Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91226.t1 | XP_003615981.1 | 94.1 | 324 | 17 | 1 | 1 | 324 | 1 | 322 | 4.70E-173 | 617.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91226.t1 | P22195 | 60.0 | 300 | 114 | 4 | 25 | 323 | 22 | 316 | 3.4e-95 | 349.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91226.t1 | G7KFK8 | 94.1 | 324 | 17 | 1 | 1 | 324 | 1 | 322 | 3.4e-173 | 617.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04925 | MS.gene91226 | 0.80183 | 7.48E-49 | -1.69E-46 |
| MS.gene04926 | MS.gene91226 | 0.843611 | 1.26E-58 | -1.69E-46 |
| MS.gene049549 | MS.gene91226 | 0.834814 | 2.41E-56 | -1.69E-46 |
| MS.gene050095 | MS.gene91226 | 0.813939 | 1.99E-51 | -1.69E-46 |
| MS.gene050096 | MS.gene91226 | 0.807187 | 5.71E-50 | -1.69E-46 |
| MS.gene050344 | MS.gene91226 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene91226 | 0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene050479 | MS.gene91226 | 0.81146 | 6.93E-51 | -1.69E-46 |
| MS.gene050547 | MS.gene91226 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene91226 | 0.831938 | 1.26E-55 | -1.69E-46 |
| MS.gene050722 | MS.gene91226 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene050725 | MS.gene91226 | 0.805114 | 1.56E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene91226 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene91226 | 0.833578 | 4.92E-56 | -1.69E-46 |
| MS.gene052212 | MS.gene91226 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene91226 | 0.838833 | 2.27E-57 | -1.69E-46 |
| MS.gene053031 | MS.gene91226 | 0.819231 | 1.29E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene91226 | 0.81037 | 1.19E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene91226 | 0.858166 | 9.92E-63 | -1.69E-46 |
| MS.gene053887 | MS.gene91226 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene054138 | MS.gene91226 | 0.803995 | 2.67E-49 | -1.69E-46 |
| MS.gene054146 | MS.gene91226 | 0.843018 | 1.81E-58 | -1.69E-46 |
| MS.gene054147 | MS.gene91226 | 0.835134 | 2.00E-56 | -1.69E-46 |
| MS.gene054277 | MS.gene91226 | 0.847618 | 1.03E-59 | -1.69E-46 |
| MS.gene054742 | MS.gene91226 | 0.842839 | 2.02E-58 | -1.69E-46 |
| MS.gene055124 | MS.gene91226 | 0.804486 | 2.11E-49 | -1.69E-46 |
| MS.gene055240 | MS.gene91226 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene91226 | 0.809548 | 1.79E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene91226 | 0.846693 | 1.85E-59 | -1.69E-46 |
| MS.gene056330 | MS.gene91226 | 0.814941 | 1.19E-51 | -1.69E-46 |
| MS.gene056680 | MS.gene91226 | 0.807252 | 5.54E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene91226 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene91226 | 0.845764 | 3.31E-59 | -1.69E-46 |
| MS.gene056922 | MS.gene91226 | 0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene91226 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene91226 | 0.817045 | 4.04E-52 | -1.69E-46 |
| MS.gene057550 | MS.gene91226 | 0.807601 | 4.67E-50 | -1.69E-46 |
| MS.gene057820 | MS.gene91226 | 0.8067 | 7.24E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene91226 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene059039 | MS.gene91226 | 0.805329 | 1.41E-49 | -1.69E-46 |
| MS.gene059891 | MS.gene91226 | 0.821462 | 3.99E-53 | -1.69E-46 |
| MS.gene059892 | MS.gene91226 | 0.808714 | 2.70E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene91226 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene91226 | 0.831659 | 1.47E-55 | -1.69E-46 |
| MS.gene061092 | MS.gene91226 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene061094 | MS.gene91226 | 0.803974 | 2.70E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91226.t1 | MTR_5g074760 | 94.136 | 324 | 17 | 1 | 1 | 324 | 1 | 322 | 0.0 | 624 |
| MS.gene91226.t1 | MTR_5g074740 | 92.615 | 325 | 22 | 1 | 1 | 325 | 1 | 323 | 0.0 | 617 |
| MS.gene91226.t1 | MTR_5g074710 | 86.769 | 325 | 41 | 1 | 1 | 325 | 1 | 323 | 0.0 | 588 |
| MS.gene91226.t1 | MTR_5g074860 | 71.609 | 317 | 90 | 0 | 6 | 322 | 8 | 324 | 1.01e-172 | 482 |
| MS.gene91226.t1 | MTR_3g467600 | 65.300 | 317 | 107 | 2 | 8 | 323 | 10 | 324 | 1.95e-146 | 415 |
| MS.gene91226.t1 | MTR_5g074860 | 61.830 | 317 | 82 | 1 | 6 | 322 | 8 | 285 | 1.12e-139 | 397 |
| MS.gene91226.t1 | MTR_5g074700 | 85.841 | 226 | 18 | 1 | 100 | 325 | 5 | 216 | 2.04e-138 | 391 |
| MS.gene91226.t1 | MTR_4g029170 | 59.385 | 325 | 126 | 4 | 1 | 323 | 1 | 321 | 1.77e-130 | 375 |
| MS.gene91226.t1 | MTR_4g029180 | 63.514 | 296 | 102 | 4 | 30 | 323 | 30 | 321 | 4.15e-126 | 363 |
| MS.gene91226.t1 | MTR_3g466200 | 55.000 | 320 | 133 | 8 | 8 | 323 | 8 | 320 | 3.95e-119 | 346 |
| MS.gene91226.t1 | MTR_5g074970 | 55.901 | 322 | 128 | 8 | 7 | 323 | 14 | 326 | 4.39e-119 | 346 |
| MS.gene91226.t1 | MTR_3g072190 | 55.486 | 319 | 134 | 5 | 8 | 323 | 5 | 318 | 1.58e-117 | 342 |
| MS.gene91226.t1 | MTR_2g084080 | 54.747 | 316 | 137 | 6 | 9 | 323 | 7 | 317 | 2.49e-115 | 336 |
| MS.gene91226.t1 | MTR_2g084020 | 54.012 | 324 | 142 | 6 | 1 | 323 | 1 | 318 | 9.63e-115 | 335 |
| MS.gene91226.t1 | MTR_2g084010 | 53.704 | 324 | 143 | 5 | 1 | 323 | 1 | 318 | 1.94e-114 | 334 |
| MS.gene91226.t1 | MTR_5g083860 | 53.750 | 320 | 136 | 6 | 7 | 323 | 15 | 325 | 2.06e-114 | 334 |
| MS.gene91226.t1 | MTR_4g029200 | 55.556 | 306 | 130 | 5 | 19 | 323 | 38 | 338 | 5.73e-114 | 333 |
| MS.gene91226.t1 | MTR_3g094650 | 54.777 | 314 | 134 | 5 | 13 | 323 | 14 | 322 | 2.97e-113 | 331 |
| MS.gene91226.t1 | MTR_2g084110 | 55.663 | 309 | 131 | 6 | 16 | 323 | 14 | 317 | 3.29e-112 | 328 |
| MS.gene91226.t1 | MTR_2g084090 | 54.839 | 310 | 133 | 6 | 16 | 323 | 14 | 318 | 1.45e-111 | 327 |
| MS.gene91226.t1 | MTR_2g084000 | 52.500 | 320 | 143 | 6 | 9 | 323 | 4 | 319 | 1.55e-111 | 327 |
| MS.gene91226.t1 | MTR_1g115900 | 53.292 | 319 | 140 | 7 | 8 | 323 | 9 | 321 | 1.84e-111 | 327 |
| MS.gene91226.t1 | MTR_7g072510 | 51.582 | 316 | 144 | 5 | 9 | 323 | 5 | 312 | 1.60e-108 | 318 |
| MS.gene91226.t1 | MTR_7g072480 | 53.968 | 315 | 138 | 5 | 10 | 323 | 8 | 316 | 3.13e-108 | 318 |
| MS.gene91226.t1 | MTR_3g094670 | 54.403 | 318 | 137 | 5 | 9 | 323 | 10 | 322 | 5.07e-108 | 318 |
| MS.gene91226.t1 | MTR_3g094630 | 54.717 | 318 | 136 | 5 | 9 | 323 | 10 | 322 | 5.05e-107 | 315 |
| MS.gene91226.t1 | MTR_4g029190 | 52.145 | 303 | 136 | 6 | 25 | 323 | 43 | 340 | 1.41e-104 | 310 |
| MS.gene91226.t1 | MTR_4g083710 | 49.062 | 320 | 154 | 6 | 9 | 323 | 9 | 324 | 1.91e-103 | 306 |
| MS.gene91226.t1 | MTR_3g466180 | 52.532 | 316 | 144 | 4 | 9 | 323 | 13 | 323 | 2.98e-103 | 306 |
| MS.gene91226.t1 | MTR_7g026990 | 49.216 | 319 | 155 | 7 | 6 | 323 | 10 | 322 | 4.81e-103 | 305 |
| MS.gene91226.t1 | MTR_5g021060 | 52.131 | 305 | 134 | 5 | 27 | 323 | 30 | 330 | 1.15e-102 | 305 |
| MS.gene91226.t1 | MTR_8g076820 | 51.148 | 305 | 137 | 5 | 27 | 323 | 30 | 330 | 1.14e-99 | 297 |
| MS.gene91226.t1 | MTR_4g074995 | 48.265 | 317 | 142 | 7 | 12 | 323 | 9 | 308 | 2.93e-96 | 287 |
| MS.gene91226.t1 | MTR_3g072190 | 56.863 | 255 | 104 | 4 | 70 | 323 | 2 | 251 | 9.45e-95 | 281 |
| MS.gene91226.t1 | MTR_2g029560 | 45.921 | 331 | 165 | 6 | 1 | 323 | 1 | 325 | 1.28e-94 | 284 |
| MS.gene91226.t1 | MTR_7g093370 | 44.923 | 325 | 167 | 5 | 8 | 323 | 50 | 371 | 6.65e-94 | 283 |
| MS.gene91226.t1 | MTR_2g028980 | 46.951 | 328 | 159 | 6 | 9 | 324 | 7 | 331 | 1.29e-93 | 282 |
| MS.gene91226.t1 | MTR_4g125940 | 48.036 | 331 | 156 | 7 | 4 | 324 | 6 | 330 | 1.61e-93 | 281 |
| MS.gene91226.t1 | MTR_1g022970 | 47.541 | 305 | 149 | 4 | 27 | 323 | 46 | 347 | 2.02e-92 | 279 |
| MS.gene91226.t1 | MTR_5g017850 | 48.193 | 332 | 157 | 9 | 1 | 323 | 1 | 326 | 1.35e-91 | 276 |
| MS.gene91226.t1 | MTR_2g029800 | 48.534 | 307 | 147 | 5 | 25 | 323 | 27 | 330 | 7.28e-91 | 275 |
| MS.gene91226.t1 | MTR_1g054205 | 45.016 | 311 | 159 | 5 | 22 | 323 | 19 | 326 | 7.02e-90 | 272 |
| MS.gene91226.t1 | MTR_2g029830 | 46.906 | 307 | 152 | 5 | 25 | 323 | 26 | 329 | 7.32e-90 | 273 |
| MS.gene91226.t1 | MTR_2g040000 | 47.170 | 318 | 152 | 7 | 18 | 324 | 20 | 332 | 8.06e-90 | 272 |
| MS.gene91226.t1 | MTR_5g017860 | 46.687 | 332 | 162 | 9 | 1 | 323 | 1 | 326 | 1.21e-89 | 271 |
| MS.gene91226.t1 | MTR_2g029815 | 44.308 | 325 | 167 | 5 | 7 | 323 | 12 | 330 | 7.42e-89 | 270 |
| MS.gene91226.t1 | MTR_2g029860 | 44.720 | 322 | 165 | 5 | 10 | 323 | 14 | 330 | 2.66e-88 | 268 |
| MS.gene91226.t1 | MTR_4g122640 | 46.580 | 307 | 154 | 6 | 23 | 323 | 34 | 336 | 2.82e-88 | 268 |
| MS.gene91226.t1 | MTR_4g074990 | 45.511 | 323 | 149 | 7 | 8 | 323 | 3 | 305 | 3.86e-88 | 266 |
| MS.gene91226.t1 | MTR_2g029730 | 46.032 | 315 | 159 | 5 | 17 | 323 | 15 | 326 | 2.75e-87 | 266 |
| MS.gene91226.t1 | MTR_2g029820 | 45.928 | 307 | 155 | 4 | 25 | 323 | 27 | 330 | 3.58e-87 | 266 |
| MS.gene91226.t1 | MTR_4g030890 | 47.059 | 306 | 148 | 5 | 25 | 323 | 98 | 396 | 4.02e-86 | 265 |
| MS.gene91226.t1 | MTR_4g031140 | 44.343 | 327 | 168 | 5 | 4 | 323 | 5 | 324 | 4.53e-86 | 263 |
| MS.gene91226.t1 | MTR_5g014100 | 47.419 | 310 | 146 | 6 | 27 | 323 | 26 | 331 | 7.34e-86 | 261 |
| MS.gene91226.t1 | MTR_4g125940 | 51.971 | 279 | 119 | 6 | 56 | 324 | 2 | 275 | 1.21e-85 | 259 |
| MS.gene91226.t1 | MTR_2g029740 | 44.479 | 326 | 166 | 6 | 7 | 324 | 13 | 331 | 2.18e-85 | 261 |
| MS.gene91226.t1 | MTR_2g029910 | 45.289 | 329 | 163 | 8 | 7 | 325 | 13 | 334 | 1.71e-84 | 259 |
| MS.gene91226.t1 | MTR_5g049280 | 46.278 | 309 | 152 | 8 | 26 | 323 | 32 | 337 | 6.48e-84 | 257 |
| MS.gene91226.t1 | MTR_2g029750 | 45.092 | 326 | 164 | 7 | 7 | 324 | 13 | 331 | 7.88e-84 | 257 |
| MS.gene91226.t1 | MTR_4g074980 | 46.000 | 300 | 133 | 7 | 25 | 323 | 23 | 294 | 6.70e-83 | 253 |
| MS.gene91226.t1 | MTR_1g101830 | 44.753 | 324 | 160 | 11 | 8 | 323 | 10 | 322 | 1.07e-82 | 253 |
| MS.gene91226.t1 | MTR_2g029850 | 44.951 | 307 | 158 | 5 | 25 | 323 | 27 | 330 | 2.65e-81 | 251 |
| MS.gene91226.t1 | MTR_3g092990 | 40.964 | 332 | 181 | 7 | 1 | 323 | 1 | 326 | 9.10e-79 | 243 |
| MS.gene91226.t1 | MTR_1g077000 | 44.295 | 298 | 156 | 7 | 27 | 323 | 39 | 327 | 2.77e-78 | 242 |
| MS.gene91226.t1 | MTR_1g038680 | 42.763 | 304 | 159 | 7 | 31 | 323 | 33 | 332 | 8.03e-77 | 238 |
| MS.gene91226.t1 | MTR_1g086490 | 40.719 | 334 | 177 | 6 | 9 | 325 | 13 | 342 | 4.61e-76 | 237 |
| MS.gene91226.t1 | MTR_1g086320 | 40.184 | 326 | 179 | 6 | 9 | 323 | 13 | 333 | 4.68e-75 | 234 |
| MS.gene91226.t1 | MTR_4g046713 | 40.663 | 332 | 182 | 8 | 1 | 323 | 1 | 326 | 3.48e-74 | 231 |
| MS.gene91226.t1 | MTR_0155s0040 | 41.667 | 300 | 165 | 8 | 25 | 323 | 25 | 315 | 1.68e-73 | 229 |
| MS.gene91226.t1 | MTR_2g088770 | 41.742 | 333 | 176 | 11 | 1 | 323 | 1 | 325 | 2.14e-73 | 229 |
| MS.gene91226.t1 | MTR_4g074980 | 49.573 | 234 | 110 | 5 | 25 | 253 | 23 | 253 | 1.90e-72 | 224 |
| MS.gene91226.t1 | MTR_2g029830 | 47.490 | 259 | 125 | 5 | 73 | 323 | 6 | 261 | 1.86e-71 | 223 |
| MS.gene91226.t1 | MTR_1g025980 | 40.252 | 318 | 173 | 9 | 9 | 318 | 7 | 315 | 5.14e-68 | 215 |
| MS.gene91226.t1 | MTR_8g075100 | 40.984 | 305 | 161 | 8 | 27 | 323 | 26 | 319 | 2.45e-67 | 214 |
| MS.gene91226.t1 | MTR_3g092990 | 38.855 | 332 | 177 | 8 | 1 | 323 | 1 | 315 | 2.94e-67 | 213 |
| MS.gene91226.t1 | MTR_5g022870 | 40.000 | 325 | 174 | 9 | 9 | 323 | 3 | 316 | 3.68e-67 | 213 |
| MS.gene91226.t1 | MTR_6g027440 | 37.188 | 320 | 188 | 6 | 9 | 323 | 3 | 314 | 5.06e-66 | 210 |
| MS.gene91226.t1 | MTR_7g107520 | 39.385 | 325 | 178 | 8 | 8 | 323 | 6 | 320 | 2.16e-65 | 209 |
| MS.gene91226.t1 | MTR_2g008710 | 39.329 | 328 | 176 | 10 | 9 | 323 | 8 | 325 | 2.32e-64 | 206 |
| MS.gene91226.t1 | MTR_7g029030 | 40.498 | 321 | 178 | 8 | 9 | 323 | 7 | 320 | 3.23e-64 | 206 |
| MS.gene91226.t1 | MTR_4g133800 | 40.789 | 304 | 158 | 11 | 31 | 325 | 45 | 335 | 1.02e-63 | 205 |
| MS.gene91226.t1 | MTR_2g437770 | 41.639 | 305 | 157 | 10 | 27 | 323 | 50 | 341 | 1.33e-61 | 200 |
| MS.gene91226.t1 | MTR_1g009750 | 39.677 | 310 | 168 | 9 | 26 | 323 | 26 | 328 | 2.62e-61 | 198 |
| MS.gene91226.t1 | MTR_7g086820 | 37.582 | 306 | 175 | 8 | 25 | 324 | 18 | 313 | 8.48e-61 | 197 |
| MS.gene91226.t1 | MTR_8g062780 | 38.154 | 325 | 186 | 6 | 11 | 325 | 7 | 326 | 1.18e-60 | 197 |
| MS.gene91226.t1 | MTR_5g016010 | 37.994 | 329 | 183 | 9 | 6 | 319 | 3 | 325 | 1.72e-60 | 196 |
| MS.gene91226.t1 | MTR_4g087965 | 40.065 | 307 | 166 | 9 | 26 | 319 | 41 | 342 | 1.41e-59 | 194 |
| MS.gene91226.t1 | MTR_4g114210 | 37.576 | 330 | 180 | 10 | 10 | 323 | 1 | 320 | 4.56e-59 | 192 |
| MS.gene91226.t1 | MTR_1g090760 | 34.954 | 329 | 198 | 7 | 8 | 325 | 9 | 332 | 5.97e-58 | 190 |
| MS.gene91226.t1 | MTR_7g086870 | 37.793 | 299 | 175 | 8 | 27 | 323 | 22 | 311 | 8.67e-58 | 189 |
| MS.gene91226.t1 | MTR_4g095450 | 38.110 | 328 | 186 | 9 | 1 | 319 | 1 | 320 | 2.21e-57 | 188 |
| MS.gene91226.t1 | MTR_4g127670 | 39.228 | 311 | 166 | 9 | 26 | 323 | 23 | 323 | 2.49e-57 | 188 |
| MS.gene91226.t1 | MTR_3g072210 | 52.660 | 188 | 84 | 4 | 138 | 323 | 54 | 238 | 2.94e-57 | 185 |
| MS.gene91226.t1 | MTR_2g099175 | 36.218 | 312 | 176 | 9 | 26 | 324 | 35 | 336 | 3.48e-55 | 183 |
| MS.gene91226.t1 | MTR_2g078610 | 35.574 | 357 | 181 | 10 | 9 | 322 | 55 | 405 | 2.77e-54 | 182 |
| MS.gene91226.t1 | MTR_0286s0010 | 35.168 | 327 | 188 | 9 | 12 | 323 | 17 | 334 | 2.89e-54 | 181 |
| MS.gene91226.t1 | MTR_6g008075 | 35.168 | 327 | 188 | 9 | 12 | 323 | 17 | 334 | 2.89e-54 | 181 |
| MS.gene91226.t1 | MTR_2g008160 | 37.975 | 316 | 165 | 9 | 25 | 323 | 22 | 323 | 3.58e-54 | 180 |
| MS.gene91226.t1 | MTR_2g077990 | 35.854 | 357 | 180 | 10 | 9 | 322 | 55 | 405 | 4.10e-54 | 182 |
| MS.gene91226.t1 | MTR_2g067440 | 36.047 | 344 | 172 | 10 | 20 | 322 | 50 | 386 | 1.07e-52 | 178 |
| MS.gene91226.t1 | MTR_6g043240 | 36.061 | 330 | 185 | 12 | 8 | 323 | 14 | 331 | 7.34e-52 | 175 |
| MS.gene91226.t1 | MTR_1g066710 | 35.082 | 305 | 186 | 7 | 25 | 323 | 25 | 323 | 2.86e-51 | 172 |
| MS.gene91226.t1 | MTR_6g043280 | 34.853 | 307 | 186 | 10 | 22 | 323 | 35 | 332 | 3.03e-50 | 170 |
| MS.gene91226.t1 | MTR_0147s0010 | 33.951 | 324 | 167 | 8 | 27 | 322 | 77 | 381 | 6.89e-50 | 170 |
| MS.gene91226.t1 | MTR_4g132490 | 31.475 | 305 | 197 | 5 | 26 | 323 | 28 | 327 | 1.09e-49 | 168 |
| MS.gene91226.t1 | MTR_1g009750 | 36.688 | 308 | 163 | 9 | 26 | 323 | 26 | 311 | 2.29e-49 | 167 |
| MS.gene91226.t1 | MTR_1g066380 | 34.314 | 306 | 189 | 7 | 24 | 323 | 24 | 323 | 4.81e-49 | 167 |
| MS.gene91226.t1 | MTR_2g078280 | 35.756 | 344 | 172 | 10 | 9 | 309 | 55 | 392 | 5.34e-49 | 168 |
| MS.gene91226.t1 | MTR_1g066640 | 34.426 | 305 | 188 | 7 | 25 | 323 | 25 | 323 | 7.97e-48 | 164 |
| MS.gene91226.t1 | MTR_6g043460 | 36.093 | 302 | 181 | 9 | 22 | 319 | 31 | 324 | 1.04e-47 | 164 |
| MS.gene91226.t1 | MTR_3g105790 | 34.985 | 323 | 191 | 6 | 11 | 323 | 9 | 322 | 1.74e-47 | 162 |
| MS.gene91226.t1 | MTR_5g033470 | 32.051 | 312 | 194 | 8 | 25 | 323 | 71 | 377 | 1.21e-45 | 159 |
| MS.gene91226.t1 | MTR_2g008730 | 41.296 | 247 | 126 | 8 | 89 | 323 | 62 | 301 | 1.22e-45 | 157 |
| MS.gene91226.t1 | MTR_1g066680 | 33.770 | 305 | 189 | 8 | 25 | 323 | 25 | 322 | 1.69e-45 | 157 |
| MS.gene91226.t1 | MTR_2g067450 | 35.783 | 313 | 174 | 10 | 25 | 322 | 9 | 309 | 1.75e-44 | 154 |
| MS.gene91226.t1 | MTR_7g072490 | 42.041 | 245 | 82 | 7 | 73 | 316 | 2 | 187 | 5.24e-44 | 150 |
| MS.gene91226.t1 | MTR_3g072260 | 65.455 | 110 | 37 | 1 | 26 | 135 | 25 | 133 | 4.05e-43 | 145 |
| MS.gene91226.t1 | MTR_2g008160 | 34.839 | 310 | 148 | 9 | 25 | 323 | 22 | 288 | 6.94e-42 | 147 |
| MS.gene91226.t1 | MTR_4g132110 | 30.539 | 334 | 214 | 7 | 3 | 324 | 2 | 329 | 7.50e-42 | 148 |
| MS.gene91226.t1 | MTR_4g132110 | 29.970 | 337 | 217 | 7 | 3 | 324 | 2 | 334 | 7.96e-40 | 143 |
| MS.gene91226.t1 | MTR_2g008160 | 44.068 | 177 | 92 | 5 | 25 | 201 | 22 | 191 | 2.80e-39 | 137 |
| MS.gene91226.t1 | MTR_5g074770 | 57.143 | 112 | 43 | 1 | 211 | 322 | 2 | 108 | 1.45e-38 | 132 |
| MS.gene91226.t1 | MTR_2g029880 | 40.957 | 188 | 95 | 3 | 145 | 325 | 12 | 190 | 8.63e-38 | 134 |
| MS.gene91226.t1 | MTR_1g066380 | 32.819 | 259 | 162 | 7 | 71 | 323 | 3 | 255 | 3.16e-36 | 131 |
| MS.gene91226.t1 | MTR_3g105790 | 36.250 | 240 | 138 | 5 | 94 | 323 | 12 | 246 | 9.17e-32 | 119 |
| MS.gene91226.t1 | MTR_2g077980 | 29.391 | 279 | 146 | 10 | 89 | 322 | 11 | 283 | 3.76e-22 | 94.7 |
| MS.gene91226.t1 | MTR_2g078560 | 31.004 | 229 | 115 | 7 | 133 | 322 | 95 | 319 | 4.73e-21 | 92.0 |
| MS.gene91226.t1 | MTR_3g462850 | 39.716 | 141 | 74 | 5 | 194 | 323 | 9 | 149 | 8.92e-21 | 87.4 |
| MS.gene91226.t1 | MTR_4g031040 | 34.911 | 169 | 71 | 3 | 86 | 254 | 1 | 130 | 3.72e-19 | 82.8 |
| MS.gene91226.t1 | MTR_5g058120 | 36.250 | 160 | 87 | 5 | 165 | 319 | 6 | 155 | 9.85e-19 | 84.3 |
| MS.gene91226.t1 | MTR_6g048160 | 54.795 | 73 | 28 | 3 | 66 | 138 | 22 | 89 | 9.66e-18 | 77.4 |
| MS.gene91226.t1 | MTR_3g086710 | 59.322 | 59 | 24 | 0 | 14 | 72 | 6 | 64 | 1.04e-16 | 74.7 |
| MS.gene91226.t1 | MTR_4g114220 | 46.988 | 83 | 33 | 3 | 53 | 135 | 29 | 100 | 1.52e-16 | 75.9 |
| MS.gene91226.t1 | MTR_1g089005 | 37.500 | 136 | 75 | 4 | 11 | 140 | 1 | 132 | 1.95e-16 | 75.9 |
| MS.gene91226.t1 | MTR_7g086790 | 30.851 | 188 | 111 | 7 | 74 | 260 | 17 | 186 | 2.48e-15 | 73.6 |
| MS.gene91226.t1 | MTR_2g029930 | 41.304 | 92 | 29 | 2 | 25 | 105 | 17 | 94 | 5.98e-15 | 70.1 |
| MS.gene91226.t1 | MTR_1g098320 | 40.741 | 81 | 46 | 1 | 244 | 324 | 47 | 125 | 7.28e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91226.t1 | AT5G05340 | 55.960 | 302 | 125 | 5 | 25 | 323 | 28 | 324 | 4.01e-115 | 336 |
| MS.gene91226.t1 | AT5G58390 | 53.459 | 318 | 139 | 7 | 10 | 323 | 4 | 316 | 8.53e-104 | 307 |
| MS.gene91226.t1 | AT2G18150 | 49.511 | 307 | 143 | 5 | 25 | 323 | 34 | 336 | 4.55e-102 | 303 |
| MS.gene91226.t1 | AT5G58400 | 49.375 | 320 | 151 | 7 | 8 | 323 | 13 | 325 | 3.64e-101 | 300 |
| MS.gene91226.t1 | AT5G66390 | 50.980 | 306 | 138 | 5 | 27 | 324 | 33 | 334 | 1.61e-100 | 299 |
| MS.gene91226.t1 | AT4G36430 | 50.489 | 307 | 140 | 6 | 25 | 323 | 28 | 330 | 1.62e-100 | 299 |
| MS.gene91226.t1 | AT1G14550 | 49.842 | 317 | 152 | 6 | 10 | 323 | 9 | 321 | 3.99e-100 | 298 |
| MS.gene91226.t1 | AT2G18140 | 49.206 | 315 | 148 | 5 | 17 | 323 | 25 | 335 | 8.28e-99 | 295 |
| MS.gene91226.t1 | AT1G44970 | 48.534 | 307 | 147 | 5 | 25 | 323 | 43 | 346 | 2.33e-95 | 286 |
| MS.gene91226.t1 | AT5G06720 | 44.136 | 324 | 170 | 4 | 8 | 323 | 13 | 333 | 4.93e-94 | 283 |
| MS.gene91226.t1 | AT1G14540 | 48.837 | 301 | 148 | 5 | 25 | 323 | 19 | 315 | 2.84e-93 | 280 |
| MS.gene91226.t1 | AT3G50990 | 46.474 | 312 | 155 | 5 | 21 | 324 | 35 | 342 | 8.99e-93 | 280 |
| MS.gene91226.t1 | AT4G08770 | 48.867 | 309 | 145 | 6 | 25 | 323 | 22 | 327 | 4.99e-92 | 278 |
| MS.gene91226.t1 | AT5G06730 | 42.901 | 324 | 174 | 4 | 8 | 323 | 14 | 334 | 4.12e-91 | 276 |
| MS.gene91226.t1 | AT2G38390 | 48.052 | 308 | 148 | 5 | 25 | 323 | 29 | 333 | 4.30e-89 | 270 |
| MS.gene91226.t1 | AT1G49570 | 48.366 | 306 | 142 | 8 | 25 | 319 | 46 | 346 | 2.18e-88 | 269 |
| MS.gene91226.t1 | AT4G08780 | 47.573 | 309 | 149 | 6 | 25 | 323 | 22 | 327 | 2.76e-88 | 268 |
| MS.gene91226.t1 | AT5G19890 | 45.399 | 326 | 159 | 8 | 8 | 323 | 11 | 327 | 2.65e-87 | 265 |
| MS.gene91226.t1 | AT2G38380 | 47.727 | 308 | 149 | 5 | 25 | 323 | 29 | 333 | 1.16e-86 | 264 |
| MS.gene91226.t1 | AT3G49120 | 46.006 | 313 | 156 | 6 | 21 | 323 | 26 | 335 | 2.80e-86 | 263 |
| MS.gene91226.t1 | AT3G32980 | 46.602 | 309 | 152 | 6 | 25 | 323 | 29 | 334 | 5.20e-86 | 263 |
| MS.gene91226.t1 | AT3G49110 | 46.278 | 309 | 153 | 6 | 25 | 323 | 31 | 336 | 5.44e-85 | 260 |
| MS.gene91226.t1 | AT4G16270 | 46.512 | 301 | 145 | 7 | 32 | 323 | 55 | 348 | 1.91e-84 | 259 |
| MS.gene91226.t1 | AT2G35380 | 44.817 | 328 | 163 | 7 | 9 | 323 | 13 | 335 | 7.04e-82 | 251 |
| MS.gene91226.t1 | AT1G68850 | 43.114 | 334 | 165 | 9 | 10 | 323 | 7 | 335 | 3.46e-81 | 250 |
| MS.gene91226.t1 | AT5G51890 | 44.308 | 325 | 161 | 11 | 10 | 323 | 7 | 322 | 1.64e-80 | 248 |
| MS.gene91226.t1 | AT1G71695 | 43.974 | 307 | 163 | 6 | 21 | 323 | 38 | 339 | 1.53e-79 | 246 |
| MS.gene91226.t1 | AT2G22420 | 40.994 | 322 | 175 | 6 | 10 | 324 | 7 | 320 | 1.70e-78 | 243 |
| MS.gene91226.t1 | AT5G19880 | 44.194 | 310 | 159 | 5 | 25 | 323 | 23 | 329 | 1.46e-76 | 238 |
| MS.gene91226.t1 | AT3G01190 | 43.421 | 304 | 157 | 7 | 27 | 323 | 26 | 321 | 2.97e-74 | 231 |
| MS.gene91226.t1 | AT5G15180 | 42.025 | 326 | 174 | 8 | 7 | 323 | 10 | 329 | 1.73e-73 | 230 |
| MS.gene91226.t1 | AT5G42180 | 40.491 | 326 | 170 | 9 | 5 | 322 | 7 | 316 | 7.06e-73 | 228 |
| MS.gene91226.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 18 | 325 | 1.83e-71 | 224 |
| MS.gene91226.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 65 | 372 | 7.00e-71 | 224 |
| MS.gene91226.t1 | AT4G11290 | 38.272 | 324 | 185 | 7 | 9 | 323 | 9 | 326 | 3.83e-70 | 221 |
| MS.gene91226.t1 | AT3G03670 | 37.920 | 327 | 181 | 9 | 8 | 323 | 6 | 321 | 4.14e-70 | 221 |
| MS.gene91226.t1 | AT1G05240 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 1.22e-69 | 220 |
| MS.gene91226.t1 | AT1G05250 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 1.22e-69 | 220 |
| MS.gene91226.t1 | AT1G05260 | 39.048 | 315 | 177 | 8 | 19 | 324 | 18 | 326 | 1.06e-68 | 218 |
| MS.gene91226.t1 | AT3G21770 | 41.776 | 304 | 162 | 8 | 25 | 319 | 27 | 324 | 1.20e-68 | 218 |
| MS.gene91226.t1 | AT5G64120 | 39.820 | 334 | 177 | 10 | 4 | 323 | 5 | 328 | 1.25e-68 | 218 |
| MS.gene91226.t1 | AT5G17820 | 38.658 | 313 | 169 | 9 | 19 | 323 | 16 | 313 | 9.82e-65 | 207 |
| MS.gene91226.t1 | AT5G17820 | 38.658 | 313 | 169 | 9 | 19 | 323 | 69 | 366 | 7.74e-64 | 206 |
| MS.gene91226.t1 | AT5G40150 | 37.987 | 308 | 173 | 7 | 25 | 323 | 30 | 328 | 2.76e-62 | 201 |
| MS.gene91226.t1 | AT2G41480 | 37.879 | 330 | 182 | 9 | 7 | 323 | 9 | 328 | 8.80e-62 | 200 |
| MS.gene91226.t1 | AT3G28200 | 37.624 | 303 | 180 | 6 | 25 | 323 | 19 | 316 | 7.77e-61 | 197 |
| MS.gene91226.t1 | AT1G30870 | 41.234 | 308 | 157 | 11 | 27 | 323 | 51 | 345 | 1.19e-60 | 197 |
| MS.gene91226.t1 | AT5G39580 | 40.864 | 301 | 160 | 10 | 31 | 323 | 29 | 319 | 9.55e-59 | 192 |
| MS.gene91226.t1 | AT4G26010 | 35.127 | 316 | 194 | 8 | 9 | 323 | 4 | 309 | 2.61e-58 | 190 |
| MS.gene91226.t1 | AT4G26010 | 35.127 | 316 | 194 | 8 | 9 | 323 | 32 | 337 | 5.80e-58 | 190 |
| MS.gene91226.t1 | AT4G17690 | 38.217 | 314 | 182 | 7 | 18 | 325 | 17 | 324 | 1.08e-57 | 189 |
| MS.gene91226.t1 | AT5G47000 | 36.810 | 326 | 192 | 8 | 8 | 325 | 13 | 332 | 2.08e-57 | 189 |
| MS.gene91226.t1 | AT1G34510 | 36.076 | 316 | 191 | 9 | 9 | 323 | 4 | 309 | 2.09e-57 | 188 |
| MS.gene91226.t1 | AT2G35380 | 45.200 | 250 | 120 | 6 | 87 | 323 | 2 | 247 | 3.58e-57 | 185 |
| MS.gene91226.t1 | AT5G22410 | 34.056 | 323 | 192 | 9 | 9 | 320 | 10 | 322 | 1.50e-56 | 186 |
| MS.gene91226.t1 | AT5G64110 | 38.138 | 333 | 182 | 11 | 5 | 323 | 8 | 330 | 3.08e-56 | 186 |
| MS.gene91226.t1 | AT4G25980 | 36.825 | 315 | 181 | 8 | 20 | 323 | 19 | 326 | 3.86e-56 | 185 |
| MS.gene91226.t1 | AT4G33870 | 34.718 | 337 | 169 | 9 | 30 | 322 | 71 | 400 | 4.11e-56 | 187 |
| MS.gene91226.t1 | AT5G64100 | 38.284 | 303 | 167 | 10 | 30 | 323 | 40 | 331 | 5.83e-56 | 185 |
| MS.gene91226.t1 | AT5G67400 | 38.369 | 331 | 180 | 11 | 9 | 323 | 7 | 329 | 3.75e-55 | 182 |
| MS.gene91226.t1 | AT2G18980 | 36.310 | 336 | 184 | 12 | 4 | 323 | 2 | 323 | 4.31e-55 | 182 |
| MS.gene91226.t1 | AT4G37530 | 38.658 | 313 | 170 | 9 | 25 | 323 | 25 | 329 | 5.52e-55 | 182 |
| MS.gene91226.t1 | AT1G24110 | 35.000 | 320 | 190 | 8 | 16 | 323 | 9 | 322 | 1.02e-54 | 181 |
| MS.gene91226.t1 | AT2G34060 | 37.013 | 308 | 176 | 9 | 26 | 320 | 41 | 343 | 3.80e-54 | 181 |
| MS.gene91226.t1 | AT4G30170 | 37.179 | 312 | 172 | 11 | 25 | 323 | 25 | 325 | 2.05e-53 | 178 |
| MS.gene91226.t1 | AT2G39040 | 38.019 | 313 | 174 | 8 | 25 | 323 | 44 | 350 | 2.84e-53 | 178 |
| MS.gene91226.t1 | AT1G77100 | 35.404 | 322 | 189 | 9 | 11 | 323 | 8 | 319 | 7.51e-52 | 174 |
| MS.gene91226.t1 | AT2G24800 | 35.577 | 312 | 179 | 7 | 24 | 323 | 28 | 329 | 9.75e-52 | 174 |
| MS.gene91226.t1 | AT4G31760 | 33.030 | 330 | 202 | 7 | 4 | 323 | 6 | 326 | 1.55e-51 | 173 |
| MS.gene91226.t1 | AT5G14130 | 35.312 | 320 | 190 | 8 | 13 | 323 | 19 | 330 | 4.45e-51 | 172 |
| MS.gene91226.t1 | AT5G14130 | 35.312 | 320 | 190 | 8 | 13 | 323 | 60 | 371 | 1.02e-50 | 172 |
| MS.gene91226.t1 | AT4G37520 | 36.538 | 312 | 178 | 8 | 25 | 323 | 25 | 329 | 1.42e-50 | 171 |
| MS.gene91226.t1 | AT3G49960 | 35.542 | 332 | 188 | 11 | 10 | 323 | 6 | 329 | 1.48e-50 | 171 |
| MS.gene91226.t1 | AT2G43480 | 34.161 | 322 | 186 | 10 | 17 | 323 | 25 | 335 | 5.26e-50 | 169 |
| MS.gene91226.t1 | AT5G24070 | 34.462 | 325 | 186 | 11 | 14 | 323 | 23 | 335 | 1.05e-48 | 166 |
| MS.gene91226.t1 | AT4G37520 | 36.218 | 312 | 176 | 9 | 25 | 323 | 25 | 326 | 1.07e-48 | 166 |
| MS.gene91226.t1 | AT2G37130 | 34.295 | 312 | 194 | 7 | 18 | 323 | 21 | 327 | 1.34e-46 | 160 |
| MS.gene91226.t1 | AT4G37530 | 39.231 | 260 | 138 | 8 | 25 | 270 | 25 | 278 | 3.43e-46 | 158 |
| MS.gene91226.t1 | AT2G37130 | 34.667 | 300 | 185 | 7 | 30 | 323 | 2 | 296 | 4.30e-46 | 158 |
| MS.gene91226.t1 | AT3G17070 | 32.899 | 307 | 191 | 6 | 27 | 323 | 38 | 339 | 2.62e-45 | 157 |
| MS.gene91226.t1 | AT4G21960 | 29.940 | 334 | 218 | 7 | 1 | 324 | 1 | 328 | 4.32e-42 | 149 |
| MS.gene91226.t1 | AT4G25980 | 42.935 | 184 | 98 | 5 | 18 | 201 | 62 | 238 | 2.18e-40 | 143 |
| MS.gene91226.t1 | AT5G39580 | 44.253 | 174 | 89 | 6 | 31 | 204 | 29 | 194 | 4.84e-34 | 125 |
| MS.gene91226.t1 | AT2G24800 | 41.279 | 172 | 94 | 3 | 24 | 195 | 28 | 192 | 6.49e-32 | 119 |
| MS.gene91226.t1 | AT3G17070 | 30.108 | 279 | 179 | 7 | 55 | 323 | 4 | 276 | 1.26e-30 | 117 |
| MS.gene91226.t1 | AT4G32320 | 26.523 | 279 | 134 | 11 | 41 | 304 | 99 | 321 | 4.97e-13 | 69.3 |
Find 51 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAACAACTAAGTCTTTA+AGG | 0.101127 | 5.1:+57371710 | None:intergenic |
| CCTCTAATTGAATTGTTATT+TGG | 0.117052 | 5.1:+57372324 | None:intergenic |
| CAAATTCTGTCATAATAATT+TGG | 0.189849 | 5.1:+57372751 | None:intergenic |
| CCAAATAACAATTCAATTAG+AGG | 0.210718 | 5.1:-57372324 | MS.gene91226:CDS |
| GAAGCCTCTTACTGGGAAAA+AGG | 0.220866 | 5.1:-57371353 | MS.gene91226:CDS |
| TTGTCGTCGTCGCCAATTCT+AGG | 0.262017 | 5.1:+57371580 | None:intergenic |
| TTGCAAATTCGCTGCAAAAT+TGG | 0.262804 | 5.1:+57371612 | None:intergenic |
| TATCCTTCTTCATTCATATC+TGG | 0.282510 | 5.1:+57371299 | None:intergenic |
| GGTAATTTGAAGCCTCTTAC+TGG | 0.288056 | 5.1:-57371361 | MS.gene91226:CDS |
| AAAGACTTAGTTGTTCTATC+TGG | 0.291396 | 5.1:-57371706 | MS.gene91226:CDS |
| GTTTCTAAAGTTAGTGCATT+TGG | 0.291735 | 5.1:+57371663 | None:intergenic |
| GTAACACTTGGTACCAATAT+TGG | 0.304974 | 5.1:+57371845 | None:intergenic |
| CTATCTGGTGGTCACACAAT+TGG | 0.351955 | 5.1:-57371691 | MS.gene91226:CDS |
| GACATCAACTTTGCAAGCTT+TGG | 0.377869 | 5.1:+57372266 | None:intergenic |
| CAAAAGACATGCCCTAGAAT+TGG | 0.380081 | 5.1:-57371592 | MS.gene91226:CDS |
| TTTATGATTGGCAATGCCTT+TGG | 0.399242 | 5.1:+57372727 | None:intergenic |
| AGTTGACACAAAATACTATA+AGG | 0.410019 | 5.1:-57371527 | MS.gene91226:CDS |
| AGTTGGGAGGTAACCAATAT+TGG | 0.411115 | 5.1:-57371858 | MS.gene91226:CDS |
| GATGATACCCCTACCTTCAT+TGG | 0.417104 | 5.1:-57372363 | MS.gene91226:CDS |
| AATGCACTAACTTTAGAAAC+AGG | 0.420538 | 5.1:-57371660 | MS.gene91226:CDS |
| TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.1:-57371383 | MS.gene91226:CDS |
| TCACAACATAACATTGGTTA+CGG | 0.430798 | 5.1:+57372827 | None:intergenic |
| CACAACATAACATTGGTTAC+GGG | 0.437860 | 5.1:+57372828 | None:intergenic |
| TATTGGTACCAAGTGTTACT+AGG | 0.448839 | 5.1:-57371841 | MS.gene91226:CDS |
| AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5.1:+57372233 | None:intergenic |
| GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.1:-57371382 | MS.gene91226:CDS |
| CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.1:+57371833 | None:intergenic |
| TGCAGTCTTCTCACCAATGA+AGG | 0.480905 | 5.1:+57372350 | None:intergenic |
| GAGATTCAAGATTTGCAAGC+AGG | 0.488930 | 5.1:-57371813 | MS.gene91226:CDS |
| CTTGAAGGAGTAGAATCAAA+TGG | 0.501343 | 5.1:+57371550 | None:intergenic |
| GACTTAGTTGTTCTATCTGG+TGG | 0.509368 | 5.1:-57371703 | MS.gene91226:CDS |
| TGTCGTCGTCGCCAATTCTA+GGG | 0.512250 | 5.1:+57371581 | None:intergenic |
| GTAATTTGAAGCCTCTTACT+GGG | 0.519840 | 5.1:-57371360 | MS.gene91226:CDS |
| AATTATTCGCGAGCCACGCA+TGG | 0.522949 | 5.1:-57372686 | MS.gene91226:CDS |
| TGCAAAATTGGTGTCTATGT+TGG | 0.532185 | 5.1:+57371624 | None:intergenic |
| TCTTCTCACCAATGAAGGTA+GGG | 0.536322 | 5.1:+57372355 | None:intergenic |
| AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5.1:+57371482 | None:intergenic |
| TTACGTTAACAAAGCAGTCA+TGG | 0.552379 | 5.1:+57372638 | None:intergenic |
| GGAGTCAGCTTTGCAATGGT+AGG | 0.560863 | 5.1:+57372772 | None:intergenic |
| AGATTCAAGATTTGCAAGCA+GGG | 0.563486 | 5.1:-57371812 | MS.gene91226:CDS |
| TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5.1:-57371449 | MS.gene91226:CDS |
| GAATCCTCACAGGGTTGTGA+TGG | 0.572397 | 5.1:-57372399 | MS.gene91226:intron |
| ATTATTCGCGAGCCACGCAT+GGG | 0.580539 | 5.1:-57372685 | MS.gene91226:CDS |
| GTCTTCTCACCAATGAAGGT+AGG | 0.586272 | 5.1:+57372354 | None:intergenic |
| ATTTGGAGTCAGCTTTGCAA+TGG | 0.588314 | 5.1:+57372768 | None:intergenic |
| TTCTTCAATCAACAGTTGGG+AGG | 0.601444 | 5.1:-57371871 | MS.gene91226:intron |
| CTTCTCACCAATGAAGGTAG+GGG | 0.615489 | 5.1:+57372356 | None:intergenic |
| TTATGACAGAATTTGTCCAA+AGG | 0.624218 | 5.1:-57372743 | MS.gene91226:CDS |
| AAGGCTTTGTTGTATAAACA+AGG | 0.625131 | 5.1:-57371508 | MS.gene91226:CDS |
| AGCAACGATGCTCCCATGCG+TGG | 0.625399 | 5.1:+57372673 | None:intergenic |
| ATCACAAATTTCAAGTCACG+TGG | 0.659274 | 5.1:-57371739 | MS.gene91226:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATTACATTTTTAAAATT+AGG | - | chr5.1:57371553-57371572 | MS.gene91226:CDS | 10.0% |
| !!! | AAGACTATTTTTTTATATTG+CGG | + | chr5.1:57372026-57372045 | None:intergenic | 15.0% |
| !!! | ATATGAGTTTAATTTAAACA+TGG | + | chr5.1:57372172-57372191 | None:intergenic | 15.0% |
| !!! | TTAACAATTGATTTTATGAT+TGG | + | chr5.1:57371435-57371454 | None:intergenic | 15.0% |
| !! | CAAATTCTGTCATAATAATT+TGG | + | chr5.1:57371399-57371418 | None:intergenic | 20.0% |
| !! | TAAAAATCACAACATAACAT+TGG | + | chr5.1:57371329-57371348 | None:intergenic | 20.0% |
| !! | TTGTATTGCAGAAAAATTTA+GGG | + | chr5.1:57372111-57372130 | None:intergenic | 20.0% |
| !!! | ACAGCTTTTAAATAACATTT+TGG | + | chr5.1:57372086-57372105 | None:intergenic | 20.0% |
| !!! | TATTTTGCTCTTTTTAATCA+TGG | - | chr5.1:57371972-57371991 | MS.gene91226:intron | 20.0% |
| !!! | TGTTAAGTGACTATTTTATA+AGG | + | chr5.1:57371584-57371603 | None:intergenic | 20.0% |
| ! | AGTTGACACAAAATACTATA+AGG | - | chr5.1:57372620-57372639 | MS.gene91226:intron | 25.0% |
| ! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5.1:57372440-57372459 | None:intergenic | 25.0% |
| ! | CCAAATAACAATTCAATTAG+AGG | - | chr5.1:57371823-57371842 | MS.gene91226:CDS | 25.0% |
| ! | CTTGTATTGCAGAAAAATTT+AGG | + | chr5.1:57372112-57372131 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCAATCAACAGT+TGG | - | chr5.1:57372272-57372291 | MS.gene91226:CDS | 25.0% |
| !! | CCTCTAATTGAATTGTTATT+TGG | + | chr5.1:57371826-57371845 | None:intergenic | 25.0% |
| !! | TATGCTTTTGCTAAAGATTT+TGG | - | chr5.1:57372744-57372763 | MS.gene91226:CDS | 25.0% |
| !! | TTTTCTGCAATACAAGTTTA+TGG | - | chr5.1:57372116-57372135 | MS.gene91226:intron | 25.0% |
| !! | TTTTTCTTCAATCAACAGTT+GGG | - | chr5.1:57372273-57372292 | MS.gene91226:CDS | 25.0% |
| !!! | CATTTTGGAAGATTTTATTG+CGG | + | chr5.1:57372071-57372090 | None:intergenic | 25.0% |
| AAAGACTTAGTTGTTCTATC+TGG | - | chr5.1:57372441-57372460 | MS.gene91226:intron | 30.0% | |
| AGCTGCTATAGCTAAAATAT+CGG | + | chr5.1:57371917-57371936 | None:intergenic | 30.0% | |
| AGTTGTGAGAAGTTGAAAAA+TGG | + | chr5.1:57372387-57372406 | None:intergenic | 30.0% | |
| ATCGAATAGATCACTTACTA+TGG | + | chr5.1:57371953-57371972 | None:intergenic | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | - | chr5.1:57372765-57372784 | MS.gene91226:CDS | 30.0% | |
| TGGAGTTTCTATGATTAAGA+TGG | - | chr5.1:57372764-57372783 | MS.gene91226:CDS | 30.0% | |
| TTATGACAGAATTTGTCCAA+AGG | - | chr5.1:57371404-57371423 | MS.gene91226:CDS | 30.0% | |
| ! | AATGCACTAACTTTAGAAAC+AGG | - | chr5.1:57372487-57372506 | MS.gene91226:intron | 30.0% |
| ! | CAATTCAATTAGAGGTTTTG+AGG | - | chr5.1:57371831-57371850 | MS.gene91226:CDS | 30.0% |
| ! | TATTTTGTGTCAACTCTTGA+AGG | + | chr5.1:57372615-57372634 | None:intergenic | 30.0% |
| ! | TCACAACATAACATTGGTTA+CGG | + | chr5.1:57371323-57371342 | None:intergenic | 30.0% |
| !! | AAGGCTTTGTTGTATAAACA+AGG | - | chr5.1:57372639-57372658 | MS.gene91226:intron | 30.0% |
| !! | GTTTCTAAAGTTAGTGCATT+TGG | + | chr5.1:57372487-57372506 | None:intergenic | 30.0% |
| AAAGCTCTTGATCAGAATGA+AGG | + | chr5.1:57372668-57372687 | None:intergenic | 35.0% | |
| AGATTCAAGATTTGCAAGCA+GGG | - | chr5.1:57372335-57372354 | MS.gene91226:CDS | 35.0% | |
| CTTGAAGGAGTAGAATCAAA+TGG | + | chr5.1:57372600-57372619 | None:intergenic | 35.0% | |
| GTAACACTTGGTACCAATAT+TGG | + | chr5.1:57372305-57372324 | None:intergenic | 35.0% | |
| TGCAATGGTAGGACTAAAAA+TGG | + | chr5.1:57371367-57371386 | None:intergenic | 35.0% | |
| TGGTTCTCAAAGTGATAGAT+TGG | - | chr5.1:57372698-57372717 | MS.gene91226:CDS | 35.0% | |
| TGTGAGAAGTTGAAAAATGG+AGG | + | chr5.1:57372384-57372403 | None:intergenic | 35.0% | |
| TTACGTTAACAAAGCAGTCA+TGG | + | chr5.1:57371512-57371531 | None:intergenic | 35.0% | |
| TTATATTGCGGTCGCAATTA+GGG | + | chr5.1:57372014-57372033 | None:intergenic | 35.0% | |
| TTGCAAATTCGCTGCAAAAT+TGG | + | chr5.1:57372538-57372557 | None:intergenic | 35.0% | |
| TTTATATTGCGGTCGCAATT+AGG | + | chr5.1:57372015-57372034 | None:intergenic | 35.0% | |
| TTTATGATTGGCAATGCCTT+TGG | + | chr5.1:57371423-57371442 | None:intergenic | 35.0% | |
| ! | ATCACAAATTTCAAGTCACG+TGG | - | chr5.1:57372408-57372427 | MS.gene91226:intron | 35.0% |
| ! | CACAACATAACATTGGTTAC+GGG | + | chr5.1:57371322-57371341 | None:intergenic | 35.0% |
| ! | GTAATTTGAAGCCTCTTACT+GGG | - | chr5.1:57372787-57372806 | MS.gene91226:CDS | 35.0% |
| ! | TATTGGTACCAAGTGTTACT+AGG | - | chr5.1:57372306-57372325 | MS.gene91226:CDS | 35.0% |
| ! | TCTGATCAAGAGCTTTTCAA+AGG | - | chr5.1:57372672-57372691 | MS.gene91226:CDS | 35.0% |
| ! | TGCAAAATTGGTGTCTATGT+TGG | + | chr5.1:57372526-57372545 | None:intergenic | 35.0% |
| AAGCCTCTTACTGGGAAAAA+GGG | - | chr5.1:57372795-57372814 | MS.gene91226:CDS | 40.0% | |
| AGTTGGGAGGTAACCAATAT+TGG | - | chr5.1:57372289-57372308 | MS.gene91226:CDS | 40.0% | |
| CAAAAGACATGCCCTAGAAT+TGG | - | chr5.1:57372555-57372574 | MS.gene91226:intron | 40.0% | |
| CTCTTCTTCCTAGTAACACT+TGG | + | chr5.1:57372317-57372336 | None:intergenic | 40.0% | |
| GAACATTGTGAATCCTCACA+GGG | - | chr5.1:57371739-57371758 | MS.gene91226:CDS | 40.0% | |
| GACATCAACTTTGCAAGCTT+TGG | + | chr5.1:57371884-57371903 | None:intergenic | 40.0% | |
| GACTTAGTTGTTCTATCTGG+TGG | - | chr5.1:57372444-57372463 | MS.gene91226:intron | 40.0% | |
| GAGAAGTTGAAAAATGGAGG+TGG | + | chr5.1:57372381-57372400 | None:intergenic | 40.0% | |
| GAGATTCAAGATTTGCAAGC+AGG | - | chr5.1:57372334-57372353 | MS.gene91226:CDS | 40.0% | |
| TCTTCTCACCAATGAAGGTA+GGG | + | chr5.1:57371795-57371814 | None:intergenic | 40.0% | |
| TGAACATTGTGAATCCTCAC+AGG | - | chr5.1:57371738-57371757 | MS.gene91226:CDS | 40.0% | |
| TTCTTCAATCAACAGTTGGG+AGG | - | chr5.1:57372276-57372295 | MS.gene91226:CDS | 40.0% | |
| ! | ATTTGGAGTCAGCTTTGCAA+TGG | + | chr5.1:57371382-57371401 | None:intergenic | 40.0% |
| ! | CAAGAGCTTTTCAAAGGTGA+TGG | - | chr5.1:57372678-57372697 | MS.gene91226:CDS | 40.0% |
| ! | GGTAATTTGAAGCCTCTTAC+TGG | - | chr5.1:57372786-57372805 | MS.gene91226:CDS | 40.0% |
| CTATCTGGTGGTCACACAAT+TGG | - | chr5.1:57372456-57372475 | MS.gene91226:intron | 45.0% | |
| CTTCTCACCAATGAAGGTAG+GGG | + | chr5.1:57371794-57371813 | None:intergenic | 45.0% | |
| GAAGCCTCTTACTGGGAAAA+AGG | - | chr5.1:57372794-57372813 | MS.gene91226:CDS | 45.0% | |
| GATGATACCCCTACCTTCAT+TGG | - | chr5.1:57371784-57371803 | MS.gene91226:CDS | 45.0% | |
| GTCTTCTCACCAATGAAGGT+AGG | + | chr5.1:57371796-57371815 | None:intergenic | 45.0% | |
| TGCAGTCTTCTCACCAATGA+AGG | + | chr5.1:57371800-57371819 | None:intergenic | 45.0% | |
| ! | TCACCCTTTTTCCCAGTAAG+AGG | + | chr5.1:57372801-57372820 | None:intergenic | 45.0% |
| AATTATTCGCGAGCCACGCA+TGG | - | chr5.1:57371461-57371480 | MS.gene91226:CDS | 50.0% | |
| ATTATTCGCGAGCCACGCAT+GGG | - | chr5.1:57371462-57371481 | MS.gene91226:CDS | 50.0% | |
| CTGGGAAAAAGGGTGAGATC+AGG | - | chr5.1:57372805-57372824 | MS.gene91226:CDS | 50.0% | |
| GAATCCTCACAGGGTTGTGA+TGG | - | chr5.1:57371748-57371767 | MS.gene91226:CDS | 50.0% | |
| GGAGTCAGCTTTGCAATGGT+AGG | + | chr5.1:57371378-57371397 | None:intergenic | 50.0% | |
| TGATCCATCACAACCCTGTG+AGG | + | chr5.1:57371755-57371774 | None:intergenic | 50.0% | |
| TGTCGTCGTCGCCAATTCTA+GGG | + | chr5.1:57372569-57372588 | None:intergenic | 50.0% | |
| TTGTCGTCGTCGCCAATTCT+AGG | + | chr5.1:57372570-57372589 | None:intergenic | 50.0% | |
| AGCAACGATGCTCCCATGCG+TGG | + | chr5.1:57371477-57371496 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 57371312 | 57372857 | 57371312 | ID=MS.gene91226 |
| chr5.1 | mRNA | 57371312 | 57372857 | 57371312 | ID=MS.gene91226.t1;Parent=MS.gene91226 |
| chr5.1 | exon | 57372642 | 57372857 | 57372642 | ID=MS.gene91226.t1.exon1;Parent=MS.gene91226.t1 |
| chr5.1 | CDS | 57372642 | 57372857 | 57372642 | ID=cds.MS.gene91226.t1;Parent=MS.gene91226.t1 |
| chr5.1 | exon | 57372215 | 57372409 | 57372215 | ID=MS.gene91226.t1.exon2;Parent=MS.gene91226.t1 |
| chr5.1 | CDS | 57372215 | 57372409 | 57372215 | ID=cds.MS.gene91226.t1;Parent=MS.gene91226.t1 |
| chr5.1 | exon | 57371312 | 57371878 | 57371312 | ID=MS.gene91226.t1.exon3;Parent=MS.gene91226.t1 |
| chr5.1 | CDS | 57371312 | 57371878 | 57371312 | ID=cds.MS.gene91226.t1;Parent=MS.gene91226.t1 |
| Gene Sequence |
| Protein sequence |
