Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95539.t1 | XP_003605900.1 | 98 | 735 | 11 | 3 | 1 | 732 | 1 | 734 | 0.00E+00 | 1324.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95539.t1 | Q94C37 | 77.2 | 707 | 141 | 6 | 29 | 732 | 32 | 721 | 2.1e-294 | 1012.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95539.t1 | G7JVZ2 | 98.0 | 735 | 11 | 3 | 1 | 732 | 1 | 734 | 0.0e+00 | 1324.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95539.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene95539 | 0.816898 | 4.36E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene95539 | 0.830042 | 3.67E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene95539 | 0.896713 | 2.83E-76 | -1.69E-46 |
| MS.gene050301 | MS.gene95539 | 0.843986 | 1.00E-58 | -1.69E-46 |
| MS.gene050581 | MS.gene95539 | 0.823494 | 1.34E-53 | -1.69E-46 |
| MS.gene050685 | MS.gene95539 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene95539 | 0.804485 | 2.11E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene95539 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene95539 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene95539 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene051789 | MS.gene95539 | 0.808459 | 3.06E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene95539 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene95539 | 0.898548 | 4.76E-77 | -1.69E-46 |
| MS.gene052188 | MS.gene95539 | 0.803297 | 3.73E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene95539 | 0.800479 | 1.41E-48 | -1.69E-46 |
| MS.gene052326 | MS.gene95539 | 0.81091 | 9.12E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene95539 | 0.820092 | 8.23E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene95539 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene95539 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene95539 | 0.821979 | 3.03E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene95539 | 0.848282 | 6.77E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene95539 | 0.821957 | 3.06E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene95539 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene95539 | 0.877468 | 6.14E-69 | -1.69E-46 |
| MS.gene054011 | MS.gene95539 | 0.882298 | 1.17E-70 | -1.69E-46 |
| MS.gene054012 | MS.gene95539 | 0.890065 | 1.38E-73 | -1.69E-46 |
| MS.gene054013 | MS.gene95539 | 0.894146 | 3.25E-75 | -1.69E-46 |
| MS.gene054123 | MS.gene95539 | 0.810494 | 1.12E-50 | -1.69E-46 |
| MS.gene054214 | MS.gene95539 | 0.876964 | 9.18E-69 | -1.69E-46 |
| MS.gene054618 | MS.gene95539 | 0.805095 | 1.58E-49 | -1.69E-46 |
| MS.gene055207 | MS.gene95539 | 0.819475 | 1.14E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene95539 | 0.844936 | 5.55E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene95539 | 0.812722 | 3.67E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene95539 | 0.823503 | 1.34E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene95539 | 0.819158 | 1.35E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene95539 | 0.873398 | 1.52E-67 | -1.69E-46 |
| MS.gene056191 | MS.gene95539 | 0.82185 | 3.24E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene95539 | 0.814846 | 1.25E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene95539 | 0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene056772 | MS.gene95539 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene95539 | 0.839548 | 1.48E-57 | -1.69E-46 |
| MS.gene056931 | MS.gene95539 | 0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene95539 | 0.803137 | 4.02E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene95539 | 0.814669 | 1.37E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene95539 | 0.810536 | 1.10E-50 | -1.69E-46 |
| MS.gene057752 | MS.gene95539 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene95539 | 0.824166 | 9.35E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene95539 | 0.807092 | 5.98E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene95539 | 0.835179 | 1.95E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene95539 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene95539 | 0.836946 | 6.94E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene95539 | 0.862883 | 3.70E-64 | -1.69E-46 |
| MS.gene059294 | MS.gene95539 | 0.861882 | 7.50E-64 | -1.69E-46 |
| MS.gene059518 | MS.gene95539 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene95539 | 0.800423 | 1.45E-48 | -1.69E-46 |
| MS.gene059692 | MS.gene95539 | 0.809901 | 1.50E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene95539 | 0.803556 | 3.30E-49 | -1.69E-46 |
| MS.gene059708 | MS.gene95539 | 0.816087 | 6.63E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene95539 | 0.816362 | 5.75E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene95539 | 0.83914 | 1.89E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene95539 | 0.879305 | 1.39E-69 | -1.69E-46 |
| MS.gene060005 | MS.gene95539 | 0.879239 | 1.47E-69 | -1.69E-46 |
| MS.gene06037 | MS.gene95539 | 0.845415 | 4.12E-59 | -1.69E-46 |
| MS.gene060559 | MS.gene95539 | 0.806524 | 7.89E-50 | -1.69E-46 |
| MS.gene060800 | MS.gene95539 | 0.829335 | 5.45E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene95539 | 0.853668 | 2.05E-61 | -1.69E-46 |
| MS.gene061112 | MS.gene95539 | 0.827469 | 1.54E-54 | -1.69E-46 |
| MS.gene061265 | MS.gene95539 | 0.827384 | 1.61E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95539.t1 | MTR_4g047800 | 97.687 | 735 | 13 | 3 | 1 | 732 | 1 | 734 | 0.0 | 1471 |
| MS.gene95539.t1 | MTR_2g088470 | 84.522 | 743 | 98 | 7 | 1 | 732 | 1 | 737 | 0.0 | 1252 |
| MS.gene95539.t1 | MTR_8g432540 | 54.618 | 747 | 297 | 11 | 17 | 731 | 74 | 810 | 0.0 | 786 |
| MS.gene95539.t1 | MTR_7g076080 | 57.020 | 698 | 265 | 11 | 60 | 731 | 90 | 778 | 0.0 | 785 |
| MS.gene95539.t1 | MTR_1g101280 | 50.877 | 741 | 312 | 12 | 28 | 727 | 21 | 750 | 0.0 | 728 |
| MS.gene95539.t1 | MTR_5g005600 | 50.943 | 742 | 307 | 17 | 11 | 727 | 7 | 716 | 0.0 | 686 |
| MS.gene95539.t1 | MTR_6g477820 | 47.275 | 734 | 335 | 13 | 44 | 732 | 2 | 728 | 0.0 | 676 |
| MS.gene95539.t1 | MTR_5g029320 | 43.325 | 764 | 382 | 15 | 5 | 731 | 33 | 782 | 0.0 | 622 |
| MS.gene95539.t1 | MTR_2g101720 | 44.313 | 677 | 339 | 10 | 65 | 730 | 143 | 792 | 0.0 | 602 |
| MS.gene95539.t1 | MTR_0198s0030 | 44.280 | 743 | 359 | 16 | 28 | 727 | 21 | 751 | 0.0 | 596 |
| MS.gene95539.t1 | MTR_7g427710 | 42.514 | 708 | 314 | 20 | 44 | 728 | 2 | 639 | 1.15e-176 | 520 |
| MS.gene95539.t1 | MTR_2g030570 | 35.584 | 711 | 405 | 15 | 48 | 727 | 7 | 695 | 2.41e-141 | 431 |
| MS.gene95539.t1 | MTR_2g030600 | 36.415 | 703 | 403 | 19 | 48 | 727 | 7 | 688 | 2.77e-137 | 420 |
| MS.gene95539.t1 | MTR_2g030660 | 33.778 | 675 | 398 | 15 | 63 | 729 | 17 | 650 | 1.80e-108 | 344 |
| MS.gene95539.t1 | MTR_2g083350 | 40.083 | 484 | 269 | 9 | 252 | 731 | 69 | 535 | 6.74e-104 | 329 |
| MS.gene95539.t1 | MTR_2g083330 | 39.908 | 436 | 250 | 6 | 299 | 731 | 103 | 529 | 4.89e-99 | 316 |
| MS.gene95539.t1 | MTR_7g427690 | 39.770 | 435 | 203 | 11 | 183 | 606 | 28 | 414 | 1.15e-93 | 299 |
| MS.gene95539.t1 | MTR_7g427700 | 36.842 | 323 | 152 | 7 | 44 | 359 | 2 | 279 | 1.30e-60 | 210 |
| MS.gene95539.t1 | MTR_7g427700 | 45.963 | 161 | 69 | 6 | 577 | 728 | 281 | 432 | 2.09e-28 | 119 |
| MS.gene95539.t1 | MTR_0653s0020 | 40.654 | 214 | 110 | 3 | 420 | 632 | 1 | 198 | 1.03e-47 | 167 |
| MS.gene95539.t1 | MTR_7g027265 | 48.905 | 137 | 68 | 1 | 44 | 180 | 2 | 136 | 2.85e-39 | 142 |
| MS.gene95539.t1 | MTR_5g046040 | 44.966 | 149 | 77 | 2 | 61 | 208 | 33 | 177 | 2.00e-35 | 138 |
| MS.gene95539.t1 | MTR_2g030690 | 31.488 | 289 | 182 | 6 | 443 | 727 | 1 | 277 | 3.59e-32 | 126 |
| MS.gene95539.t1 | MTR_1g105420 | 42.162 | 185 | 99 | 4 | 116 | 297 | 1 | 180 | 1.09e-31 | 123 |
| MS.gene95539.t1 | MTR_4g058970 | 21.717 | 769 | 421 | 26 | 45 | 728 | 9 | 681 | 1.59e-23 | 107 |
| MS.gene95539.t1 | MTR_6g027290 | 33.088 | 136 | 90 | 1 | 62 | 196 | 26 | 161 | 5.09e-22 | 94.4 |
| MS.gene95539.t1 | MTR_0653s0010 | 50.413 | 121 | 44 | 5 | 616 | 727 | 1 | 114 | 7.92e-22 | 91.7 |
| MS.gene95539.t1 | MTR_2g094520 | 22.778 | 540 | 308 | 18 | 64 | 576 | 23 | 480 | 1.60e-20 | 97.4 |
| MS.gene95539.t1 | MTR_7g027605 | 48.889 | 90 | 42 | 2 | 331 | 417 | 3 | 91 | 3.57e-19 | 83.2 |
| MS.gene95539.t1 | MTR_7g427670 | 46.341 | 82 | 33 | 1 | 115 | 196 | 32 | 102 | 1.63e-15 | 73.9 |
| MS.gene95539.t1 | MTR_2g451350 | 31.618 | 136 | 83 | 3 | 254 | 384 | 1 | 131 | 1.79e-15 | 74.3 |
| MS.gene95539.t1 | MTR_1g105425 | 49.296 | 71 | 31 | 2 | 42 | 107 | 82 | 152 | 3.04e-14 | 71.2 |
| MS.gene95539.t1 | MTR_2g030700 | 32.593 | 135 | 76 | 3 | 51 | 185 | 14 | 133 | 3.98e-14 | 71.2 |
| MS.gene95539.t1 | MTR_2g030720 | 32.836 | 134 | 72 | 3 | 51 | 184 | 14 | 129 | 1.39e-13 | 69.3 |
| MS.gene95539.t1 | MTR_2g030680 | 32.593 | 135 | 76 | 3 | 51 | 185 | 14 | 133 | 2.34e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.881 | 738 | 155 | 8 | 1 | 732 | 1 | 721 | 0.0 | 1122 |
| MS.gene95539.t1 | AT1G05230 | 75.610 | 738 | 155 | 9 | 1 | 732 | 1 | 719 | 0.0 | 1112 |
| MS.gene95539.t1 | AT4G04890 | 73.118 | 744 | 176 | 15 | 1 | 728 | 1 | 736 | 0.0 | 1076 |
| MS.gene95539.t1 | AT4G04890 | 73.118 | 744 | 176 | 15 | 1 | 728 | 1 | 736 | 0.0 | 1076 |
| MS.gene95539.t1 | AT4G21750 | 70.893 | 773 | 173 | 13 | 1 | 732 | 1 | 762 | 0.0 | 1072 |
| MS.gene95539.t1 | AT4G21750 | 70.893 | 773 | 173 | 13 | 1 | 732 | 1 | 762 | 0.0 | 1072 |
| MS.gene95539.t1 | AT4G21750 | 70.893 | 773 | 173 | 13 | 1 | 732 | 1 | 762 | 0.0 | 1072 |
| MS.gene95539.t1 | AT4G21750 | 70.893 | 773 | 173 | 13 | 1 | 732 | 1 | 762 | 0.0 | 1072 |
| MS.gene95539.t1 | AT1G05230 | 74.715 | 613 | 139 | 7 | 1 | 607 | 1 | 603 | 0.0 | 928 |
| MS.gene95539.t1 | AT3G61150 | 52.263 | 729 | 305 | 9 | 39 | 731 | 86 | 807 | 0.0 | 739 |
| MS.gene95539.t1 | AT2G32370 | 53.456 | 709 | 297 | 12 | 32 | 732 | 42 | 725 | 0.0 | 739 |
| MS.gene95539.t1 | AT4G00730 | 53.508 | 727 | 305 | 12 | 20 | 731 | 94 | 802 | 0.0 | 727 |
| MS.gene95539.t1 | AT1G73360 | 48.641 | 699 | 320 | 12 | 61 | 732 | 32 | 718 | 0.0 | 634 |
| MS.gene95539.t1 | AT1G17920 | 46.241 | 705 | 339 | 11 | 43 | 732 | 7 | 686 | 0.0 | 598 |
| MS.gene95539.t1 | AT1G17920 | 46.241 | 705 | 339 | 11 | 43 | 732 | 7 | 686 | 0.0 | 598 |
| MS.gene95539.t1 | AT5G52170 | 45.315 | 715 | 323 | 15 | 28 | 727 | 22 | 683 | 0.0 | 585 |
| MS.gene95539.t1 | AT5G52170 | 45.455 | 715 | 317 | 17 | 28 | 727 | 22 | 678 | 0.0 | 582 |
| MS.gene95539.t1 | AT5G52170 | 45.455 | 715 | 317 | 17 | 28 | 727 | 22 | 678 | 0.0 | 582 |
| MS.gene95539.t1 | AT5G46880 | 42.538 | 717 | 359 | 14 | 54 | 729 | 104 | 808 | 0.0 | 571 |
| MS.gene95539.t1 | AT5G46880 | 42.538 | 717 | 359 | 14 | 54 | 729 | 104 | 808 | 0.0 | 571 |
| MS.gene95539.t1 | AT5G46880 | 42.538 | 717 | 359 | 14 | 54 | 729 | 104 | 808 | 0.0 | 571 |
| MS.gene95539.t1 | AT1G79840 | 42.754 | 690 | 350 | 11 | 51 | 730 | 91 | 745 | 0.0 | 553 |
| MS.gene95539.t1 | AT1G79840 | 42.754 | 690 | 350 | 11 | 51 | 730 | 33 | 687 | 0.0 | 552 |
| MS.gene95539.t1 | AT1G79840 | 42.754 | 690 | 350 | 11 | 51 | 730 | 33 | 687 | 0.0 | 552 |
| MS.gene95539.t1 | AT1G79840 | 42.754 | 690 | 350 | 11 | 51 | 730 | 120 | 774 | 0.0 | 551 |
| MS.gene95539.t1 | AT4G17710 | 42.059 | 680 | 331 | 13 | 54 | 727 | 81 | 703 | 9.75e-175 | 518 |
| MS.gene95539.t1 | AT1G79840 | 43.416 | 562 | 277 | 10 | 51 | 603 | 91 | 620 | 1.24e-156 | 468 |
| MS.gene95539.t1 | AT3G03260 | 39.306 | 720 | 375 | 19 | 45 | 728 | 2 | 695 | 5.96e-156 | 469 |
| MS.gene95539.t1 | AT4G00730 | 48.729 | 472 | 207 | 9 | 28 | 482 | 103 | 556 | 8.67e-146 | 438 |
| MS.gene95539.t1 | AT4G25530 | 38.806 | 670 | 380 | 9 | 61 | 727 | 40 | 682 | 1.45e-145 | 442 |
| MS.gene95539.t1 | AT5G17320 | 36.185 | 713 | 396 | 19 | 59 | 730 | 24 | 718 | 7.90e-132 | 407 |
| MS.gene95539.t1 | AT1G34650 | 34.910 | 719 | 403 | 19 | 55 | 730 | 12 | 708 | 3.29e-124 | 387 |
| MS.gene95539.t1 | AT3G03260 | 39.421 | 553 | 297 | 15 | 45 | 575 | 2 | 538 | 1.73e-117 | 364 |
| MS.gene95539.t1 | AT1G79840 | 42.630 | 441 | 212 | 9 | 51 | 482 | 91 | 499 | 1.26e-110 | 345 |
| MS.gene95539.t1 | AT5G07260 | 28.312 | 551 | 311 | 21 | 128 | 664 | 11 | 491 | 2.60e-48 | 179 |
| MS.gene95539.t1 | AT5G07260 | 28.182 | 550 | 308 | 21 | 128 | 664 | 11 | 486 | 5.43e-48 | 178 |
| MS.gene95539.t1 | AT4G32880 | 22.594 | 748 | 411 | 25 | 64 | 731 | 15 | 674 | 4.94e-29 | 124 |
| MS.gene95539.t1 | AT1G52150 | 22.507 | 742 | 412 | 28 | 64 | 728 | 17 | 672 | 4.72e-26 | 115 |
| MS.gene95539.t1 | AT1G52150 | 22.507 | 742 | 412 | 28 | 64 | 728 | 17 | 672 | 4.77e-26 | 114 |
| MS.gene95539.t1 | AT1G52150 | 22.476 | 743 | 412 | 28 | 64 | 728 | 17 | 673 | 5.58e-26 | 114 |
| MS.gene95539.t1 | AT5G60690 | 35.714 | 98 | 55 | 2 | 64 | 153 | 25 | 122 | 7.56e-12 | 69.3 |
Find 189 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGCTAATTCTATTATTAT+TGG | 0.177935 | 4.3:+51093479 | None:intergenic |
| TGATTGCCAAAACCAATTTC+TGG | 0.191828 | 4.3:+51093581 | None:intergenic |
| TCCTTCCTTTGCTTGTCATC+TGG | 0.193302 | 4.3:+51094586 | None:intergenic |
| ACATACTCTTCCTCCCTTCT+TGG | 0.195793 | 4.3:+51091633 | None:intergenic |
| ATTCTTACGATTCCATTTCT+TGG | 0.235108 | 4.3:+51094766 | None:intergenic |
| CTCCCACCGCGTCCAGAAAT+TGG | 0.236347 | 4.3:-51093593 | MS.gene95539:CDS |
| ATGTTGCTCTGGCTTGAATT+TGG | 0.258103 | 4.3:+51090937 | None:intergenic |
| CCGCGTCCAGAAATTGGTTT+TGG | 0.273136 | 4.3:-51093587 | MS.gene95539:CDS |
| AAGGAGTTAAGCAGAGAGTT+AGG | 0.279953 | 4.3:-51094568 | MS.gene95539:CDS |
| CCTTCCTTTGCTTGTCATCT+GGG | 0.284990 | 4.3:+51094587 | None:intergenic |
| GCAGCTATGGAAGAGCTTAT+TGG | 0.288607 | 4.3:-51093455 | MS.gene95539:CDS |
| AGCCTTTGCAAGTCAAGTTT+TGG | 0.294391 | 4.3:-51094540 | MS.gene95539:CDS |
| CATGAAGGTGGTGCTGCTTC+TGG | 0.302796 | 4.3:-51094849 | MS.gene95539:CDS |
| CACAGATGGGTGATCCTCTT+TGG | 0.302834 | 4.3:-51093427 | MS.gene95539:CDS |
| GGCAGTTGTGGATGTGTCTT+TGG | 0.303977 | 4.3:-51092667 | MS.gene95539:CDS |
| TTTCGAAGCACTCGTCTTCT+CGG | 0.304296 | 4.3:+51094898 | None:intergenic |
| CAGCTATGGAAGAGCTTATT+GGG | 0.306565 | 4.3:-51093454 | MS.gene95539:CDS |
| ATCGACTTACATTTACTCTA+AGG | 0.323318 | 4.3:+51091208 | None:intergenic |
| CATTTGAAACCATTAGGTTT+AGG | 0.324939 | 4.3:+51093326 | None:intergenic |
| ACGATTCCATTTCTTGGATC+TGG | 0.342668 | 4.3:+51094772 | None:intergenic |
| GGCGGTGAAACTGGCGGAGG+AGG | 0.346393 | 4.3:-51090748 | MS.gene95539:CDS |
| AAAACTTGTGTTGGTGGAAC+AGG | 0.354087 | 4.3:+51091428 | None:intergenic |
| GAGCTGATAACATGAGGTAT+AGG | 0.357648 | 4.3:-51094347 | MS.gene95539:CDS |
| CAATCAAGGGATTGGTACTA+TGG | 0.361311 | 4.3:-51093564 | MS.gene95539:CDS |
| GCTATGAATGTAGTTCTAAA+TGG | 0.363093 | 4.3:-51090844 | MS.gene95539:CDS |
| ATTGCAAATGGACGCGATAC+TGG | 0.363551 | 4.3:-51091246 | MS.gene95539:CDS |
| AATGGAGTCGGCGGTGAAAC+TGG | 0.366633 | 4.3:-51090757 | MS.gene95539:CDS |
| CAGTGGGATATTCTTTCTAA+TGG | 0.366838 | 4.3:-51091294 | MS.gene95539:CDS |
| GGAAGAAGTGCTACATAATC+TGG | 0.371226 | 4.3:+51090814 | None:intergenic |
| GGTGAAACTGGCGGAGGAGG+GGG | 0.372896 | 4.3:-51090745 | MS.gene95539:CDS |
| ACAATACCAGGAGGTCTTCC+AGG | 0.379421 | 4.3:+51091479 | None:intergenic |
| TATTATTGGTTTGTCTGCTT+CGG | 0.380322 | 4.3:+51093493 | None:intergenic |
| CAGAAGCAGCACCACCTTCA+TGG | 0.382160 | 4.3:+51094850 | None:intergenic |
| AATACCTTTGAGTAACCATT+TGG | 0.385606 | 4.3:+51092576 | None:intergenic |
| AACAACATCCTGACGGGACC+TGG | 0.395943 | 4.3:-51092689 | MS.gene95539:CDS |
| CTCGTGAGAGTTACTTTGTA+AGG | 0.399857 | 4.3:-51092719 | MS.gene95539:CDS |
| AGGTCGTTTCCTCGTGGGAT+TGG | 0.405874 | 4.3:-51093350 | MS.gene95539:CDS |
| TGTGGTGGTCCAACAGCTAT+AGG | 0.411505 | 4.3:-51094294 | MS.gene95539:CDS |
| GTAGTATTAACATGTTGCTC+TGG | 0.413248 | 4.3:+51090926 | None:intergenic |
| AGAATCAAAGCTTCGCTGTC+TGG | 0.414774 | 4.3:-51090598 | MS.gene95539:CDS |
| GCTTCGCATTTGAAACCATT+AGG | 0.415897 | 4.3:+51093320 | None:intergenic |
| GTTAGCACTGGACATGCATT+TGG | 0.416621 | 4.3:-51091923 | MS.gene95539:CDS |
| AGATGTAGAAGAAGGCCTTC+TGG | 0.418212 | 4.3:-51092618 | MS.gene95539:CDS |
| GCTATCCTGCCTGATGGAAA+TGG | 0.423831 | 4.3:-51090781 | MS.gene95539:CDS |
| CAATGGTCAACGGTGTTTGC+TGG | 0.428126 | 4.3:-51093008 | MS.gene95539:CDS |
| TATGTAGCACTTCTTCCATC+AGG | 0.428228 | 4.3:-51090808 | MS.gene95539:CDS |
| CTTTGCTTGTCATCTGGGTG+TGG | 0.428946 | 4.3:+51094592 | None:intergenic |
| TTAATGAAGATGAATATGTT+AGG | 0.431451 | 4.3:-51093370 | MS.gene95539:CDS |
| AGCTGATAACATGAGGTATA+GGG | 0.432619 | 4.3:-51094346 | MS.gene95539:CDS |
| GCTGTTGGACCACCACAATT+AGG | 0.438343 | 4.3:+51094300 | None:intergenic |
| CGGTGAAACTGGCGGAGGAG+GGG | 0.441966 | 4.3:-51090746 | MS.gene95539:CDS |
| GGGATTGGACCTAAACCTAA+TGG | 0.443923 | 4.3:-51093335 | MS.gene95539:CDS |
| CATTTGATGAACATCATTTG+AGG | 0.446985 | 4.3:-51094263 | MS.gene95539:CDS |
| GAGGAAGAGTATGTTGAAAC+TGG | 0.447997 | 4.3:-51091624 | MS.gene95539:CDS |
| GGTCGGAATGTTTGTTGCCA+TGG | 0.448476 | 4.3:+51091847 | None:intergenic |
| GTGTTGTCAACTGGAGTGGC+AGG | 0.448507 | 4.3:-51092957 | MS.gene95539:CDS |
| AATGTTTCAGTCAAACCTCT+TGG | 0.448780 | 4.3:-51094985 | MS.gene95539:CDS |
| CTGCCTGATGGAAATGGAAA+TGG | 0.449683 | 4.3:-51090775 | MS.gene95539:CDS |
| CACACATGGACAACACTGTC+TGG | 0.450880 | 4.3:-51091551 | MS.gene95539:CDS |
| CACTCGTCTTCTCGGATTCG+AGG | 0.451326 | 4.3:+51094906 | None:intergenic |
| TATTTGTTGCAGTTTCTTCA+AGG | 0.453245 | 4.3:-51094620 | MS.gene95539:intron |
| AGAATTAGCTGTTGCAGCTA+TGG | 0.453837 | 4.3:-51093468 | MS.gene95539:CDS |
| GAGCCAGTGGAGATATTCTA+AGG | 0.455723 | 4.3:-51093532 | MS.gene95539:CDS |
| CCAACCGCTAAACTCTCTCT+TGG | 0.459578 | 4.3:-51090664 | MS.gene95539:CDS |
| TGCATTTGGTGCAAAACGTT+GGG | 0.460920 | 4.3:-51091909 | MS.gene95539:CDS |
| GAAATGGCGCACATTGCAAA+TGG | 0.463996 | 4.3:-51091258 | MS.gene95539:CDS |
| ACAATCTGCTTGTATAGATT+AGG | 0.464761 | 4.3:+51091944 | None:intergenic |
| CAGTCAAACCTCTTGGAAGC+TGG | 0.469434 | 4.3:-51094978 | MS.gene95539:CDS |
| TCAGCACCAGATCCAAGAAA+TGG | 0.471078 | 4.3:-51094778 | MS.gene95539:CDS |
| CTACATCTAGACGAAGGACT+AGG | 0.475265 | 4.3:+51092633 | None:intergenic |
| TGGACAACACTGTCTGGAAC+AGG | 0.477040 | 4.3:-51091545 | MS.gene95539:CDS |
| AGGAGTTAAGCAGAGAGTTA+GGG | 0.480092 | 4.3:-51094567 | MS.gene95539:CDS |
| CGTAAGAGTGTTGATGATCC+TGG | 0.485185 | 4.3:-51091497 | MS.gene95539:CDS |
| GACATTTCACCTATAGCTGT+TGG | 0.486224 | 4.3:+51094285 | None:intergenic |
| CTCTCACGAGTCGGCACAAG+AGG | 0.489363 | 4.3:+51092732 | None:intergenic |
| GTTTCAAATGCGAAGCTTCG+AGG | 0.490695 | 4.3:-51093313 | MS.gene95539:CDS |
| ACAACTGCCCAGGTCCCGTC+AGG | 0.492368 | 4.3:+51092681 | None:intergenic |
| GCAGACACAACATGAACGTT+CGG | 0.496911 | 4.3:-51094406 | MS.gene95539:intron |
| ATGTTTGAATAGTTTACCAC+TGG | 0.497257 | 4.3:+51093626 | None:intergenic |
| GCGGTGAAACTGGCGGAGGA+GGG | 0.500439 | 4.3:-51090747 | MS.gene95539:CDS |
| CATTTCCATTTCCATCAGGC+AGG | 0.501486 | 4.3:+51090776 | None:intergenic |
| ACTCCATTTCCATTTCCATC+AGG | 0.505159 | 4.3:+51090772 | None:intergenic |
| ATATATACCGCCAACATCTA+CGG | 0.505453 | 4.3:+51091826 | None:intergenic |
| ATTGGTACTATGGACATGTA+TGG | 0.511477 | 4.3:-51093554 | MS.gene95539:CDS |
| ATGTTAGGTCGTTTCCTCGT+GGG | 0.513468 | 4.3:-51093355 | MS.gene95539:CDS |
| GATGATCCTGGAAGACCTCC+TGG | 0.514883 | 4.3:-51091485 | MS.gene95539:CDS |
| GCTTATTGGGATGGCACAGA+TGG | 0.516003 | 4.3:-51093441 | MS.gene95539:CDS |
| CTCATTTGTTATCTATGCAC+CGG | 0.516034 | 4.3:-51090878 | MS.gene95539:CDS |
| GAGAGTGTAACAGATGCAAC+AGG | 0.516631 | 4.3:-51090901 | MS.gene95539:CDS |
| TGACGGGACCTGGGCAGTTG+TGG | 0.518596 | 4.3:-51092679 | MS.gene95539:CDS |
| TTAATTCAAGAGATGCCAAA+TGG | 0.518826 | 4.3:-51092591 | MS.gene95539:CDS |
| ACTGTGGAAGTGTTGTCAAC+TGG | 0.520701 | 4.3:-51092966 | MS.gene95539:CDS |
| AACCAAAACTTGACTTGCAA+AGG | 0.523378 | 4.3:+51094538 | None:intergenic |
| AGAACAGTAGCAGCTCCATC+AGG | 0.525133 | 4.3:+51093392 | None:intergenic |
| ATTGGTTTGTCTGCTTCGGT+CGG | 0.527793 | 4.3:+51093497 | None:intergenic |
| CAGCAAACACCGTTGACCAT+TGG | 0.528564 | 4.3:+51093009 | None:intergenic |
| TACAAGCAGATTGTTAGCAC+TGG | 0.528579 | 4.3:-51091935 | MS.gene95539:CDS |
| AAACAAAAGGACTCAGATGA+AGG | 0.533633 | 4.3:-51094512 | MS.gene95539:intron |
| GTTGAAACTGGCAGAGAGAA+TGG | 0.540573 | 4.3:-51091612 | MS.gene95539:CDS |
| GATATTCTAAGGTCAATTAG+TGG | 0.541194 | 4.3:-51093521 | MS.gene95539:CDS |
| CCAAAACCAATTTCTGGACG+CGG | 0.541993 | 4.3:+51093587 | None:intergenic |
| TGGTGGAGTTGTGCAAGAAA+TGG | 0.544913 | 4.3:-51091274 | MS.gene95539:CDS |
| TCTGAAAAGCGACGGTCAGA+AGG | 0.545806 | 4.3:+51090704 | None:intergenic |
| TTTGCATCATCTCTAATGGA+TGG | 0.546858 | 4.3:+51094949 | None:intergenic |
| GAAGACGAGTGCTTCGAAAG+TGG | 0.546911 | 4.3:-51094894 | MS.gene95539:CDS |
| TAGTGATAACAAACCAAGAA+GGG | 0.547679 | 4.3:-51091646 | MS.gene95539:CDS |
| AACATTCCGACCGTAGATGT+TGG | 0.548785 | 4.3:-51091836 | MS.gene95539:CDS |
| TCTGGACGCGGTGGGAGAGA+TGG | 0.548949 | 4.3:+51093599 | None:intergenic |
| CTTTAGATCGACAATGTGAA+AGG | 0.551620 | 4.3:-51091880 | MS.gene95539:CDS |
| TTAGTGATAACAAACCAAGA+AGG | 0.552241 | 4.3:-51091647 | MS.gene95539:intron |
| ACATGTAGAAGTGGATGAGA+GGG | 0.555176 | 4.3:-51091972 | MS.gene95539:CDS |
| TGGTTAAGTACTACACCTGA+TGG | 0.558663 | 4.3:-51093407 | MS.gene95539:CDS |
| TACATCTAGACGAAGGACTA+GGG | 0.561257 | 4.3:+51092634 | None:intergenic |
| TTTCAAATGCGAAGCTTCGA+GGG | 0.561654 | 4.3:-51093312 | MS.gene95539:CDS |
| TGGGATATTCTTTCTAATGG+TGG | 0.562144 | 4.3:-51091291 | MS.gene95539:CDS |
| CTTGGATCTGGTGCTGAGTG+TGG | 0.562215 | 4.3:+51094784 | None:intergenic |
| AGACACATCCACAACTGCCC+AGG | 0.563303 | 4.3:+51092671 | None:intergenic |
| TTCATAGCAACTATATCTAC+CGG | 0.565561 | 4.3:+51090859 | None:intergenic |
| GGCAGGATAGCAAATCCTGA+TGG | 0.565913 | 4.3:+51090793 | None:intergenic |
| ATGCATTTGGTGCAAAACGT+TGG | 0.567718 | 4.3:-51091910 | MS.gene95539:CDS |
| CAACCTTGTTGAGATTCTCA+TGG | 0.570569 | 4.3:-51093261 | MS.gene95539:CDS |
| ATTTGAGGCTTGAAAATGCA+AGG | 0.576070 | 4.3:-51094248 | MS.gene95539:CDS |
| CCAAGAGAGAGTTTAGCGGT+TGG | 0.578033 | 4.3:+51090664 | None:intergenic |
| TGTTGAGATTCTCATGGATG+TGG | 0.578448 | 4.3:-51093255 | MS.gene95539:intron |
| ACAACATCCTGACGGGACCT+GGG | 0.580233 | 4.3:-51092688 | MS.gene95539:CDS |
| TGACCTTAGAATATCTCCAC+TGG | 0.581106 | 4.3:+51093529 | None:intergenic |
| ACTCGTCTTCTCGGATTCGA+GGG | 0.584124 | 4.3:+51094907 | None:intergenic |
| AACATGTAGAAGTGGATGAG+AGG | 0.585664 | 4.3:-51091973 | MS.gene95539:CDS |
| CATGTAGAAGTGGATGAGAG+GGG | 0.587323 | 4.3:-51091971 | MS.gene95539:CDS |
| GCCAACATATATAGGTGACA+TGG | 0.588457 | 4.3:-51092000 | MS.gene95539:intron |
| TATGTTAGGTCGTTTCCTCG+TGG | 0.589599 | 4.3:-51093356 | MS.gene95539:CDS |
| GATGGAAATGGAAATGGAGT+CGG | 0.592474 | 4.3:-51090769 | MS.gene95539:CDS |
| CTTATTGGGATGGCACAGAT+GGG | 0.593281 | 4.3:-51093440 | MS.gene95539:CDS |
| CTTCGTCTAGATGTAGAAGA+AGG | 0.594581 | 4.3:-51092626 | MS.gene95539:CDS |
| GGATTTGCTATCCTGCCTGA+TGG | 0.594655 | 4.3:-51090787 | MS.gene95539:CDS |
| CATTTAGAACCAATGGTCAA+CGG | 0.597017 | 4.3:-51093018 | MS.gene95539:intron |
| GTGCTTCAACAGCACACACA+TGG | 0.598437 | 4.3:-51091565 | MS.gene95539:CDS |
| ACGAGTCGGCACAAGAGGTG+AGG | 0.599970 | 4.3:+51092737 | None:intergenic |
| ATTGTAAACAACATCCTGAC+GGG | 0.600101 | 4.3:-51092695 | MS.gene95539:CDS |
| CCCAGATGACAAGCAAAGGA+AGG | 0.600252 | 4.3:-51094587 | MS.gene95539:CDS |
| GATGCCAAATGGTTACTCAA+AGG | 0.601554 | 4.3:-51092580 | MS.gene95539:intron |
| CTGAAAAGCGACGGTCAGAA+GGG | 0.602407 | 4.3:+51090705 | None:intergenic |
| TGTTTCAAGAGCTGTGACTG+TGG | 0.603466 | 4.3:-51092982 | MS.gene95539:CDS |
| TGAAAGGCTTGCTAGCTCCA+TGG | 0.610773 | 4.3:-51091864 | MS.gene95539:CDS |
| ATATTCTAAGGTCAATTAGT+GGG | 0.613763 | 4.3:-51093520 | MS.gene95539:CDS |
| TATGGAAGAGCTTATTGGGA+TGG | 0.613912 | 4.3:-51093450 | MS.gene95539:CDS |
| AACCAATATCTGAAAAGCGA+CGG | 0.616052 | 4.3:+51090696 | None:intergenic |
| AAATGCAAGGCTAAGAGAAG+AGG | 0.619130 | 4.3:-51094235 | MS.gene95539:intron |
| CCAACATATATAGGTGACAT+GGG | 0.619612 | 4.3:-51091999 | MS.gene95539:intron |
| AAACCAATTTCTGGACGCGG+TGG | 0.619643 | 4.3:+51093590 | None:intergenic |
| TGATCCAAGAGAGAGTTTAG+CGG | 0.620008 | 4.3:+51090660 | None:intergenic |
| CACACCCAGATGACAAGCAA+AGG | 0.622325 | 4.3:-51094591 | MS.gene95539:CDS |
| GTCGGCGGTGAAACTGGCGG+AGG | 0.626051 | 4.3:-51090751 | MS.gene95539:CDS |
| GCTGCTTCTGGTGAAGAACA+AGG | 0.627125 | 4.3:-51094837 | MS.gene95539:CDS |
| TCTTGAATTAAGCAACCAGA+AGG | 0.628017 | 4.3:+51092603 | None:intergenic |
| CGAGTCGGCACAAGAGGTGA+GGG | 0.629753 | 4.3:+51092738 | None:intergenic |
| CGTCATCACTCTCACATCAT+CGG | 0.631515 | 4.3:+51091520 | None:intergenic |
| TCCTGCAGTGAAAACCATGA+AGG | 0.632264 | 4.3:-51094864 | MS.gene95539:CDS |
| AACCAATTTCTGGACGCGGT+GGG | 0.632731 | 4.3:+51093591 | None:intergenic |
| ATTCCGACCGTAGATGTTGG+CGG | 0.634409 | 4.3:-51091833 | MS.gene95539:intron |
| ATGGGTTGAACATGTAGAAG+TGG | 0.635474 | 4.3:-51091981 | MS.gene95539:CDS |
| ATGGACATGTATGGAGCCAG+TGG | 0.639261 | 4.3:-51093545 | MS.gene95539:CDS |
| ATGAATGTAGTTCTAAATGG+AGG | 0.639925 | 4.3:-51090841 | MS.gene95539:CDS |
| CTACAATGGTGCATTACAAG+TGG | 0.640429 | 4.3:-51092931 | MS.gene95539:intron |
| TATTGTAAACAACATCCTGA+CGG | 0.640849 | 4.3:-51092696 | MS.gene95539:CDS |
| TGTTGTCAACTGGAGTGGCA+GGG | 0.641410 | 4.3:-51092956 | MS.gene95539:CDS |
| GGAGTCGGCGGTGAAACTGG+CGG | 0.641968 | 4.3:-51090754 | MS.gene95539:CDS |
| GCTTCATGTCCTAATTGTGG+TGG | 0.643891 | 4.3:-51094309 | MS.gene95539:CDS |
| GGATCTGGTGCTGAGTGTGG+CGG | 0.645442 | 4.3:+51094787 | None:intergenic |
| ACAAAGTAACTCTCACGAGT+CGG | 0.646006 | 4.3:+51092723 | None:intergenic |
| AGCTTAGAGCTGATAACATG+AGG | 0.647699 | 4.3:-51094353 | MS.gene95539:CDS |
| ACGATGGCAGCGAAGTACGT+AGG | 0.649514 | 4.3:-51093653 | MS.gene95539:CDS |
| GCAGCACTAAGAACAATACC+AGG | 0.650728 | 4.3:+51091467 | None:intergenic |
| GGTGTAGTACTTAACCAAAG+AGG | 0.657817 | 4.3:+51093413 | None:intergenic |
| AATGCTTCATGTCCTAATTG+TGG | 0.661151 | 4.3:-51094312 | MS.gene95539:CDS |
| TGATAACAAACCAAGAAGGG+AGG | 0.664902 | 4.3:-51091643 | MS.gene95539:CDS |
| GGAACTGACCAGCTTCCAAG+AGG | 0.667277 | 4.3:+51094970 | None:intergenic |
| GATTGATAGAATTTCAACGA+TGG | 0.671483 | 4.3:-51093669 | MS.gene95539:CDS |
| GGAAGTGTTGTCAACTGGAG+TGG | 0.673358 | 4.3:-51092961 | MS.gene95539:CDS |
| GGAGTGGCAGGGAACTACAA+TGG | 0.679417 | 4.3:-51092945 | MS.gene95539:CDS |
| CATCCATGAGAATCTCAACA+AGG | 0.687534 | 4.3:+51093258 | None:intergenic |
| ATACCGCCAACATCTACGGT+CGG | 0.690999 | 4.3:+51091830 | None:intergenic |
| TAATGAGAACTCCAGAACTG+AGG | 0.692979 | 4.3:-51091393 | MS.gene95539:intron |
| GGAAATGGAAATGGAGTCGG+CGG | 0.694782 | 4.3:-51090766 | MS.gene95539:CDS |
| TGCAGTGAAAACCATGAAGG+TGG | 0.700352 | 4.3:-51094861 | MS.gene95539:CDS |
| CTTCTTCTACATCTAGACGA+AGG | 0.725595 | 4.3:+51092627 | None:intergenic |
| GAAGTACGTAGGAAAGCCAG+TGG | 0.728972 | 4.3:-51093642 | MS.gene95539:CDS |
| GGTTTAGGTCCAATCCCACG+AGG | 0.756148 | 4.3:+51093341 | None:intergenic |
| GCACTAAGAACAATACCAGG+AGG | 0.759585 | 4.3:+51091470 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATGTAAAAGAAAT+GGG | + | chr4.3:51093779-51093798 | None:intergenic | 10.0% |
| !! | TAAAAATAATGTAAAAGAAA+TGG | + | chr4.3:51093780-51093799 | None:intergenic | 10.0% |
| !! | TCAAATAGAAAATATAATAA+CGG | + | chr4.3:51094553-51094572 | None:intergenic | 10.0% |
| !!! | TTGATATATCATAAATTTTA+AGG | + | chr4.3:51093885-51093904 | None:intergenic | 10.0% |
| !! | ATTATAGTAATCAAGATATT+TGG | - | chr4.3:51093436-51093455 | MS.gene95539:CDS | 15.0% |
| !! | AAAATTAATGAGAAGAAACA+TGG | - | chr4.3:51092766-51092785 | MS.gene95539:intron | 20.0% |
| !! | AAGAAAATGGAAAATAAGAA+AGG | + | chr4.3:51091813-51091832 | None:intergenic | 20.0% |
| !! | ACAGCTAATTCTATTATTAT+TGG | + | chr4.3:51092093-51092112 | None:intergenic | 20.0% |
| !! | AGAAAATGGAAAATAAGAAA+GGG | + | chr4.3:51091812-51091831 | None:intergenic | 20.0% |
| !! | CAATTACAGTTGTAATATAA+AGG | + | chr4.3:51092470-51092489 | None:intergenic | 20.0% |
| !! | CTCTTTATAAATTTAATGGT+CGG | - | chr4.3:51091721-51091740 | MS.gene95539:intron | 20.0% |
| !! | GAGAAAATACTAGTATAATA+TGG | - | chr4.3:51090876-51090895 | MS.gene95539:CDS | 20.0% |
| !! | GCTTCTCTTTATAAATTTAA+TGG | - | chr4.3:51091717-51091736 | MS.gene95539:intron | 20.0% |
| !! | TTAATGAAGATGAATATGTT+AGG | - | chr4.3:51092199-51092218 | MS.gene95539:intron | 20.0% |
| !! | TTTAAATTACTGATGTAGTT+AGG | - | chr4.3:51094400-51094419 | MS.gene95539:CDS | 20.0% |
| !!! | ATAATAAAATGAGAGTACAA+AGG | - | chr4.3:51091438-51091457 | MS.gene95539:CDS | 20.0% |
| !!! | ATATCATGTCATTTATATTG+CGG | - | chr4.3:51092415-51092434 | MS.gene95539:intron | 20.0% |
| !!! | TGATTTTAAGCTACTTTTAT+AGG | + | chr4.3:51091477-51091496 | None:intergenic | 20.0% |
| !!! | TTAACCTTTTAAATAACAGT+GGG | - | chr4.3:51094259-51094278 | MS.gene95539:CDS | 20.0% |
| !!! | TTTAACCTTTTAAATAACAG+TGG | - | chr4.3:51094258-51094277 | MS.gene95539:CDS | 20.0% |
| !!! | TTTCCATTTTCTTTGTATAA+TGG | - | chr4.3:51091820-51091839 | MS.gene95539:intron | 20.0% |
| ! | ACAAGAAAAGATAGAGAAAA+TGG | + | chr4.3:51091398-51091417 | None:intergenic | 25.0% |
| ! | AGAAATTCAAAAACTTGTGT+TGG | + | chr4.3:51094153-51094172 | None:intergenic | 25.0% |
| ! | ATATATCAAGTGTTATCATG+TGG | - | chr4.3:51093896-51093915 | MS.gene95539:intron | 25.0% |
| ! | ATGAAGGAAAAAAAACTTGA+TGG | + | chr4.3:51090845-51090864 | None:intergenic | 25.0% |
| ! | ATGCACACTTAAATTCATAA+GGG | + | chr4.3:51092397-51092416 | None:intergenic | 25.0% |
| ! | CATAAATACCACTATTATGT+CGG | + | chr4.3:51093314-51093333 | None:intergenic | 25.0% |
| ! | CTATTTAACGTATTAAAACG+AGG | + | chr4.3:51092740-51092759 | None:intergenic | 25.0% |
| ! | GTTCCATTATACAAAGAAAA+TGG | + | chr4.3:51091826-51091845 | None:intergenic | 25.0% |
| ! | TAATGTTTGCCAACATATAT+AGG | - | chr4.3:51093561-51093580 | MS.gene95539:CDS | 25.0% |
| ! | TATCTAAGTGATAAGATGAT+TGG | + | chr4.3:51093390-51093409 | None:intergenic | 25.0% |
| ! | TATGCACACTTAAATTCATA+AGG | + | chr4.3:51092398-51092417 | None:intergenic | 25.0% |
| ! | TCTAAAAGTAATGGTTGTTA+TGG | + | chr4.3:51091689-51091708 | None:intergenic | 25.0% |
| ! | TTAAAACGAGGTTAAATACA+CGG | + | chr4.3:51092728-51092747 | None:intergenic | 25.0% |
| ! | TTATTTAACCCTAAGTCTTT+AGG | + | chr4.3:51091526-51091545 | None:intergenic | 25.0% |
| ! | TTTATATTGCGGCAAAATTA+TGG | - | chr4.3:51092426-51092445 | MS.gene95539:intron | 25.0% |
| !! | AAAAAACTTGATGGTAACAT+AGG | + | chr4.3:51090836-51090855 | None:intergenic | 25.0% |
| !! | AAAAACTTGATGGTAACATA+GGG | + | chr4.3:51090835-51090854 | None:intergenic | 25.0% |
| !! | ATATCCCACTGTTATTTAAA+AGG | + | chr4.3:51094266-51094285 | None:intergenic | 25.0% |
| !! | CATACTGCAATTTAAAATCA+TGG | - | chr4.3:51092498-51092517 | MS.gene95539:intron | 25.0% |
| !! | TTTAAAATGTAACCTTCGTT+TGG | - | chr4.3:51093083-51093102 | MS.gene95539:intron | 25.0% |
| !!! | AGTTTTGGTTTCAAAACAAA+AGG | - | chr4.3:51091044-51091063 | MS.gene95539:intron | 25.0% |
| !!! | ATATTCTAAGGTCAATTAGT+GGG | - | chr4.3:51092049-51092068 | MS.gene95539:intron | 25.0% |
| !!! | TGAGGTAATGTTTTTTACAT+AGG | - | chr4.3:51094194-51094213 | MS.gene95539:intron | 25.0% |
| AAAAAACATTACCTCAGTTC+TGG | + | chr4.3:51094190-51094209 | None:intergenic | 30.0% | |
| AATACCTTTGAGTAACCATT+TGG | + | chr4.3:51092996-51093015 | None:intergenic | 30.0% | |
| AATGCAATGTAAAGATCTTG+AGG | + | chr4.3:51094499-51094518 | None:intergenic | 30.0% | |
| AATGGAAAATAAGAAAGGGT+TGG | + | chr4.3:51091808-51091827 | None:intergenic | 30.0% | |
| AATTCAAAAACTTGTGTTGG+TGG | + | chr4.3:51094150-51094169 | None:intergenic | 30.0% | |
| ACAACAAAACCTAAAGACTT+AGG | - | chr4.3:51091514-51091533 | MS.gene95539:CDS | 30.0% | |
| ACAATCTGCTTGTATAGATT+AGG | + | chr4.3:51093628-51093647 | None:intergenic | 30.0% | |
| ATGTTTGAATAGTTTACCAC+TGG | + | chr4.3:51091946-51091965 | None:intergenic | 30.0% | |
| ATTCTTACGATTCCATTTCT+TGG | + | chr4.3:51090806-51090825 | None:intergenic | 30.0% | |
| CAACAAAACCTAAAGACTTA+GGG | - | chr4.3:51091515-51091534 | MS.gene95539:CDS | 30.0% | |
| CATTTGATGAACATCATTTG+AGG | - | chr4.3:51091306-51091325 | MS.gene95539:intron | 30.0% | |
| GATTGATAGAATTTCAACGA+TGG | - | chr4.3:51091900-51091919 | MS.gene95539:CDS | 30.0% | |
| GCAAGTTTGCAAAGTAAAAA+TGG | - | chr4.3:51093206-51093225 | MS.gene95539:intron | 30.0% | |
| TAGTGATAACAAACCAAGAA+GGG | - | chr4.3:51093923-51093942 | MS.gene95539:intron | 30.0% | |
| TATTGTAAACAACATCCTGA+CGG | - | chr4.3:51092873-51092892 | MS.gene95539:intron | 30.0% | |
| TTAATTCAAGAGATGCCAAA+TGG | - | chr4.3:51092978-51092997 | MS.gene95539:CDS | 30.0% | |
| TTAGTGATAACAAACCAAGA+AGG | - | chr4.3:51093922-51093941 | MS.gene95539:intron | 30.0% | |
| TTCATAGCAACTATATCTAC+CGG | + | chr4.3:51094713-51094732 | None:intergenic | 30.0% | |
| TTCTCTCAAAGAAAAGATGA+AGG | + | chr4.3:51090861-51090880 | None:intergenic | 30.0% | |
| TTTGCAAACTTGCATTTGAA+GGG | + | chr4.3:51093199-51093218 | None:intergenic | 30.0% | |
| ! | ACAATCTTAGTGATGATGTT+TGG | + | chr4.3:51093234-51093253 | None:intergenic | 30.0% |
| ! | AGAATGGTGATAAGTTTTTG+TGG | - | chr4.3:51093973-51093992 | MS.gene95539:intron | 30.0% |
| ! | ATCGACTTACATTTACTCTA+AGG | + | chr4.3:51094364-51094383 | None:intergenic | 30.0% |
| ! | CATTTGAAACCATTAGGTTT+AGG | + | chr4.3:51092246-51092265 | None:intergenic | 30.0% |
| ! | CTTTCTCTCTCTAAAAGTAA+TGG | + | chr4.3:51091698-51091717 | None:intergenic | 30.0% |
| ! | TATTTGTTGCAGTTTCTTCA+AGG | - | chr4.3:51090949-51090968 | MS.gene95539:intron | 30.0% |
| ! | TCAACCACAATTTAGAACTA+CGG | - | chr4.3:51093363-51093382 | MS.gene95539:CDS | 30.0% |
| !! | ATGAATGTAGTTCTAAATGG+AGG | - | chr4.3:51094728-51094747 | MS.gene95539:intron | 30.0% |
| !! | GATATTCTAAGGTCAATTAG+TGG | - | chr4.3:51092048-51092067 | MS.gene95539:intron | 30.0% |
| !! | GCTATGAATGTAGTTCTAAA+TGG | - | chr4.3:51094725-51094744 | MS.gene95539:intron | 30.0% |
| !! | TATTATTGGTTTGTCTGCTT+CGG | + | chr4.3:51092079-51092098 | None:intergenic | 30.0% |
| !! | TTTTTGCCATTTAGAACCAA+TGG | - | chr4.3:51092544-51092563 | MS.gene95539:intron | 30.0% |
| !!! | AAATTGGTTTTGGCAATCAA+GGG | - | chr4.3:51091992-51092011 | MS.gene95539:intron | 30.0% |
| !!! | GTTTTGTTTTGCTGTGTTTT+TGG | - | chr4.3:51091118-51091137 | MS.gene95539:intron | 30.0% |
| !!! | TAAGTCTTTAGGTTTTGTTG+TGG | + | chr4.3:51091515-51091534 | None:intergenic | 30.0% |
| !!! | TACATTTTAAAGCGATGATG+TGG | + | chr4.3:51093074-51093093 | None:intergenic | 30.0% |
| !!! | TTTTGCTGTGTTTTTGGTAA+AGG | - | chr4.3:51091124-51091143 | MS.gene95539:intron | 30.0% |
| AAACAAAAGGACTCAGATGA+AGG | - | chr4.3:51091057-51091076 | MS.gene95539:intron | 35.0% | |
| AACCAATATCTGAAAAGCGA+CGG | + | chr4.3:51094876-51094895 | None:intergenic | 35.0% | |
| AATGCTTCATGTCCTAATTG+TGG | - | chr4.3:51091257-51091276 | MS.gene95539:CDS | 35.0% | |
| AGAACCAACAAAATTAGCGA+CGG | + | chr4.3:51092703-51092722 | None:intergenic | 35.0% | |
| AGCTGATAACATGAGGTATA+GGG | - | chr4.3:51091223-51091242 | MS.gene95539:CDS | 35.0% | |
| ATATATACCGCCAACATCTA+CGG | + | chr4.3:51093746-51093765 | None:intergenic | 35.0% | |
| ATGAGTGCAGTTTCTTTAGA+AGG | + | chr4.3:51091607-51091626 | None:intergenic | 35.0% | |
| ATTGGTACTATGGACATGTA+TGG | - | chr4.3:51092015-51092034 | MS.gene95539:intron | 35.0% | |
| ATTGTAAACAACATCCTGAC+GGG | - | chr4.3:51092874-51092893 | MS.gene95539:intron | 35.0% | |
| CAGTGGGATATTCTTTCTAA+TGG | - | chr4.3:51094275-51094294 | MS.gene95539:CDS | 35.0% | |
| CATAGAACTCAGATACTCTA+CGG | - | chr4.3:51091646-51091665 | MS.gene95539:CDS | 35.0% | |
| CCAACATATATAGGTGACAT+GGG | - | chr4.3:51093570-51093589 | MS.gene95539:CDS | 35.0% | |
| CTTATGTTGCGAACATATTG+CGG | - | chr4.3:51093273-51093292 | MS.gene95539:CDS | 35.0% | |
| CTTTAGATCGACAATGTGAA+AGG | - | chr4.3:51093689-51093708 | MS.gene95539:intron | 35.0% | |
| CTTTGCAAACTTGCATTTGA+AGG | + | chr4.3:51093200-51093219 | None:intergenic | 35.0% | |
| GTAGTATTAACATGTTGCTC+TGG | + | chr4.3:51094646-51094665 | None:intergenic | 35.0% | |
| TAGAAAAATGCAAGAGAGTG+CGG | - | chr4.3:51094441-51094460 | MS.gene95539:intron | 35.0% | |
| TCTTGAATTAAGCAACCAGA+AGG | + | chr4.3:51092969-51092988 | None:intergenic | 35.0% | |
| TGAGTTATCCGACATAATAG+TGG | - | chr4.3:51093303-51093322 | MS.gene95539:CDS | 35.0% | |
| TGATTGCCAAAACCAATTTC+TGG | + | chr4.3:51091991-51092010 | None:intergenic | 35.0% | |
| TGGGATATTCTTTCTAATGG+TGG | - | chr4.3:51094278-51094297 | MS.gene95539:CDS | 35.0% | |
| TTTGCATCATCTCTAATGGA+TGG | + | chr4.3:51090623-51090642 | None:intergenic | 35.0% | |
| ! | AGGGTGAACAAAGTACTATA+TGG | + | chr4.3:51092378-51092397 | None:intergenic | 35.0% |
| ! | ATGGTGATAAGTTTTTGTGG+TGG | - | chr4.3:51093976-51093995 | MS.gene95539:intron | 35.0% |
| ! | ATTTCCGTCGCTAATTTTGT+TGG | - | chr4.3:51092696-51092715 | MS.gene95539:CDS | 35.0% |
| ! | ATTTGAGGCTTGAAAATGCA+AGG | - | chr4.3:51091321-51091340 | MS.gene95539:intron | 35.0% |
| ! | CATTTAGAACCAATGGTCAA+CGG | - | chr4.3:51092551-51092570 | MS.gene95539:intron | 35.0% |
| ! | GCAGTTTCTTTAGAAGGATA+TGG | + | chr4.3:51091601-51091620 | None:intergenic | 35.0% |
| ! | GTGTTTTGCATCATCTCTAA+TGG | + | chr4.3:51090627-51090646 | None:intergenic | 35.0% |
| !! | AAAGGGTTGGTATTCATTTG+TGG | + | chr4.3:51091795-51091814 | None:intergenic | 35.0% |
| !! | AACCAAAACTTGACTTGCAA+AGG | + | chr4.3:51091034-51091053 | None:intergenic | 35.0% |
| !! | CGGTGATAACGTTTTCTTTT+GGG | + | chr4.3:51090765-51090784 | None:intergenic | 35.0% |
| !! | CTCATTTGTTATCTATGCAC+CGG | - | chr4.3:51094691-51094710 | MS.gene95539:intron | 35.0% |
| !! | TTAGTGCTGCTACTTCTTTT+TGG | - | chr4.3:51094115-51094134 | MS.gene95539:intron | 35.0% |
| !!! | GAAATTGGTTTTGGCAATCA+AGG | - | chr4.3:51091991-51092010 | MS.gene95539:intron | 35.0% |
| !!! | TGTGTTTTTGGTAAAGGAGT+TGG | - | chr4.3:51091130-51091149 | MS.gene95539:intron | 35.0% |
| AAATGCAAGGCTAAGAGAAG+AGG | - | chr4.3:51091334-51091353 | MS.gene95539:intron | 40.0% | |
| AACATGTAGAAGTGGATGAG+AGG | - | chr4.3:51093596-51093615 | MS.gene95539:CDS | 40.0% | |
| AAGGAGTTAAGCAGAGAGTT+AGG | - | chr4.3:51091001-51091020 | MS.gene95539:intron | 40.0% | |
| ACAAAGTAACTCTCACGAGT+CGG | + | chr4.3:51092849-51092868 | None:intergenic | 40.0% | |
| ACATGTAGAAGTGGATGAGA+GGG | - | chr4.3:51093597-51093616 | MS.gene95539:CDS | 40.0% | |
| ACGATTCCATTTCTTGGATC+TGG | + | chr4.3:51090800-51090819 | None:intergenic | 40.0% | |
| ACTCCATTTCCATTTCCATC+AGG | + | chr4.3:51094800-51094819 | None:intergenic | 40.0% | |
| AGAATTAGCTGTTGCAGCTA+TGG | - | chr4.3:51092101-51092120 | MS.gene95539:intron | 40.0% | |
| AGCTTAGAGCTGATAACATG+AGG | - | chr4.3:51091216-51091235 | MS.gene95539:intron | 40.0% | |
| AGGAGTTAAGCAGAGAGTTA+GGG | - | chr4.3:51091002-51091021 | MS.gene95539:intron | 40.0% | |
| CAACCTTGTTGAGATTCTCA+TGG | - | chr4.3:51092308-51092327 | MS.gene95539:intron | 40.0% | |
| CAGCTATGGAAGAGCTTATT+GGG | - | chr4.3:51092115-51092134 | MS.gene95539:intron | 40.0% | |
| CATCCATGAGAATCTCAACA+AGG | + | chr4.3:51092314-51092333 | None:intergenic | 40.0% | |
| CCCATGTCACCTATATATGT+TGG | + | chr4.3:51093573-51093592 | None:intergenic | 40.0% | |
| CTACAATGGTGCATTACAAG+TGG | - | chr4.3:51092638-51092657 | MS.gene95539:CDS | 40.0% | |
| CTTCGTCTAGATGTAGAAGA+AGG | - | chr4.3:51092943-51092962 | MS.gene95539:CDS | 40.0% | |
| CTTCTTCTACATCTAGACGA+AGG | + | chr4.3:51092945-51092964 | None:intergenic | 40.0% | |
| GACATTTCACCTATAGCTGT+TGG | + | chr4.3:51091287-51091306 | None:intergenic | 40.0% | |
| GAGCTGATAACATGAGGTAT+AGG | - | chr4.3:51091222-51091241 | MS.gene95539:CDS | 40.0% | |
| GATGCCAAATGGTTACTCAA+AGG | - | chr4.3:51092989-51093008 | MS.gene95539:CDS | 40.0% | |
| GATGGAAATGGAAATGGAGT+CGG | - | chr4.3:51094800-51094819 | MS.gene95539:CDS | 40.0% | |
| GCCAACATATATAGGTGACA+TGG | - | chr4.3:51093569-51093588 | MS.gene95539:CDS | 40.0% | |
| GGTGTAGTACTTAACCAAAG+AGG | + | chr4.3:51092159-51092178 | None:intergenic | 40.0% | |
| TAATGAGAACTCCAGAACTG+AGG | - | chr4.3:51094176-51094195 | MS.gene95539:intron | 40.0% | |
| TACAAGCAGATTGTTAGCAC+TGG | - | chr4.3:51093634-51093653 | MS.gene95539:CDS | 40.0% | |
| TACATCTAGACGAAGGACTA+GGG | + | chr4.3:51092938-51092957 | None:intergenic | 40.0% | |
| TATGGAAGAGCTTATTGGGA+TGG | - | chr4.3:51092119-51092138 | MS.gene95539:intron | 40.0% | |
| TATGTAGCACTTCTTCCATC+AGG | - | chr4.3:51094761-51094780 | MS.gene95539:intron | 40.0% | |
| TGACCTTAGAATATCTCCAC+TGG | + | chr4.3:51092043-51092062 | None:intergenic | 40.0% | |
| TGATAACAAACCAAGAAGGG+AGG | - | chr4.3:51093926-51093945 | MS.gene95539:intron | 40.0% | |
| TGATCCAAGAGAGAGTTTAG+CGG | + | chr4.3:51094912-51094931 | None:intergenic | 40.0% | |
| TGGTTAAGTACTACACCTGA+TGG | - | chr4.3:51092162-51092181 | MS.gene95539:intron | 40.0% | |
| TGTTGAGATTCTCATGGATG+TGG | - | chr4.3:51092314-51092333 | MS.gene95539:intron | 40.0% | |
| TTACATTTGACGCAGAAGCT+AGG | - | chr4.3:51093141-51093160 | MS.gene95539:intron | 40.0% | |
| TTTCAAATGCGAAGCTTCGA+GGG | - | chr4.3:51092257-51092276 | MS.gene95539:intron | 40.0% | |
| ! | AAAACTTGTGTTGGTGGAAC+AGG | + | chr4.3:51094144-51094163 | None:intergenic | 40.0% |
| ! | AGCCTTTGCAAGTCAAGTTT+TGG | - | chr4.3:51091029-51091048 | MS.gene95539:intron | 40.0% |
| ! | ATGGGTTGAACATGTAGAAG+TGG | - | chr4.3:51093588-51093607 | MS.gene95539:CDS | 40.0% |
| ! | ATGGTTTTCACTGCAGGATT+TGG | + | chr4.3:51090703-51090722 | None:intergenic | 40.0% |
| ! | ATGTTGCTCTGGCTTGAATT+TGG | + | chr4.3:51094635-51094654 | None:intergenic | 40.0% |
| ! | CAATCAAGGGATTGGTACTA+TGG | - | chr4.3:51092005-51092024 | MS.gene95539:intron | 40.0% |
| ! | CTCGTGAGAGTTACTTTGTA+AGG | - | chr4.3:51092850-51092869 | MS.gene95539:intron | 40.0% |
| ! | GAGGAAGAGTATGTTGAAAC+TGG | - | chr4.3:51093945-51093964 | MS.gene95539:intron | 40.0% |
| ! | GCTTCGCATTTGAAACCATT+AGG | + | chr4.3:51092252-51092271 | None:intergenic | 40.0% |
| !! | ATGCATTTGGTGCAAAACGT+TGG | - | chr4.3:51093659-51093678 | MS.gene95539:CDS | 40.0% |
| !! | CGTTGACCATTGGTTCTAAA+TGG | + | chr4.3:51092553-51092572 | None:intergenic | 40.0% |
| !! | GCGGTGATAACGTTTTCTTT+TGG | + | chr4.3:51090766-51090785 | None:intergenic | 40.0% |
| !! | GGAAGAAGTGCTACATAATC+TGG | + | chr4.3:51094758-51094777 | None:intergenic | 40.0% |
| !! | TGCATTTGGTGCAAAACGTT+GGG | - | chr4.3:51093660-51093679 | MS.gene95539:CDS | 40.0% |
| !! | TGGACCGTAGTTCTAAATTG+TGG | + | chr4.3:51093370-51093389 | None:intergenic | 40.0% |
| !! | TTTGTTGCTTCTGAAACGCA+CGG | - | chr4.3:51093165-51093184 | MS.gene95539:intron | 40.0% |
| !!! | TAACGTTTTCTTTTGGGACG+TGG | + | chr4.3:51090759-51090778 | None:intergenic | 40.0% |
| AACATTCCGACCGTAGATGT+TGG | - | chr4.3:51093733-51093752 | MS.gene95539:intron | 45.0% | |
| ACATACTCTTCCTCCCTTCT+TGG | + | chr4.3:51093939-51093958 | None:intergenic | 45.0% | |
| ACTCGTACTTGGATCCCTTA+CGG | + | chr4.3:51091771-51091790 | None:intergenic | 45.0% | |
| AGAATCAAAGCTTCGCTGTC+TGG | - | chr4.3:51094971-51094990 | MS.gene95539:CDS | 45.0% | |
| AGATGTAGAAGAAGGCCTTC+TGG | - | chr4.3:51092951-51092970 | MS.gene95539:CDS | 45.0% | |
| ATGTTAGGTCGTTTCCTCGT+GGG | - | chr4.3:51092214-51092233 | MS.gene95539:intron | 45.0% | |
| ATTGCAAATGGACGCGATAC+TGG | - | chr4.3:51094323-51094342 | MS.gene95539:CDS | 45.0% | |
| CATGTAGAAGTGGATGAGAG+GGG | - | chr4.3:51093598-51093617 | MS.gene95539:CDS | 45.0% | |
| CATTTCCATTTCCATCAGGC+AGG | + | chr4.3:51094796-51094815 | None:intergenic | 45.0% | |
| CCTTCCTTTGCTTGTCATCT+GGG | + | chr4.3:51090985-51091004 | None:intergenic | 45.0% | |
| CGTCATCACTCTCACATCAT+CGG | + | chr4.3:51094052-51094071 | None:intergenic | 45.0% | |
| CTACATCTAGACGAAGGACT+AGG | + | chr4.3:51092939-51092958 | None:intergenic | 45.0% | |
| CTGCCTGATGGAAATGGAAA+TGG | - | chr4.3:51094794-51094813 | MS.gene95539:CDS | 45.0% | |
| CTTATTGGGATGGCACAGAT+GGG | - | chr4.3:51092129-51092148 | MS.gene95539:intron | 45.0% | |
| GAAATGGCGCACATTGCAAA+TGG | - | chr4.3:51094311-51094330 | MS.gene95539:CDS | 45.0% | |
| GAGCCAGTGGAGATATTCTA+AGG | - | chr4.3:51092037-51092056 | MS.gene95539:intron | 45.0% | |
| GCACTAAGAACAATACCAGG+AGG | + | chr4.3:51094102-51094121 | None:intergenic | 45.0% | |
| GCAGACACAACATGAACGTT+CGG | - | chr4.3:51091163-51091182 | MS.gene95539:intron | 45.0% | |
| GCAGCACTAAGAACAATACC+AGG | + | chr4.3:51094105-51094124 | None:intergenic | 45.0% | |
| GCAGCTATGGAAGAGCTTAT+TGG | - | chr4.3:51092114-51092133 | MS.gene95539:intron | 45.0% | |
| GCTTCATGTCCTAATTGTGG+TGG | - | chr4.3:51091260-51091279 | MS.gene95539:CDS | 45.0% | |
| GGGATTGGACCTAAACCTAA+TGG | - | chr4.3:51092234-51092253 | MS.gene95539:intron | 45.0% | |
| GTTATGGCTGTTGCACCATA+GGG | + | chr4.3:51091673-51091692 | None:intergenic | 45.0% | |
| GTTGAAACTGGCAGAGAGAA+TGG | - | chr4.3:51093957-51093976 | MS.gene95539:intron | 45.0% | |
| GTTTCAAATGCGAAGCTTCG+AGG | - | chr4.3:51092256-51092275 | MS.gene95539:intron | 45.0% | |
| TATGTTAGGTCGTTTCCTCG+TGG | - | chr4.3:51092213-51092232 | MS.gene95539:intron | 45.0% | |
| TCAGCACCAGATCCAAGAAA+TGG | - | chr4.3:51090791-51090810 | MS.gene95539:CDS | 45.0% | |
| TCATTTGTGGCACTCGTACT+TGG | + | chr4.3:51091782-51091801 | None:intergenic | 45.0% | |
| TCCTGCAGTGAAAACCATGA+AGG | - | chr4.3:51090705-51090724 | MS.gene95539:CDS | 45.0% | |
| TCCTTCCTTTGCTTGTCATC+TGG | + | chr4.3:51090986-51091005 | None:intergenic | 45.0% | |
| TGCAGTGAAAACCATGAAGG+TGG | - | chr4.3:51090708-51090727 | MS.gene95539:CDS | 45.0% | |
| TGGTGGAGTTGTGCAAGAAA+TGG | - | chr4.3:51094295-51094314 | MS.gene95539:CDS | 45.0% | |
| TGTTATGGCTGTTGCACCAT+AGG | + | chr4.3:51091674-51091693 | None:intergenic | 45.0% | |
| TGTTTCAAGAGCTGTGACTG+TGG | - | chr4.3:51092587-51092606 | MS.gene95539:CDS | 45.0% | |
| ! | ACCTTCATGGTTTTCACTGC+AGG | + | chr4.3:51090709-51090728 | None:intergenic | 45.0% |
| ! | CCAAAACCAATTTCTGGACG+CGG | + | chr4.3:51091985-51092004 | None:intergenic | 45.0% |
| ! | GAGAGTGTAACAGATGCAAC+AGG | - | chr4.3:51094668-51094687 | MS.gene95539:intron | 45.0% |
| ! | GTTAGCACTGGACATGCATT+TGG | - | chr4.3:51093646-51093665 | MS.gene95539:CDS | 45.0% |
| ! | TTTCGAAGCACTCGTCTTCT+CGG | + | chr4.3:51090674-51090693 | None:intergenic | 45.0% |
| !! | ACTGTGGAAGTGTTGTCAAC+TGG | - | chr4.3:51092603-51092622 | MS.gene95539:CDS | 45.0% |
| !! | ATTGGTTTGTCTGCTTCGGT+CGG | + | chr4.3:51092075-51092094 | None:intergenic | 45.0% |
| !! | CGTAAGAGTGTTGATGATCC+TGG | - | chr4.3:51094072-51094091 | MS.gene95539:intron | 45.0% |
| !! | GGTTTTGGCAATCAAGGGAT+TGG | - | chr4.3:51091997-51092016 | MS.gene95539:intron | 45.0% |
| !!! | GACCGTCGCTTTTCAGATAT+TGG | - | chr4.3:51094871-51094890 | MS.gene95539:CDS | 45.0% |
| ACAATACCAGGAGGTCTTCC+AGG | + | chr4.3:51094093-51094112 | None:intergenic | 50.0% | |
| ACTCGTCTTCTCGGATTCGA+GGG | + | chr4.3:51090665-51090684 | None:intergenic | 50.0% | |
| AGAACAGTAGCAGCTCCATC+AGG | + | chr4.3:51092180-51092199 | None:intergenic | 50.0% | |
| AGCACCATACAATCGCCGTA+AGG | - | chr4.3:51091753-51091772 | MS.gene95539:intron | 50.0% | |
| ATACCGCCAACATCTACGGT+CGG | + | chr4.3:51093742-51093761 | None:intergenic | 50.0% | |
| ATGGACATGTATGGAGCCAG+TGG | - | chr4.3:51092024-51092043 | MS.gene95539:intron | 50.0% | |
| ATTCCGACCGTAGATGTTGG+CGG | - | chr4.3:51093736-51093755 | MS.gene95539:intron | 50.0% | |
| CAATGGTCAACGGTGTTTGC+TGG | - | chr4.3:51092561-51092580 | MS.gene95539:intron | 50.0% | |
| CACACATGGACAACACTGTC+TGG | - | chr4.3:51094018-51094037 | MS.gene95539:intron | 50.0% | |
| CACACCCAGATGACAAGCAA+AGG | - | chr4.3:51090978-51090997 | MS.gene95539:intron | 50.0% | |
| CACAGATGGGTGATCCTCTT+TGG | - | chr4.3:51092142-51092161 | MS.gene95539:intron | 50.0% | |
| CAGATACTCTACGGTCCCTA+TGG | - | chr4.3:51091655-51091674 | MS.gene95539:intron | 50.0% | |
| CAGCAAACACCGTTGACCAT+TGG | + | chr4.3:51092563-51092582 | None:intergenic | 50.0% | |
| CAGTCAAACCTCTTGGAAGC+TGG | - | chr4.3:51090591-51090610 | MS.gene95539:CDS | 50.0% | |
| CATGACGCAGAACCAAACGA+AGG | + | chr4.3:51093098-51093117 | None:intergenic | 50.0% | |
| CCAACCGCTAAACTCTCTCT+TGG | - | chr4.3:51094905-51094924 | MS.gene95539:CDS | 50.0% | |
| CCAAGAGAGAGTTTAGCGGT+TGG | + | chr4.3:51094908-51094927 | None:intergenic | 50.0% | |
| CCCAGATGACAAGCAAAGGA+AGG | - | chr4.3:51090982-51091001 | MS.gene95539:intron | 50.0% | |
| CTGAAAAGCGACGGTCAGAA+GGG | + | chr4.3:51094867-51094886 | None:intergenic | 50.0% | |
| CTTTGCTTGTCATCTGGGTG+TGG | + | chr4.3:51090980-51090999 | None:intergenic | 50.0% | |
| GAAGACGAGTGCTTCGAAAG+TGG | - | chr4.3:51090675-51090694 | MS.gene95539:CDS | 50.0% | |
| GAAGTACGTAGGAAAGCCAG+TGG | - | chr4.3:51091927-51091946 | MS.gene95539:CDS | 50.0% | |
| GATCCCTTACGGCGATTGTA+TGG | + | chr4.3:51091760-51091779 | None:intergenic | 50.0% | |
| GCACCATACAATCGCCGTAA+GGG | - | chr4.3:51091754-51091773 | MS.gene95539:intron | 50.0% | |
| GCTATCCTGCCTGATGGAAA+TGG | - | chr4.3:51094788-51094807 | MS.gene95539:CDS | 50.0% | |
| GCTGCTTCTGGTGAAGAACA+AGG | - | chr4.3:51090732-51090751 | MS.gene95539:CDS | 50.0% | |
| GCTGTTGGACCACCACAATT+AGG | + | chr4.3:51091272-51091291 | None:intergenic | 50.0% | |
| GCTTATTGGGATGGCACAGA+TGG | - | chr4.3:51092128-51092147 | MS.gene95539:intron | 50.0% | |
| GGAAATGGAAATGGAGTCGG+CGG | - | chr4.3:51094803-51094822 | MS.gene95539:CDS | 50.0% | |
| GGCAGGATAGCAAATCCTGA+TGG | + | chr4.3:51094779-51094798 | None:intergenic | 50.0% | |
| GGCAGTTGTGGATGTGTCTT+TGG | - | chr4.3:51092902-51092921 | MS.gene95539:intron | 50.0% | |
| GTGCTTCAACAGCACACACA+TGG | - | chr4.3:51094004-51094023 | MS.gene95539:intron | 50.0% | |
| TCTGAAAAGCGACGGTCAGA+AGG | + | chr4.3:51094868-51094887 | None:intergenic | 50.0% | |
| TGTGGTGGTCCAACAGCTAT+AGG | - | chr4.3:51091275-51091294 | MS.gene95539:CDS | 50.0% | |
| TGTTGTCAACTGGAGTGGCA+GGG | - | chr4.3:51092613-51092632 | MS.gene95539:CDS | 50.0% | |
| ! | AAACCAATTTCTGGACGCGG+TGG | + | chr4.3:51091982-51092001 | None:intergenic | 50.0% |
| ! | AACCAATTTCTGGACGCGGT+GGG | + | chr4.3:51091981-51092000 | None:intergenic | 50.0% |
| ! | GGTCGGAATGTTTGTTGCCA+TGG | + | chr4.3:51093725-51093744 | None:intergenic | 50.0% |
| ! | TGGACAACACTGTCTGGAAC+AGG | - | chr4.3:51094024-51094043 | MS.gene95539:intron | 50.0% |
| !! | CCGCGTCCAGAAATTGGTTT+TGG | - | chr4.3:51091982-51092001 | MS.gene95539:CDS | 50.0% |
| !! | GGAAGTGTTGTCAACTGGAG+TGG | - | chr4.3:51092608-51092627 | MS.gene95539:CDS | 50.0% |
| !! | GGATTTGCTATCCTGCCTGA+TGG | - | chr4.3:51094782-51094801 | MS.gene95539:CDS | 50.0% |
| !! | TGAAAGGCTTGCTAGCTCCA+TGG | - | chr4.3:51093705-51093724 | MS.gene95539:intron | 50.0% |
| AACAACATCCTGACGGGACC+TGG | - | chr4.3:51092880-51092899 | MS.gene95539:intron | 55.0% | |
| AATGGAGTCGGCGGTGAAAC+TGG | - | chr4.3:51094812-51094831 | MS.gene95539:CDS | 55.0% | |
| ACAACATCCTGACGGGACCT+GGG | - | chr4.3:51092881-51092900 | MS.gene95539:intron | 55.0% | |
| ACGATGGCAGCGAAGTACGT+AGG | - | chr4.3:51091916-51091935 | MS.gene95539:CDS | 55.0% | |
| AGACACATCCACAACTGCCC+AGG | + | chr4.3:51092901-51092920 | None:intergenic | 55.0% | |
| AGGTCGTTTCCTCGTGGGAT+TGG | - | chr4.3:51092219-51092238 | MS.gene95539:intron | 55.0% | |
| CACTCGTCTTCTCGGATTCG+AGG | + | chr4.3:51090666-51090685 | None:intergenic | 55.0% | |
| CAGAAGCAGCACCACCTTCA+TGG | + | chr4.3:51090722-51090741 | None:intergenic | 55.0% | |
| GATGATCCTGGAAGACCTCC+TGG | - | chr4.3:51094084-51094103 | MS.gene95539:intron | 55.0% | |
| GGAACTGACCAGCTTCCAAG+AGG | + | chr4.3:51090602-51090621 | None:intergenic | 55.0% | |
| GGAGTGGCAGGGAACTACAA+TGG | - | chr4.3:51092624-51092643 | MS.gene95539:CDS | 55.0% | |
| GGTTTAGGTCCAATCCCACG+AGG | + | chr4.3:51092231-51092250 | None:intergenic | 55.0% | |
| GTGTTGTCAACTGGAGTGGC+AGG | - | chr4.3:51092612-51092631 | MS.gene95539:CDS | 55.0% | |
| ! | CTTGGATCTGGTGCTGAGTG+TGG | + | chr4.3:51090788-51090807 | None:intergenic | 55.0% |
| !! | CATGAAGGTGGTGCTGCTTC+TGG | - | chr4.3:51090720-51090739 | MS.gene95539:CDS | 55.0% |
| ACGAGTCGGCACAAGAGGTG+AGG | + | chr4.3:51092835-51092854 | None:intergenic | 60.0% | |
| CGAGTCGGCACAAGAGGTGA+GGG | + | chr4.3:51092834-51092853 | None:intergenic | 60.0% | |
| CTCCCACCGCGTCCAGAAAT+TGG | - | chr4.3:51091976-51091995 | MS.gene95539:CDS | 60.0% | |
| CTCTCACGAGTCGGCACAAG+AGG | + | chr4.3:51092840-51092859 | None:intergenic | 60.0% | |
| ! | GGATCTGGTGCTGAGTGTGG+CGG | + | chr4.3:51090785-51090804 | None:intergenic | 60.0% |
| ACAACTGCCCAGGTCCCGTC+AGG | + | chr4.3:51092891-51092910 | None:intergenic | 65.0% | |
| CGGTGAAACTGGCGGAGGAG+GGG | - | chr4.3:51094823-51094842 | MS.gene95539:CDS | 65.0% | |
| GCGGTGAAACTGGCGGAGGA+GGG | - | chr4.3:51094822-51094841 | MS.gene95539:CDS | 65.0% | |
| GGAGTCGGCGGTGAAACTGG+CGG | - | chr4.3:51094815-51094834 | MS.gene95539:CDS | 65.0% | |
| GGTGAAACTGGCGGAGGAGG+GGG | - | chr4.3:51094824-51094843 | MS.gene95539:CDS | 65.0% | |
| TCTGGACGCGGTGGGAGAGA+TGG | + | chr4.3:51091973-51091992 | None:intergenic | 65.0% | |
| TGACGGGACCTGGGCAGTTG+TGG | - | chr4.3:51092890-51092909 | MS.gene95539:intron | 65.0% | |
| GGCGGTGAAACTGGCGGAGG+AGG | - | chr4.3:51094821-51094840 | MS.gene95539:CDS | 70.0% | |
| GTCGGCGGTGAAACTGGCGG+AGG | - | chr4.3:51094818-51094837 | MS.gene95539:CDS | 70.0% | |
| ACTGGCGGAGGAGGGGGAGC+TGG | - | chr4.3:51094830-51094849 | MS.gene95539:CDS | 75.0% | |
| GGAGGAGGGGGAGCTGGTGC+TGG | - | chr4.3:51094836-51094855 | MS.gene95539:CDS | 75.0% | |
| ! | GGAGGGGGAGCTGGTGCTGG+TGG | - | chr4.3:51094839-51094858 | MS.gene95539:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 51090585 | 51095006 | 51090585 | ID=MS.gene95539 |
| chr4.3 | mRNA | 51090585 | 51095006 | 51090585 | ID=MS.gene95539.t1;Parent=MS.gene95539 |
| chr4.3 | exon | 51094774 | 51095006 | 51094774 | ID=MS.gene95539.t1.exon1;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51094774 | 51095006 | 51094774 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51094513 | 51094630 | 51094513 | ID=MS.gene95539.t1.exon2;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51094513 | 51094630 | 51094513 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51094236 | 51094424 | 51094236 | ID=MS.gene95539.t1.exon3;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51094236 | 51094424 | 51094236 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51093256 | 51093690 | 51093256 | ID=MS.gene95539.t1.exon4;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51093256 | 51093690 | 51093256 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51092932 | 51093033 | 51092932 | ID=MS.gene95539.t1.exon5;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51092932 | 51093033 | 51092932 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51092581 | 51092781 | 51092581 | ID=MS.gene95539.t1.exon6;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51092581 | 51092781 | 51092581 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51091834 | 51092008 | 51091834 | ID=MS.gene95539.t1.exon7;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51091834 | 51092008 | 51091834 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51091394 | 51091665 | 51091394 | ID=MS.gene95539.t1.exon8;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51091394 | 51091665 | 51091394 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51091218 | 51091313 | 51091218 | ID=MS.gene95539.t1.exon9;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51091218 | 51091313 | 51091218 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| chr4.3 | exon | 51090585 | 51090962 | 51090585 | ID=MS.gene95539.t1.exon10;Parent=MS.gene95539.t1 |
| chr4.3 | CDS | 51090585 | 51090962 | 51090585 | ID=cds.MS.gene95539.t1;Parent=MS.gene95539.t1 |
| Gene Sequence |
| Protein sequence |
