AlfalfaGEDB | MsG0180004655.01

M. sativa cultivar ZhongmuNo.1 / MsG0180004655.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004655.01.T01	XP_003591215.1	100	182	0	0	1	182	1	182	1.74E-126	366

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004655.01.T01	G7I9H5	100.000	182	0	0	1	182	1	182	8.31e-127	366

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000195.01	MsG0180004655.01	0.801874	7.329648e-49	3.539341e-46
MsG0180000235.01	MsG0180004655.01	0.801395	9.188548e-49	4.383220e-46
MsG0180000555.01	MsG0180004655.01	0.802845	4.624761e-49	2.289140e-46
MsG0180000741.01	MsG0180004655.01	0.810372	1.190864e-50	7.165785e-48
MsG0180001173.01	MsG0180004655.01	0.804255	2.358135e-49	1.210106e-46
MsG0180001662.01	MsG0180004655.01	0.818315	2.090534e-52	1.559501e-49
MsG0180003031.01	MsG0180004655.01	0.821095	4.843138e-53	3.902974e-50
MsG0180003807.01	MsG0180004655.01	0.806228	9.110444e-50	4.918646e-47
MsG0180003977.01	MsG0180004655.01	0.810780	9.720498e-51	5.913301e-48
MsG0180004372.01	MsG0180004655.01	0.811893	5.575683e-51	3.492978e-48
MsG0180004655.01	MsG0180005443.01	0.809602	1.745115e-50	1.029138e-47
MsG0180004655.01	MsG0180005451.01	0.814069	1.858741e-51	1.234813e-48
MsG0180004655.01	MsG0180005944.01	0.823337	1.462280e-53	1.255423e-50
MsG0180004655.01	MsG0180006098.01	0.808137	3.590448e-50	2.036749e-47
MsG0180004655.01	MsG0180006128.01	0.823992	1.027311e-53	8.984529e-51
MsG0180004655.01	MsG0280007529.01	0.807047	6.116728e-50	3.372426e-47
MsG0180004655.01	MsG0280007564.01	0.814932	1.197772e-51	8.144258e-49
MsG0180004655.01	MsG0280007710.01	0.818357	2.044372e-52	1.526971e-49
MsG0180004655.01	MsG0280009748.01	0.819283	1.259783e-52	9.652101e-50
MsG0180004655.01	MsG0280010109.01	0.819340	1.222878e-52	9.383637e-50
MsG0180004655.01	MsG0280010447.01	0.832443	9.425396e-56	1.053656e-52
MsG0180004655.01	MsG0280010448.01	0.808123	3.614414e-50	2.049606e-47
MsG0180004655.01	MsG0280010560.01	0.800385	1.477555e-48	6.870734e-46
MsG0180004655.01	MsG0280011293.01	0.807365	5.238539e-50	2.912188e-47
MsG0180004655.01	MsG0380012460.01	0.812576	3.954183e-51	2.523329e-48
MsG0180004655.01	MsG0380014880.01	0.814224	1.718034e-51	1.146079e-48
MsG0180004655.01	MsG0380015713.01	0.807205	5.663792e-50	3.135580e-47
MsG0180004655.01	MsG0380016397.01	0.804125	2.509398e-49	1.283505e-46
MsG0180004655.01	MsG0380016561.01	0.809239	2.087717e-50	1.219330e-47
MsG0180004655.01	MsG0380016859.01	0.815501	8.951391e-52	6.182517e-49
MsG0180004655.01	MsG0380016905.01	0.836750	7.790584e-57	9.910820e-54
MsG0180004655.01	MsG0380016971.01	0.828218	1.016054e-54	1.003471e-51
MsG0180004655.01	MsG0380017375.01	0.814047	1.879112e-51	1.247558e-48
MsG0180004655.01	MsG0480018640.01	0.826381	2.798414e-54	2.620259e-51
MsG0180004655.01	MsG0480019970.01	0.830226	3.307920e-55	3.464075e-52
MsG0180004655.01	MsG0480020540.01	0.824196	9.200351e-54	8.093158e-51
MsG0180004655.01	MsG0480021772.01	0.819063	1.414059e-52	1.076896e-49
MsG0180004655.01	MsG0480023412.01	0.814982	1.167343e-51	7.948526e-49
MsG0180004655.01	MsG0480023554.01	0.801671	8.066907e-49	3.875109e-46
MsG0180004655.01	MsG0480023600.01	0.810382	1.184916e-50	7.131662e-48
MsG0180004655.01	MsG0480023873.01	0.840432	8.727502e-58	1.242908e-54
MsG0180004655.01	MsG0580024353.01	0.805159	1.526808e-49	8.020052e-47
MsG0180004655.01	MsG0580024618.01	0.813752	2.183690e-51	1.438174e-48
MsG0180004655.01	MsG0580024733.01	0.807181	5.730280e-50	3.170416e-47
MsG0180004655.01	MsG0580024781.01	0.806871	6.664007e-50	3.657511e-47
MsG0180004655.01	MsG0580025184.01	0.822114	2.816130e-53	2.335344e-50
MsG0180004655.01	MsG0580029189.01	0.802237	6.170589e-49	3.007226e-46
MsG0180004655.01	MsG0580029478.01	0.809161	2.169738e-50	1.264553e-47
MsG0180004655.01	MsG0580029629.01	0.806983	6.310016e-50	3.473254e-47
MsG0180004655.01	MsG0580029762.01	0.842626	2.305490e-58	3.515884e-55
MsG0180004655.01	MsG0580029926.01	0.801698	7.965501e-49	3.828935e-46
MsG0180004655.01	MsG0680032075.01	0.806625	7.510858e-50	4.095982e-47
MsG0180004655.01	MsG0680034757.01	0.810438	1.152723e-50	6.948098e-48
MsG0180004655.01	MsG0780036609.01	0.803172	3.957258e-49	1.975098e-46
MsG0180004655.01	MsG0780036663.01	0.800042	1.734766e-48	7.996697e-46
MsG0180004655.01	MsG0780039717.01	0.810187	1.305558e-50	7.817596e-48
MsG0180004655.01	MsG0780039777.01	0.810634	1.045363e-50	6.334397e-48
MsG0180004655.01	MsG0780039845.01	0.805098	1.572895e-49	8.248947e-47
MsG0180004655.01	MsG0780040044.01	0.810356	1.200592e-50	7.221210e-48
MsG0180004655.01	MsG0780040176.01	0.800505	1.396912e-48	6.515193e-46
MsG0180004655.01	MsG0780040712.01	0.801513	8.689395e-49	4.157598e-46
MsG0180004655.01	MsG0780041033.01	0.825463	4.623526e-54	4.217001e-51
MsG0180004655.01	MsG0780041469.01	0.802537	5.351834e-49	2.628215e-46
MsG0180004655.01	MsG0880043522.01	0.805794	1.123763e-49	6.000110e-47
MsG0180004655.01	MsG0880044917.01	0.804695	1.909543e-49	9.911243e-47
MsG0180004655.01	MsG0880045393.01	0.809008	2.339088e-50	1.357628e-47
MsG0180004655.01	MsG0880045869.01	0.800052	1.726605e-48	7.961116e-46
MsG0180004655.01	MsG0880046027.01	0.820371	7.105301e-53	5.611800e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004655.01.T01	MTR_1g084000	100.000	182	0	0	1	182	1	182	2.11e-130	366
MsG0180004655.01.T01	MTR_4g102360	41.121	107	63	0	6	112	13	119	5.81e-20	85.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004655.01.T01	AT1G56420	70.056	177	36	4	1	173	1	164	9.52e-76	227
MsG0180004655.01.T01	AT1G12530	38.393	112	69	0	1	112	2	113	4.70e-19	82.0

Find 82 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTTATTTCCACTTCTAAA+TGG	0.197156	1:+80839551	MsG0180004655.01.T01:CDS
AAGCTTCAGTGAAACAAATT+TGG	0.204215	1:+80839676	MsG0180004655.01.T01:CDS
TCTGCTGTCGGCCTCCTTAT+CGG	0.250465	1:-80839585	None:intergenic
AGGCAAAATATGGAAGAATT+TGG	0.277793	1:-80835425	None:intergenic
GGATATGAAAACGCAATAAT+TGG	0.282027	1:-80835367	None:intergenic
ACAATCTTTGGTTTGCTTCA+TGG	0.285059	1:+80840231	MsG0180004655.01.T01:three_prime_UTR
ATTGCATTGATGACAATCTT+TGG	0.297658	1:+80840219	MsG0180004655.01.T01:three_prime_UTR
TTTCGCGAGAAGGCAAAATA+TGG	0.308901	1:-80835435	None:intergenic
TTTGAACATAATTATTGTTT+GGG	0.314079	1:+80840085	MsG0180004655.01.T01:three_prime_UTR
AGAAAGCATCAAAATCAGTT+TGG	0.321915	1:+80839441	MsG0180004655.01.T01:CDS
CGCATCAAATAGCTCTCTTT+TGG	0.330709	1:-80836237	None:intergenic
GAAAGCATCAAAATCAGTTT+GGG	0.368981	1:+80839442	MsG0180004655.01.T01:CDS
CTGCTGTCGGCCTCCTTATC+GGG	0.370227	1:-80839584	None:intergenic
CAAGTCTTTGAAATTGATAA+AGG	0.372042	1:-80839787	None:intergenic
ACGGTGACTGCTATTGCTTA+TGG	0.375941	1:+80835472	MsG0180004655.01.T01:exon
ACGGCACAATTGATGCTCTT+AGG	0.378868	1:+80835546	MsG0180004655.01.T01:CDS
TTGGTCTGTTTCTCAGCACC+AGG	0.378931	1:-80836218	None:intergenic
ATTGCTTATGGCTTCTTCTT+CGG	0.385395	1:+80835484	MsG0180004655.01.T01:exon
CCATTTAGAAGTGGAAATAA+AGG	0.396205	1:-80839551	None:intergenic
GCCGACAGCAGAAAAGAAAA+AGG	0.398061	1:+80839596	MsG0180004655.01.T01:CDS
CAGCGACTCTAATACATCTT+CGG	0.400938	1:-80835516	None:intergenic
GGCATAATACACAGCTTTGA+TGG	0.416631	1:-80839911	None:intergenic
GCAGCAATATCAGAAGGTTC+TGG	0.447110	1:+80839757	MsG0180004655.01.T01:CDS
GTGGAAATAAAGGAGGTTCC+TGG	0.453242	1:-80839541	None:intergenic
GAGTTCAACAAGTTTCTGTA+AGG	0.458707	1:+80839816	MsG0180004655.01.T01:CDS
GAGGTTCCTGGCCACTCAAT+CGG	0.460623	1:-80839529	None:intergenic
AGCGACTCTAATACATCTTC+GGG	0.462062	1:-80835515	None:intergenic
ATAATTGGAGGTCGTATTGA+TGG	0.462824	1:-80835352	None:intergenic
CTGATATTGCTGCAGGATCA+AGG	0.463386	1:-80839747	None:intergenic
CTGTGACTTACTCAAGCTCT+TGG	0.467413	1:-80836265	None:intergenic
GTAAGGGAAGTGATCACATC+TGG	0.474897	1:+80839833	MsG0180004655.01.T01:CDS
TCGGCCTCCTTATCGGGTTG+TGG	0.478473	1:-80839578	None:intergenic
AAAGATGGCTGAACAGAGTA+AGG	0.482291	1:+80836184	MsG0180004655.01.T01:CDS
CAATGTCATGGTTCATGCTA+GGG	0.482802	1:+80840043	MsG0180004655.01.T01:three_prime_UTR
CAGGATCAAGGACCTGGTGG+CGG	0.489944	1:-80839735	None:intergenic
GACTATTCGATTTCGCGAGA+AGG	0.496360	1:-80835445	None:intergenic
TGGAGAACCACAACCCGATA+AGG	0.500687	1:+80839571	MsG0180004655.01.T01:CDS
AGATCTATCAAACACACATC+TGG	0.501769	1:-80835235	None:intergenic
TCAATTTCAAAGACTTGACC+AGG	0.505935	1:+80839793	MsG0180004655.01.T01:CDS
TAATACACAGCTTTGATGGC+TGG	0.513965	1:-80839907	None:intergenic
TCAATGTCATGGTTCATGCT+AGG	0.517405	1:+80840042	MsG0180004655.01.T01:three_prime_UTR
TGGATATTGATTTGTATCGA+TGG	0.517555	1:-80835405	None:intergenic
AAACTCTTATATTATATGAA+AGG	0.517914	1:-80839950	None:intergenic
TGGGTGCCGTGTTAGTTTCG+AGG	0.518042	1:-80835332	None:intergenic
GAACCTTCTGATATTGCTGC+AGG	0.521199	1:-80839754	None:intergenic
CGATGGATATAGACCAATGT+TGG	0.523008	1:-80835388	None:intergenic
CAAGAGTACTACAATAAAGA+TGG	0.523311	1:+80836169	MsG0180004655.01.T01:CDS
TCATTGAATTTGCGAAGGCT+AGG	0.523598	1:+80840000	MsG0180004655.01.T01:three_prime_UTR
CAGAAACTTGTTGAACTCCC+TGG	0.528464	1:-80839811	None:intergenic
AGGATCAAGGACCTGGTGGC+GGG	0.528495	1:-80839734	None:intergenic
TGGTCTGTTTCTCAGCACCA+GGG	0.531608	1:-80836217	None:intergenic
GGTCTTCTGATCCCGCCACC+AGG	0.538253	1:+80839723	MsG0180004655.01.T01:CDS
AGACAACAATGGCCTGGGAA+AGG	0.538377	1:+80839475	MsG0180004655.01.T01:CDS
TGATGAGGGAAGGAGGAAGG+AGG	0.538633	1:-80835280	None:intergenic
TATGAAAACGCAATAATTGG+AGG	0.553735	1:-80835364	None:intergenic
TATTATATGAAAGGCATACA+AGG	0.558754	1:-80839941	None:intergenic
TTGGGAAAATTCTAGAGTGT+AGG	0.570862	1:+80840103	MsG0180004655.01.T01:three_prime_UTR
TAATTGGAGGTCGTATTGAT+GGG	0.571726	1:-80835351	None:intergenic
CAATTTCCTCGAAACTAACA+CGG	0.576374	1:+80835326	MsG0180004655.01.T01:five_prime_UTR
TCTCACTTATCTCCTTTCCC+AGG	0.576762	1:-80839487	None:intergenic
GGAAAATTCTAGAGTGTAGG+TGG	0.576870	1:+80840106	MsG0180004655.01.T01:three_prime_UTR
TGTGGTTCTCCATTTAGAAG+TGG	0.580837	1:-80839560	None:intergenic
AGTTCAACAAGTTTCTGTAA+GGG	0.581346	1:+80839817	MsG0180004655.01.T01:CDS
TTCAGTGAAACAAATTTGGA+CGG	0.583723	1:+80839680	MsG0180004655.01.T01:CDS
TTTAGAAGTGGAAATAAAGG+AGG	0.594824	1:-80839548	None:intergenic
TTTCATCATTGAATTTGCGA+AGG	0.596558	1:+80839995	MsG0180004655.01.T01:three_prime_UTR
GGATTATGAACTCAATGTCA+TGG	0.600830	1:+80840031	MsG0180004655.01.T01:three_prime_UTR
TTGCTGCAGGATCAAGGACC+TGG	0.602702	1:-80839741	None:intergenic
AGTAAGGTTCTGAACACCCC+TGG	0.607738	1:+80836200	MsG0180004655.01.T01:CDS
GTGCAGATGAAACTGCCACC+AGG	0.614656	1:+80839702	MsG0180004655.01.T01:CDS
GGTCTGTTTCTCAGCACCAG+GGG	0.615244	1:-80836216	None:intergenic
AAAGGCATACAAGGTGTCTG+AGG	0.617913	1:-80839932	None:intergenic
GGTGGCGGGATCAGAAGACC+TGG	0.619059	1:-80839720	None:intergenic
AATGTCATGGTTCATGCTAG+GGG	0.637434	1:+80840044	MsG0180004655.01.T01:three_prime_UTR
GATCCTGCAGCAATATCAGA+AGG	0.642543	1:+80839751	MsG0180004655.01.T01:CDS
CGAAATCGAATAGTCTTCGA+CGG	0.642676	1:+80835453	MsG0180004655.01.T01:five_prime_UTR
TGCGAAGGCTAGGAGATGTG+AGG	0.646138	1:+80840010	MsG0180004655.01.T01:three_prime_UTR
AGAACCACAACCCGATAAGG+AGG	0.663173	1:+80839574	MsG0180004655.01.T01:CDS
CAATTTCAAAGACTTGACCA+GGG	0.668086	1:+80839794	MsG0180004655.01.T01:CDS
GGCGGGATCAGAAGACCTGG+TGG	0.679171	1:-80839717	None:intergenic
CTGCAGGATCAAGGACCTGG+TGG	0.711548	1:-80839738	None:intergenic
TTAGAGTCGCTGATGAACGA+CGG	0.717153	1:+80835527	MsG0180004655.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATTCAAAATAAAAGAA+AGG	-	Chr1:80838511-80838530	None:intergenic	10.0%
!!	AAAATTCAAAATAAAAGAAA+GGG	-	Chr1:80838510-80838529	None:intergenic	10.0%
!!!	ATTTTATACATGTATTATTA+GGG	-	Chr1:80837324-80837343	None:intergenic	10.0%
!!!	TGATTTTTGTATATTATAAT+AGG	+	Chr1:80835653-80835672	MsG0180004655.01.T01:intron	10.0%
!!	AAACTCTTATATTATATGAA+AGG	-	Chr1:80839953-80839972	None:intergenic	15.0%
!!	AAATTCAAAATAAAAGAAAG+GGG	-	Chr1:80838509-80838528	None:intergenic	15.0%
!!	AAGTCAAATTAACATTATAA+CGG	-	Chr1:80835915-80835934	None:intergenic	15.0%
!!	CGAATGAATTATAATAAAAT+AGG	+	Chr1:80839050-80839069	MsG0180004655.01.T01:intron	15.0%
!!	GAAAAATAAAATTGGAAAAA+AGG	-	Chr1:80835616-80835635	None:intergenic	15.0%
!!	TAAAATAGTAAAAGTTAGAT+TGG	-	Chr1:80838228-80838247	None:intergenic	15.0%
!!	TAGAACTAGAAAAATAAAAT+TGG	-	Chr1:80835624-80835643	None:intergenic	15.0%
!!	TTTGAACATAATTATTGTTT+GGG	+	Chr1:80840085-80840104	MsG0180004655.01.T01:three_prime_UTR	15.0%
!!!	AAATATATTGTTGAACTTTT+AGG	+	Chr1:80839857-80839876	MsG0180004655.01.T01:CDS	15.0%
!!!	AATTAAATGTCAATTTTTGT+AGG	+	Chr1:80838772-80838791	MsG0180004655.01.T01:intron	15.0%
!!!	AATTTGACTTTATATTAAGA+GGG	+	Chr1:80835925-80835944	MsG0180004655.01.T01:intron	15.0%
!!!	ACCAAATACAAATATTATTT+TGG	-	Chr1:80837287-80837306	None:intergenic	15.0%
!!!	ATTAAATGTCAATTTTTGTA+GGG	+	Chr1:80838773-80838792	MsG0180004655.01.T01:intron	15.0%
!!!	ATTTTGAATTTTGGTATAAT+TGG	+	Chr1:80836074-80836093	MsG0180004655.01.T01:intron	15.0%
!!!	GATAAATAATTTACACATTT+TGG	-	Chr1:80836866-80836885	None:intergenic	15.0%
!!!	GATTTGCTTATATTTATTTT+TGG	+	Chr1:80836287-80836306	MsG0180004655.01.T01:intron	15.0%
!!!	GATTTTATACATGTATTATT+AGG	-	Chr1:80837325-80837344	None:intergenic	15.0%
!!!	TAATTTGACTTTATATTAAG+AGG	+	Chr1:80835924-80835943	MsG0180004655.01.T01:intron	15.0%
!!!	TTTTGAACATAATTATTGTT+TGG	+	Chr1:80840084-80840103	MsG0180004655.01.T01:three_prime_UTR	15.0%
!!	AAAAAATTTGAATGAAAGAG+AGG	+	Chr1:80836927-80836946	MsG0180004655.01.T01:intron	20.0%
!!	AAAAATTTGAATGAAAGAGA+GGG	+	Chr1:80836928-80836947	MsG0180004655.01.T01:intron	20.0%
!!	AAAGACAAACTAAAATCAAT+AGG	-	Chr1:80837162-80837181	None:intergenic	20.0%
!!	AAATAAAATTGGAAAAAAGG+AGG	-	Chr1:80835613-80835632	None:intergenic	20.0%
!!	AAATAATTATAACCACTTGA+TGG	-	Chr1:80836902-80836921	None:intergenic	20.0%
!!	AATAAAATTGGAAAAAAGGA+GGG	-	Chr1:80835612-80835631	None:intergenic	20.0%
!!	ACAATAACACTATAATTGTA+GGG	+	Chr1:80835871-80835890	MsG0180004655.01.T01:intron	20.0%
!!	AGCTGTATAAAAGTTAAAAT+TGG	-	Chr1:80838154-80838173	None:intergenic	20.0%
!!	ATACCAAAATTCAAAATCAA+TGG	-	Chr1:80836071-80836090	None:intergenic	20.0%
!!	CAAATTCAATGATGAAAAAT+TGG	-	Chr1:80839992-80840011	None:intergenic	20.0%
!!	GCCAAAATAATATTTGTATT+TGG	+	Chr1:80837283-80837302	MsG0180004655.01.T01:intron	20.0%
!!	GCTGTATAAAAGTTAAAATT+GGG	-	Chr1:80838153-80838172	None:intergenic	20.0%
!!	TAAAACTATTTCATACAAAG+AGG	-	Chr1:80838561-80838580	None:intergenic	20.0%
!!	TCTTTATTATAGACTGAAAT+AGG	+	Chr1:80838874-80838893	MsG0180004655.01.T01:intron	20.0%
!!	TTCATCTATATTTCATATGA+GGG	-	Chr1:80836543-80836562	None:intergenic	20.0%
!!	TTGTAGATTCAAAAAATTGT+TGG	+	Chr1:80835742-80835761	MsG0180004655.01.T01:intron	20.0%
!!	TTTCATCTATATTTCATATG+AGG	-	Chr1:80836544-80836563	None:intergenic	20.0%
!!!	AAAAATGCTTTTTTTACATG+TGG	-	Chr1:80835807-80835826	None:intergenic	20.0%
!!!	ATTTGACTTTATATTAAGAG+GGG	+	Chr1:80835926-80835945	MsG0180004655.01.T01:intron	20.0%
!!!	CCAAATTTTTAAGAAAATCT+TGG	+	Chr1:80838837-80838856	MsG0180004655.01.T01:intron	20.0%
!!!	CCAAGATTTTCTTAAAAATT+TGG	-	Chr1:80838840-80838859	None:intergenic	20.0%
!!!	GATTTAATTTTAGACAACAA+TGG	+	Chr1:80839464-80839483	MsG0180004655.01.T01:CDS	20.0%
!!!	TCAAATTATTTAGTTTTTGC+TGG	+	Chr1:80839356-80839375	MsG0180004655.01.T01:intron	20.0%
!!!	TTAAAGAGACATCAATTTTA+AGG	-	Chr1:80840200-80840219	None:intergenic	20.0%
!!!	TTTTTGCAGACTTAATAAAA+GGG	-	Chr1:80837418-80837437	None:intergenic	20.0%
!!!	TTTTTTGCAGACTTAATAAA+AGG	-	Chr1:80837419-80837438	None:intergenic	20.0%
!!!	TTTTTTGCATTTTCATTGTA+CGG	-	Chr1:80837590-80837609	None:intergenic	20.0%
!	AAAAAACGTTATAATTGCAC+AGG	-	Chr1:80835697-80835716	None:intergenic	25.0%
!	AAACAAAAAAGTCTCATACT+TGG	+	Chr1:80836748-80836767	MsG0180004655.01.T01:intron	25.0%
!	AACAAAAAAGTCTCATACTT+GGG	+	Chr1:80836749-80836768	MsG0180004655.01.T01:intron	25.0%
!	ACCAAAATAAGCATACTTAT+TGG	-	Chr1:80838045-80838064	None:intergenic	25.0%
!	AGGCATTAACAAAAAAAAAG+TGG	-	Chr1:80839236-80839255	None:intergenic	25.0%
!	ATAAATATACACAACTGATG+CGG	+	Chr1:80837541-80837560	MsG0180004655.01.T01:intron	25.0%
!	ATGAAAATATTATTGATGGG+AGG	-	Chr1:80837220-80837239	None:intergenic	25.0%
!	CAATATATTCCTGACATTAA+CGG	+	Chr1:80837564-80837583	MsG0180004655.01.T01:intron	25.0%
!	CACAATAACACTATAATTGT+AGG	+	Chr1:80835870-80835889	MsG0180004655.01.T01:intron	25.0%
!	CTTGTATATACACTTCTTAA+AGG	+	Chr1:80838452-80838471	MsG0180004655.01.T01:intron	25.0%
!	GAAAACATTTGTAATGTGAA+TGG	+	Chr1:80837504-80837523	MsG0180004655.01.T01:intron	25.0%
!	GACTGGAAAATAGATTAATT+AGG	-	Chr1:80838633-80838652	None:intergenic	25.0%
!	GGGATGAAAATATTATTGAT+GGG	-	Chr1:80837223-80837242	None:intergenic	25.0%
!	TTTCATACAAAGAGGTTTAA+TGG	-	Chr1:80838553-80838572	None:intergenic	25.0%
!!	AACATATTTTGCACATGAAT+TGG	+	Chr1:80837463-80837482	MsG0180004655.01.T01:intron	25.0%
!!	AATATTTGTATTTGGTTCCT+TGG	+	Chr1:80837291-80837310	MsG0180004655.01.T01:intron	25.0%
!!	ACATTACAAATGTTTTCGTT+GGG	-	Chr1:80837501-80837520	None:intergenic	25.0%
!!	ATTTTCAGCAAGATGATTAA+GGG	-	Chr1:80837244-80837263	None:intergenic	25.0%
!!	CACATTACAAATGTTTTCAT+TGG	-	Chr1:80837674-80837693	None:intergenic	25.0%
!!	CTTTAAGAAGTGTATATACA+AGG	-	Chr1:80838454-80838473	None:intergenic	25.0%
!!	TATTATATGAAAGGCATACA+AGG	-	Chr1:80839944-80839963	None:intergenic	25.0%
!!	TCCAATAAGTATGCTTATTT+TGG	+	Chr1:80838041-80838060	MsG0180004655.01.T01:intron	25.0%
!!	TCTTGGTAATTATACAGATA+CGG	+	Chr1:80838990-80839009	MsG0180004655.01.T01:intron	25.0%
!!	TTTTGTTCAGATTCACAAAT+TGG	-	Chr1:80835840-80835859	None:intergenic	25.0%
!!!	AAAACCCTAATTTTTTGATG+AGG	-	Chr1:80835298-80835317	None:intergenic	25.0%
!!!	AAACCCTAATTTTTTGATGA+GGG	-	Chr1:80835297-80835316	None:intergenic	25.0%
!!!	ACTATTACTTTTCCGTTTTT+TGG	-	Chr1:80837975-80837994	None:intergenic	25.0%
!!!	AGACTTTTTTGTTTTAGTGA+AGG	-	Chr1:80836742-80836761	None:intergenic	25.0%
!!!	AGTTCACACTACTTTTATAT+GGG	-	Chr1:80836795-80836814	None:intergenic	25.0%
!!!	CAAGTCTTTGAAATTGATAA+AGG	-	Chr1:80839790-80839809	None:intergenic	25.0%
!!!	CTTCCATTGATTTTGAATTT+TGG	+	Chr1:80836065-80836084	MsG0180004655.01.T01:intron	25.0%
!!!	CTTGTTTTTTTGTAATCACA+TGG	-	Chr1:80839180-80839199	None:intergenic	25.0%
!!!	TTGTGCTGTTTTATTTTTGT+AGG	+	Chr1:80836139-80836158	MsG0180004655.01.T01:intron	25.0%
	AAGCTTCAGTGAAACAAATT+TGG	+	Chr1:80839676-80839695	MsG0180004655.01.T01:CDS	30.0%
	AATCACAACTTTCTAACTTG+AGG	+	Chr1:80836586-80836605	MsG0180004655.01.T01:intron	30.0%
	ACTTTATATTAAGAGGGGTT+TGG	+	Chr1:80835931-80835950	MsG0180004655.01.T01:intron	30.0%
	AGCAGAAAAGAAAAAGGTAA+AGG	+	Chr1:80839602-80839621	MsG0180004655.01.T01:CDS	30.0%
	AGGCAAAATATGGAAGAATT+TGG	-	Chr1:80835428-80835447	None:intergenic	30.0%
	AGTTCAACAAGTTTCTGTAA+GGG	+	Chr1:80839817-80839836	MsG0180004655.01.T01:CDS	30.0%
	ATAGGCGCTCAATATTATTA+GGG	-	Chr1:80837394-80837413	None:intergenic	30.0%
	ATTGACAAGTGTATCAGTAT+TGG	-	Chr1:80838016-80838035	None:intergenic	30.0%
	ATTTCATATGAGGGATTGAA+TGG	-	Chr1:80836534-80836553	None:intergenic	30.0%
	CAAATCAAATCCTGTGAAAT+AGG	+	Chr1:80838601-80838620	MsG0180004655.01.T01:intron	30.0%
	CATAGAGAACATTTCTACTA+CGG	-	Chr1:80836994-80837013	None:intergenic	30.0%
	CCACATGCAAAACTAATATA+AGG	-	Chr1:80838920-80838939	None:intergenic	30.0%
	CCATTTAGAAGTGGAAATAA+AGG	-	Chr1:80839554-80839573	None:intergenic	30.0%
	CTTATACTACTATACTAGAC+AGG	+	Chr1:80839128-80839147	MsG0180004655.01.T01:intron	30.0%
	CTTCCCTCATCAAAAAATTA+GGG	+	Chr1:80835291-80835310	MsG0180004655.01.T01:five_prime_UTR	30.0%
	GGATATGAAAACGCAATAAT+TGG	-	Chr1:80835370-80835389	None:intergenic	30.0%
	GGGGATGAAAATATTATTGA+TGG	-	Chr1:80837224-80837243	None:intergenic	30.0%
	TAGTGAAATTTATGCAAGAG+TGG	-	Chr1:80837796-80837815	None:intergenic	30.0%
	TATGAAAACGCAATAATTGG+AGG	-	Chr1:80835367-80835386	None:intergenic	30.0%
	TCATGATGATAGCAATAACT+TGG	-	Chr1:80838705-80838724	None:intergenic	30.0%
	TGTGAAGCTAAAATCTAATC+AGG	-	Chr1:80839332-80839351	None:intergenic	30.0%
	TTAGACTAATCTCAAGTACA+CGG	-	Chr1:80836568-80836587	None:intergenic	30.0%
	TTCAGTGAAACAAATTTGGA+CGG	+	Chr1:80839680-80839699	MsG0180004655.01.T01:CDS	30.0%
	TTCATGTGCAAAATATGTTG+CGG	-	Chr1:80837462-80837481	None:intergenic	30.0%
	TTTAGAAGTGGAAATAAAGG+AGG	-	Chr1:80839551-80839570	None:intergenic	30.0%
	TTTCATCATTGAATTTGCGA+AGG	+	Chr1:80839995-80840014	MsG0180004655.01.T01:three_prime_UTR	30.0%
!	ACATGTGTCGTGATTTTATT+GGG	-	Chr1:80835784-80835803	None:intergenic	30.0%
!	AGTCTTACTGCATGTATTTT+GGG	+	Chr1:80839098-80839117	MsG0180004655.01.T01:intron	30.0%
!	ATTGCATTGATGACAATCTT+TGG	+	Chr1:80840219-80840238	MsG0180004655.01.T01:three_prime_UTR	30.0%
!	CACATTACAAATGTTTTCGT+TGG	-	Chr1:80837502-80837521	None:intergenic	30.0%
!	CATTACAAATGTTTTCGTTG+GGG	-	Chr1:80837500-80837519	None:intergenic	30.0%
!	CCTTTATTTCCACTTCTAAA+TGG	+	Chr1:80839551-80839570	MsG0180004655.01.T01:CDS	30.0%
!	GATTTTCAGCAAGATGATTA+AGG	-	Chr1:80837245-80837264	None:intergenic	30.0%
!	GTATTGGATTGGATACATAT+CGG	-	Chr1:80838000-80838019	None:intergenic	30.0%
!	TTCACTCTATTTTCCATTTG+CGG	+	Chr1:80838375-80838394	MsG0180004655.01.T01:intron	30.0%
!	TTTTCAACCCAATAATCTGA+GGG	-	Chr1:80837901-80837920	None:intergenic	30.0%
!	TTTTCAGCAAGATGATTAAG+GGG	-	Chr1:80837243-80837262	None:intergenic	30.0%
!!	AGAAAGCATCAAAATCAGTT+TGG	+	Chr1:80839441-80839460	MsG0180004655.01.T01:CDS	30.0%
!!	AGCTTTATTTAAGACGTATC+AGG	-	Chr1:80838073-80838092	None:intergenic	30.0%
!!	CAACTTTTCAAGCATTCTTT+AGG	-	Chr1:80838482-80838501	None:intergenic	30.0%
!!	CAAGAGTACTACAATAAAGA+TGG	+	Chr1:80836169-80836188	MsG0180004655.01.T01:CDS	30.0%
!!	CAGTTCACACTACTTTTATA+TGG	-	Chr1:80836796-80836815	None:intergenic	30.0%
!!	GAAAGCATCAAAATCAGTTT+GGG	+	Chr1:80839442-80839461	MsG0180004655.01.T01:CDS	30.0%
!!	GCTTTATTTAAGACGTATCA+GGG	-	Chr1:80838072-80838091	None:intergenic	30.0%
!!	GTTCACACTACTTTTATATG+GGG	-	Chr1:80836794-80836813	None:intergenic	30.0%
!!	TAGTCTTACTGCATGTATTT+TGG	+	Chr1:80839097-80839116	MsG0180004655.01.T01:intron	30.0%
!!	TGGATATTGATTTGTATCGA+TGG	-	Chr1:80835408-80835427	None:intergenic	30.0%
!!!	CCTTATATTAGTTTTGCATG+TGG	+	Chr1:80838917-80838936	MsG0180004655.01.T01:intron	30.0%
!!!	CTGAAGCTTCTTTTTTTTGA+TGG	-	Chr1:80839665-80839684	None:intergenic	30.0%
!!!	TGCTGTTTTATTTTTGTAGG+AGG	+	Chr1:80836142-80836161	MsG0180004655.01.T01:intron	30.0%
!!!	TTTAGTTTTTGCTGGAATTC+TGG	+	Chr1:80839364-80839383	MsG0180004655.01.T01:intron	30.0%
	AAAAGTCTCATACTTGGGTT+TGG	+	Chr1:80836754-80836773	MsG0180004655.01.T01:intron	35.0%
	AAAATTGGGTGTGTCGTATT+CGG	-	Chr1:80838139-80838158	None:intergenic	35.0%
	AAACGTACGCAAAATATAGG+TGG	-	Chr1:80836718-80836737	None:intergenic	35.0%
	AAGGAACCGTACAATACAAA+AGG	-	Chr1:80837362-80837381	None:intergenic	35.0%
	AAGTTGAGAGGGTAAAAGTA+AGG	-	Chr1:80838257-80838276	None:intergenic	35.0%
	AATTACAACTGTTCGTAGCA+TGG	-	Chr1:80836693-80836712	None:intergenic	35.0%
	ACAGGTCTGAATTGTTAGTT+TGG	+	Chr1:80839146-80839165	MsG0180004655.01.T01:intron	35.0%
	ACATGCAGTAAGACTAAACA+GGG	-	Chr1:80839093-80839112	None:intergenic	35.0%
	AGATCTATCAAACACACATC+TGG	-	Chr1:80835238-80835257	None:intergenic	35.0%
	ATAATTGGAGGTCGTATTGA+TGG	-	Chr1:80835355-80835374	None:intergenic	35.0%
	ATGATATACTCTATTTCGCG+CGG	+	Chr1:80836393-80836412	MsG0180004655.01.T01:intron	35.0%
	ATTACAACTGTTCGTAGCAT+GGG	-	Chr1:80836692-80836711	None:intergenic	35.0%
	ATTATTCCATGCACAAACAC+GGG	+	Chr1:80838742-80838761	MsG0180004655.01.T01:intron	35.0%
	ATTGCTTATGGCTTCTTCTT+CGG	+	Chr1:80835484-80835503	MsG0180004655.01.T01:exon	35.0%
	CAAATGTTGATCCCTTTGTT+GGG	+	Chr1:80836312-80836331	MsG0180004655.01.T01:intron	35.0%
	CAATTTAGCAACCAAAGACA+TGG	+	Chr1:80838099-80838118	MsG0180004655.01.T01:intron	35.0%
	CAATTTCAAAGACTTGACCA+GGG	+	Chr1:80839794-80839813	MsG0180004655.01.T01:CDS	35.0%
	CAATTTCCTCGAAACTAACA+CGG	+	Chr1:80835326-80835345	MsG0180004655.01.T01:five_prime_UTR	35.0%
	CATAGGCGCTCAATATTATT+AGG	-	Chr1:80837395-80837414	None:intergenic	35.0%
	CATTATTCCATGCACAAACA+CGG	+	Chr1:80838741-80838760	MsG0180004655.01.T01:intron	35.0%
	CCAAGAAATCATCTAGTTAG+AGG	-	Chr1:80837055-80837074	None:intergenic	35.0%
	CCTCTAACTAGATGATTTCT+TGG	+	Chr1:80837052-80837071	MsG0180004655.01.T01:intron	35.0%
	CCTTCCCTCATCAAAAAATT+AGG	+	Chr1:80835290-80835309	MsG0180004655.01.T01:five_prime_UTR	35.0%
	CTCTTTCTGTTGACATATCT+AGG	+	Chr1:80838412-80838431	MsG0180004655.01.T01:intron	35.0%
	GAGTTCAACAAGTTTCTGTA+AGG	+	Chr1:80839816-80839835	MsG0180004655.01.T01:CDS	35.0%
	GATCAAGCATGGAAAATTAG+TGG	-	Chr1:80837018-80837037	None:intergenic	35.0%
	GGAAAACGTACGCAAAATAT+AGG	-	Chr1:80836721-80836740	None:intergenic	35.0%
	GGATTATGAACTCAATGTCA+TGG	+	Chr1:80840031-80840050	MsG0180004655.01.T01:three_prime_UTR	35.0%
	GTTCAGATTCACAAATTGGA+AGG	-	Chr1:80835836-80835855	None:intergenic	35.0%
	TACATGCAGTAAGACTAAAC+AGG	-	Chr1:80839094-80839113	None:intergenic	35.0%
	TAGATGATTTCTTGGCTGAT+CGG	+	Chr1:80837060-80837079	MsG0180004655.01.T01:intron	35.0%
	TAGATTGGATGTGTCGTATT+CGG	-	Chr1:80838213-80838232	None:intergenic	35.0%
	TAGGATTTAGCCTATTTCAC+AGG	-	Chr1:80838614-80838633	None:intergenic	35.0%
	TAGTTTAGCAACCAAAGACA+TGG	+	Chr1:80838180-80838199	MsG0180004655.01.T01:intron	35.0%
	TCAATTTCAAAGACTTGACC+AGG	+	Chr1:80839793-80839812	MsG0180004655.01.T01:CDS	35.0%
	TCATGTGCAAAATATGTTGC+GGG	-	Chr1:80837461-80837480	None:intergenic	35.0%
	TCGTACTAGATGCTTTATGT+GGG	+	Chr1:80839269-80839288	MsG0180004655.01.T01:intron	35.0%
	TCTGATTTCCAAATAGATGC+AGG	+	Chr1:80837848-80837867	MsG0180004655.01.T01:intron	35.0%
	TGATGATAGCAATAACTTGG+TGG	-	Chr1:80838702-80838721	None:intergenic	35.0%
	TTCGTACTAGATGCTTTATG+TGG	+	Chr1:80839268-80839287	MsG0180004655.01.T01:intron	35.0%
	TTTGTAATCACATGGCCAAT+GGG	-	Chr1:80839172-80839191	None:intergenic	35.0%
!	AAAATCCGAAGAGTACATGT+GGG	+	Chr1:80837259-80837278	MsG0180004655.01.T01:intron	35.0%
!	AAATGTTTTCATTGGCACAG+TGG	-	Chr1:80837666-80837685	None:intergenic	35.0%
!	AATTTTAGACAACAATGGCC+TGG	+	Chr1:80839469-80839488	MsG0180004655.01.T01:CDS	35.0%
!	ACCTTTTTCTTTTCTGCTGT+CGG	-	Chr1:80839600-80839619	None:intergenic	35.0%
!	ACTTTTTGTGTTCCCAACAA+AGG	-	Chr1:80836327-80836346	None:intergenic	35.0%
!	ATTATTAGGGTACCAATCCA+AGG	-	Chr1:80837311-80837330	None:intergenic	35.0%
!	ATTTTAGACAACAATGGCCT+GGG	+	Chr1:80839470-80839489	MsG0180004655.01.T01:CDS	35.0%
!	CAAGTGTATCAGTATTGGAT+TGG	-	Chr1:80838011-80838030	None:intergenic	35.0%
!	CAGACTTAATAAAAGGGCAT+AGG	-	Chr1:80837412-80837431	None:intergenic	35.0%
!	CTTTTCAACCCAATAATCTG+AGG	-	Chr1:80837902-80837921	None:intergenic	35.0%
!	CTTTTTGTGTTCCCAACAAA+GGG	-	Chr1:80836326-80836345	None:intergenic	35.0%
!	GACATGTGTCGTGATTTTAT+TGG	-	Chr1:80835785-80835804	None:intergenic	35.0%
!	TAATTGGAGGTCGTATTGAT+GGG	-	Chr1:80835354-80835373	None:intergenic	35.0%
!	TACATGTTTTGCACATGGAT+TGG	+	Chr1:80837635-80837654	MsG0180004655.01.T01:intron	35.0%
!	TGCGTTTTCATATCCAACAT+TGG	+	Chr1:80835375-80835394	MsG0180004655.01.T01:five_prime_UTR	35.0%
!	TTGTATTTGGTTCCTTGGAT+TGG	+	Chr1:80837296-80837315	MsG0180004655.01.T01:intron	35.0%
!	TTTTGTAATCACATGGCCAA+TGG	-	Chr1:80839173-80839192	None:intergenic	35.0%
!	TTTTGTATTGTACGGTTCCT+TGG	+	Chr1:80837361-80837380	MsG0180004655.01.T01:intron	35.0%
!!	ATGTCACTTTCTTTGATCGA+GGG	+	Chr1:80838805-80838824	MsG0180004655.01.T01:intron	35.0%
!!	GGTTTAGTTTGGCATTGTAT+AGG	+	Chr1:80836414-80836433	MsG0180004655.01.T01:intron	35.0%
!!	TTGGGAAAATTCTAGAGTGT+AGG	+	Chr1:80840103-80840122	MsG0180004655.01.T01:three_prime_UTR	35.0%
!!!	AATTTTTTGATGAGGGAAGG+AGG	-	Chr1:80835290-80835309	None:intergenic	35.0%
!!!	CCTAATTTTTTGATGAGGGA+AGG	-	Chr1:80835293-80835312	None:intergenic	35.0%
!!!	GTAGTGCGTCTTAGTTTTTT+GGG	+	Chr1:80839012-80839031	MsG0180004655.01.T01:intron	35.0%
	AAAGATGGCTGAACAGAGTA+AGG	+	Chr1:80836184-80836203	MsG0180004655.01.T01:CDS	40.0%
	AAATTGGGTGTGTCGTATTC+GGG	-	Chr1:80838138-80838157	None:intergenic	40.0%
	AAGGAGGGTAGAAACTACAT+TGG	-	Chr1:80835597-80835616	None:intergenic	40.0%
	AATGTCATGGTTCATGCTAG+GGG	+	Chr1:80840044-80840063	MsG0180004655.01.T01:three_prime_UTR	40.0%
	ACAGAAGCTCTGCATGAAAT+AGG	-	Chr1:80839416-80839435	None:intergenic	40.0%
	ACCAAGACAGCCTGTTTATA+GGG	-	Chr1:80838977-80838996	None:intergenic	40.0%
	AGAACCAGGGTTTCAGATAT+TGG	-	Chr1:80837952-80837971	None:intergenic	40.0%
	AGATATACGGGTCGATACTT+TGG	+	Chr1:80838659-80838678	MsG0180004655.01.T01:intron	40.0%
	AGATTGGATGTGTCGTATTC+GGG	-	Chr1:80838212-80838231	None:intergenic	40.0%
	AGCGACTCTAATACATCTTC+GGG	-	Chr1:80835518-80835537	None:intergenic	40.0%
	AGTACGAAATACAGCGGAAT+AGG	-	Chr1:80839256-80839275	None:intergenic	40.0%
	CAAATAGATGCAGGATAGCA+GGG	+	Chr1:80837857-80837876	MsG0180004655.01.T01:intron	40.0%
	CAAATGTAGCATTGTCACTG+TGG	-	Chr1:80836658-80836677	None:intergenic	40.0%
	CAATGTCATGGTTCATGCTA+GGG	+	Chr1:80840043-80840062	MsG0180004655.01.T01:three_prime_UTR	40.0%
	CAGCGACTCTAATACATCTT+CGG	-	Chr1:80835519-80835538	None:intergenic	40.0%
	CCAAATGTTGATCCCTTTGT+TGG	+	Chr1:80836311-80836330	MsG0180004655.01.T01:intron	40.0%
	CCAACAAAGGGATCAACATT+TGG	-	Chr1:80836314-80836333	None:intergenic	40.0%
	CGAAATCGAATAGTCTTCGA+CGG	+	Chr1:80835453-80835472	MsG0180004655.01.T01:five_prime_UTR	40.0%
	CGATGGATATAGACCAATGT+TGG	-	Chr1:80835391-80835410	None:intergenic	40.0%
	CTGTTAAGTGCCCTATAAAC+AGG	+	Chr1:80838964-80838983	MsG0180004655.01.T01:intron	40.0%
	GAAAGTAGAAGCTCCTTGTT+TGG	+	Chr1:80838939-80838958	MsG0180004655.01.T01:intron	40.0%
	GACATATCTAGGCTTCAACT+GGG	+	Chr1:80838423-80838442	MsG0180004655.01.T01:intron	40.0%
	GCACTTAACAGATCCAAACA+AGG	-	Chr1:80838955-80838974	None:intergenic	40.0%
	GCATCTAGTACGAAATACAG+CGG	-	Chr1:80839262-80839281	None:intergenic	40.0%
	GGAATGAGAAGAAGTTGAGA+GGG	-	Chr1:80838268-80838287	None:intergenic	40.0%
	GTTAGAGGAATATGTCATGC+AGG	-	Chr1:80837040-80837059	None:intergenic	40.0%
	TAAAATAGGCGTGCACAGAA+AGG	+	Chr1:80839064-80839083	MsG0180004655.01.T01:intron	40.0%
	TACCAAGACAGCCTGTTTAT+AGG	-	Chr1:80838978-80838997	None:intergenic	40.0%
	TAGATGCTTTATGTGGGTCT+AGG	+	Chr1:80839275-80839294	MsG0180004655.01.T01:intron	40.0%
	TATTGTACGGTTCCTTGGAT+CGG	+	Chr1:80837366-80837385	MsG0180004655.01.T01:intron	40.0%
	TCAATGTCATGGTTCATGCT+AGG	+	Chr1:80840042-80840061	MsG0180004655.01.T01:three_prime_UTR	40.0%
	TCATTGAATTTGCGAAGGCT+AGG	+	Chr1:80840000-80840019	MsG0180004655.01.T01:three_prime_UTR	40.0%
	TCCAGTCCTCCAAAGATATA+CGG	+	Chr1:80838646-80838665	MsG0180004655.01.T01:intron	40.0%
	TGACATATCTAGGCTTCAAC+TGG	+	Chr1:80838422-80838441	MsG0180004655.01.T01:intron	40.0%
	TGCAAAACATGTAGCGAGAT+CGG	-	Chr1:80837628-80837647	None:intergenic	40.0%
	TGCAAGAGTGGATATCAAGT+TGG	-	Chr1:80837784-80837803	None:intergenic	40.0%
	TGGAATGAGAAGAAGTTGAG+AGG	-	Chr1:80838269-80838288	None:intergenic	40.0%
	TGTGGTTCTCCATTTAGAAG+TGG	-	Chr1:80839563-80839582	None:intergenic	40.0%
	TGTTTGTGCTAGTGCTTCTT+AGG	+	Chr1:80836021-80836040	MsG0180004655.01.T01:intron	40.0%
	TTCCAAAATGCAAATCCACC+TGG	+	Chr1:80838284-80838303	MsG0180004655.01.T01:intron	40.0%
	TTCTGCACTACGTCATAGAA+TGG	+	Chr1:80837180-80837199	MsG0180004655.01.T01:intron	40.0%
	TTGTGTGTCTGTTGCATGTT+GGG	+	Chr1:80836367-80836386	MsG0180004655.01.T01:intron	40.0%
	TTTCGCGAGAAGGCAAAATA+TGG	-	Chr1:80835438-80835457	None:intergenic	40.0%
	TTTGTGTGTCTGTTGCATGT+TGG	+	Chr1:80836366-80836385	MsG0180004655.01.T01:intron	40.0%
!	AAAGCCAATATCTGAAACCC+TGG	+	Chr1:80837945-80837964	MsG0180004655.01.T01:intron	40.0%
!	AAATCCGAAGAGTACATGTG+GGG	+	Chr1:80837260-80837279	MsG0180004655.01.T01:intron	40.0%
!	AAATGTTTTCGTTGGGGTAG+GGG	-	Chr1:80837494-80837513	None:intergenic	40.0%
!	AACCCTGGTTCTCCAAAAAA+CGG	+	Chr1:80837960-80837979	MsG0180004655.01.T01:intron	40.0%
!	ACAAATGTTTTCGTTGGGGT+AGG	-	Chr1:80837496-80837515	None:intergenic	40.0%
!	CAAATGTTTTCGTTGGGGTA+GGG	-	Chr1:80837495-80837514	None:intergenic	40.0%
!	CCTACGCCTTTTGTATTGTA+CGG	+	Chr1:80837353-80837372	MsG0180004655.01.T01:intron	40.0%
!	CGCATCAAATAGCTCTCTTT+TGG	-	Chr1:80836240-80836259	None:intergenic	40.0%
!	GAAAATCCGAAGAGTACATG+TGG	+	Chr1:80837258-80837277	MsG0180004655.01.T01:intron	40.0%
!	GAATTGTTAGTTTGGCCCAT+TGG	+	Chr1:80839154-80839173	MsG0180004655.01.T01:intron	40.0%
!	GGCATAATACACAGCTTTGA+TGG	-	Chr1:80839914-80839933	None:intergenic	40.0%
!	TAATACACAGCTTTGATGGC+TGG	-	Chr1:80839910-80839929	None:intergenic	40.0%
!!	ACACATTTTGGCAAGCAAGT+TGG	-	Chr1:80836854-80836873	None:intergenic	40.0%
!!	AGTATCGACCCGTATATCTT+TGG	-	Chr1:80838658-80838677	None:intergenic	40.0%
!!	ATATCAAGTTGGACCTTACG+GGG	-	Chr1:80837773-80837792	None:intergenic	40.0%
!!	ATTATTAGGGTACCGATCCA+AGG	-	Chr1:80837381-80837400	None:intergenic	40.0%
!!	CACATTTTGGCAAGCAAGTT+GGG	-	Chr1:80836853-80836872	None:intergenic	40.0%
!!	CATGTCACTTTCTTTGATCG+AGG	+	Chr1:80838804-80838823	MsG0180004655.01.T01:intron	40.0%
!!	GATATCAAGTTGGACCTTAC+GGG	-	Chr1:80837774-80837793	None:intergenic	40.0%
!!	GGAAAATTCTAGAGTGTAGG+TGG	+	Chr1:80840106-80840125	MsG0180004655.01.T01:three_prime_UTR	40.0%
!!	GGATATCAAGTTGGACCTTA+CGG	-	Chr1:80837775-80837794	None:intergenic	40.0%
!!	TTATAACCACTTGATGGTGC+AGG	-	Chr1:80836896-80836915	None:intergenic	40.0%
!!	TTGCTGGAATTCTGGTTTAC+TGG	+	Chr1:80839372-80839391	MsG0180004655.01.T01:intron	40.0%
!!!	GGTAGTGCGTCTTAGTTTTT+TGG	+	Chr1:80839011-80839030	MsG0180004655.01.T01:intron	40.0%
!!!	TTCCGTTTTTTGGAGAACCA+GGG	-	Chr1:80837965-80837984	None:intergenic	40.0%
!!!	TTTCCGTTTTTTGGAGAACC+AGG	-	Chr1:80837966-80837985	None:intergenic	40.0%
	AAAGAGAGCAACTCCGCAAA+TGG	-	Chr1:80838391-80838410	None:intergenic	45.0%
	ACATGATTACAAGCAAGCCC+TGG	-	Chr1:80838338-80838357	None:intergenic	45.0%
	ACGGCACAATTGATGCTCTT+AGG	+	Chr1:80835546-80835565	MsG0180004655.01.T01:CDS	45.0%
	ACGGTGACTGCTATTGCTTA+TGG	+	Chr1:80835472-80835491	MsG0180004655.01.T01:exon	45.0%
	ACTGTGGCCCTCAGATTATT+GGG	+	Chr1:80837891-80837910	MsG0180004655.01.T01:intron	45.0%
	AGCTCTGCATGAAATAGGCA+TGG	-	Chr1:80839411-80839430	None:intergenic	45.0%
	ATCGACCCGTATATCTTTGG+AGG	-	Chr1:80838655-80838674	None:intergenic	45.0%
	ATGTCATGCAGGATCAAGCA+TGG	-	Chr1:80837029-80837048	None:intergenic	45.0%
	ATTGTACGGCCGTTAATGTC+AGG	-	Chr1:80837576-80837595	None:intergenic	45.0%
	CAGGGTCTAGGAATATACTG+TGG	+	Chr1:80837875-80837894	MsG0180004655.01.T01:intron	45.0%
	CCAAATAGATGCAGGATAGC+AGG	+	Chr1:80837856-80837875	MsG0180004655.01.T01:intron	45.0%
	CCAGTCCTCCAAAGATATAC+GGG	+	Chr1:80838647-80838666	MsG0180004655.01.T01:intron	45.0%
	CCTGCTATCCTGCATCTATT+TGG	-	Chr1:80837859-80837878	None:intergenic	45.0%
	CTAGCATTACTGCTAATGCG+TGG	+	Chr1:80837813-80837832	MsG0180004655.01.T01:intron	45.0%
	CTATTTCGCGCGGTTTAGTT+TGG	+	Chr1:80836403-80836422	MsG0180004655.01.T01:intron	45.0%
	CTGATATTGCTGCAGGATCA+AGG	-	Chr1:80839750-80839769	None:intergenic	45.0%
	CTGTGACTTACTCAAGCTCT+TGG	-	Chr1:80836268-80836287	None:intergenic	45.0%
	GAACCTTCTGATATTGCTGC+AGG	-	Chr1:80839757-80839776	None:intergenic	45.0%
	GACTATTCGATTTCGCGAGA+AGG	-	Chr1:80835448-80835467	None:intergenic	45.0%
	GATCCTGCAGCAATATCAGA+AGG	+	Chr1:80839751-80839770	MsG0180004655.01.T01:CDS	45.0%
	GCAGCAATATCAGAAGGTTC+TGG	+	Chr1:80839757-80839776	MsG0180004655.01.T01:CDS	45.0%
	GCCGACAGCAGAAAAGAAAA+AGG	+	Chr1:80839596-80839615	MsG0180004655.01.T01:CDS	45.0%
	GTAAGGGAAGTGATCACATC+TGG	+	Chr1:80839833-80839852	MsG0180004655.01.T01:CDS	45.0%
	GTGGAAATAAAGGAGGTTCC+TGG	-	Chr1:80839544-80839563	None:intergenic	45.0%
	TACTGTGGCCCTCAGATTAT+TGG	+	Chr1:80837890-80837909	MsG0180004655.01.T01:intron	45.0%
	TCTCACTTATCTCCTTTCCC+AGG	-	Chr1:80839490-80839509	None:intergenic	45.0%
	TTAGAGTCGCTGATGAACGA+CGG	+	Chr1:80835527-80835546	MsG0180004655.01.T01:CDS	45.0%
	TTCAATCCCGTGTTTGTGCA+TGG	-	Chr1:80838751-80838770	None:intergenic	45.0%
	TTTCTTGGCTGATCGGATCA+AGG	+	Chr1:80837067-80837086	MsG0180004655.01.T01:intron	45.0%
!	AAAGGCATACAAGGTGTCTG+AGG	-	Chr1:80839935-80839954	None:intergenic	45.0%
!	AATCCGAAGAGTACATGTGG+GGG	+	Chr1:80837261-80837280	MsG0180004655.01.T01:intron	45.0%
!	CCGTACAATACAAAAGGCGT+AGG	-	Chr1:80837356-80837375	None:intergenic	45.0%
!	CTCGCTACATGTTTTGCACA+TGG	+	Chr1:80837630-80837649	MsG0180004655.01.T01:intron	45.0%
!	TAAGTTGGAATCTCCCCGTA+AGG	+	Chr1:80837757-80837776	MsG0180004655.01.T01:intron	45.0%
!	TTTTGATGAGGGAAGGAGGA+AGG	-	Chr1:80835286-80835305	None:intergenic	45.0%
!!	AGAGTGTTTTGCCGATTGAG+TGG	+	Chr1:80839518-80839537	MsG0180004655.01.T01:CDS	45.0%
!!	CAGAAACTTGTTGAACTCCC+TGG	-	Chr1:80839814-80839833	None:intergenic	45.0%
!!	TGCCAGGTGGATTTGCATTT+TGG	-	Chr1:80838289-80838308	None:intergenic	45.0%
!!	TGGAGAAGAGGGGTCTTATT+TGG	-	Chr1:80838314-80838333	None:intergenic	45.0%
!!	ATATATATATATATATAAGT+TGG	+	Chr1:80837742-80837761	MsG0180004655.01.T01:intron	5.0%
	AGAACCACAACCCGATAAGG+AGG	+	Chr1:80839574-80839593	MsG0180004655.01.T01:CDS	50.0%
	AGACAACAATGGCCTGGGAA+AGG	+	Chr1:80839475-80839494	MsG0180004655.01.T01:CDS	50.0%
	ATTCTGCCTGCACCATCAAG+TGG	+	Chr1:80836887-80836906	MsG0180004655.01.T01:intron	50.0%
	GATGTGTCGTATTCGGGTAC+TGG	-	Chr1:80838206-80838225	None:intergenic	50.0%
	GCCCTATAAACAGGCTGTCT+TGG	+	Chr1:80838973-80838992	MsG0180004655.01.T01:intron	50.0%
	TGGAGAACCACAACCCGATA+AGG	+	Chr1:80839571-80839590	MsG0180004655.01.T01:CDS	50.0%
!	CCCGTATATCTTTGGAGGAC+TGG	-	Chr1:80838650-80838669	None:intergenic	50.0%
!	TGGTCTGTTTCTCAGCACCA+GGG	-	Chr1:80836220-80836239	None:intergenic	50.0%
!	TTGGCAAGCAAGTTGGGAGT+TGG	-	Chr1:80836847-80836866	None:intergenic	50.0%
!	TTGGTCTGTTTCTCAGCACC+AGG	-	Chr1:80836221-80836240	None:intergenic	50.0%
!!	ACTTGATGGTGCAGGCAGAA+TGG	-	Chr1:80836888-80836907	None:intergenic	50.0%
!!	AGTAAGGTTCTGAACACCCC+TGG	+	Chr1:80836200-80836219	MsG0180004655.01.T01:CDS	50.0%
!!	CGGGTCGATACTTTGGTTCT+TGG	+	Chr1:80838666-80838685	MsG0180004655.01.T01:intron	50.0%
!!	GTCTTATTTGGTGTGCCAGG+TGG	-	Chr1:80838302-80838321	None:intergenic	50.0%
	GAGGTTCCTGGCCACTCAAT+CGG	-	Chr1:80839532-80839551	None:intergenic	55.0%
	GATGCAGGATAGCAGGGTCT+AGG	+	Chr1:80837863-80837882	MsG0180004655.01.T01:intron	55.0%
	GATTACAAGCAAGCCCTGGC+TGG	-	Chr1:80838334-80838353	None:intergenic	55.0%
	GCAACCAAAGACATGGCCAC+TGG	+	Chr1:80838106-80838125	MsG0180004655.01.T01:intron	55.0%
	GGTGTGTCGTATTCGGGTAC+TGG	-	Chr1:80838132-80838151	None:intergenic	55.0%
	GTGCAGATGAAACTGCCACC+AGG	+	Chr1:80839702-80839721	MsG0180004655.01.T01:CDS	55.0%
	TCTGCTGTCGGCCTCCTTAT+CGG	-	Chr1:80839588-80839607	None:intergenic	55.0%
	TGATGAGGGAAGGAGGAAGG+AGG	-	Chr1:80835283-80835302	None:intergenic	55.0%
	TGCGAAGGCTAGGAGATGTG+AGG	+	Chr1:80840010-80840029	MsG0180004655.01.T01:three_prime_UTR	55.0%
	TGGCCCCCACATGTACTCTT+CGG	-	Chr1:80837267-80837286	None:intergenic	55.0%
	TTGCTGCAGGATCAAGGACC+TGG	-	Chr1:80839744-80839763	None:intergenic	55.0%
!	GGTCTGTTTCTCAGCACCAG+GGG	-	Chr1:80836219-80836238	None:intergenic	55.0%
!	TGGGTGCCGTGTTAGTTTCG+AGG	-	Chr1:80835335-80835354	None:intergenic	55.0%
!!	GGGGTCTTATTTGGTGTGCC+AGG	-	Chr1:80838305-80838324	None:intergenic	55.0%
!!	GTTTTGCCGATTGAGTGGCC+AGG	+	Chr1:80839523-80839542	MsG0180004655.01.T01:CDS	55.0%
!!	TCGGGTACTGGCCATGTCTT+TGG	-	Chr1:80838194-80838213	None:intergenic	55.0%
	AAGACCCCTCTTCTCCAGCC+AGG	+	Chr1:80838317-80838336	MsG0180004655.01.T01:intron	60.0%
	AAGCCCTGGCTGGAGAAGAG+GGG	-	Chr1:80838324-80838343	None:intergenic	60.0%
	AGACCCCTCTTCTCCAGCCA+GGG	+	Chr1:80838318-80838337	MsG0180004655.01.T01:intron	60.0%
	AGGATCAAGGACCTGGTGGC+GGG	-	Chr1:80839737-80839756	None:intergenic	60.0%
	CAAGCCCTGGCTGGAGAAGA+GGG	-	Chr1:80838325-80838344	None:intergenic	60.0%
	CAGGATCAAGGACCTGGTGG+CGG	-	Chr1:80839738-80839757	None:intergenic	60.0%
	CTGCAGGATCAAGGACCTGG+TGG	-	Chr1:80839741-80839760	None:intergenic	60.0%
	CTGCTGTCGGCCTCCTTATC+GGG	-	Chr1:80839587-80839606	None:intergenic	60.0%
	CTGGCCAGTGGCCATGTCTT+TGG	-	Chr1:80838113-80838132	None:intergenic	60.0%
!	TCGGCCTCCTTATCGGGTTG+TGG	-	Chr1:80839581-80839600	None:intergenic	60.0%
!!	CGTATTCGGGTACTGGCCAG+TGG	-	Chr1:80838125-80838144	None:intergenic	60.0%
!!	GGGGTTTGGTGTTCGACACG+TGG	+	Chr1:80835945-80835964	MsG0180004655.01.T01:intron	60.0%
	GCAAGCCCTGGCTGGAGAAG+AGG	-	Chr1:80838326-80838345	None:intergenic	65.0%
	GGCGGGATCAGAAGACCTGG+TGG	-	Chr1:80839720-80839739	None:intergenic	65.0%
	GGTCTTCTGATCCCGCCACC+AGG	+	Chr1:80839723-80839742	MsG0180004655.01.T01:CDS	65.0%
!!	GGTGGCGGGATCAGAAGACC+TGG	-	Chr1:80839723-80839742	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	80835227	80840251	80835227	ID=MsG0180004655.01;Name=MsG0180004655.01
Chr1	mRNA	80835227	80840251	80835227	ID=MsG0180004655.01.T01;Parent=MsG0180004655.01;Name=MsG0180004655.01.T01;_AED=0.37;_eAED=0.37;_QI=264\|1\|1\|1\|1\|1\|3\|362\|228
Chr1	exon	80835227	80835598	80835227	ID=MsG0180004655.01.T01:exon:34200;Parent=MsG0180004655.01.T01
Chr1	exon	80836161	80836276	80836161	ID=MsG0180004655.01.T01:exon:34201;Parent=MsG0180004655.01.T01
Chr1	exon	80839427	80840251	80839427	ID=MsG0180004655.01.T01:exon:34202;Parent=MsG0180004655.01.T01
Chr1	five_prime_UTR	80835227	80835490	80835227	ID=MsG0180004655.01.T01:five_prime_utr;Parent=MsG0180004655.01.T01
Chr1	CDS	80835491	80835598	80835491	ID=MsG0180004655.01.T01:cds;Parent=MsG0180004655.01.T01
Chr1	CDS	80836161	80836276	80836161	ID=MsG0180004655.01.T01:cds;Parent=MsG0180004655.01.T01
Chr1	CDS	80839427	80839889	80839427	ID=MsG0180004655.01.T01:cds;Parent=MsG0180004655.01.T01
Chr1	three_prime_UTR	80839890	80840251	80839890	ID=MsG0180004655.01.T01:three_prime_utr;Parent=MsG0180004655.01.T01

Gene Sequence

>MsG0180004655.01.T01

ATGGCTTCTTCTTCGGTGATCACTCCCGAAGATGTATTAGAGTCGCTGATGAACGACGGCACAATTGATGCTCTTAGGTTGAAGATCATCAATCAGCTCAAAGCCAATGAGGAACTCAAGAGTACTACAATAAAGATGGCTGAACAGAGTAAGGTTCTGAACACCCCTGGTGCTGAGAAACAGACCAAAAGAGAGCTATTTGATGCGCTTCGCCAAGAGCTTGAAGCTTCTGTTCTTGAGAAAGCATCAAAATCAGTTTGGGATTTAATTTTAGACAACAATGGCCTGGGAAAGGAGATAAGTGAGACTGTTGAAAGAGTGTTTTGCCGATTGAGTGGCCAGGAACCTCCTTTATTTCCACTTCTAAATGGAGAACCACAACCCGATAAGGAGGCCGACAGCAGAAAAGAAAAAGGTAAAGGAAAGCTGAAAGAAAATGAAAATACGAGTTTGATCACTCCATCAAAAAAAAGAAGCTTCAGTGAAACAAATTTGGACGGTGCAGATGAAACTGCCACCAGGTCTTCTGATCCCGCCACCAGGTCCTTGATCCTGCAGCAATATCAGAAGGTTCTGGCAAGTCACCTTTATCAATTTCAAAGACTTGACCAGGGAGTTCAACAAGTTTCTGTAAGGGAAGTGATCACATCTGGTAAATATATTGTTGAACTTTTAGGATTTCACTAG

Protein sequence

>MsG0180004655.01.T01

MASSSVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEKQTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFPLLNGEPQPDKEADSRKEKGKGKLKENENTSLITPSKKRSFSETNLDGADETATRSSDPATRSLILQQYQKVLASHLYQFQRLDQGVQQVSVREVITSGKYIVELLGFH*