AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024733.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024733.01.T01 MTR_5g015500 99.662 592 2 0 1 592 1 592 0.0 1232
MsG0580024733.01.T01 MTR_5g015500 96.029 554 14 2 39 592 7 552 0.0 1090
MsG0580024733.01.T01 MTR_8g036015 56.774 155 67 0 347 501 3 157 5.21e-57 189
MsG0580024733.01.T01 MTR_7g105220 51.370 146 71 0 347 492 12 157 7.65e-48 165
MsG0580024733.01.T01 MTR_2g085075 49.007 151 77 0 347 497 464 614 1.35e-42 162
MsG0580024733.01.T01 MTR_2g023120 46.988 166 86 2 341 504 9 174 5.10e-36 142
MsG0580024733.01.T01 MTR_7g095750 50.340 147 59 5 358 492 25 169 1.01e-32 134
MsG0580024733.01.T01 MTR_4g086760 44.737 152 71 4 354 493 18 168 1.73e-32 129
MsG0580024733.01.T01 MTR_4g086760 44.737 152 71 4 354 493 18 168 2.03e-32 127
MsG0580024733.01.T01 MTR_4g086760 44.737 152 71 4 354 493 18 168 2.45e-32 127
MsG0580024733.01.T01 MTR_8g079690 40.609 197 82 6 354 516 18 213 2.89e-32 128
MsG0580024733.01.T01 MTR_6g084140 39.521 167 93 2 347 505 3 169 1.44e-31 130
MsG0580024733.01.T01 MTR_6g084140 39.521 167 93 2 347 505 20 186 1.59e-31 130
MsG0580024733.01.T01 MTR_7g116340 52.206 136 53 4 354 478 18 152 2.01e-31 120
MsG0580024733.01.T01 MTR_1g117010 47.222 144 71 4 354 493 94 236 6.84e-31 121
MsG0580024733.01.T01 MTR_1g117010 47.222 144 71 4 354 493 94 236 6.84e-31 121
MsG0580024733.01.T01 MTR_8g442420 38.922 167 94 2 347 505 3 169 3.30e-30 125
MsG0580024733.01.T01 MTR_1g085560 47.586 145 70 5 354 493 99 242 5.76e-30 119
MsG0580024733.01.T01 MTR_7g110980 45.833 144 73 4 354 493 110 252 2.26e-29 117
MsG0580024733.01.T01 MTR_4g075290 49.265 136 57 4 354 478 18 152 1.44e-28 112
MsG0580024733.01.T01 MTR_3g117750 48.529 136 58 4 354 478 26 160 7.90e-28 110
MsG0580024733.01.T01 MTR_8g040180 45.455 143 67 4 354 486 32 173 1.22e-27 110
MsG0580024733.01.T01 MTR_3g463900 47.761 134 58 4 354 476 48 180 1.24e-27 110
MsG0580024733.01.T01 MTR_3g070500 42.604 169 70 6 325 476 52 210 1.09e-26 108
MsG0580024733.01.T01 MTR_4g073650 42.000 150 75 4 354 492 60 208 1.40e-24 102
MsG0580024733.01.T01 MTR_3g070500 45.000 140 50 6 325 447 52 181 4.36e-22 94.4
MsG0580024733.01.T01 MTR_3g107660 40.411 146 73 5 359 492 29 172 3.63e-19 92.4
MsG0580024733.01.T01 MTR_1g094065 34.641 153 92 3 345 496 80 225 1.35e-17 82.8
MsG0580024733.01.T01 MTR_1g011980 39.850 133 66 5 358 478 25 155 1.02e-16 84.3
MsG0580024733.01.T01 MTR_1g035360 30.464 151 100 3 345 495 79 224 3.37e-13 69.7
MsG0580024733.01.T01 MTR_3g085705 39.091 110 62 3 377 486 21 125 9.40e-13 65.9
MsG0580024733.01.T01 MTR_3g070500 40.000 120 45 6 325 427 52 161 1.37e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024733.01.T01 AT5G67530 76.254 598 133 5 1 592 1 595 0.0 908
MsG0580024733.01.T01 AT1G01940 55.484 155 69 0 347 501 3 157 3.34e-56 187
MsG0580024733.01.T01 AT2G36130 50.685 146 72 0 347 492 12 157 2.56e-49 169
MsG0580024733.01.T01 AT3G44600 50.331 151 75 0 347 497 478 628 3.73e-42 161
MsG0580024733.01.T01 AT4G33060 44.910 167 89 3 341 504 9 175 2.01e-39 151
MsG0580024733.01.T01 AT1G53720 40.719 167 91 2 347 505 3 169 6.64e-34 132
MsG0580024733.01.T01 AT5G13120 48.951 143 68 4 354 492 107 248 7.80e-34 130
MsG0580024733.01.T01 AT5G13120 48.951 143 68 4 354 492 103 244 8.44e-34 129
MsG0580024733.01.T01 AT3G63400 49.660 147 60 5 358 492 25 169 7.44e-33 130
MsG0580024733.01.T01 AT1G53720 40.719 167 91 2 347 505 3 169 9.33e-33 132
MsG0580024733.01.T01 AT3G56070 47.799 159 70 5 354 501 18 174 1.54e-32 123
MsG0580024733.01.T01 AT3G56070 47.799 159 70 5 354 501 18 174 1.54e-32 123
MsG0580024733.01.T01 AT3G63400 49.660 147 60 5 358 492 25 169 7.57e-32 130
MsG0580024733.01.T01 AT3G63400 49.660 147 60 5 358 492 25 169 7.57e-32 130
MsG0580024733.01.T01 AT3G63400 49.660 147 60 5 358 492 25 169 7.57e-32 130
MsG0580024733.01.T01 AT2G15790 45.033 151 70 4 354 492 18 167 4.66e-31 124
MsG0580024733.01.T01 AT2G16600 48.000 150 65 5 354 492 19 166 7.29e-30 116
MsG0580024733.01.T01 AT3G62030 46.154 143 72 4 354 492 108 249 1.44e-29 118
MsG0580024733.01.T01 AT3G62030 46.154 143 72 4 354 492 109 250 1.51e-29 117
MsG0580024733.01.T01 AT4G34870 47.020 151 67 5 354 493 18 166 3.36e-29 114
MsG0580024733.01.T01 AT4G38740 46.000 150 68 5 354 492 18 165 3.64e-29 114
MsG0580024733.01.T01 AT3G62030 46.154 143 72 4 354 492 162 303 4.20e-29 118
MsG0580024733.01.T01 AT2G21130 45.333 150 69 5 354 492 19 166 4.24e-29 114
MsG0580024733.01.T01 AT3G55920 49.254 134 56 4 354 476 73 205 1.07e-28 114
MsG0580024733.01.T01 AT2G29960 49.254 134 56 4 354 476 46 178 2.03e-27 110
MsG0580024733.01.T01 AT2G29960 49.254 134 56 4 354 476 46 178 2.03e-27 110
MsG0580024733.01.T01 AT5G58710 42.675 157 66 5 354 487 49 204 5.72e-26 106
MsG0580024733.01.T01 AT2G38730 42.000 150 76 4 354 493 46 194 2.02e-25 104
MsG0580024733.01.T01 AT4G34960 40.000 150 78 4 354 492 61 209 5.24e-23 98.2
MsG0580024733.01.T01 AT2G16600 44.615 130 56 3 354 481 19 134 7.92e-22 92.8
MsG0580024733.01.T01 AT2G29960 44.030 134 53 5 354 476 46 168 8.29e-21 90.9
MsG0580024733.01.T01 AT4G34960 46.667 105 44 4 354 447 61 164 3.87e-19 85.5
MsG0580024733.01.T01 AT2G47320 31.646 158 104 3 339 496 72 225 5.03e-16 78.2
MsG0580024733.01.T01 AT4G32420 33.333 147 84 5 358 492 25 169 1.44e-12 71.2
MsG0580024733.01.T01 AT4G32420 33.333 147 84 5 358 492 25 169 1.44e-12 71.2
MsG0580024733.01.T01 AT4G32420 33.333 147 84 5 358 492 25 169 1.44e-12 71.2
MsG0580024733.01.T01 AT4G32420 33.333 147 84 5 358 492 25 169 1.44e-12 71.2
MsG0580024733.01.T01 AT1G53780 38.043 92 56 1 415 505 4 95 1.93e-12 70.5
MsG0580024733.01.T01 AT4G32420 33.835 133 75 4 358 478 25 156 4.98e-12 69.3

Find 153 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAATTGTATTGAAAATT+TGG 0.022268 5:+8963035 None:intergenic
TCCCGACATGTTTATGTTAT+AGG 0.188740 5:+8965106 None:intergenic
ATCATTTGCATTCTTCTCTT+TGG 0.192528 5:+8963381 None:intergenic
CCTTCCAGAGTGGACTAATT+TGG 0.194082 5:+8964205 None:intergenic
GATAACAAATTAACAATCTA+TGG 0.198529 5:+8969295 None:intergenic
TGTACATATCCCTTCTTCTT+TGG 0.242086 5:+8964527 None:intergenic
GTTGCTTCTTCCCCATTGTT+AGG 0.247086 5:+8969222 None:intergenic
ACTCCATATATTATAAAATA+TGG 0.273786 5:-8968459 MsG0580024733.01.T01:CDS
GAGTTAAGTTCATCCTTAAA+AGG 0.274372 5:+8964227 None:intergenic
TGGGATTGGGTTCCGGTTGC+CGG 0.288955 5:+8969315 None:intergenic
ACGCACGCGCAGCAATAAAA+AGG 0.292893 5:+8969104 None:intergenic
TTGTGATCGTGCAGCTAAAA+TGG 0.299588 5:+8964974 None:intergenic
GTAGAGGTGGTGAATCAATT+TGG 0.300503 5:-8964256 MsG0580024733.01.T01:CDS
TGGCGGAAAATTTAAATATC+TGG 0.302090 5:+8962816 None:intergenic
CAATCTATGGGATTGGGTTC+CGG 0.308757 5:+8969308 None:intergenic
TTCGGTTGCCCATTCAGTTT+TGG 0.317221 5:+8969175 None:intergenic
ACAAATTGTATTGAAAATTT+GGG 0.320416 5:+8963036 None:intergenic
ACACTACTGGCGCTGCTTCC+CGG 0.320784 5:-8964619 MsG0580024733.01.T01:CDS
TATGGTAAACATCCTGTTAC+TGG 0.327911 5:-8968441 MsG0580024733.01.T01:CDS
GACAGAAATCTTGATCTATT+CGG 0.337555 5:+8969431 None:intergenic
GCTTGCTCTTCTTCCTCATC+TGG 0.351194 5:+8963409 None:intergenic
TAGAGGTGGTGAATCAATTT+GGG 0.354211 5:-8964255 MsG0580024733.01.T01:CDS
GATGTTCTACGGTGTATTAT+TGG 0.354716 5:+8969357 None:intergenic
TCCTCATCTGGCTCGGTGTA+AGG 0.356961 5:+8963421 None:intergenic
AACTGAATGGGCAACCGAAT+GGG 0.359925 5:-8969171 MsG0580024733.01.T01:CDS
AGCCACATGCATAGCTATTC+TGG 0.365801 5:+8964824 None:intergenic
ACCTTCTGGTCAAGTGCATT+AGG 0.369714 5:+8965329 None:intergenic
ATCAGAAAATCGCCGGCAAC+CGG 0.371876 5:-8969327 MsG0580024733.01.T01:five_prime_UTR
AGGAGCTCCATCGGTCGATT+TGG 0.372599 5:+8964938 None:intergenic
AACTGACCTGAATTGTTATA+AGG 0.374079 5:+8965442 None:intergenic
CTGCCATCCGGTGTACAAAC+TGG 0.379181 5:+8968982 None:intergenic
GATGAAGTTCTCGCATGCCC+TGG 0.382051 5:+8964451 None:intergenic
GGATGACCTTATAACAATTC+AGG 0.382294 5:-8965448 MsG0580024733.01.T01:intron
TCACCGACGAGGCATTTACT+AGG 0.383522 5:-8965470 MsG0580024733.01.T01:CDS
GAGTTCTTGTGAAAAGTTAG+TGG 0.396927 5:+8968390 None:intergenic
TTGCTTCTTCCCCATTGTTA+GGG 0.397518 5:+8969223 None:intergenic
TTCAAGGGAGCTCCAGTAAC+AGG 0.402194 5:+8968429 None:intergenic
ACTTGACCAGAAGGTTCTTC+TGG 0.406350 5:-8965321 MsG0580024733.01.T01:CDS
AAATTAACAATCTATGGGAT+TGG 0.407408 5:+8969301 None:intergenic
CAAAATCCAGAAGAACCTTC+TGG 0.412431 5:+8965315 None:intergenic
GATTCAGATGTTCCAGCTCC+AGG 0.414464 5:+8963222 None:intergenic
CTCTTCTTCCTCATCTGGCT+CGG 0.430426 5:+8963414 None:intergenic
GGAGCTGGAACATCTGAATC+TGG 0.432526 5:-8963219 MsG0580024733.01.T01:CDS
AATTAACAATCTATGGGATT+GGG 0.432754 5:+8969302 None:intergenic
AATGAGATCTTGCTGCTTCA+AGG 0.435416 5:+8968413 None:intergenic
ATCGACCGATGGAGCTCCTC+AGG 0.442437 5:-8964934 MsG0580024733.01.T01:CDS
CAGGAGGAAATCAAGATAAC+AGG 0.443423 5:-8963463 MsG0580024733.01.T01:CDS
GTGAAAACTTTGTTTAGCAC+TGG 0.453174 5:+8965680 None:intergenic
GGCTCATGGTATAGTAATCC+TGG 0.456340 5:-8963240 MsG0580024733.01.T01:CDS
AAACAAATGCTTAAAGAGCT+TGG 0.459982 5:-8965077 MsG0580024733.01.T01:CDS
TGAGAAGAATCCAAAGAAGA+AGG 0.463758 5:-8964537 MsG0580024733.01.T01:CDS
GACATGTTTATGTTATAGGC+TGG 0.464280 5:+8965110 None:intergenic
CTATGCATGTGGCTGGTGAC+AGG 0.466621 5:-8964815 MsG0580024733.01.T01:CDS
ACAGGTGTTGGCGGTGGTGT+TGG 0.468240 5:-8963192 MsG0580024733.01.T01:CDS
TTGGCAAATACTTGAAAGCT+AGG 0.473260 5:-8963173 MsG0580024733.01.T01:CDS
TGGAAATGTCTTCTGCTATG+AGG 0.475926 5:-8965624 MsG0580024733.01.T01:intron
AACAGTGGCCCACATACTAA+TGG 0.478597 5:-8964164 MsG0580024733.01.T01:CDS
GGTCGGTCACTGTCATCAAC+AGG 0.480063 5:+8964032 None:intergenic
GTTCTTAACCAAAACTGAAT+GGG 0.482844 5:-8969183 MsG0580024733.01.T01:CDS
CCAAATTAGTCCACTCTGGA+AGG 0.483082 5:-8964205 MsG0580024733.01.T01:CDS
TGTTCTTAACCAAAACTGAA+TGG 0.483873 5:-8969184 MsG0580024733.01.T01:CDS
GGATTTGTAACCTCCCCATT+CGG 0.485009 5:+8969157 None:intergenic
GTTAAAAGTCGTTACACTAC+TGG 0.485111 5:-8964632 MsG0580024733.01.T01:CDS
GCCTATAACATAAACATGTC+GGG 0.491731 5:-8965107 MsG0580024733.01.T01:CDS
TACACTAGCAACAATGGAAA+AGG 0.495791 5:-8964057 MsG0580024733.01.T01:CDS
ACATCTGAATCTGGAGGTAC+AGG 0.497797 5:-8963210 MsG0580024733.01.T01:CDS
CTCACCATCTTTGCATTCAC+CGG 0.498409 5:+8964789 None:intergenic
GAAAGCTAGGAATGCTCCAC+CGG 0.498700 5:-8963160 MsG0580024733.01.T01:CDS
ATTGTGGCAGTCAAAACTAC+TGG 0.503952 5:-8965644 MsG0580024733.01.T01:CDS
GGAAAGGAAACTGCATTGCA+TGG 0.504017 5:-8965044 MsG0580024733.01.T01:CDS
TGTGAACGTGGATATTATAA+CGG 0.504461 5:-8964422 MsG0580024733.01.T01:CDS
GCTGCATCTGCCGCAGTACA+TGG 0.504884 5:-8964894 MsG0580024733.01.T01:CDS
ATGAAGTTCTCGCATGCCCT+GGG 0.508823 5:+8964452 None:intergenic
ATGAGATCTTGCTGCTTCAA+GGG 0.514142 5:+8968414 None:intergenic
AAACTGAATGGGCAACCGAA+TGG 0.514848 5:-8969172 MsG0580024733.01.T01:CDS
TCGACAGCAGCAGGTTCAGC+CGG 0.519443 5:+8963141 None:intergenic
AACTGGGAACCATTAGTATG+TGG 0.522616 5:+8964155 None:intergenic
GGAAAATTTAAATATCTGGC+AGG 0.523175 5:+8962820 None:intergenic
CGACACTGGTACAGCCGTTG+TGG 0.526101 5:-8963121 MsG0580024733.01.T01:CDS
TTCATCACGCTTTGTGAACG+TGG 0.527470 5:-8964434 MsG0580024733.01.T01:CDS
TGATGACAGTGACCGACCTC+TGG 0.527741 5:-8964027 MsG0580024733.01.T01:intron
ACATCGAAGACGCTGCCATC+CGG 0.528738 5:+8968970 None:intergenic
TGGTATAGTAATCCTGGAGC+TGG 0.532781 5:-8963234 MsG0580024733.01.T01:CDS
TCCTAATGCACTTGACCAGA+AGG 0.536364 5:-8965330 MsG0580024733.01.T01:CDS
ATGATGTAGAAGTAAAAGAC+CGG 0.536884 5:+8964600 None:intergenic
GGAGGTACAGGTGTTGGCGG+TGG 0.538393 5:-8963198 MsG0580024733.01.T01:CDS
TGCACTGTGATATAGCGCCC+AGG 0.543902 5:-8964469 MsG0580024733.01.T01:CDS
TGATATAGGGAGATGTTCTA+CGG 0.544919 5:+8969346 None:intergenic
AAAGAGCTTGGAACTGAGCA+AGG 0.545096 5:-8965065 MsG0580024733.01.T01:CDS
GTTCATAGTGGTTAATTACA+TGG 0.546602 5:+8962796 None:intergenic
GATCCTACTGGTACTGGTAG+AGG 0.546770 5:-8964272 MsG0580024733.01.T01:CDS
AGCCTATAACATAAACATGT+CGG 0.547101 5:-8965108 MsG0580024733.01.T01:CDS
CAAATTAGTCCACTCTGGAA+GGG 0.547791 5:-8964204 MsG0580024733.01.T01:CDS
GGCACCGGTGAATGCAAAGA+TGG 0.550158 5:-8964793 MsG0580024733.01.T01:intron
GGTGGCGATCCTACTGGTAC+TGG 0.550338 5:-8964278 MsG0580024733.01.T01:CDS
GAAAGGAAACTGCATTGCAT+GGG 0.550522 5:-8965043 MsG0580024733.01.T01:CDS
GAGAAGAATCCAAAGAAGAA+GGG 0.558567 5:-8964536 MsG0580024733.01.T01:CDS
TTCGCATTTCAGGACAAGGT+TGG 0.559596 5:-8963261 MsG0580024733.01.T01:intron
TCCCTATATCAGAAAATCGC+CGG 0.560626 5:-8969334 MsG0580024733.01.T01:five_prime_UTR
AAATTAGTCCACTCTGGAAG+GGG 0.560803 5:-8964203 MsG0580024733.01.T01:CDS
TGATTTGCACCGCCGTATGG+AGG 0.561038 5:+8969391 None:intergenic
GAACCTGCTGCTGTCGACAC+TGG 0.561503 5:-8963135 MsG0580024733.01.T01:CDS
ATACAAGGTGGCGATCCTAC+TGG 0.561736 5:-8964284 MsG0580024733.01.T01:CDS
ATAACAAATTAACAATCTAT+GGG 0.562509 5:+8969296 None:intergenic
GTACCAGTGTCGACAGCAGC+AGG 0.562548 5:+8963132 None:intergenic
TTTGTTGATTATTACTGTGG+TGG 0.562725 5:+8969248 None:intergenic
GACACTGGTACAGCCGTTGT+GGG 0.562924 5:-8963120 MsG0580024733.01.T01:CDS
GTACAAACTGGAAACTCAAA+CGG 0.564858 5:+8968994 None:intergenic
GAATCTGGAGGTACAGGTGT+TGG 0.565131 5:-8963204 MsG0580024733.01.T01:CDS
TCTGGAGGTACAGGTGTTGG+CGG 0.566682 5:-8963201 MsG0580024733.01.T01:CDS
AACTCCAAATTAGTCCACTC+TGG 0.569288 5:-8964209 MsG0580024733.01.T01:CDS
ACAGCAGCAGGTTCAGCCGG+TGG 0.572103 5:+8963144 None:intergenic
TTCAGGACAAGGTTGGCTCA+TGG 0.574231 5:-8963254 MsG0580024733.01.T01:intron
TAAAATGGCAGCGAGTGCAG+CGG 0.579946 5:+8964989 None:intergenic
GAGTGCCTGAGGAGCTCCAT+CGG 0.581000 5:+8964929 None:intergenic
TGTGGCTGGTGACAGGGCAC+CGG 0.581705 5:-8964808 MsG0580024733.01.T01:CDS
AATTTGAAAATTGACGATGA+AGG 0.585312 5:-8965278 MsG0580024733.01.T01:intron
ACTGAATGGGCAACCGAATG+GGG 0.586736 5:-8969170 MsG0580024733.01.T01:CDS
TGGAAGGGGTGTAGTTAGCA+TGG 0.588160 5:-8964189 MsG0580024733.01.T01:CDS
CACCGACGAGGCATTTACTA+GGG 0.589724 5:-8965469 MsG0580024733.01.T01:CDS
ATTGACTACACTAGCAACAA+TGG 0.592417 5:-8964063 MsG0580024733.01.T01:CDS
ATCCCTAGTAAATGCCTCGT+CGG 0.595336 5:+8965467 None:intergenic
TCCTTACACCGAGCCAGATG+AGG 0.597914 5:-8963422 MsG0580024733.01.T01:CDS
GCTTGGAACTGAGCAAGGAA+AGG 0.602840 5:-8965060 MsG0580024733.01.T01:CDS
AGAATAGCTATGCATGTGGC+TGG 0.603645 5:-8964822 MsG0580024733.01.T01:CDS
AAGAGAAAAGCAGTTGTCAG+TGG 0.606073 5:-8963093 MsG0580024733.01.T01:CDS
CACTGAATTTACCCACATTG+TGG 0.607025 5:-8965660 MsG0580024733.01.T01:CDS
TGAGTTTCCAGTTTGTACAC+CGG 0.608147 5:-8968989 MsG0580024733.01.T01:CDS
GCACTGTGATATAGCGCCCA+GGG 0.612039 5:-8964468 MsG0580024733.01.T01:CDS
TAGTAAATGCCTCGTCGGTG+AGG 0.617674 5:+8965472 None:intergenic
TATGCATGTGGCTGGTGACA+GGG 0.618344 5:-8964814 MsG0580024733.01.T01:CDS
ACTGGGAACCATTAGTATGT+GGG 0.619509 5:+8964156 None:intergenic
TTTCCAGTTTGTACACCGGA+TGG 0.621583 5:-8968985 MsG0580024733.01.T01:CDS
GTTGCACTCATGTTCCGTTG+TGG 0.623797 5:-8962866 MsG0580024733.01.T01:three_prime_UTR
AAAGGAAACTGCATTGCATG+GGG 0.624761 5:-8965042 MsG0580024733.01.T01:CDS
GAAGATTCCAAATCGACCGA+TGG 0.632221 5:-8964945 MsG0580024733.01.T01:CDS
AGAGGTGGTGAATCAATTTG+GGG 0.636786 5:-8964254 MsG0580024733.01.T01:CDS
TGATGTAGAAGTAAAAGACC+GGG 0.648897 5:+8964601 None:intergenic
GTAGTTAGCATGGCAAACAG+TGG 0.660220 5:-8964179 MsG0580024733.01.T01:CDS
TCTACAATACTGAGTGCCTG+AGG 0.667099 5:+8964918 None:intergenic
CCACCTCTACCAGTACCAGT+AGG 0.670311 5:+8964269 None:intergenic
CCTACTGGTACTGGTAGAGG+TGG 0.680494 5:-8964269 MsG0580024733.01.T01:CDS
GAATGGGCAACCGAATGGGG+AGG 0.684057 5:-8969167 MsG0580024733.01.T01:CDS
ATTTACGACTCACCAGAGGT+CGG 0.685790 5:+8964015 None:intergenic
TGCCAGAATAGCTATGCATG+TGG 0.688708 5:-8964826 MsG0580024733.01.T01:CDS
GAAGGAGCTCCTCACCGACG+AGG 0.690654 5:-8965481 MsG0580024733.01.T01:CDS
GCTGGAACATCTGAATCTGG+AGG 0.694916 5:-8963216 MsG0580024733.01.T01:CDS
GTACAACTGCATACAACACA+CGG 0.699245 5:-8964509 MsG0580024733.01.T01:CDS
CATAGTGGTTAATTACATGG+CGG 0.706231 5:+8962799 None:intergenic
GTAAAATAACAAGACCACAA+CGG 0.709975 5:+8962852 None:intergenic
AAGGAAACTGCATTGCATGG+GGG 0.711732 5:-8965041 MsG0580024733.01.T01:CDS
TGCACTTCTTCCATGTACTG+CGG 0.716775 5:+8964884 None:intergenic
TAACTACACCCCTTCCAGAG+TGG 0.717283 5:+8964195 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATATGACAAAA+CGG - Chr5:8964714-8964733 MsG0580024733.01.T01:intron 10.0%
!!! TTACCATATTTTATAATATA+TGG + Chr5:8963808-8963827 None:intergenic 10.0%
!! AATTAACTAACTAATTAACT+AGG + Chr5:8964215-8964234 None:intergenic 15.0%
!! AATTTAATCAATCGTAATAA+TGG - Chr5:8964440-8964459 MsG0580024733.01.T01:CDS 15.0%
!! ACAAATTGTATTGAAAATTT+GGG + Chr5:8969228-8969247 None:intergenic 15.0%
!! ACTCCATATATTATAAAATA+TGG - Chr5:8963802-8963821 MsG0580024733.01.T01:intron 15.0%
!! ATAACAAATTAACAATCTAT+GGG + Chr5:8962968-8962987 None:intergenic 15.0%
!! ATAAGTAATCTCAAATATTA+TGG + Chr5:8968922-8968941 None:intergenic 15.0%
!! ATTTAAAAAATAAGCTCTTA+AGG + Chr5:8968624-8968643 None:intergenic 15.0%
!! CTATTGAAAATAGTTTAATT+TGG + Chr5:8966262-8966281 None:intergenic 15.0%
!! TACAAATTGTATTGAAAATT+TGG + Chr5:8969229-8969248 None:intergenic 15.0%
!!! ACTCATTAAATTTTCATTAT+GGG - Chr5:8968479-8968498 MsG0580024733.01.T01:intron 15.0%
!!! ATTTTTTTCTCACTTTTATA+AGG - Chr5:8968949-8968968 MsG0580024733.01.T01:intron 15.0%
!!! CTTTTTAAAAATTGTATGAA+GGG - Chr5:8967562-8967581 MsG0580024733.01.T01:intron 15.0%
!!! GATTGTATTTTCATATTTAA+GGG + Chr5:8964119-8964138 None:intergenic 15.0%
!!! TGAATCTTATTTATTACAAT+AGG + Chr5:8964633-8964652 None:intergenic 15.0%
!!! TGATTGTATTTTCATATTTA+AGG + Chr5:8964120-8964139 None:intergenic 15.0%
!!! TTAAGAGCTTATTTTTTAAA+TGG - Chr5:8968623-8968642 MsG0580024733.01.T01:intron 15.0%
!!! TTTTATATATGTATGTTTGT+GGG - Chr5:8966716-8966735 MsG0580024733.01.T01:intron 15.0%
!!! TTTTTATATATGTATGTTTG+TGG - Chr5:8966715-8966734 MsG0580024733.01.T01:intron 15.0%
!!! TTTTTTTTGAAATATTGGTA+GGG - Chr5:8964188-8964207 MsG0580024733.01.T01:CDS 15.0%
!!! TTTTTTTTTGAAATATTGGT+AGG - Chr5:8964187-8964206 MsG0580024733.01.T01:CDS 15.0%
!! AAAAAAATGTCCATTATGTT+TGG + Chr5:8964305-8964324 None:intergenic 20.0%
!! AAAAGAGATAAATGAAGAAA+AGG - Chr5:8964801-8964820 MsG0580024733.01.T01:CDS 20.0%
!! AAATATGAAAATACAATCAC+AGG - Chr5:8964121-8964140 MsG0580024733.01.T01:CDS 20.0%
!! ATACATAGAATAATGATTAC+TGG + Chr5:8967588-8967607 None:intergenic 20.0%
!! ATTTGTACAATATGAAAAAC+TGG + Chr5:8968126-8968145 None:intergenic 20.0%
!! GATAACAAATTAACAATCTA+TGG + Chr5:8962969-8962988 None:intergenic 20.0%
!! TACCATCTACAAATTAAATT+AGG + Chr5:8966695-8966714 None:intergenic 20.0%
!! TACTTTCTTCCTTATTATTT+GGG + Chr5:8965595-8965614 None:intergenic 20.0%
!! TCAACAAAAGTTAATTTAAG+CGG - Chr5:8965894-8965913 MsG0580024733.01.T01:intron 20.0%
!! TTACATGCTTATTTATTCTT+TGG - Chr5:8968771-8968790 MsG0580024733.01.T01:intron 20.0%
!! TTGATCATAATAGGATATTA+TGG - Chr5:8965314-8965333 MsG0580024733.01.T01:CDS 20.0%
!! TTTGTACAATATGAAAAACT+GGG + Chr5:8968125-8968144 None:intergenic 20.0%
!!! AAAACTTTCAATTTTTAGTC+CGG + Chr5:8965960-8965979 None:intergenic 20.0%
!!! AATTTAAAGATTTTTCTGGA+TGG - Chr5:8969193-8969212 MsG0580024733.01.T01:CDS 20.0%
!!! AGTTTTTTCTGTTAGTTATT+TGG + Chr5:8966176-8966195 None:intergenic 20.0%
!!! ATACGTGTTTACATTTTTAA+CGG - Chr5:8965454-8965473 MsG0580024733.01.T01:CDS 20.0%
!!! CACTCATTAAATTTTCATTA+TGG - Chr5:8968478-8968497 MsG0580024733.01.T01:intron 20.0%
!!! CCTTCATACAATTTTTAAAA+AGG + Chr5:8967564-8967583 None:intergenic 20.0%
!!! CCTTTTTAAAAATTGTATGA+AGG - Chr5:8967561-8967580 MsG0580024733.01.T01:intron 20.0%
!!! CGATTTTTTTATGTTATTTG+AGG - Chr5:8966435-8966454 MsG0580024733.01.T01:intron 20.0%
!!! CTTAAATTAACTTTTGTTGA+TGG + Chr5:8965894-8965913 None:intergenic 20.0%
!!! TATTCTGTTTTTTTTACTCT+CGG + Chr5:8964759-8964778 None:intergenic 20.0%
!!! TCATAATCATTTTTTGTAAC+TGG + Chr5:8967692-8967711 None:intergenic 20.0%
!!! TCTACTTTTTTTTCTAAATC+AGG + Chr5:8968372-8968391 None:intergenic 20.0%
!!! TCTTCATTTATCTCTTTTTT+GGG + Chr5:8964799-8964818 None:intergenic 20.0%
!!! TGAAAAATTGATTCAATGAA+AGG + Chr5:8963202-8963221 None:intergenic 20.0%
!!! TTCTTCATTTATCTCTTTTT+TGG + Chr5:8964800-8964819 None:intergenic 20.0%
!!! TTTTATGTTATTTGAGGATA+AGG - Chr5:8966441-8966460 MsG0580024733.01.T01:intron 20.0%
!!! TTTTTTTGAAATATTGGTAG+GGG - Chr5:8964189-8964208 MsG0580024733.01.T01:CDS 20.0%
! AAAAGGAAGACGTTTAAAAA+CGG + Chr5:8963143-8963162 None:intergenic 25.0%
! AAAGATAACAGAATGTACAA+TGG + Chr5:8968403-8968422 None:intergenic 25.0%
! AAATTAACAATCTATGGGAT+TGG + Chr5:8962963-8962982 None:intergenic 25.0%
! AATCAAAGTAACTAGAAAAG+TGG + Chr5:8965622-8965641 None:intergenic 25.0%
! AATTAACAATCTATGGGATT+GGG + Chr5:8962962-8962981 None:intergenic 25.0%
! AATTAGTTAGTTAATTCCCT+TGG - Chr5:8964219-8964238 MsG0580024733.01.T01:CDS 25.0%
! AATTTGAAAATTGACGATGA+AGG - Chr5:8966983-8967002 MsG0580024733.01.T01:intron 25.0%
! AGTGTGTTAATTCAATGTAT+AGG - Chr5:8964334-8964353 MsG0580024733.01.T01:intron 25.0%
! ATCCATTAACAATTATCAAC+TGG - Chr5:8968722-8968741 MsG0580024733.01.T01:intron 25.0%
! CATAAAATTCCTGCATAAAA+TGG + Chr5:8967957-8967976 None:intergenic 25.0%
! CTACTTTCTTCCTTATTATT+TGG + Chr5:8965596-8965615 None:intergenic 25.0%
! GAGTAAAAAAAACAGAATAC+AGG - Chr5:8964760-8964779 MsG0580024733.01.T01:intron 25.0%
! TAAACATCAAGACAAAAAAC+TGG - Chr5:8966758-8966777 MsG0580024733.01.T01:intron 25.0%
! TAAAGCTTGAAAAACAGAAA+GGG + Chr5:8965673-8965692 None:intergenic 25.0%
! TAAATATGACAAAACGGATA+AGG - Chr5:8964720-8964739 MsG0580024733.01.T01:intron 25.0%
! TACACTGTACTATTATAGTA+TGG - Chr5:8965770-8965789 MsG0580024733.01.T01:intron 25.0%
! TATTTGCTTCATTGTATGTT+TGG - Chr5:8963614-8963633 MsG0580024733.01.T01:intron 25.0%
! TCCATTAACAATTATCAACT+GGG - Chr5:8968723-8968742 MsG0580024733.01.T01:intron 25.0%
! TGCAAAATATTGTAATCCTA+AGG + Chr5:8968534-8968553 None:intergenic 25.0%
! TGTAATGAAGGATTATACAT+AGG - Chr5:8965641-8965660 MsG0580024733.01.T01:CDS 25.0%
! TTAAACTCAATGCTGTAATA+AGG + Chr5:8965254-8965273 None:intergenic 25.0%
! TTAAAGCTTGAAAAACAGAA+AGG + Chr5:8965674-8965693 None:intergenic 25.0%
! TTAATCAATCGTAATAATGG+TGG - Chr5:8964443-8964462 MsG0580024733.01.T01:CDS 25.0%
! TTAATGAAGTTCTCAATTTC+AGG - Chr5:8967607-8967626 MsG0580024733.01.T01:intron 25.0%
! TTAGTTATTTGGTATAGAGT+CGG + Chr5:8966165-8966184 None:intergenic 25.0%
! TTATCAATAGAGTGCATATT+TGG + Chr5:8963745-8963764 None:intergenic 25.0%
! TTGCAGAGTTTATGTAAATA+AGG - Chr5:8963449-8963468 MsG0580024733.01.T01:CDS 25.0%
!! AACTTCAAACATACAGTTTT+TGG - Chr5:8968160-8968179 MsG0580024733.01.T01:intron 25.0%
!! ACTCTATTGATAATAACTTG+TGG - Chr5:8963752-8963771 MsG0580024733.01.T01:intron 25.0%
!! AGAAATTAAAAGTATGCCAA+GGG + Chr5:8964238-8964257 None:intergenic 25.0%
!! AGTTACTTTGATTGTAATGA+AGG - Chr5:8965629-8965648 MsG0580024733.01.T01:CDS 25.0%
!! CTAAATCAGGTCTAAATTTT+TGG + Chr5:8968359-8968378 None:intergenic 25.0%
!! GGTGAATTTAAAGATTTTTC+TGG - Chr5:8969189-8969208 MsG0580024733.01.T01:CDS 25.0%
!! TACGTGTTTACATTTTTAAC+GGG - Chr5:8965455-8965474 MsG0580024733.01.T01:CDS 25.0%
!!! ATCATTTTTGTGCATTCTTT+TGG - Chr5:8963915-8963934 MsG0580024733.01.T01:intron 25.0%
!!! CATATATTCATTTAGTTTGC+TGG - Chr5:8966505-8966524 MsG0580024733.01.T01:intron 25.0%
!!! CTCCTAATTTAATTTGTAGA+TGG - Chr5:8966690-8966709 MsG0580024733.01.T01:intron 25.0%
!!! GTTTTTGTTGATTATTACTG+TGG + Chr5:8963019-8963038 None:intergenic 25.0%
!!! TAGGTCAAAAAGAAGTATTT+AGG + Chr5:8967501-8967520 None:intergenic 25.0%
!!! TAGTTGTTTTAACATTGATC+AGG - Chr5:8964409-8964428 MsG0580024733.01.T01:CDS 25.0%
!!! TTTGTTCTTTGAGATTTCAT+GGG - Chr5:8966357-8966376 MsG0580024733.01.T01:intron 25.0%
!!! TTTTGTTCTTTGAGATTTCA+TGG - Chr5:8966356-8966375 MsG0580024733.01.T01:intron 25.0%
AAAAAAACAGAATACAGGAC+AGG - Chr5:8964765-8964784 MsG0580024733.01.T01:intron 30.0%
AAAAAACAGAATACAGGACA+GGG - Chr5:8964766-8964785 MsG0580024733.01.T01:intron 30.0%
AAACAAATGCTTAAAGAGCT+TGG - Chr5:8967184-8967203 MsG0580024733.01.T01:intron 30.0%
AAACACGTATTTGCATGATA+AGG + Chr5:8965444-8965463 None:intergenic 30.0%
AAAGGAAATGACTAAGATAC+TGG - Chr5:8964819-8964838 MsG0580024733.01.T01:CDS 30.0%
AAATGCGAACCAAAGAATAA+GGG + Chr5:8968989-8969008 None:intergenic 30.0%
AACACGTATTTGCATGATAA+GGG + Chr5:8965443-8965462 None:intergenic 30.0%
AACTGACCTGAATTGTTATA+AGG + Chr5:8966822-8966841 None:intergenic 30.0%
AAGAATTTCGTTAGAAAGTG+AGG + Chr5:8965363-8965382 None:intergenic 30.0%
AAGGAAATGACTAAGATACT+GGG - Chr5:8964820-8964839 MsG0580024733.01.T01:CDS 30.0%
AATTTAATGAGTGAAACCCA+AGG + Chr5:8968471-8968490 None:intergenic 30.0%
ACTGTACTATTATAGTATGG+AGG - Chr5:8965773-8965792 MsG0580024733.01.T01:intron 30.0%
AGAAAAGAAAGTCATTCTTC+AGG + Chr5:8964383-8964402 None:intergenic 30.0%
AGCCTATAACATAAACATGT+CGG - Chr5:8967153-8967172 MsG0580024733.01.T01:intron 30.0%
ATCAACAAAAACCCTAACAA+TGG - Chr5:8963027-8963046 MsG0580024733.01.T01:three_prime_UTR 30.0%
ATCATTTGCATTCTTCTCTT+TGG + Chr5:8968883-8968902 None:intergenic 30.0%
ATGAAATTAGACGTTACCTT+TGG - Chr5:8965147-8965166 MsG0580024733.01.T01:intron 30.0%
ATGATGTAGAAGTAAAAGAC+CGG + Chr5:8967664-8967683 None:intergenic 30.0%
ATTTAACAACAATGCTTGCT+GGG - Chr5:8968678-8968697 MsG0580024733.01.T01:intron 30.0%
GACAGAAATCTTGATCTATT+CGG + Chr5:8962833-8962852 None:intergenic 30.0%
GACATACAACTTATTCAGAT+TGG + Chr5:8963576-8963595 None:intergenic 30.0%
GAGTTAAGTTCATCCTTAAA+AGG + Chr5:8968037-8968056 None:intergenic 30.0%
GCTGCTAATAAAGATACTTA+TGG + Chr5:8964656-8964675 None:intergenic 30.0%
GGAAAATTTAAATATCTGGC+AGG + Chr5:8969444-8969463 None:intergenic 30.0%
GGGTGGCTATAATAAAAATA+TGG - Chr5:8964548-8964567 MsG0580024733.01.T01:CDS 30.0%
GTAAAATAACAAGACCACAA+CGG + Chr5:8969412-8969431 None:intergenic 30.0%
GTATATGTAGTATTGCCTAT+TGG - Chr5:8964048-8964067 MsG0580024733.01.T01:CDS 30.0%
GTGTACAATGATTTAAGGAT+TGG - Chr5:8965729-8965748 MsG0580024733.01.T01:intron 30.0%
GTTCTTAACCAAAACTGAAT+GGG - Chr5:8963078-8963097 MsG0580024733.01.T01:CDS 30.0%
TAGAACAGTATTAGAATCCT+AGG + Chr5:8965937-8965956 None:intergenic 30.0%
TAGTTGTTGTGTTTGTCAAA+TGG - Chr5:8964089-8964108 MsG0580024733.01.T01:CDS 30.0%
TATGCATGAGATGTATCAAT+AGG + Chr5:8967524-8967543 None:intergenic 30.0%
TATGTATGTTTGTGGGAAAT+AGG - Chr5:8966723-8966742 MsG0580024733.01.T01:intron 30.0%
TATTTAACAACAATGCTTGC+TGG - Chr5:8968677-8968696 MsG0580024733.01.T01:intron 30.0%
TCAACAAAAACCCTAACAAT+GGG - Chr5:8963028-8963047 MsG0580024733.01.T01:three_prime_UTR 30.0%
TGAGCAACAGTTACATATAT+TGG + Chr5:8966234-8966253 None:intergenic 30.0%
TGGCGGAAAATTTAAATATC+TGG + Chr5:8969448-8969467 None:intergenic 30.0%
TGTGAACGTGGATATTATAA+CGG - Chr5:8967839-8967858 MsG0580024733.01.T01:intron 30.0%
TGTTCTTAACCAAAACTGAA+TGG - Chr5:8963077-8963096 MsG0580024733.01.T01:CDS 30.0%
TTAACGCGAAAGAAACAAAA+TGG - Chr5:8966051-8966070 MsG0580024733.01.T01:intron 30.0%
TTAATTTAAGCGGCATGTTT+GGG - Chr5:8965904-8965923 MsG0580024733.01.T01:intron 30.0%
TTATAACAATTCAGGTCAGT+TGG - Chr5:8966821-8966840 MsG0580024733.01.T01:intron 30.0%
TTCTCTTTCAGCTTAACTAT+TGG - Chr5:8966079-8966098 MsG0580024733.01.T01:intron 30.0%
TTGATTCAATGAAAGGATGA+AGG + Chr5:8963195-8963214 None:intergenic 30.0%
TTTGACAAAATACCATGTGA+TGG + Chr5:8965201-8965220 None:intergenic 30.0%
TTTGACAAACACAACAACTA+TGG + Chr5:8964089-8964108 None:intergenic 30.0%
! AACTATGGTCTAAACCATTT+TGG + Chr5:8964074-8964093 None:intergenic 30.0%
! AACTTGTGGTTTTCAACTTT+TGG - Chr5:8963766-8963785 MsG0580024733.01.T01:intron 30.0%
! AATAGAATCATTTTGTCTCG+AGG - Chr5:8969373-8969392 MsG0580024733.01.T01:five_prime_UTR 30.0%
! ACAGCATTGAGTTTAATACA+TGG - Chr5:8965258-8965277 MsG0580024733.01.T01:intron 30.0%
! ACATTCTGTTATCTTTTGCA+CGG - Chr5:8968407-8968426 MsG0580024733.01.T01:CDS 30.0%
! ACTTGTGGTTTTCAACTTTT+GGG - Chr5:8963767-8963786 MsG0580024733.01.T01:intron 30.0%
! AGGAATTTTATGATACAAGG+TGG - Chr5:8967965-8967984 MsG0580024733.01.T01:intron 30.0%
! ATTTGTGAACATTGAGGTTT+TGG - Chr5:8968559-8968578 MsG0580024733.01.T01:intron 30.0%
! CAGAAATTAAAAGTATGCCA+AGG + Chr5:8964239-8964258 None:intergenic 30.0%
! TCATTGTATGTTTGGAATCA+CGG - Chr5:8963622-8963641 MsG0580024733.01.T01:intron 30.0%
! TCTTATAGTCCATTTTATGC+AGG - Chr5:8967945-8967964 MsG0580024733.01.T01:intron 30.0%
! TGCAGGAATTTTATGATACA+AGG - Chr5:8967962-8967981 MsG0580024733.01.T01:intron 30.0%
! TTTGTTGATTATTACTGTGG+TGG + Chr5:8963016-8963035 None:intergenic 30.0%
!! AATTAGGAGTGTTAACACTA+AGG + Chr5:8966679-8966698 None:intergenic 30.0%
!! ACATTTGTTTTCTTTGGCTT+TGG - Chr5:8965522-8965541 MsG0580024733.01.T01:intron 30.0%
!! GGTAACACATTTGTTTTCTT+TGG - Chr5:8965516-8965535 MsG0580024733.01.T01:CDS 30.0%
!! GTAGTTCTGAGTAAAGAAAA+CGG + Chr5:8967114-8967133 None:intergenic 30.0%
!! TTATTTATTCTTTGGCTTGC+AGG - Chr5:8968779-8968798 MsG0580024733.01.T01:intron 30.0%
!! TTCAAACATACAGTTTTTGG+AGG - Chr5:8968163-8968182 MsG0580024733.01.T01:intron 30.0%
!!! AAAGATATGCGGTTTTTTGT+TGG - Chr5:8965004-8965023 MsG0580024733.01.T01:CDS 30.0%
!!! AGTCATTCTTCAGGTTTTTT+AGG + Chr5:8964374-8964393 None:intergenic 30.0%
!!! CAGTTTTGGTTAAGAACATT+CGG + Chr5:8963075-8963094 None:intergenic 30.0%
!!! CTTGGCATACTTTTAATTTC+TGG - Chr5:8964237-8964256 MsG0580024733.01.T01:CDS 30.0%
!!! GTCATTCTTCAGGTTTTTTA+GGG + Chr5:8964373-8964392 None:intergenic 30.0%
!!! GTTTTTTGTTGGCATTTCAT+AGG - Chr5:8965015-8965034 MsG0580024733.01.T01:CDS 30.0%
!!! TCATTCTTCAGGTTTTTTAG+GGG + Chr5:8964372-8964391 None:intergenic 30.0%
!!! TTGCTTTTCATAGAAGCATT+AGG - Chr5:8967864-8967883 MsG0580024733.01.T01:intron 30.0%
AAAACCAGAAAAAGAGAGAG+TGG + Chr5:8968303-8968322 None:intergenic 35.0%
AAAATACCATGTGATGGCTA+TGG + Chr5:8965195-8965214 None:intergenic 35.0%
AAACCAGAAAAAGAGAGAGT+GGG + Chr5:8968302-8968321 None:intergenic 35.0%
AACTCAATGCTGTAATAAGG+TGG + Chr5:8965251-8965270 None:intergenic 35.0%
AAGATACTGGGCAAATAATC+AGG - Chr5:8964832-8964851 MsG0580024733.01.T01:CDS 35.0%
AAGATTCTGTACCACTGTAT+TGG - Chr5:8965806-8965825 MsG0580024733.01.T01:intron 35.0%
AATATTGTAATCCTAAGGCC+TGG + Chr5:8968529-8968548 None:intergenic 35.0%
ACACGTATTTGCATGATAAG+GGG + Chr5:8965442-8965461 None:intergenic 35.0%
AGAAAATATGGATGAGTTGC+AGG + Chr5:8967019-8967038 None:intergenic 35.0%
AGAGTGAGAACAAAGATATG+CGG - Chr5:8964993-8965012 MsG0580024733.01.T01:CDS 35.0%
AGAGTGCATATTTGGATTGA+CGG + Chr5:8963737-8963756 None:intergenic 35.0%
AGATACTGGGCAAATAATCA+GGG - Chr5:8964833-8964852 MsG0580024733.01.T01:CDS 35.0%
ATTAATTTACGACTCACCAG+AGG + Chr5:8968253-8968272 None:intergenic 35.0%
ATTAGAATGTGAGGGTCTTT+AGG - Chr5:8965548-8965567 MsG0580024733.01.T01:intron 35.0%
ATTGACTACACTAGCAACAA+TGG - Chr5:8968198-8968217 MsG0580024733.01.T01:intron 35.0%
CAACAAAAACCCTAACAATG+GGG - Chr5:8963029-8963048 MsG0580024733.01.T01:three_prime_UTR 35.0%
CATCAAGACAAAAAACTGGA+AGG - Chr5:8966762-8966781 MsG0580024733.01.T01:intron 35.0%
CATGAGATGTATCAATAGGT+AGG + Chr5:8967520-8967539 None:intergenic 35.0%
CATGATTGAGTTCATTGCTT+AGG - Chr5:8963958-8963977 MsG0580024733.01.T01:intron 35.0%
CCATTATGTTTGGCAGAATA+AGG + Chr5:8964295-8964314 None:intergenic 35.0%
CCTTATTCTGCCAAACATAA+TGG - Chr5:8964292-8964311 MsG0580024733.01.T01:CDS 35.0%
CGAATGAGATGATAGAATGT+GGG - Chr5:8964901-8964920 MsG0580024733.01.T01:CDS 35.0%
CTTGAACCTTTGATCATGAT+CGG - Chr5:8964934-8964953 MsG0580024733.01.T01:CDS 35.0%
GAAATGCGAACCAAAGAATA+AGG + Chr5:8968990-8969009 None:intergenic 35.0%
GACATGTTTATGTTATAGGC+TGG + Chr5:8967154-8967173 None:intergenic 35.0%
GAGAAGAATCCAAAGAAGAA+GGG - Chr5:8967725-8967744 MsG0580024733.01.T01:intron 35.0%
GAGTTCTTGTGAAAAGTTAG+TGG + Chr5:8963874-8963893 None:intergenic 35.0%
GATCAGTAGCTCAGAAAATA+TGG + Chr5:8967031-8967050 None:intergenic 35.0%
GATGTTCTACGGTGTATTAT+TGG + Chr5:8962907-8962926 None:intergenic 35.0%
GCATGGTGTACAATGATTTA+AGG - Chr5:8965724-8965743 MsG0580024733.01.T01:intron 35.0%
GCCATGTAATTAACCACTAT+AGG - Chr5:8969464-8969483 MsG0580024733.01.T01:five_prime_UTR 35.0%
GCCTATAACATAAACATGTC+GGG - Chr5:8967154-8967173 MsG0580024733.01.T01:intron 35.0%
GGATGACCTTATAACAATTC+AGG - Chr5:8966813-8966832 MsG0580024733.01.T01:intron 35.0%
GGATTCTAATACTGTTCTAC+CGG - Chr5:8965938-8965957 MsG0580024733.01.T01:intron 35.0%
GTAACGTCTAATTTCATAGC+AGG + Chr5:8965144-8965163 None:intergenic 35.0%
GTACAAACTGGAAACTCAAA+CGG + Chr5:8963270-8963289 None:intergenic 35.0%
GTCACTCTTGATTTACTACA+AGG + Chr5:8967915-8967934 None:intergenic 35.0%
GTGAACTAACCCTTATTCTT+TGG - Chr5:8968977-8968996 MsG0580024733.01.T01:CDS 35.0%
GTTAAAAGTCGTTACACTAC+TGG - Chr5:8967629-8967648 MsG0580024733.01.T01:intron 35.0%
GTTAATTTAAGCGGCATGTT+TGG - Chr5:8965903-8965922 MsG0580024733.01.T01:intron 35.0%
TACACTAGCAACAATGGAAA+AGG - Chr5:8968204-8968223 MsG0580024733.01.T01:intron 35.0%
TAGAGGTGGTGAATCAATTT+GGG - Chr5:8968006-8968025 MsG0580024733.01.T01:intron 35.0%
TATGCTTAGTTGACCAGTTT+CGG + Chr5:8966326-8966345 None:intergenic 35.0%
TATGGTAAACATCCTGTTAC+TGG - Chr5:8963820-8963839 MsG0580024733.01.T01:intron 35.0%
TCCCGACATGTTTATGTTAT+AGG + Chr5:8967158-8967177 None:intergenic 35.0%
TGAGAAGAATCCAAAGAAGA+AGG - Chr5:8967724-8967743 MsG0580024733.01.T01:intron 35.0%
TGATATAGGGAGATGTTCTA+CGG + Chr5:8962918-8962937 None:intergenic 35.0%
TGATGTAGAAGTAAAAGACC+GGG + Chr5:8967663-8967682 None:intergenic 35.0%
TGGAAGACGTTGATCATAAT+AGG - Chr5:8965305-8965324 MsG0580024733.01.T01:CDS 35.0%
TGTACATATCCCTTCTTCTT+TGG + Chr5:8967737-8967756 None:intergenic 35.0%
TGTCACACACCCAAATAATA+AGG - Chr5:8965583-8965602 MsG0580024733.01.T01:intron 35.0%
TTGGCAAATACTTGAAAGCT+AGG - Chr5:8969088-8969107 MsG0580024733.01.T01:intron 35.0%
! AAAAACGGTGCGATTTTCTT+TGG + Chr5:8963128-8963147 None:intergenic 35.0%
! AATTTGGGGAAAGCCTTTTA+AGG - Chr5:8968021-8968040 MsG0580024733.01.T01:intron 35.0%
! ACTGCATAAGCTTTGTCAAA+TGG - Chr5:8965493-8965512 MsG0580024733.01.T01:CDS 35.0%
! ACTGTCATTTGTGAACATTG+AGG - Chr5:8968553-8968572 MsG0580024733.01.T01:intron 35.0%
! ACTTTTCACAAGAACTCAGA+AGG - Chr5:8963877-8963896 MsG0580024733.01.T01:intron 35.0%
! CTGCATAAGCTTTGTCAAAT+GGG - Chr5:8965494-8965513 MsG0580024733.01.T01:CDS 35.0%
! GGGATGCATTTATGATTTTC+TGG - Chr5:8966471-8966490 MsG0580024733.01.T01:intron 35.0%
! GTGAAAACTTTGTTTAGCAC+TGG + Chr5:8966584-8966603 None:intergenic 35.0%
! TATTCTTTGGTTCGCATTTC+AGG - Chr5:8968990-8969009 MsG0580024733.01.T01:CDS 35.0%
! TGCATAAGCTTTGTCAAATG+GGG - Chr5:8965495-8965514 MsG0580024733.01.T01:CDS 35.0%
! TGGAAAGGCACAAAAAGAAA+GGG - Chr5:8967249-8967268 MsG0580024733.01.T01:intron 35.0%
! TGTTATTTGAGGATAAGGTG+TGG - Chr5:8966446-8966465 MsG0580024733.01.T01:intron 35.0%
! TTTTCTCTTCTTTCCCACAA+CGG + Chr5:8969157-8969176 None:intergenic 35.0%
!! AGCAGTTTTATCACTTGATG+AGG + Chr5:8967416-8967435 None:intergenic 35.0%
!! ATCGTAATAATGGTGGATGA+TGG - Chr5:8964450-8964469 MsG0580024733.01.T01:CDS 35.0%
!! ATGGTGTTGTTTGTTCTATG+TGG - Chr5:8965333-8965352 MsG0580024733.01.T01:CDS 35.0%
!! GCCCAGTTGATAATTGTTAA+TGG + Chr5:8968727-8968746 None:intergenic 35.0%
!! GCGTTAACTTGTAAGAATTC+AGG + Chr5:8966038-8966057 None:intergenic 35.0%
!! TCGTAATAATGGTGGATGAT+GGG - Chr5:8964451-8964470 MsG0580024733.01.T01:CDS 35.0%
!! TCTAAACCATTTTGGCCAAT+AGG + Chr5:8964066-8964085 None:intergenic 35.0%
!! TTTGGTGGATTAGAATGTGA+GGG - Chr5:8965540-8965559 MsG0580024733.01.T01:intron 35.0%
!!! CATTCTTCAGGTTTTTTAGG+GGG + Chr5:8964371-8964390 None:intergenic 35.0%
!!! GTGGTGGATTTTCTTACTTT+CGG + Chr5:8963000-8963019 None:intergenic 35.0%
!!! TTTGTTTTCTTTGGCTTTGG+TGG - Chr5:8965525-8965544 MsG0580024733.01.T01:intron 35.0%
AAAGGAAACTGCATTGCATG+GGG - Chr5:8967219-8967238 MsG0580024733.01.T01:intron 40.0%
AAATCCCAGACTTAGGCTAT+AGG + Chr5:8965837-8965856 None:intergenic 40.0%
AACCAGAAAAAGAGAGAGTG+GGG + Chr5:8968301-8968320 None:intergenic 40.0%
AACTCCAAATTAGTCCACTC+TGG - Chr5:8968052-8968071 MsG0580024733.01.T01:intron 40.0%
AACTGGGAACCATTAGTATG+TGG + Chr5:8968109-8968128 None:intergenic 40.0%
AAGAGAAAAGCAGTTGTCAG+TGG - Chr5:8969168-8969187 MsG0580024733.01.T01:CDS 40.0%
ACTGGGAACCATTAGTATGT+GGG + Chr5:8968108-8968127 None:intergenic 40.0%
AGAGGTGGTGAATCAATTTG+GGG - Chr5:8968007-8968026 MsG0580024733.01.T01:intron 40.0%
AGTGTTAACACTAAGGATCC+TGG + Chr5:8966672-8966691 None:intergenic 40.0%
ATGTCTCCGATCATGATCAA+AGG + Chr5:8964943-8964962 None:intergenic 40.0%
ATTGTGGCAGTCAAAACTAC+TGG - Chr5:8966617-8966636 MsG0580024733.01.T01:intron 40.0%
ATTTAGCGACTCTTTCCACT+AGG - Chr5:8965101-8965120 MsG0580024733.01.T01:CDS 40.0%
ATTTGAGGATAAGGTGTGGA+TGG - Chr5:8966450-8966469 MsG0580024733.01.T01:intron 40.0%
CAAAATCCAGAAGAACCTTC+TGG + Chr5:8966949-8966968 None:intergenic 40.0%
CACATACACAAGCATCAACA+TGG + Chr5:8966899-8966918 None:intergenic 40.0%
CACCCAAAAAAACCTCCATA+CGG - Chr5:8962858-8962877 MsG0580024733.01.T01:three_prime_UTR 40.0%
CACTGAATTTACCCACATTG+TGG - Chr5:8966601-8966620 MsG0580024733.01.T01:intron 40.0%
CAGGAGGAAATCAAGATAAC+AGG - Chr5:8968798-8968817 MsG0580024733.01.T01:intron 40.0%
CATGCTGTCAACACAAAGAA+TGG - Chr5:8968747-8968766 MsG0580024733.01.T01:intron 40.0%
CTACAAGGACAAAGACACAA+AGG + Chr5:8967900-8967919 None:intergenic 40.0%
CTGAAACAAATCCCAGACTT+AGG + Chr5:8965844-8965863 None:intergenic 40.0%
GAAAGGAAACTGCATTGCAT+GGG - Chr5:8967218-8967237 MsG0580024733.01.T01:intron 40.0%
GCGAATGAGATGATAGAATG+TGG - Chr5:8964900-8964919 MsG0580024733.01.T01:CDS 40.0%
GTACAACTGCATACAACACA+CGG - Chr5:8967752-8967771 MsG0580024733.01.T01:intron 40.0%
GTAGAGGTGGTGAATCAATT+TGG - Chr5:8968005-8968024 MsG0580024733.01.T01:intron 40.0%
GTATTGCCTATTGGCCAAAA+TGG - Chr5:8964057-8964076 MsG0580024733.01.T01:CDS 40.0%
TAGTTCACATACCTAGCGTT+GGG - Chr5:8966106-8966125 MsG0580024733.01.T01:intron 40.0%
TATGTTGCTACGGCAGATTT+AGG + Chr5:8964489-8964508 None:intergenic 40.0%
TCATTCGCATAGATCGTAAC+TGG + Chr5:8964888-8964907 None:intergenic 40.0%
TCATTGAATGCAAAAGCTCG+AGG - Chr5:8964268-8964287 MsG0580024733.01.T01:CDS 40.0%
TCCCTATATCAGAAAATCGC+CGG - Chr5:8962927-8962946 MsG0580024733.01.T01:three_prime_UTR 40.0%
TCCTGCAGAGTAACAAAGAA+AGG + Chr5:8966549-8966568 None:intergenic 40.0%
TGAGTTTCCAGTTTGTACAC+CGG - Chr5:8963272-8963291 MsG0580024733.01.T01:intron 40.0%
TGCAGCACATTATACTACCT+TGG - Chr5:8965223-8965242 MsG0580024733.01.T01:intron 40.0%
TGGAAATGTCTTCTGCTATG+AGG - Chr5:8966637-8966656 MsG0580024733.01.T01:intron 40.0%
TTGCTTCTTCCCCATTGTTA+GGG + Chr5:8963041-8963060 None:intergenic 40.0%
TTGGAATCACGGTGAGTATA+AGG - Chr5:8963633-8963652 MsG0580024733.01.T01:intron 40.0%
TTGGACTATCTTGAGTACAG+TGG - Chr5:8968578-8968597 MsG0580024733.01.T01:intron 40.0%
TTGTGATCGTGCAGCTAAAA+TGG + Chr5:8967290-8967309 None:intergenic 40.0%
TTTGAGGATAAGGTGTGGAT+GGG - Chr5:8966451-8966470 MsG0580024733.01.T01:intron 40.0%
TTTGATCATGATCGGAGACA+TGG - Chr5:8964942-8964961 MsG0580024733.01.T01:CDS 40.0%
! AAATTAGTCCACTCTGGAAG+GGG - Chr5:8968058-8968077 MsG0580024733.01.T01:intron 40.0%
! AATGAGATCTTGCTGCTTCA+AGG + Chr5:8963851-8963870 None:intergenic 40.0%
! ATGAGATCTTGCTGCTTCAA+GGG + Chr5:8963850-8963869 None:intergenic 40.0%
! CAAATTAGTCCACTCTGGAA+GGG - Chr5:8968057-8968076 MsG0580024733.01.T01:intron 40.0%
! CATTCTTTGTGTTGACAGCA+TGG + Chr5:8968749-8968768 None:intergenic 40.0%
! CTAAGTCTGGGATTTGTTTC+AGG - Chr5:8965842-8965861 MsG0580024733.01.T01:intron 40.0%
! GTGGAAAGGCACAAAAAGAA+AGG - Chr5:8967248-8967267 MsG0580024733.01.T01:intron 40.0%
!! CTTTGGTGGATTAGAATGTG+AGG - Chr5:8965539-8965558 MsG0580024733.01.T01:intron 40.0%
!! GCTATGAGGTTTGTTTTTCC+AGG - Chr5:8966651-8966670 MsG0580024733.01.T01:intron 40.0%
!! GTGCAGTGAATTTTAGCACA+TGG - Chr5:8965285-8965304 MsG0580024733.01.T01:CDS 40.0%
!! TTGTACACCATGCTGATTCT+CGG + Chr5:8965717-8965736 None:intergenic 40.0%
!! TTTATTCTTTGGCTTGCAGG+AGG - Chr5:8968782-8968801 MsG0580024733.01.T01:intron 40.0%
!!! AGTTTTGACTGCCACAATGT+GGG + Chr5:8966615-8966634 None:intergenic 40.0%
!!! GGTTTTCAACTTTTGGGTTC+AGG - Chr5:8963773-8963792 MsG0580024733.01.T01:intron 40.0%
!!! TAGTTTTGACTGCCACAATG+TGG + Chr5:8966616-8966635 None:intergenic 40.0%
AAACTGAATGGGCAACCGAA+TGG - Chr5:8963089-8963108 MsG0580024733.01.T01:CDS 45.0%
AAAGAGCTTGGAACTGAGCA+AGG - Chr5:8967196-8967215 MsG0580024733.01.T01:intron 45.0%
AACAGTGGCCCACATACTAA+TGG - Chr5:8968097-8968116 MsG0580024733.01.T01:intron 45.0%
AACCACTGAACAACGGGTAA+GGG - Chr5:8964681-8964700 MsG0580024733.01.T01:intron 45.0%
AACCAGCTAGACAGATGCAA+AGG + Chr5:8968444-8968463 None:intergenic 45.0%
AACTGAATGGGCAACCGAAT+GGG - Chr5:8963090-8963109 MsG0580024733.01.T01:CDS 45.0%
AAGGAAACTGCATTGCATGG+GGG - Chr5:8967220-8967239 MsG0580024733.01.T01:intron 45.0%
ACCAGAAAAAGAGAGAGTGG+GGG + Chr5:8968300-8968319 None:intergenic 45.0%
ACCTTCTGGTCAAGTGCATT+AGG + Chr5:8966935-8966954 None:intergenic 45.0%
ACTTGACCAGAAGGTTCTTC+TGG - Chr5:8966940-8966959 MsG0580024733.01.T01:intron 45.0%
AGAATAGCTATGCATGTGGC+TGG - Chr5:8967439-8967458 MsG0580024733.01.T01:intron 45.0%
AGCCACATGCATAGCTATTC+TGG + Chr5:8967440-8967459 None:intergenic 45.0%
ATTTACGACTCACCAGAGGT+CGG + Chr5:8968249-8968268 None:intergenic 45.0%
CAAGGACAAAGACACAAAGG+TGG + Chr5:8967897-8967916 None:intergenic 45.0%
CAATCTATGGGATTGGGTTC+CGG + Chr5:8962956-8962975 None:intergenic 45.0%
CATGTTTGGGAGAACTTCCT+AGG - Chr5:8965917-8965936 MsG0580024733.01.T01:intron 45.0%
CCAAAAAAACCTCCATACGG+CGG - Chr5:8962861-8962880 MsG0580024733.01.T01:three_prime_UTR 45.0%
CCAAATTAGTCCACTCTGGA+AGG - Chr5:8968056-8968075 MsG0580024733.01.T01:intron 45.0%
CTAGTTCACATACCTAGCGT+TGG - Chr5:8966105-8966124 MsG0580024733.01.T01:intron 45.0%
CTCACCATCTTTGCATTCAC+CGG + Chr5:8967475-8967494 None:intergenic 45.0%
CTTGAGGGAGGGTTTGTATA+TGG - Chr5:8966133-8966152 MsG0580024733.01.T01:intron 45.0%
GAAGATTCCAAATCGACCGA+TGG - Chr5:8967316-8967335 MsG0580024733.01.T01:intron 45.0%
GCATGTTATGCTGTAGCCTA+TGG - Chr5:8964517-8964536 MsG0580024733.01.T01:CDS 45.0%
GCCATGTCAGTATGTTGCTA+CGG + Chr5:8964499-8964518 None:intergenic 45.0%
GCCTTTCTTTGTTACTCTGC+AGG - Chr5:8966545-8966564 MsG0580024733.01.T01:intron 45.0%
GCTGAGATATTCTCCGAAAC+TGG - Chr5:8966310-8966329 MsG0580024733.01.T01:intron 45.0%
GCTGTAATAAGGTGGTACCA+AGG + Chr5:8965243-8965262 None:intergenic 45.0%
GGAAAGGAAACTGCATTGCA+TGG - Chr5:8967217-8967236 MsG0580024733.01.T01:intron 45.0%
GGATTTGTAACCTCCCCATT+CGG + Chr5:8963107-8963126 None:intergenic 45.0%
GGCTCATGGTATAGTAATCC+TGG - Chr5:8969021-8969040 MsG0580024733.01.T01:intron 45.0%
GTAGTTAGCATGGCAAACAG+TGG - Chr5:8968082-8968101 MsG0580024733.01.T01:intron 45.0%
GTTGCTTCTTCCCCATTGTT+AGG + Chr5:8963042-8963061 None:intergenic 45.0%
TAACAGTTCAGCAAGCCTAG+TGG + Chr5:8965119-8965138 None:intergenic 45.0%
TAATCCTAAGGCCTGGAACA+GGG + Chr5:8968522-8968541 None:intergenic 45.0%
TACCTTTGCATCTGTCTAGC+TGG - Chr5:8968439-8968458 MsG0580024733.01.T01:CDS 45.0%
TATAGGCAGCACCAATACAG+TGG + Chr5:8965820-8965839 None:intergenic 45.0%
TCCTAATGCACTTGACCAGA+AGG - Chr5:8966931-8966950 MsG0580024733.01.T01:intron 45.0%
TCGAGTGTAGTGTACTTGGT+AGG - Chr5:8964144-8964163 MsG0580024733.01.T01:CDS 45.0%
TCTACAATACTGAGTGCCTG+AGG + Chr5:8967346-8967365 None:intergenic 45.0%
TGCACTTCTTCCATGTACTG+CGG + Chr5:8967380-8967399 None:intergenic 45.0%
TGCCAGAATAGCTATGCATG+TGG - Chr5:8967435-8967454 MsG0580024733.01.T01:intron 45.0%
TGGTATAGTAATCCTGGAGC+TGG - Chr5:8969027-8969046 MsG0580024733.01.T01:intron 45.0%
TGTAGCCTATGGTGAAAGCA+GGG - Chr5:8964528-8964547 MsG0580024733.01.T01:CDS 45.0%
TTCATCACGCTTTGTGAACG+TGG - Chr5:8967827-8967846 MsG0580024733.01.T01:intron 45.0%
TTCGCATTTCAGGACAAGGT+TGG - Chr5:8969000-8969019 MsG0580024733.01.T01:CDS 45.0%
TTGAGCTTCGGATTGACGTA+GGG - Chr5:8963993-8964012 MsG0580024733.01.T01:intron 45.0%
TTGCATCTGTCTAGCTGGTT+TGG - Chr5:8968444-8968463 MsG0580024733.01.T01:CDS 45.0%
TTTCCAGTTTGTACACCGGA+TGG - Chr5:8963276-8963295 MsG0580024733.01.T01:intron 45.0%
! ACATCTGAATCTGGAGGTAC+AGG - Chr5:8969051-8969070 MsG0580024733.01.T01:intron 45.0%
! CTAGCGTTGGGAATTCTTGA+GGG - Chr5:8966118-8966137 MsG0580024733.01.T01:intron 45.0%
! GCCGGCGATTTTCTGATATA+GGG + Chr5:8962931-8962950 None:intergenic 45.0%
! GCTGGCTGCTTTGTATTGAA+TGG - Chr5:8966523-8966542 MsG0580024733.01.T01:intron 45.0%
! TGCAGTTGTGAGTTGAGCTT+CGG - Chr5:8963981-8964000 MsG0580024733.01.T01:intron 45.0%
! TGCCGGCGATTTTCTGATAT+AGG + Chr5:8962932-8962951 None:intergenic 45.0%
! TTCGGTTGCCCATTCAGTTT+TGG + Chr5:8963089-8963108 None:intergenic 45.0%
! TTGGTTCGCATTTCAGGACA+AGG - Chr5:8968996-8969015 MsG0580024733.01.T01:CDS 45.0%
!! ACAGTTTTTGGAGGCGTAGT+TGG - Chr5:8968172-8968191 MsG0580024733.01.T01:intron 45.0%
!! CCTTCCAGAGTGGACTAATT+TGG + Chr5:8968059-8968078 None:intergenic 45.0%
!!! CGCCGTATGGAGGTTTTTTT+GGG + Chr5:8962863-8962882 None:intergenic 45.0%
!!! CGTATGGAGGTTTTTTTGGG+TGG + Chr5:8962860-8962879 None:intergenic 45.0%
!!! CTTCAGGTTTTTTAGGGGGA+GGG + Chr5:8964367-8964386 None:intergenic 45.0%
!!! TCTTCAGGTTTTTTAGGGGG+AGG + Chr5:8964368-8964387 None:intergenic 45.0%
!!! TTTTGATTTGCACCGCCGTA+TGG + Chr5:8962876-8962895 None:intergenic 45.0%
!!! TTTTTTTTTTTTTGAAATAT+TGG - Chr5:8964183-8964202 MsG0580024733.01.T01:CDS 5.0%
ACCCGTTGTTCAGTGGTTCA+AGG + Chr5:8964679-8964698 None:intergenic 50.0%
ACGCACGCGCAGCAATAAAA+AGG + Chr5:8963160-8963179 None:intergenic 50.0%
ACTGAATGGGCAACCGAATG+GGG - Chr5:8963091-8963110 MsG0580024733.01.T01:CDS 50.0%
AGTCTGCATATCCCTGTTCC+AGG - Chr5:8968508-8968527 MsG0580024733.01.T01:intron 50.0%
ATACAAGGTGGCGATCCTAC+TGG - Chr5:8967977-8967996 MsG0580024733.01.T01:intron 50.0%
ATATCCCTGTTCCAGGCCTT+AGG - Chr5:8968515-8968534 MsG0580024733.01.T01:intron 50.0%
ATCAGAAAATCGCCGGCAAC+CGG - Chr5:8962934-8962953 MsG0580024733.01.T01:three_prime_UTR 50.0%
ATCCCTTACCCGTTGTTCAG+TGG + Chr5:8964686-8964705 None:intergenic 50.0%
ATGAAGTTCTCGCATGCCCT+GGG + Chr5:8967812-8967831 None:intergenic 50.0%
ATGTGATGGCTATGGCCTGA+CGG + Chr5:8965187-8965206 None:intergenic 50.0%
CAGGTCGAGTGTAGTGTACT+TGG - Chr5:8964140-8964159 MsG0580024733.01.T01:CDS 50.0%
CCCGTTGTTCAGTGGTTCAA+GGG + Chr5:8964678-8964697 None:intergenic 50.0%
CCCTTGAACCACTGAACAAC+GGG - Chr5:8964675-8964694 MsG0580024733.01.T01:intron 50.0%
CCTCAAGAATTCCCAACGCT+AGG + Chr5:8966120-8966139 None:intergenic 50.0%
CGGAGACATGGAAATGAGAG+TGG - Chr5:8964954-8964973 MsG0580024733.01.T01:CDS 50.0%
CGTTGGGAATTCTTGAGGGA+GGG - Chr5:8966122-8966141 MsG0580024733.01.T01:intron 50.0%
CTCTTCTTCCTCATCTGGCT+CGG + Chr5:8968850-8968869 None:intergenic 50.0%
CTGTAGCCTATGGTGAAAGC+AGG - Chr5:8964527-8964546 MsG0580024733.01.T01:CDS 50.0%
GAAAGCTAGGAATGCTCCAC+CGG - Chr5:8969101-8969120 MsG0580024733.01.T01:intron 50.0%
GAACCACTGAACAACGGGTA+AGG - Chr5:8964680-8964699 MsG0580024733.01.T01:intron 50.0%
GATTCAGATGTTCCAGCTCC+AGG + Chr5:8969042-8969061 None:intergenic 50.0%
GCCCTTGAACCACTGAACAA+CGG - Chr5:8964674-8964693 MsG0580024733.01.T01:intron 50.0%
GCCGTAGCAACATACTGACA+TGG - Chr5:8964495-8964514 MsG0580024733.01.T01:CDS 50.0%
GCTGCCTATAGCCTAAGTCT+GGG - Chr5:8965830-8965849 MsG0580024733.01.T01:intron 50.0%
GCTGGAACATCTGAATCTGG+AGG - Chr5:8969045-8969064 MsG0580024733.01.T01:intron 50.0%
GCTTGCTCTTCTTCCTCATC+TGG + Chr5:8968855-8968874 None:intergenic 50.0%
GCTTGGAACTGAGCAAGGAA+AGG - Chr5:8967201-8967220 MsG0580024733.01.T01:intron 50.0%
GGAGCTGGAACATCTGAATC+TGG - Chr5:8969042-8969061 MsG0580024733.01.T01:intron 50.0%
GTAATCCTAAGGCCTGGAAC+AGG + Chr5:8968523-8968542 None:intergenic 50.0%
GTTGAGCTTCGGATTGACGT+AGG - Chr5:8963992-8964011 MsG0580024733.01.T01:intron 50.0%
GTTGCACTCATGTTCCGTTG+TGG - Chr5:8969395-8969414 MsG0580024733.01.T01:five_prime_UTR 50.0%
TAAAATGGCAGCGAGTGCAG+CGG + Chr5:8967275-8967294 None:intergenic 50.0%
TAACTACACCCCTTCCAGAG+TGG + Chr5:8968069-8968088 None:intergenic 50.0%
TATGCATGTGGCTGGTGACA+GGG - Chr5:8967447-8967466 MsG0580024733.01.T01:intron 50.0%
TGAGCTTCGGATTGACGTAG+GGG - Chr5:8963994-8964013 MsG0580024733.01.T01:intron 50.0%
TGCTGCCTATAGCCTAAGTC+TGG - Chr5:8965829-8965848 MsG0580024733.01.T01:intron 50.0%
TGTCTCTCCGAGAATCAGCA+TGG - Chr5:8965707-8965726 MsG0580024733.01.T01:intron 50.0%
TTCAAGGGAGCTCCAGTAAC+AGG + Chr5:8963835-8963854 None:intergenic 50.0%
! ACCCCCACTCTCTCTTTTTC+TGG - Chr5:8968296-8968315 MsG0580024733.01.T01:intron 50.0%
! CCTAGCGTTGGGAATTCTTG+AGG - Chr5:8966117-8966136 MsG0580024733.01.T01:intron 50.0%
! GAATCTGGAGGTACAGGTGT+TGG - Chr5:8969057-8969076 MsG0580024733.01.T01:intron 50.0%
! TGGAAGGGGTGTAGTTAGCA+TGG - Chr5:8968072-8968091 MsG0580024733.01.T01:intron 50.0%
! TTCAGGACAAGGTTGGCTCA+TGG - Chr5:8969007-8969026 MsG0580024733.01.T01:CDS 50.0%
!! GATCCTACTGGTACTGGTAG+AGG - Chr5:8967989-8968008 MsG0580024733.01.T01:intron 50.0%
!! GTCTAGCTGGTTTGGACCTT+GGG - Chr5:8968452-8968471 MsG0580024733.01.T01:CDS 50.0%
!! GTTTTTGGAGGCGTAGTTGG+TGG - Chr5:8968175-8968194 MsG0580024733.01.T01:intron 50.0%
!! TGTCTAGCTGGTTTGGACCT+TGG - Chr5:8968451-8968470 MsG0580024733.01.T01:CDS 50.0%
!!! CCGCCGTATGGAGGTTTTTT+TGG + Chr5:8962864-8962883 None:intergenic 50.0%
ACATCGAAGACGCTGCCATC+CGG + Chr5:8963294-8963313 None:intergenic 55.0%
AGCCACCCTGCTTTCACCAT+AGG + Chr5:8964536-8964555 None:intergenic 55.0%
AGCCTATGGTGAAAGCAGGG+TGG - Chr5:8964531-8964550 MsG0580024733.01.T01:CDS 55.0%
AGGAGCTCCATCGGTCGATT+TGG + Chr5:8967326-8967345 None:intergenic 55.0%
ATGGCCTGACGGCTTTCACA+CGG + Chr5:8965176-8965195 None:intergenic 55.0%
CCACCTCTACCAGTACCAGT+AGG + Chr5:8967995-8968014 None:intergenic 55.0%
CTATGCATGTGGCTGGTGAC+AGG - Chr5:8967446-8967465 MsG0580024733.01.T01:intron 55.0%
CTGCCATCCGGTGTACAAAC+TGG + Chr5:8963282-8963301 None:intergenic 55.0%
GAAACTGCATTGCATGGGGG+AGG - Chr5:8967223-8967242 MsG0580024733.01.T01:intron 55.0%
GACACTGGTACAGCCGTTGT+GGG - Chr5:8969141-8969160 MsG0580024733.01.T01:CDS 55.0%
GATGAAGTTCTCGCATGCCC+TGG + Chr5:8967813-8967832 None:intergenic 55.0%
GCACTGTGATATAGCGCCCA+GGG - Chr5:8967793-8967812 MsG0580024733.01.T01:intron 55.0%
GCGTTGGGAATTCTTGAGGG+AGG - Chr5:8966121-8966140 MsG0580024733.01.T01:intron 55.0%
GGTCGGTCACTGTCATCAAC+AGG + Chr5:8968232-8968251 None:intergenic 55.0%
GTCAGGCCATAGCCATCACA+TGG - Chr5:8965186-8965205 MsG0580024733.01.T01:intron 55.0%
TCCTTACACCGAGCCAGATG+AGG - Chr5:8968839-8968858 MsG0580024733.01.T01:intron 55.0%
TGATGACAGTGACCGACCTC+TGG - Chr5:8968234-8968253 MsG0580024733.01.T01:intron 55.0%
TGCACTGTGATATAGCGCCC+AGG - Chr5:8967792-8967811 MsG0580024733.01.T01:intron 55.0%
! TGATTTGCACCGCCGTATGG+AGG + Chr5:8962873-8962892 None:intergenic 55.0%
!! CCTACTGGTACTGGTAGAGG+TGG - Chr5:8967992-8968011 MsG0580024733.01.T01:intron 55.0%
!! GGCACCGGTGAATGCAAAGA+TGG - Chr5:8967468-8967487 MsG0580024733.01.T01:intron 55.0%
!! TCCTCATCTGGCTCGGTGTA+AGG + Chr5:8968843-8968862 None:intergenic 55.0%
!! TCTGGAGGTACAGGTGTTGG+CGG - Chr5:8969060-8969079 MsG0580024733.01.T01:intron 55.0%
ACACTACTGGCGCTGCTTCC+CGG - Chr5:8967642-8967661 MsG0580024733.01.T01:intron 60.0%
ACTGCATTGCATGGGGGAGG+TGG - Chr5:8967226-8967245 MsG0580024733.01.T01:intron 60.0%
ATCGACCGATGGAGCTCCTC+AGG - Chr5:8967327-8967346 MsG0580024733.01.T01:intron 60.0%
CGACACTGGTACAGCCGTTG+TGG - Chr5:8969140-8969159 MsG0580024733.01.T01:CDS 60.0%
GAACCTGCTGCTGTCGACAC+TGG - Chr5:8969126-8969145 MsG0580024733.01.T01:CDS 60.0%
GAATGGGCAACCGAATGGGG+AGG - Chr5:8963094-8963113 MsG0580024733.01.T01:CDS 60.0%
GAGTGCCTGAGGAGCTCCAT+CGG + Chr5:8967335-8967354 None:intergenic 60.0%
GCTGCATCTGCCGCAGTACA+TGG - Chr5:8967367-8967386 MsG0580024733.01.T01:intron 60.0%
GGCTTTCACACGGAGGCCAA+AGG + Chr5:8965166-8965185 None:intergenic 60.0%
GGTGGCGATCCTACTGGTAC+TGG - Chr5:8967983-8968002 MsG0580024733.01.T01:intron 60.0%
TCGACAGCAGCAGGTTCAGC+CGG + Chr5:8969123-8969142 None:intergenic 60.0%
TGGGATTGGGTTCCGGTTGC+CGG + Chr5:8962949-8962968 None:intergenic 60.0%
!! ACAGGTGTTGGCGGTGGTGT+TGG - Chr5:8969069-8969088 MsG0580024733.01.T01:intron 60.0%
!! GTACCAGTGTCGACAGCAGC+AGG + Chr5:8969132-8969151 None:intergenic 60.0%
ACAGCAGCAGGTTCAGCCGG+TGG + Chr5:8969120-8969139 None:intergenic 65.0%
GCATTGCATGGGGGAGGTGG+TGG - Chr5:8967229-8967248 MsG0580024733.01.T01:intron 65.0%
GCCTCCGTGTGAAAGCCGTC+AGG - Chr5:8965169-8965188 MsG0580024733.01.T01:intron 65.0%
GCCTGACGGCTTTCACACGG+AGG + Chr5:8965173-8965192 None:intergenic 65.0%
TGTGGCTGGTGACAGGGCAC+CGG - Chr5:8967453-8967472 MsG0580024733.01.T01:intron 65.0%
!! GCATGGGGGAGGTGGTGGAA+AGG - Chr5:8967234-8967253 MsG0580024733.01.T01:intron 65.0%
!! GGAGGTACAGGTGTTGGCGG+TGG - Chr5:8969063-8969082 MsG0580024733.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 8962800 8969483 8962800 ID=MsG0580024733.01;Name=MsG0580024733.01
Chr5 mRNA 8962800 8969483 8962800 ID=MsG0580024733.01.T01;Parent=MsG0580024733.01;Name=MsG0580024733.01.T01;_AED=0.48;_eAED=0.48;_QI=246|1|1|1|1|1|11|265|592
Chr5 exon 8962800 8963271 8962800 ID=MsG0580024733.01.T01:exon:1842;Parent=MsG0580024733.01.T01
Chr5 exon 8963372 8963482 8963372 ID=MsG0580024733.01.T01:exon:1841;Parent=MsG0580024733.01.T01
Chr5 exon 8964028 8964316 8964028 ID=MsG0580024733.01.T01:exon:1840;Parent=MsG0580024733.01.T01
Chr5 exon 8964398 8964654 8964398 ID=MsG0580024733.01.T01:exon:1839;Parent=MsG0580024733.01.T01
Chr5 exon 8964794 8965155 8964794 ID=MsG0580024733.01.T01:exon:1838;Parent=MsG0580024733.01.T01
Chr5 exon 8965279 8965354 8965279 ID=MsG0580024733.01.T01:exon:1837;Parent=MsG0580024733.01.T01
Chr5 exon 8965449 8965538 8965449 ID=MsG0580024733.01.T01:exon:1836;Parent=MsG0580024733.01.T01
Chr5 exon 8965625 8965716 8965625 ID=MsG0580024733.01.T01:exon:1835;Parent=MsG0580024733.01.T01
Chr5 exon 8968385 8968488 8968385 ID=MsG0580024733.01.T01:exon:1834;Parent=MsG0580024733.01.T01
Chr5 exon 8968967 8969029 8968967 ID=MsG0580024733.01.T01:exon:1833;Parent=MsG0580024733.01.T01
Chr5 exon 8969110 8969483 8969110 ID=MsG0580024733.01.T01:exon:1832;Parent=MsG0580024733.01.T01
Chr5 five_prime_UTR 8969238 8969483 8969238 ID=MsG0580024733.01.T01:five_prime_utr;Parent=MsG0580024733.01.T01
Chr5 CDS 8969110 8969237 8969110 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8968967 8969029 8968967 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8968385 8968488 8968385 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8965625 8965716 8965625 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8965449 8965538 8965449 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8965279 8965354 8965279 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8964794 8965155 8964794 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8964398 8964654 8964398 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8964028 8964316 8964028 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8963372 8963482 8963372 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 CDS 8963065 8963271 8963065 ID=MsG0580024733.01.T01:cds;Parent=MsG0580024733.01.T01
Chr5 three_prime_UTR 8962800 8963064 8962800 ID=MsG0580024733.01.T01:three_prime_utr;Parent=MsG0580024733.01.T01
Gene Sequence

>MsG0580024733.01.T01

ATGGGGAAGAAGCAACACAGCAAAGACCGAATGTTCTTAACCAAAACTGAATGGGCAACCGAATGGGGAGGTTACAAATCCAAAGAAAATCGCACCGTTTTTAAACGTCTTCCTTTTTATTGCTGCGCACTTACTTTTACTCCGTTTGAGTTTCCAGTTTGTACACCGGATGGCAGCGTCTTCGATGTTATGAACATAACTCCATATATTATAAAATATGGTAAACATCCTGTTACTGGAGCTCCCTTGAAGCAGCAAGATCTCATTCCACTAACTTTTCACAAGAACTCAGAAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACCCACATTGTGGCAGTCAAAACTACTGGAAATGTCTTCTGCTATGAGGCTGTTAAAGAGTTAAACATCAAGACAAAAAACTGGAAGGAGCTCCTCACCGACGAGGCATTTACTAGGGATGACCTTATAACAATTCAGAATCCTAATGCACTTGACCAGAAGGTTCTTCTGGATTTTGATCATGTTAAACAGAATTTGAAAATTGACGATGAAGAACTACAGAAAATGAGTTCAGATCCAGCCTATAACATAAACATGTCGGGAGATATCAAACAAATGCTTAAAGAGCTTGGAACTGAGCAAGGAAAGGAAACTGCATTGCATGGGGGAGGTGGTGGAAAGGCACAAAAAGAAAGGGCCGCTGCACTCGCTGCCATTTTAGCTGCACGATCACAAGTTAAAGAAGATTCCAAATCGACCGATGGAGCTCCTCAGGCACTCAGTATTGTAGATGCTGCATCTGCCGCAGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCCAGAATAGCTATGCATGTGGCTGGTGACAGGGCACCGGTGAATGCAAAGATGGTTAAAAGTCGTTACACTACTGGCGCTGCTTCCCGGTCTTTTACTTCTACATCATATGATCCAGTTACAAAAAATGATTATGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAGGGATATGTACAACTGCATACAACACACGGTGATTTGAACATTGAGCTGCACTGTGATATAGCGCCCAGGGCATGCGAGAACTTCATCACGCTTTGTGAACGTGGATATTATAACGGAGTTGCTTTTCATAGAAGCATTAGGAATTTTATGATACAAGGTGGCGATCCTACTGGTACTGGTAGAGGTGGTGAATCAATTTGGGGAAAGCCTTTTAAGGATGAACTTAACTCCAAATTAGTCCACTCTGGAAGGGGTGTAGTTAGCATGGCAAACAGTGGCCCACATACTAATGGTTCCCAGTTTTTCATATTGTACAAATCTGCAAATCATTTAAACTTCAAACATACAGTTTTTGGAGGCGTAGTTGGTGGATTGACTACACTAGCAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTGGAGGAAATCAAGATAACAGGTGTCACAACTTTTGTCAATCCTTACACCGAGCCAGATGAGGAAGAAGAGCAAGCTAATGCCAAAGAGAAGAATGCAAATGATGAAGAAAATGACAAGGTTGGCTCATGGTATAGTAATCCTGGAGCTGGAACATCTGAATCTGGAGGTACAGGTGTTGGCGGTGGTGTTGGCAAATACTTGAAAGCTAGGAATGCTCCACCGGCTGAACCTGCTGCTGTCGACACTGGTACAGCCGTTGTGGGAAAGAAGAGAAAAGCAGTTGTCAGTGGTGAATTTAAAGATTTTTCTGGATGGTAG

Protein sequence

>MsG0580024733.01.T01

MGKKQHSKDRMFLTKTEWATEWGGYKSKENRTVFKRLPFYCCALTFTPFEFPVCTPDGSVFDVMNITPYIIKYGKHPVTGAPLKQQDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEAFTRDDLITIQNPNALDQKVLLDFDHVKQNLKIDDEELQKMSSDPAYNINMSGDIKQMLKELGTEQGKETALHGGGGGKAQKERAAALAAILAARSQVKEDSKSTDGAPQALSIVDAASAAVHGRSAAAAKASSSDKTAARIAMHVAGDRAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLATMEKVPVDDSDRPLEEIKITGVTTFVNPYTEPDEEEEQANAKEKNANDEENDKVGSWYSNPGAGTSESGGTGVGGGVGKYLKARNAPPAEPAAVDTGTAVVGKKRKAVVSGEFKDFSGW*