Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003252.01.T01 | XP_013467848.1 | 96.22 | 291 | 11 | 0 | 1 | 291 | 116 | 406 | 0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003252.01.T01 | Q9SF15 | 36.562 | 320 | 161 | 4 | 2 | 283 | 123 | 438 | 5.72E-63 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003252.01.T01 | A0A072VUZ2 | 96.220 | 291 | 11 | 0 | 1 | 291 | 116 | 406 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048205.01 | MsG0180003252.01 | 0.807354 | 5.267052e-50 | 2.927261e-47 |
| MsG0080048309.01 | MsG0180003252.01 | 0.812763 | 3.599457e-51 | 2.308217e-48 |
| MsG0080048982.01 | MsG0180003252.01 | 0.829011 | 6.535025e-55 | 6.604472e-52 |
| MsG0180000157.01 | MsG0180003252.01 | 0.832056 | 1.175033e-55 | 1.298653e-52 |
| MsG0180000271.01 | MsG0180003252.01 | 0.811143 | 8.111241e-51 | 4.982021e-48 |
| MsG0180000391.01 | MsG0180003252.01 | 0.816648 | 4.963286e-52 | 3.537168e-49 |
| MsG0180000673.01 | MsG0180003252.01 | 0.820103 | 8.184848e-53 | 6.417327e-50 |
| MsG0180001043.01 | MsG0180003252.01 | 0.836158 | 1.102546e-56 | 1.377856e-53 |
| MsG0180001712.01 | MsG0180003252.01 | 0.839499 | 1.527684e-57 | 2.113690e-54 |
| MsG0180001921.01 | MsG0180003252.01 | 0.820084 | 8.269857e-53 | 6.480212e-50 |
| MsG0180001922.01 | MsG0180003252.01 | 0.854814 | 9.576048e-62 | 2.165696e-58 |
| MsG0180002140.01 | MsG0180003252.01 | 0.837342 | 5.499647e-57 | 7.122440e-54 |
| MsG0180003088.01 | MsG0180003252.01 | 0.843153 | 1.668791e-58 | 2.587301e-55 |
| MsG0180003252.01 | MsG0180005106.01 | 0.825747 | 3.959990e-54 | 3.641564e-51 |
| MsG0180003252.01 | MsG0180005125.01 | 0.801462 | 8.903599e-49 | 4.254551e-46 |
| MsG0180003252.01 | MsG0180005160.01 | 0.814700 | 1.347733e-51 | 9.107502e-49 |
| MsG0180003252.01 | MsG0180005268.01 | 0.803397 | 3.554325e-49 | 1.784280e-46 |
| MsG0180003252.01 | MsG0180006016.01 | 0.812797 | 3.539130e-51 | 2.271382e-48 |
| MsG0180003252.01 | MsG0180006050.01 | 0.815492 | 8.994131e-52 | 6.210522e-49 |
| MsG0180003252.01 | MsG0280006411.01 | 0.804747 | 1.862377e-49 | 9.680048e-47 |
| MsG0180003252.01 | MsG0280006595.01 | 0.803794 | 2.941081e-49 | 1.491547e-46 |
| MsG0180003252.01 | MsG0280006682.01 | 0.806366 | 8.516785e-50 | 4.614160e-47 |
| MsG0180003252.01 | MsG0280007258.01 | 0.809375 | 1.952363e-50 | 1.144388e-47 |
| MsG0180003252.01 | MsG0280007272.01 | 0.825820 | 3.806258e-54 | 3.507358e-51 |
| MsG0180003252.01 | MsG0280007439.01 | 0.807498 | 4.908617e-50 | 2.738374e-47 |
| MsG0180003252.01 | MsG0280007549.01 | 0.823058 | 1.699270e-53 | 1.447600e-50 |
| MsG0180003252.01 | MsG0280007714.01 | 0.848287 | 6.748499e-60 | 1.232472e-56 |
| MsG0180003252.01 | MsG0280007775.01 | 0.803498 | 3.387342e-49 | 1.704886e-46 |
| MsG0180003252.01 | MsG0280007948.01 | 0.849330 | 3.466550e-60 | 6.549341e-57 |
| MsG0180003252.01 | MsG0280008104.01 | 0.804935 | 1.700826e-49 | 8.883427e-47 |
| MsG0180003252.01 | MsG0280009165.01 | 0.803216 | 3.875075e-49 | 1.936226e-46 |
| MsG0180003252.01 | MsG0280009598.01 | 0.825742 | 3.970306e-54 | 3.650503e-51 |
| MsG0180003252.01 | MsG0280010416.01 | 0.827465 | 1.541568e-54 | 1.489468e-51 |
| MsG0180003252.01 | MsG0280010423.01 | -0.804570 | 2.027393e-49 | 1.048893e-46 |
| MsG0180003252.01 | MsG0280011131.01 | 0.812813 | 3.510483e-51 | 2.253963e-48 |
| MsG0180003252.01 | MsG0280011191.01 | 0.804413 | 2.185775e-49 | 1.126246e-46 |
| MsG0180003252.01 | MsG0280011235.01 | 0.803052 | 4.190721e-49 | 2.085078e-46 |
| MsG0180003252.01 | MsG0380014561.01 | 0.815374 | 9.554525e-52 | 6.575752e-49 |
| MsG0180003252.01 | MsG0380015931.01 | 0.830610 | 2.664854e-55 | 2.821880e-52 |
| MsG0180003252.01 | MsG0380016223.01 | 0.822106 | 2.829128e-53 | 2.345537e-50 |
| MsG0180003252.01 | MsG0380017226.01 | 0.815161 | 1.065192e-51 | 7.287975e-49 |
| MsG0180003252.01 | MsG0380017286.01 | 0.849605 | 2.905415e-60 | 5.537606e-57 |
| MsG0180003252.01 | MsG0380017512.01 | 0.814467 | 1.517970e-51 | 1.019398e-48 |
| MsG0180003252.01 | MsG0380017941.01 | 0.804354 | 2.248877e-49 | 1.157041e-46 |
| MsG0180003252.01 | MsG0480018213.01 | 0.821653 | 3.601468e-53 | 2.947703e-50 |
| MsG0180003252.01 | MsG0480018321.01 | 0.836384 | 9.660944e-57 | 1.215519e-53 |
| MsG0180003252.01 | MsG0480018332.01 | 0.834185 | 3.469004e-56 | 4.085114e-53 |
| MsG0180003252.01 | MsG0480019289.01 | 0.822156 | 2.753484e-53 | 2.286155e-50 |
| MsG0180003252.01 | MsG0480019756.01 | 0.800137 | 1.659485e-48 | 7.668266e-46 |
| MsG0180003252.01 | MsG0480020445.01 | 0.806392 | 8.410801e-50 | 4.559673e-47 |
| MsG0180003252.01 | MsG0480020487.01 | 0.828841 | 7.182137e-55 | 7.222332e-52 |
| MsG0180003252.01 | MsG0480020843.01 | 0.801669 | 8.072352e-49 | 3.877604e-46 |
| MsG0180003252.01 | MsG0480021240.01 | 0.825636 | 4.207205e-54 | 3.856573e-51 |
| MsG0180003252.01 | MsG0480023270.01 | 0.815958 | 7.080964e-52 | 4.951868e-49 |
| MsG0180003252.01 | MsG0480023280.01 | 0.810884 | 9.232497e-51 | 5.632158e-48 |
| MsG0180003252.01 | MsG0480023417.01 | 0.825931 | 3.581534e-54 | 3.310839e-51 |
| MsG0180003252.01 | MsG0480023517.01 | 0.825678 | 4.111150e-54 | 3.773011e-51 |
| MsG0180003252.01 | MsG0480023923.01 | 0.821328 | 4.280799e-53 | 3.472094e-50 |
| MsG0180003252.01 | MsG0580024114.01 | 0.806364 | 8.527453e-50 | 4.619612e-47 |
| MsG0180003252.01 | MsG0580024581.01 | 0.806376 | 8.478027e-50 | 4.594301e-47 |
| MsG0180003252.01 | MsG0580024956.01 | 0.808172 | 3.528464e-50 | 2.003581e-47 |
| MsG0180003252.01 | MsG0580025278.01 | 0.859580 | 3.748841e-63 | 9.948687e-60 |
| MsG0180003252.01 | MsG0580025453.01 | 0.839503 | 1.524137e-57 | 2.108984e-54 |
| MsG0180003252.01 | MsG0580025497.01 | 0.803330 | 3.669843e-49 | 1.839029e-46 |
| MsG0180003252.01 | MsG0580025769.01 | 0.827159 | 1.825269e-54 | 1.747813e-51 |
| MsG0180003252.01 | MsG0580025907.01 | 0.807350 | 5.277434e-50 | 2.932692e-47 |
| MsG0180003252.01 | MsG0580027034.01 | 0.872126 | 4.039905e-67 | 1.670837e-63 |
| MsG0180003252.01 | MsG0580028185.01 | 0.818013 | 2.445772e-52 | 1.809416e-49 |
| MsG0180003252.01 | MsG0580028526.01 | 0.802177 | 6.347755e-49 | 3.088798e-46 |
| MsG0180003252.01 | MsG0580029658.01 | 0.815252 | 1.016951e-51 | 6.975242e-49 |
| MsG0180003252.01 | MsG0580029758.01 | 0.838676 | 2.496445e-57 | 3.368127e-54 |
| MsG0180003252.01 | MsG0680030303.01 | 0.801255 | 9.814320e-49 | 4.665479e-46 |
| MsG0180003252.01 | MsG0680030841.01 | 0.821321 | 4.297540e-53 | 3.484828e-50 |
| MsG0180003252.01 | MsG0680031459.01 | 0.827011 | 1.979530e-54 | 1.887281e-51 |
| MsG0180003252.01 | MsG0680031536.01 | 0.819179 | 1.330184e-52 | 1.016269e-49 |
| MsG0180003252.01 | MsG0680031538.01 | 0.820800 | 5.664337e-53 | 4.527151e-50 |
| MsG0180003252.01 | MsG0680031694.01 | 0.808925 | 2.436657e-50 | 1.411110e-47 |
| MsG0180003252.01 | MsG0680031712.01 | 0.833785 | 4.369526e-56 | 5.084790e-53 |
| MsG0180003252.01 | MsG0680032641.01 | 0.835759 | 1.391407e-56 | 1.717975e-53 |
| MsG0180003252.01 | MsG0680034672.01 | 0.806795 | 6.916457e-50 | 3.788530e-47 |
| MsG0180003252.01 | MsG0680035582.01 | 0.831461 | 1.647767e-55 | 1.789393e-52 |
| MsG0180003252.01 | MsG0780036550.01 | 0.811861 | 5.663374e-51 | 3.545076e-48 |
| MsG0180003252.01 | MsG0780036853.01 | 0.803410 | 3.532525e-49 | 1.773900e-46 |
| MsG0180003252.01 | MsG0780038444.01 | 0.823908 | 1.074952e-53 | 9.379883e-51 |
| MsG0180003252.01 | MsG0780038911.01 | 0.804185 | 2.439363e-49 | 1.249541e-46 |
| MsG0180003252.01 | MsG0780038930.01 | 0.803760 | 2.989569e-49 | 1.514824e-46 |
| MsG0180003252.01 | MsG0780039875.01 | 0.808098 | 3.660285e-50 | 2.074219e-47 |
| MsG0180003252.01 | MsG0780040125.01 | 0.802141 | 6.457256e-49 | 3.139210e-46 |
| MsG0180003252.01 | MsG0780040679.01 | 0.828496 | 8.703473e-55 | 8.665926e-52 |
| MsG0180003252.01 | MsG0780040742.01 | 0.800241 | 1.580949e-48 | 7.324453e-46 |
| MsG0180003252.01 | MsG0780040758.01 | 0.840783 | 7.060824e-58 | 1.016613e-54 |
| MsG0180003252.01 | MsG0880042053.01 | 0.806913 | 6.531000e-50 | 3.588322e-47 |
| MsG0180003252.01 | MsG0880043082.01 | 0.807342 | 5.297403e-50 | 2.943207e-47 |
| MsG0180003252.01 | MsG0880043208.01 | 0.804788 | 1.826203e-49 | 9.501630e-47 |
| MsG0180003252.01 | MsG0880043288.01 | 0.816403 | 5.630101e-52 | 3.985552e-49 |
| MsG0180003252.01 | MsG0880044409.01 | 0.806361 | 8.538133e-50 | 4.625096e-47 |
| MsG0180003252.01 | MsG0880044546.01 | 0.820356 | 7.164015e-53 | 5.655557e-50 |
| MsG0180003252.01 | MsG0880045106.01 | 0.830945 | 2.206593e-55 | 2.359798e-52 |
| MsG0180003252.01 | MsG0880046058.01 | 0.848586 | 5.575758e-60 | 1.028142e-56 |
| MsG0180003252.01 | MsG0880046209.01 | 0.823925 | 1.065266e-53 | 9.299603e-51 |
| MsG0180003252.01 | MsG0880046329.01 | 0.811564 | 6.571906e-51 | 4.081662e-48 |
| MsG0180003252.01 | MsG0880046342.01 | 0.839387 | 1.633152e-57 | 2.252034e-54 |
| MsG0180003252.01 | MsG0880046377.01 | 0.802046 | 6.756972e-49 | 3.276935e-46 |
| MsG0180003252.01 | MsG0880046404.01 | 0.815084 | 1.107988e-51 | 7.565110e-49 |
| MsG0180003252.01 | MsG0880046731.01 | 0.817004 | 4.128910e-52 | 2.971515e-49 |
| MsG0180003252.01 | MsG0880046733.01 | 0.823008 | 1.745176e-53 | 1.484586e-50 |
| MsG0180003252.01 | MsG0880047019.01 | 0.822421 | 2.389915e-53 | 1.999517e-50 |
| MsG0180003252.01 | MsG0880047143.01 | 0.808330 | 3.265895e-50 | 1.862183e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003252.01.T01 | MTR_1g056910 | 96.220 | 291 | 11 | 0 | 1 | 291 | 116 | 406 | 0.0 | 572 |
| MsG0180003252.01.T01 | MTR_4g051515 | 42.756 | 283 | 155 | 5 | 6 | 283 | 123 | 403 | 3.84e-65 | 210 |
| MsG0180003252.01.T01 | MTR_7g106340 | 33.779 | 299 | 184 | 5 | 2 | 290 | 122 | 416 | 5.98e-47 | 162 |
| MsG0180003252.01.T01 | MTR_1g056880 | 36.777 | 242 | 147 | 4 | 44 | 284 | 190 | 426 | 1.91e-43 | 154 |
| MsG0180003252.01.T01 | MTR_1g056870 | 36.364 | 242 | 148 | 4 | 44 | 284 | 190 | 426 | 6.20e-41 | 147 |
| MsG0180003252.01.T01 | MTR_2g087350 | 37.063 | 286 | 169 | 6 | 1 | 284 | 119 | 395 | 1.20e-38 | 140 |
| MsG0180003252.01.T01 | MTR_1g056840 | 31.818 | 242 | 133 | 6 | 44 | 284 | 190 | 400 | 5.25e-29 | 114 |
| MsG0180003252.01.T01 | MTR_1g037070 | 45.122 | 82 | 44 | 1 | 154 | 235 | 1 | 81 | 6.98e-15 | 68.9 |
| MsG0180003252.01.T01 | MTR_6g462610 | 32.298 | 161 | 95 | 4 | 6 | 162 | 7 | 157 | 4.06e-13 | 66.6 |
| MsG0180003252.01.T01 | MTR_5g077510 | 25.939 | 293 | 192 | 9 | 7 | 288 | 155 | 433 | 4.07e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003252.01.T01 | AT3G11840 | 36.562 | 320 | 161 | 4 | 2 | 283 | 123 | 438 | 5.83e-64 | 208 |
| MsG0180003252.01.T01 | AT2G35930 | 35.932 | 295 | 174 | 7 | 2 | 290 | 123 | 408 | 3.03e-46 | 160 |
| MsG0180003252.01.T01 | AT3G52450 | 33.992 | 253 | 154 | 6 | 43 | 289 | 185 | 430 | 3.85e-36 | 134 |
Find 31 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATTATGGAAATATTTA+AGG | 0.164476 | 1:-59136697 | MsG0180003252.01.T01:CDS |
| CACAATTCTTTCGAAGAATT+CGG | 0.199521 | 1:+59137151 | None:intergenic |
| ACTAATAGAGATTGAATTAA+TGG | 0.226085 | 1:-59137006 | MsG0180003252.01.T01:CDS |
| TTTACTATGTTGTTGTCCTT+TGG | 0.288354 | 1:-59137072 | MsG0180003252.01.T01:CDS |
| TTACTATGTTGTTGTCCTTT+GGG | 0.311153 | 1:-59137071 | MsG0180003252.01.T01:CDS |
| TTCTGCTACAAAGATGGTTT+TGG | 0.311443 | 1:-59136796 | MsG0180003252.01.T01:CDS |
| ATTTGAAAATAATCAAATAC+TGG | 0.314035 | 1:-59137297 | MsG0180003252.01.T01:CDS |
| GTATTTGAAAGATAAAATTA+TGG | 0.351019 | 1:-59136709 | MsG0180003252.01.T01:CDS |
| GTTGTCCTTTGGGAAGAAAT+AGG | 0.365624 | 1:-59137061 | MsG0180003252.01.T01:CDS |
| TTAAGGCTCATTCTGAGGTT+TGG | 0.366681 | 1:-59136680 | MsG0180003252.01.T01:CDS |
| GTTGACTGAGAGATTCTTCA+AGG | 0.402733 | 1:-59136874 | MsG0180003252.01.T01:CDS |
| TTGGATGAGATGTTAAAAGT+TGG | 0.415505 | 1:-59136777 | MsG0180003252.01.T01:CDS |
| GCTCAAGAGTTTAATGCAGT+TGG | 0.418910 | 1:-59137501 | None:intergenic |
| ATTGTGAAAGTTCTAAGAAA+TGG | 0.433892 | 1:-59137134 | MsG0180003252.01.T01:CDS |
| ACAATTCTTTCGAAGAATTC+GGG | 0.437523 | 1:+59137152 | None:intergenic |
| CATTTGTGTTCTTGTGCAAA+TGG | 0.445659 | 1:-59136936 | MsG0180003252.01.T01:CDS |
| GGGAAGAAATAGGTTAATGA+TGG | 0.446476 | 1:-59137051 | MsG0180003252.01.T01:CDS |
| ATGAACATAATCATCTCTTT+CGG | 0.450958 | 1:+59137422 | None:intergenic |
| AGAATCACAGAACTCACATT+TGG | 0.479777 | 1:-59136969 | MsG0180003252.01.T01:CDS |
| GAAGGTATTGAAGAAGCTCT+TGG | 0.482882 | 1:-59137368 | MsG0180003252.01.T01:CDS |
| AGAGATGTTTGAGGAAAACA+AGG | 0.510086 | 1:+59136648 | None:intergenic |
| AGATTCTTCACTTCTTCTGT+AGG | 0.513088 | 1:+59137323 | None:intergenic |
| AATATTTAAGGCTCATTCTG+AGG | 0.547702 | 1:-59136685 | MsG0180003252.01.T01:CDS |
| CTTCAAGGTTTCAATGACAG+TGG | 0.556204 | 1:-59136859 | MsG0180003252.01.T01:CDS |
| AAATACTGGATTCTTTAACA+TGG | 0.565062 | 1:-59137283 | MsG0180003252.01.T01:CDS |
| CTAGCATAGAGAGATGTTTG+AGG | 0.570126 | 1:+59136639 | None:intergenic |
| CTCAAACATCTCTCTATGCT+AGG | 0.570560 | 1:-59136638 | MsG0180003252.01.T01:CDS |
| ATTAACCTATTTCTTCCCAA+AGG | 0.586930 | 1:+59137056 | None:intergenic |
| AGGTTAATGATGGTTGAAGC+TGG | 0.636668 | 1:-59137041 | MsG0180003252.01.T01:CDS |
| GGTTACTGTGAAATCGCATG+CGG | 0.706124 | 1:-59137234 | MsG0180003252.01.T01:CDS |
| AATGGTGTAATAACACAACA+AGG | 0.719258 | 1:-59137116 | MsG0180003252.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTATGGAAATATTTA+AGG | - | Chr1:59137426-59137445 | MsG0180003252.01.T01:CDS | 10.0% |
| !! | ATTTGAAAATAATCAAATAC+TGG | - | Chr1:59136826-59136845 | MsG0180003252.01.T01:CDS | 15.0% |
| !! | GTATTTGAAAGATAAAATTA+TGG | - | Chr1:59137414-59137433 | MsG0180003252.01.T01:CDS | 15.0% |
| !! | ACTAATAGAGATTGAATTAA+TGG | - | Chr1:59137117-59137136 | MsG0180003252.01.T01:CDS | 20.0% |
| !! | ATAGTTGATTGTTACAAAAA+AGG | - | Chr1:59136722-59136741 | MsG0180003252.01.T01:CDS | 20.0% |
| ! | AAAAAAGGCGAAATTTATGA+AGG | - | Chr1:59136737-59136756 | MsG0180003252.01.T01:CDS | 25.0% |
| ! | AAATACTGGATTCTTTAACA+TGG | - | Chr1:59136840-59136859 | MsG0180003252.01.T01:CDS | 25.0% |
| ! | ATGAACATAATCATCTCTTT+CGG | + | Chr1:59136704-59136723 | None:intergenic | 25.0% |
| !! | AGAAAGATTTTGTTGGAAAA+TGG | - | Chr1:59136674-59136693 | MsG0180003252.01.T01:CDS | 25.0% |
| !! | TAAATTTTCTGCTACAAAGA+TGG | - | Chr1:59137321-59137340 | MsG0180003252.01.T01:CDS | 25.0% |
| !!! | ATTGTGAAAGTTCTAAGAAA+TGG | - | Chr1:59136989-59137008 | MsG0180003252.01.T01:CDS | 25.0% |
| AATGGTGTAATAACACAACA+AGG | - | Chr1:59137007-59137026 | MsG0180003252.01.T01:CDS | 30.0% | |
| ACAATTCTTTCGAAGAATTC+GGG | + | Chr1:59136974-59136993 | None:intergenic | 30.0% | |
| CACAATTCTTTCGAAGAATT+CGG | + | Chr1:59136975-59136994 | None:intergenic | 30.0% | |
| TTACTATGTTGTTGTCCTTT+GGG | - | Chr1:59137052-59137071 | MsG0180003252.01.T01:CDS | 30.0% | |
| TTGGATGAGATGTTAAAAGT+TGG | - | Chr1:59137346-59137365 | MsG0180003252.01.T01:CDS | 30.0% | |
| TTTACTATGTTGTTGTCCTT+TGG | - | Chr1:59137051-59137070 | MsG0180003252.01.T01:CDS | 30.0% | |
| ! | AATATTTAAGGCTCATTCTG+AGG | - | Chr1:59137438-59137457 | MsG0180003252.01.T01:CDS | 30.0% |
| ! | ATTAACCTATTTCTTCCCAA+AGG | + | Chr1:59137070-59137089 | None:intergenic | 30.0% |
| ! | GAGCAATAGAAAGATTTTGT+TGG | - | Chr1:59136667-59136686 | MsG0180003252.01.T01:CDS | 30.0% |
| !!! | TTTCAGTTTTTGAGTCATCA+AGG | - | Chr1:59137214-59137233 | MsG0180003252.01.T01:CDS | 30.0% |
| AGAATCACAGAACTCACATT+TGG | - | Chr1:59137154-59137173 | MsG0180003252.01.T01:CDS | 35.0% | |
| AGAGATGTTTGAGGAAAACA+AGG | + | Chr1:59137478-59137497 | None:intergenic | 35.0% | |
| AGATTCTTCACTTCTTCTGT+AGG | + | Chr1:59136803-59136822 | None:intergenic | 35.0% | |
| AGTTTCCGAGATGAAAAACT+CGG | - | Chr1:59136868-59136887 | MsG0180003252.01.T01:CDS | 35.0% | |
| CATTTGTGTTCTTGTGCAAA+TGG | - | Chr1:59137187-59137206 | MsG0180003252.01.T01:CDS | 35.0% | |
| GGGAAGAAATAGGTTAATGA+TGG | - | Chr1:59137072-59137091 | MsG0180003252.01.T01:CDS | 35.0% | |
| ! | AGTAACCGAGTTTTTCATCT+CGG | + | Chr1:59136876-59136895 | None:intergenic | 35.0% |
| ! | TTCTGCTACAAAGATGGTTT+TGG | - | Chr1:59137327-59137346 | MsG0180003252.01.T01:CDS | 35.0% |
| AGGTTAATGATGGTTGAAGC+TGG | - | Chr1:59137082-59137101 | MsG0180003252.01.T01:CDS | 40.0% | |
| CTAGCATAGAGAGATGTTTG+AGG | + | Chr1:59137487-59137506 | None:intergenic | 40.0% | |
| CTCAAACATCTCTCTATGCT+AGG | - | Chr1:59137485-59137504 | MsG0180003252.01.T01:CDS | 40.0% | |
| CTTCAAGGTTTCAATGACAG+TGG | - | Chr1:59137264-59137283 | MsG0180003252.01.T01:CDS | 40.0% | |
| GTTGACTGAGAGATTCTTCA+AGG | - | Chr1:59137249-59137268 | MsG0180003252.01.T01:CDS | 40.0% | |
| ! | GTTGTCCTTTGGGAAGAAAT+AGG | - | Chr1:59137062-59137081 | MsG0180003252.01.T01:CDS | 40.0% |
| !! | GAAGGTATTGAAGAAGCTCT+TGG | - | Chr1:59136755-59136774 | MsG0180003252.01.T01:CDS | 40.0% |
| !! | TTAAGGCTCATTCTGAGGTT+TGG | - | Chr1:59137443-59137462 | MsG0180003252.01.T01:CDS | 40.0% |
| !!! | GCGATTCAATCGTTTTAGAG+AGG | - | Chr1:59136942-59136961 | MsG0180003252.01.T01:CDS | 40.0% |
| GGTTACTGTGAAATCGCATG+CGG | - | Chr1:59136889-59136908 | MsG0180003252.01.T01:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 59136635 | 59137510 | 59136635 | ID=MsG0180003252.01;Name=MsG0180003252.01 |
| Chr1 | mRNA | 59136635 | 59137510 | 59136635 | ID=MsG0180003252.01.T01;Parent=MsG0180003252.01;Name=MsG0180003252.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|291 |
| Chr1 | exon | 59136635 | 59137510 | 59136635 | ID=MsG0180003252.01.T01:exon:35026;Parent=MsG0180003252.01.T01 |
| Chr1 | CDS | 59136635 | 59137510 | 59136635 | ID=MsG0180003252.01.T01:cds;Parent=MsG0180003252.01.T01 |
| Gene Sequence |
| Protein sequence |
