
| TGCTAAGAATTTCACCATTT+GGG | - | chr2.3:17396189-17396208 | None:intergenic | 30.0% | |
| TTGCTAAGAATTTCACCATT+TGG | - | chr2.3:17396190-17396209 | None:intergenic | 30.0% | |
| TTTCCTTTCAACAGGATAAA+GGG | - | chr2.3:17397609-17397628 | None:intergenic | 30.0% | |
| TTTGATGAGGTATGTATTGA+GGG | + | chr2.3:17397778-17397797 | MS.gene88372:intron | 30.0% | |
| ! | AAGTATTGTTTCCTTTCAAC+AGG | - | chr2.3:17397617-17397636 | None:intergenic | 30.0% |
| ! | ATTTTTCCTTCCCAATAAGT+GGG | - | chr2.3:17395370-17395389 | None:intergenic | 30.0% |
| ! | GGCTATATATTTTGCTTTCA+TGG | + | chr2.3:17396527-17396546 | MS.gene88372:intron | 30.0% |
| ! | GTAACATTTTCTAAATGGAG+TGG | - | chr2.3:17397721-17397740 | None:intergenic | 30.0% |
| ! | GTTTATTTGAAATGTCCTAC+AGG | + | chr2.3:17397800-17397819 | MS.gene88372:intron | 30.0% |
| ! | TACTTTGATGACTTTGATGA+TGG | + | chr2.3:17395789-17395808 | MS.gene88372:intron | 30.0% |
| ! | TATTTTTCCTTCCCAATAAG+TGG | - | chr2.3:17395371-17395390 | None:intergenic | 30.0% |
| ! | TCTCTCATTAAGATTTTCCT+CGG | - | chr2.3:17396465-17396484 | None:intergenic | 30.0% |
| ! | TTTTGATGAGGTATGTATTG+AGG | + | chr2.3:17397777-17397796 | MS.gene88372:intron | 30.0% |
| !! | AGTTCAATGCTTTTTGTTCA+AGG | + | chr2.3:17397122-17397141 | MS.gene88372:CDS | 30.0% |
| !! | ATAAACCATTTTGAGGATGA+TGG | - | chr2.3:17397949-17397968 | None:intergenic | 30.0% |
| !! | TGTTTAGGTTGTAAAGCATA+TGG | + | chr2.3:17396118-17396137 | MS.gene88372:intron | 30.0% |
| !!! | GTATTTCAGTTTTTTACCTC+TGG | - | chr2.3:17395303-17395322 | None:intergenic | 30.0% |
| AAAAAGGATCGTACGGAAAA+AGG | + | chr2.3:17398068-17398087 | MS.gene88372:CDS | 35.0% | |
| AAGATAATCAGTTATGGTGG+TGG | + | chr2.3:17395732-17395751 | MS.gene88372:intron | 35.0% | |
| AATTCTTAGCAATGAATGCC+AGG | + | chr2.3:17396198-17396217 | MS.gene88372:CDS | 35.0% | |
| ACACAGCATCCACAAATTTA+CGG | - | chr2.3:17396012-17396031 | None:intergenic | 35.0% | |
| ACTTTGGCTAAGAAAAAGGA+AGG | + | chr2.3:17397204-17397223 | MS.gene88372:CDS | 35.0% | |
| AGAAACCTATACATGAAAGC+AGG | - | chr2.3:17396753-17396772 | None:intergenic | 35.0% | |
| AGGGTCTTAAACGTTCAATT+GGG | + | chr2.3:17397820-17397839 | MS.gene88372:intron | 35.0% | |
| ATGTGGATTTGATAGAGGAA+TGG | + | chr2.3:17397464-17397483 | MS.gene88372:CDS | 35.0% | |
| ATTTCGGCAAGCTTATGAAA+TGG | + | chr2.3:17396072-17396091 | MS.gene88372:CDS | 35.0% | |
| CTGTAGCTTCTACTATAGAA+AGG | - | chr2.3:17396423-17396442 | None:intergenic | 35.0% | |
| GAATGCTATTGAACATAAGC+TGG | - | chr2.3:17397250-17397269 | None:intergenic | 35.0% | |
| GACATCTATTCAATGTTCAC+AGG | - | chr2.3:17396583-17396602 | None:intergenic | 35.0% | |
| GCTATTTGACCGTAAATTTG+TGG | + | chr2.3:17396000-17396019 | MS.gene88372:intron | 35.0% | |
| GGAAAGATAATCAGTTATGG+TGG | + | chr2.3:17395729-17395748 | MS.gene88372:intron | 35.0% | |
| GGACTATCAAGATCTTTCAT+TGG | + | chr2.3:17396260-17396279 | MS.gene88372:CDS | 35.0% | |
| GTTCGTCAGTTTGATGTTAT+TGG | + | chr2.3:17397486-17397505 | MS.gene88372:CDS | 35.0% | |
| GTTTCCTTTCAACAGGATAA+AGG | - | chr2.3:17397610-17397629 | None:intergenic | 35.0% | |
| TAGCAACGTCTATTTCACAT+AGG | - | chr2.3:17395909-17395928 | None:intergenic | 35.0% | |
| TATAGCCCTGTTATACTTTC+AGG | - | chr2.3:17396514-17396533 | None:intergenic | 35.0% | |
| TATCAAGATCTTTCATTGGC+AGG | + | chr2.3:17396264-17396283 | MS.gene88372:CDS | 35.0% | |
| TCTATTAGAGCAAGTTGCTA+CGG | + | chr2.3:17396770-17396789 | MS.gene88372:CDS | 35.0% | |
| TGAAATGAGCTATCCTCTTA+GGG | + | chr2.3:17397080-17397099 | MS.gene88372:CDS | 35.0% | |
| TGCCCAACTTATTTAATAGG+AGG | - | chr2.3:17397553-17397572 | None:intergenic | 35.0% | |
| TTGAAATGAGCTATCCTCTT+AGG | + | chr2.3:17397079-17397098 | MS.gene88372:CDS | 35.0% | |
| ! | AAAGATCTTGATAGTCCTTG+CGG | - | chr2.3:17396257-17396276 | None:intergenic | 35.0% |
| ! | CTCTCATTAAGATTTTCCTC+GGG | - | chr2.3:17396464-17396483 | None:intergenic | 35.0% |
| ! | TCAAAGAATGCAGTTGTTTC+TGG | + | chr2.3:17397970-17397989 | MS.gene88372:CDS | 35.0% |
| ! | TCTCATTAAGATTTTCCTCG+GGG | - | chr2.3:17396463-17396482 | None:intergenic | 35.0% |
| ! | TTGAAGCATTCCCACTTATT+GGG | + | chr2.3:17395357-17395376 | MS.gene88372:intron | 35.0% |
| ! | TTTGAAGCATTCCCACTTAT+TGG | + | chr2.3:17395356-17395375 | MS.gene88372:intron | 35.0% |
| !! | ACTTTAGGATTAAGCAAGAG+TGG | + | chr2.3:17396917-17396936 | MS.gene88372:intron | 35.0% |
| !! | CAAAGAATGCAGTTGTTTCT+GGG | + | chr2.3:17397971-17397990 | MS.gene88372:CDS | 35.0% |
| !! | CTTTAGGATTAAGCAAGAGT+GGG | + | chr2.3:17396918-17396937 | MS.gene88372:intron | 35.0% |
| !! | TACAAGGTTGATACACCATT+TGG | - | chr2.3:17395543-17395562 | None:intergenic | 35.0% |
| !! | TTTTCTGGAAATAAGCCTAC+TGG | - | chr2.3:17396231-17396250 | None:intergenic | 35.0% |
| AACAGCCATCATCCTCAAAA+TGG | + | chr2.3:17397941-17397960 | MS.gene88372:CDS | 40.0% | |
| AAGACGCATACTTCTTCAAG+AGG | + | chr2.3:17395842-17395861 | MS.gene88372:intron | 40.0% | |
| ACAACACAAGGACAAAATGG+CGG | - | chr2.3:17395976-17395995 | None:intergenic | 40.0% | |
| ATATGATCGACAAGGAGCAA+GGG | - | chr2.3:17397001-17397020 | None:intergenic | 40.0% | |
| ATGATTCAGAAGCAAGGACA+TGG | - | chr2.3:17396375-17396394 | None:intergenic | 40.0% | |
| ATTACTGCTCACAGTTGGAA+CGG | - | chr2.3:17397388-17397407 | None:intergenic | 40.0% | |
| ATTTCCAGAAAACTACCGCA+AGG | + | chr2.3:17396239-17396258 | MS.gene88372:CDS | 40.0% | |
| CAGATCCTGCTTTCATGTAT+AGG | + | chr2.3:17396745-17396764 | MS.gene88372:CDS | 40.0% | |
| CAGGGTCTTAAACGTTCAAT+TGG | + | chr2.3:17397819-17397838 | MS.gene88372:intron | 40.0% | |
| CTGAGATATCAACTGCTATG+TGG | + | chr2.3:17397447-17397466 | MS.gene88372:CDS | 40.0% | |
| CTGCTATGTGGATTTGATAG+AGG | + | chr2.3:17397459-17397478 | MS.gene88372:CDS | 40.0% | |
| CTGTGTTGAATGAATGGCAA+AGG | + | chr2.3:17396026-17396045 | MS.gene88372:CDS | 40.0% | |
| GAAGTATGCGTCTTCTAAAC+AGG | - | chr2.3:17395836-17395855 | None:intergenic | 40.0% | |
| GTACCCTTTATCCTGTTGAA+AGG | + | chr2.3:17397603-17397622 | MS.gene88372:intron | 40.0% | |
| GTGTTTCCATATGATCGACA+AGG | - | chr2.3:17397009-17397028 | None:intergenic | 40.0% | |
| TAGTAGAAGCTACAGAAGAG+AGG | + | chr2.3:17396428-17396447 | MS.gene88372:intron | 40.0% | |
| TGAATGGCAAAGGACTATCA+TGG | + | chr2.3:17396036-17396055 | MS.gene88372:CDS | 40.0% | |
| TGATTCAGAAGCAAGGACAT+GGG | - | chr2.3:17396374-17396393 | None:intergenic | 40.0% | |
| TGGATGCTGTGTTGAATGAA+TGG | + | chr2.3:17396020-17396039 | MS.gene88372:CDS | 40.0% | |
| TGGCTAAGAAAAAGGAAGGA+AGG | + | chr2.3:17397208-17397227 | MS.gene88372:CDS | 40.0% | |
| TTTAAAGGTCCTGTGGTTCA+GGG | - | chr2.3:17395231-17395250 | None:intergenic | 40.0% | |
| TTTATTGACAGCTAGCCACT+GGG | + | chr2.3:17395688-17395707 | MS.gene88372:intron | 40.0% | |
| TTTCATTTGACGTCTCCTGA+AGG | + | chr2.3:17395945-17395964 | MS.gene88372:intron | 40.0% | |
| ! | AAAAAGGAAGGAAGGTGTGT+AGG | + | chr2.3:17397216-17397235 | MS.gene88372:intron | 40.0% |
| ! | AAAAGGAAGGAAGGTGTGTA+GGG | + | chr2.3:17397217-17397236 | MS.gene88372:intron | 40.0% |
| ! | AACCACAGGACCTTTAAAGA+GGG | + | chr2.3:17395233-17395252 | MS.gene88372:CDS | 40.0% |
| ! | CAAGTCTTATCAGACATGAG+AGG | - | chr2.3:17396605-17396624 | None:intergenic | 40.0% |
| ! | CACATAGCAGTTGATATCTC+AGG | - | chr2.3:17397449-17397468 | None:intergenic | 40.0% |
| ! | CTCATTAAGATTTTCCTCGG+GGG | - | chr2.3:17396462-17396481 | None:intergenic | 40.0% |
| ! | TGTGGTGGGAGTTTACAAAT+CGG | + | chr2.3:17396805-17396824 | MS.gene88372:CDS | 40.0% |
| ! | TTGAACGTTTAAGACCCTGT+AGG | - | chr2.3:17397818-17397837 | None:intergenic | 40.0% |
| !! | AGCATTGAACTCTCTTTTGC+AGG | - | chr2.3:17397113-17397132 | None:intergenic | 40.0% |
| !! | GACTTTGATGATGGTGATGA+GGG | + | chr2.3:17395798-17395817 | MS.gene88372:intron | 40.0% |
| !! | TGACTTTGATGATGGTGATG+AGG | + | chr2.3:17395797-17395816 | MS.gene88372:intron | 40.0% |
| !!! | ATCCTTTTTCGACGAGCTTT+GGG | - | chr2.3:17398057-17398076 | None:intergenic | 40.0% |
| !!! | TTTTTTACCTCTGGTGCCAA+AGG | - | chr2.3:17395294-17395313 | None:intergenic | 40.0% |
| AAAATGGCGGTCATTCCTTC+AGG | - | chr2.3:17395963-17395982 | None:intergenic | 45.0% | |
| ACTATCATGGATTTGCCTGC+TGG | + | chr2.3:17396049-17396068 | MS.gene88372:CDS | 45.0% | |
| ACTGTGAGCAGTAATGCACT+TGG | + | chr2.3:17397393-17397412 | MS.gene88372:CDS | 45.0% | |
| AGCAAGGGACCAAACAACAA+CGG | - | chr2.3:17396986-17397005 | None:intergenic | 45.0% | |
| AGCAGTAATGCACTTGGCTA+TGG | + | chr2.3:17397399-17397418 | MS.gene88372:CDS | 45.0% | |
| AGCATTCCCACTTATTGGGA+AGG | + | chr2.3:17395361-17395380 | MS.gene88372:intron | 45.0% | |
| AGTGCATTACTGCTCACAGT+TGG | - | chr2.3:17397393-17397412 | None:intergenic | 45.0% | |
| CAAATAGCTGCCACAACACA+AGG | - | chr2.3:17395988-17396007 | None:intergenic | 45.0% | |
| CAGGTGTGTTGCATACAGTA+TGG | - | chr2.3:17395582-17395601 | None:intergenic | 45.0% | |
| CATATGATCGACAAGGAGCA+AGG | - | chr2.3:17397002-17397021 | None:intergenic | 45.0% | |
| CTCGTCGAAAAAGGATCGTA+CGG | + | chr2.3:17398061-17398080 | MS.gene88372:CDS | 45.0% | |
| CTTGCTCCTTGTCGATCATA+TGG | + | chr2.3:17397000-17397019 | MS.gene88372:CDS | 45.0% | |
| CTTTATTGACAGCTAGCCAC+TGG | + | chr2.3:17395687-17395706 | MS.gene88372:intron | 45.0% | |
| GAAATAAGCCTACTGGCAGT+TGG | - | chr2.3:17396224-17396243 | None:intergenic | 45.0% | |
| GATTCAGAAGCAAGGACATG+GGG | - | chr2.3:17396373-17396392 | None:intergenic | 45.0% | |
| GCCACAACACAAGGACAAAA+TGG | - | chr2.3:17395979-17395998 | None:intergenic | 45.0% | |
| GGACATGGGGTTAAAGTTTG+AGG | - | chr2.3:17396360-17396379 | None:intergenic | 45.0% | |
| GGGTGCATTGTCAAACACTT+TGG | + | chr2.3:17397188-17397207 | MS.gene88372:CDS | 45.0% | |
| GTCTCTTGGGCATCAAACAA+GGG | + | chr2.3:17397998-17398017 | MS.gene88372:CDS | 45.0% | |
| TACTGTATGCAACACACCTG+TGG | + | chr2.3:17395582-17395601 | MS.gene88372:CDS | 45.0% | |
| TGCAGGTCAAATTCCCTAAG+AGG | - | chr2.3:17397096-17397115 | None:intergenic | 45.0% | |
| TGGATTTGCCTGCTGGATTT+CGG | + | chr2.3:17396056-17396075 | MS.gene88372:CDS | 45.0% | |
| TGTTCTTCAGCACAGCATTC+AGG | + | chr2.3:17397517-17397536 | MS.gene88372:CDS | 45.0% | |
| TTAAAGGTCCTGTGGTTCAG+GGG | - | chr2.3:17395230-17395249 | None:intergenic | 45.0% | |
| TTAGAGCAAGTTGCTACGGT+AGG | + | chr2.3:17396774-17396793 | MS.gene88372:CDS | 45.0% | |
| TTATTGACAGCTAGCCACTG+GGG | + | chr2.3:17395689-17395708 | MS.gene88372:intron | 45.0% | |
| ! | ACCACAGGACCTTTAAAGAG+GGG | + | chr2.3:17395234-17395253 | MS.gene88372:CDS | 45.0% |
| ! | AGGACCTTTAAAGAGGGGAA+GGG | + | chr2.3:17395239-17395258 | MS.gene88372:CDS | 45.0% |
| ! | CATGCAATGCCGTTGTTGTT+TGG | + | chr2.3:17396974-17396993 | MS.gene88372:CDS | 45.0% |
| ! | CTTGGCTATGGTGCTTTTCT+TGG | + | chr2.3:17397411-17397430 | MS.gene88372:CDS | 45.0% |
| ! | CTTTAAAGGTCCTGTGGTTC+AGG | - | chr2.3:17395232-17395251 | None:intergenic | 45.0% |
| ! | GAACCACAGGACCTTTAAAG+AGG | + | chr2.3:17395232-17395251 | MS.gene88372:CDS | 45.0% |
| ! | TAGTCCTTGCGGTAGTTTTC+TGG | - | chr2.3:17396246-17396265 | None:intergenic | 45.0% |
| !! | AATGCAGTTGTTTCTGGGCT+TGG | + | chr2.3:17397976-17397995 | MS.gene88372:CDS | 45.0% |
| !! | ATCAGTTATGGTGGTGGTGA+TGG | + | chr2.3:17395738-17395757 | MS.gene88372:intron | 45.0% |
| !! | CTTTGTTTCTCTGGGACCTT+TGG | + | chr2.3:17395275-17395294 | MS.gene88372:CDS | 45.0% |
| !! | GCCATTTTGTCCTTGTGTTG+TGG | + | chr2.3:17395975-17395994 | MS.gene88372:intron | 45.0% |
| !! | GGTGATGGAGGTGATGATAA+TGG | + | chr2.3:17395753-17395772 | MS.gene88372:intron | 45.0% |
| !! | GTGCATGGTTGGTTTAAGTG+CGG | + | chr2.3:17397155-17397174 | MS.gene88372:CDS | 45.0% |
| !! | TGCATGGTTGGTTTAAGTGC+GGG | + | chr2.3:17397156-17397175 | MS.gene88372:CDS | 45.0% |
| !!! | GATCCTTTTTCGACGAGCTT+TGG | - | chr2.3:17398058-17398077 | None:intergenic | 45.0% |
| AGGAATATCCCCTGAACCAC+AGG | + | chr2.3:17395219-17395238 | MS.gene88372:CDS | 50.0% | |
| AGTTCATCTGACTGAGCCAG+TGG | - | chr2.3:17397886-17397905 | None:intergenic | 50.0% | |
| CAAGGGAATGCAGATGTGTC+TGG | + | chr2.3:17398015-17398034 | MS.gene88372:CDS | 50.0% | |
| CCAATGGTATGAGTAGCCAC+AGG | - | chr2.3:17395601-17395620 | None:intergenic | 50.0% | |
| CCTGTGGCTACTCATACCAT+TGG | + | chr2.3:17395598-17395617 | MS.gene88372:CDS | 50.0% | |
| CTCCCAAAGCTCGTCGAAAA+AGG | + | chr2.3:17398052-17398071 | MS.gene88372:CDS | 50.0% | |
| GGTCTCTTGGGCATCAAACA+AGG | + | chr2.3:17397997-17398016 | MS.gene88372:CDS | 50.0% | |
| GTACGGAAAAAGGTTGCTGC+AGG | + | chr2.3:17398078-17398097 | MS.gene88372:CDS | 50.0% | |
| GTTCATCTGACTGAGCCAGT+GGG | - | chr2.3:17397885-17397904 | None:intergenic | 50.0% | |
| TAAGCTTGCCGAAATCCAGC+AGG | - | chr2.3:17396067-17396086 | None:intergenic | 50.0% | |
| TATTGACAGCTAGCCACTGG+GGG | + | chr2.3:17395690-17395709 | MS.gene88372:intron | 50.0% | |
| TTAAGTGCGGGTGCAGTACA+GGG | + | chr2.3:17397168-17397187 | MS.gene88372:CDS | 50.0% | |
| TTTAAGTGCGGGTGCAGTAC+AGG | + | chr2.3:17397167-17397186 | MS.gene88372:CDS | 50.0% | |
| ! | AGATTTTCCTCGGGGGACAA+TGG | - | chr2.3:17396455-17396474 | None:intergenic | 50.0% |
| ! | CAGGACCTTTAAAGAGGGGA+AGG | + | chr2.3:17395238-17395257 | MS.gene88372:CDS | 50.0% |
| ! | CTTGGTTAGCTCAGCCCAAA+TGG | + | chr2.3:17396172-17396191 | MS.gene88372:CDS | 50.0% |
| ! | GATGGTGATGAGGGAGATGA+AGG | + | chr2.3:17395807-17395826 | MS.gene88372:intron | 50.0% |
| ! | GGACCTTTAAAGAGGGGAAG+GGG | + | chr2.3:17395240-17395259 | MS.gene88372:CDS | 50.0% |
| ! | GTTTCTGGGCTTGGTCTCTT+GGG | + | chr2.3:17397985-17398004 | MS.gene88372:CDS | 50.0% |
| ! | TCCCCTCTTTAAAGGTCCTG+TGG | - | chr2.3:17395238-17395257 | None:intergenic | 50.0% |
| !! | AGTTATGGTGGTGGTGATGG+AGG | + | chr2.3:17395741-17395760 | MS.gene88372:intron | 50.0% |
| !! | TGTTTCTGGGCTTGGTCTCT+TGG | + | chr2.3:17397984-17398003 | MS.gene88372:CDS | 50.0% |
| AACTCCAAGCCAGGCACGTT+TGG | - | chr2.3:17397854-17397873 | None:intergenic | 55.0% | |
| ACTTCCAAACGTGCCTGGCT+TGG | + | chr2.3:17397847-17397866 | MS.gene88372:CDS | 55.0% | |
| CAAGGCTGCTGAGTTGTGCA+TGG | + | chr2.3:17397140-17397159 | MS.gene88372:CDS | 55.0% | |
| CATTGCATGCTGCTGCAGTG+AGG | - | chr2.3:17396963-17396982 | None:intergenic | 55.0% | |
| CCTCCCCTTCCCCTCTTTAA+AGG | - | chr2.3:17395246-17395265 | None:intergenic | 55.0% | |
| GAGAGACTTCCAAACGTGCC+TGG | + | chr2.3:17397842-17397861 | MS.gene88372:CDS | 55.0% | |
| GCTGCTGAGTTGTGCATGGT+TGG | + | chr2.3:17397144-17397163 | MS.gene88372:CDS | 55.0% | |
| GGTGATGAGGGAGATGAAGG+TGG | + | chr2.3:17395810-17395829 | MS.gene88372:intron | 55.0% | |
| ! | CCTTTAAAGAGGGGAAGGGG+AGG | + | chr2.3:17395243-17395262 | MS.gene88372:CDS | 55.0% |
| AAGCCTACTGGCAGTTGGCC+TGG | - | chr2.3:17396219-17396238 | None:intergenic | 60.0% | |
| ATGCCAGGCCAACTGCCAGT+AGG | + | chr2.3:17396213-17396232 | MS.gene88372:CDS | 60.0% | |
| CTACGGTAGGCTGCTCTGTG+TGG | + | chr2.3:17396787-17396806 | MS.gene88372:CDS | 60.0% | |
| GGTAGGCTGCTCTGTGTGGT+GGG | + | chr2.3:17396791-17396810 | MS.gene88372:CDS | 60.0% | |
| GTCTGCCTCAACTCCAAGCC+AGG | - | chr2.3:17397863-17397882 | None:intergenic | 60.0% | |
| TGGAGTTGAGGCAGACCCAC+TGG | + | chr2.3:17397867-17397886 | MS.gene88372:CDS | 60.0% | |
| ! | TCTGGGACCTTTGGCACCAG+AGG | + | chr2.3:17395284-17395303 | MS.gene88372:CDS | 60.0% |
| !! | ACGTGCCTGGCTTGGAGTTG+AGG | + | chr2.3:17397855-17397874 | MS.gene88372:CDS | 60.0% |
| !! | GGGGGAGGTGGTGGAGATAT+TGG | + | chr2.3:17395708-17395727 | MS.gene88372:intron | 60.0% |
| !! | TCGACGAGCTTTGGGAGCTG+AGG | - | chr2.3:17398049-17398068 | None:intergenic | 60.0% |
| ATCTCCACCACCTCCCCCAG+TGG | - | chr2.3:17395706-17395725 | None:intergenic | 65.0% | |
| CGGTAGGCTGCTCTGTGTGG+TGG | + | chr2.3:17396790-17396809 | MS.gene88372:CDS | 65.0% | |
| GAGAGGACCATTGTCCCCCG+AGG | + | chr2.3:17396445-17396464 | MS.gene88372:intron | 65.0% | |
| TGACAGCTAGCCACTGGGGG+AGG | + | chr2.3:17395693-17395712 | MS.gene88372:intron | 65.0% | |
| CAGCTAGCCACTGGGGGAGG+TGG | + | chr2.3:17395696-17395715 | MS.gene88372:intron | 70.0% | |
| CTAGCCACTGGGGGAGGTGG+TGG | + | chr2.3:17395699-17395718 | MS.gene88372:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 17395206 | 17398110 | 17395206 | ID=MS.gene88372 |
| chr2.3 | mRNA | 17395206 | 17398110 | 17395206 | ID=MS.gene88372.t1;Parent=MS.gene88372 |
| chr2.3 | exon | 17395206 | 17395305 | 17395206 | ID=MS.gene88372.t1.exon1;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17395206 | 17395305 | 17395206 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17395566 | 17395627 | 17395566 | ID=MS.gene88372.t1.exon2;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17395566 | 17395627 | 17395566 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17396001 | 17396093 | 17396001 | ID=MS.gene88372.t1.exon3;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17396001 | 17396093 | 17396001 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17396170 | 17396285 | 17396170 | ID=MS.gene88372.t1.exon4;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17396170 | 17396285 | 17396170 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17396737 | 17396835 | 17396737 | ID=MS.gene88372.t1.exon5;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17396737 | 17396835 | 17396737 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17396924 | 17397229 | 17396924 | ID=MS.gene88372.t1.exon6;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17396924 | 17397229 | 17396924 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17397374 | 17397538 | 17397374 | ID=MS.gene88372.t1.exon7;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17397374 | 17397538 | 17397374 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| chr2.3 | exon | 17397822 | 17398110 | 17397822 | ID=MS.gene88372.t1.exon8;Parent=MS.gene88372.t1 |
| chr2.3 | CDS | 17397822 | 17398110 | 17397822 | ID=cds.MS.gene88372.t1;Parent=MS.gene88372.t1 |
| Gene Sequence |
| Protein sequence |
