AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019970.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019970.01.T01 MTR_0004s0480 88.176 296 21 3 136 424 13 301 3.15e-155 443
MsG0480019970.01.T01 MTR_3g448400 57.386 176 34 1 2 136 30 205 1.22e-51 174
MsG0480019970.01.T01 MTR_3g081050 54.438 169 42 1 1 134 57 225 2.21e-48 170
MsG0480019970.01.T01 MTR_2g038700 47.826 161 59 1 1 136 1 161 3.11e-41 146
MsG0480019970.01.T01 MTR_1350s0010 80.220 91 18 0 2 92 196 286 6.60e-41 147
MsG0480019970.01.T01 MTR_6g461940 76.923 91 21 0 2 92 68 158 9.14e-40 141
MsG0480019970.01.T01 MTR_8g071930 54.676 139 62 1 1 138 20 158 3.21e-39 141
MsG0480019970.01.T01 MTR_4g113395 42.614 176 78 4 1 170 22 180 8.11e-37 135
MsG0480019970.01.T01 MTR_7g065810 54.412 136 38 3 1 136 67 178 1.60e-36 138
MsG0480019970.01.T01 MTR_0061s0090 73.626 91 24 0 1 91 131 221 6.03e-36 136
MsG0480019970.01.T01 MTR_3g056685 73.913 92 24 0 1 92 1 92 9.70e-36 130
MsG0480019970.01.T01 MTR_3g056685 81.579 38 7 0 11 48 95 132 1.16e-12 66.2
MsG0480019970.01.T01 MTR_8g016530 73.913 92 24 0 1 92 1 92 9.70e-36 130
MsG0480019970.01.T01 MTR_8g016530 81.579 38 7 0 11 48 95 132 1.16e-12 66.2
MsG0480019970.01.T01 MTR_6g034090 52.632 133 35 4 18 136 1 119 1.83e-33 126
MsG0480019970.01.T01 MTR_2g064455 59.783 92 37 0 1 92 12 103 5.52e-32 122
MsG0480019970.01.T01 MTR_0017s0190 51.908 131 47 2 1 121 131 255 3.42e-28 113
MsG0480019970.01.T01 MTR_3g093740 42.647 136 59 1 1 136 36 152 7.70e-28 112
MsG0480019970.01.T01 MTR_1g046940 77.465 71 16 0 2 72 98 168 1.26e-26 109
MsG0480019970.01.T01 MTR_6g033030 63.158 95 34 1 40 134 2 95 4.73e-25 103
MsG0480019970.01.T01 MTR_8g099690 71.053 76 21 1 61 136 18 92 1.76e-24 100
MsG0480019970.01.T01 MTR_0432s0030 61.224 98 38 0 1 98 39 136 2.31e-24 98.6
MsG0480019970.01.T01 MTR_6g017295 33.566 143 75 3 2 136 393 523 7.18e-20 92.4
MsG0480019970.01.T01 MTR_1g044185 37.681 138 41 2 1 138 1 93 3.62e-19 85.1
MsG0480019970.01.T01 MTR_2g037070 37.405 131 65 2 1 131 1 114 2.04e-17 80.5
MsG0480019970.01.T01 MTR_2g048730 34.932 146 65 2 13 137 28 164 2.66e-17 83.2
MsG0480019970.01.T01 MTR_1g026690 38.889 90 55 0 2 91 29 118 4.50e-17 82.8
MsG0480019970.01.T01 MTR_4g005490 39.865 148 52 3 2 140 68 187 6.41e-16 78.2
MsG0480019970.01.T01 MTR_1g049220 51.515 66 28 1 1 66 12 73 1.42e-15 73.9
MsG0480019970.01.T01 MTR_7g082580 53.425 73 34 0 10 82 33 105 1.69e-15 73.2
MsG0480019970.01.T01 MTR_3g068195 55.385 65 29 0 1 65 280 344 1.06e-14 76.6
MsG0480019970.01.T01 MTR_2g437490 36.364 88 56 0 2 89 14 101 2.48e-14 72.0
MsG0480019970.01.T01 MTR_7g103360 58.750 80 17 3 62 133 162 233 2.81e-14 74.7
MsG0480019970.01.T01 MTR_5g063315 31.527 203 63 4 1 136 18 211 5.76e-14 72.4
MsG0480019970.01.T01 MTR_8g015920 36.036 111 64 2 21 129 14 119 7.02e-14 68.6
MsG0480019970.01.T01 MTR_3g102690 36.709 79 50 0 15 93 2 80 1.38e-13 69.7
MsG0480019970.01.T01 MTR_2g029410 37.079 89 56 0 1 89 28 116 2.21e-13 70.9
MsG0480019970.01.T01 MTR_2g090750 35.227 88 57 0 2 89 282 369 3.17e-13 72.0
MsG0480019970.01.T01 MTR_0186s0100 61.364 44 17 0 1 44 22 65 7.12e-13 63.9
MsG0480019970.01.T01 MTR_2g079380 63.636 44 16 0 1 44 219 262 1.92e-12 67.8
MsG0480019970.01.T01 MTR_7g007240 47.297 74 38 1 23 96 1 73 2.28e-12 62.8
MsG0480019970.01.T01 MTR_6g006375 43.333 90 31 1 1 90 30 99 5.13e-12 66.2
MsG0480019970.01.T01 MTR_3g465160 39.344 122 64 3 18 134 2 118 1.22e-11 65.1
MsG0480019970.01.T01 MTR_7g080320 27.941 136 92 2 258 388 209 343 1.77e-11 65.9
MsG0480019970.01.T01 MTR_1g029370 66.667 42 14 0 1 42 55 96 2.67e-11 60.8
MsG0480019970.01.T01 MTR_0912s0020 68.293 41 13 0 93 133 3 43 5.53e-11 60.5
MsG0480019970.01.T01 MTR_5g074450 49.206 63 32 0 74 136 317 379 6.19e-11 64.7
MsG0480019970.01.T01 MTR_3g011980 63.830 47 17 0 93 139 34 80 8.40e-11 60.8
MsG0480019970.01.T01 MTR_4g074110 50.000 54 27 0 1 54 1 54 9.69e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019970.01.T01 AT5G51410 68.302 265 69 4 136 392 13 270 2.90e-115 341
MsG0480019970.01.T01 AT5G51410 68.302 265 69 4 136 392 13 270 2.90e-115 341
MsG0480019970.01.T01 AT5G51410 68.302 265 69 4 136 392 13 270 2.90e-115 341
MsG0480019970.01.T01 AT5G51410 68.302 265 69 4 136 392 13 270 2.90e-115 341
MsG0480019970.01.T01 AT5G51410 68.302 265 69 4 136 392 13 270 2.90e-115 341
MsG0480019970.01.T01 AT5G17440 33.846 130 71 3 240 364 199 318 1.45e-13 72.4
MsG0480019970.01.T01 AT3G03340 35.537 121 61 4 239 353 198 307 2.02e-13 71.6
MsG0480019970.01.T01 AT3G03340 34.973 183 94 7 239 409 276 445 6.03e-13 70.9
MsG0480019970.01.T01 AT3G03340 34.973 183 94 7 239 409 198 367 9.52e-13 70.1

Find 199 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTCATCAATATTATTAA+TGG 0.112591 4:-30974438 MsG0480019970.01.T01:three_prime_UTR
TGTTCAATTCAAACAGTATT+TGG 0.139534 4:+30973804 None:intergenic
CTTCTGTAGTTATGCTTAAT+AGG 0.142913 4:+30974644 None:intergenic
TTAAAACTATATTGTCTTAT+TGG 0.149434 4:-30980573 MsG0480019970.01.T01:CDS
ATCCGCGTCGGTTGTTGTTT+TGG 0.215828 4:-30980615 MsG0480019970.01.T01:CDS
TTGTAACTTCTCTCATAAAT+TGG 0.249696 4:-30974386 MsG0480019970.01.T01:three_prime_UTR
ATCTGTTAGAGTGTTAAATT+TGG 0.274429 4:-30973618 MsG0480019970.01.T01:three_prime_UTR
TTATGCTTTCTTCTTCTTCA+AGG 0.274900 4:-30980482 MsG0480019970.01.T01:CDS
GAGTAATGAAACATACAAAA+AGG 0.275241 4:+30974127 None:intergenic
GGAGAGAGATAGTGAAGATT+AGG 0.279070 4:-30980183 MsG0480019970.01.T01:CDS
ATATAAGTCTTGGGATATTA+AGG 0.283747 4:+30974547 None:intergenic
TAAGGTCTCGTTCTTGTACC+TGG 0.291902 4:-30980656 MsG0480019970.01.T01:CDS
GCAAGATCGGCTTCAAATTT+AGG 0.292888 4:+30975750 None:intergenic
GAGTATGAGTACCATGGATT+TGG 0.304001 4:+30973965 None:intergenic
GCATGGTAGGTTGGAGGATG+GGG 0.322787 4:-30980227 MsG0480019970.01.T01:CDS
ACTGTCATTGAACTGGGCTT+TGG 0.322946 4:-30973704 MsG0480019970.01.T01:three_prime_UTR
CTGTCATTGAACTGGGCTTT+GGG 0.325212 4:-30973703 MsG0480019970.01.T01:three_prime_UTR
GAGTGTTAAATTTGGTGTTC+AGG 0.328315 4:-30973610 MsG0480019970.01.T01:three_prime_UTR
TTCTGTAGTTATGCTTAATA+GGG 0.331026 4:+30974645 None:intergenic
TTTAATTGCTAGATAGCTTC+TGG 0.331096 4:-30973559 MsG0480019970.01.T01:three_prime_UTR
GGAAGTTTGTGGTTTCTATA+TGG 0.332001 4:-30977385 MsG0480019970.01.T01:intron
CTCCGAAATGAAATACTATA+AGG 0.335764 4:-30973237 MsG0480019970.01.T01:three_prime_UTR
TGTTTGAATTGAACATTCAT+AGG 0.337016 4:-30973796 MsG0480019970.01.T01:three_prime_UTR
GACTGGAAAATACAGGTATT+TGG 0.338145 4:-30973774 MsG0480019970.01.T01:three_prime_UTR
TCTTCTCTTGTTTGAGCTGT+TGG 0.338681 4:-30973267 MsG0480019970.01.T01:three_prime_UTR
TTCCTTATAGTATTTCATTT+CGG 0.342310 4:+30973235 None:intergenic
GAAAGATTGGTATTTGTTCA+TGG 0.342807 4:-30974166 MsG0480019970.01.T01:three_prime_UTR
CAAAGCCGGTTTCTATCCTT+TGG 0.353130 4:-30980550 MsG0480019970.01.T01:CDS
GGAGAAAATAAAGAACCTTC+TGG 0.354149 4:-30975494 MsG0480019970.01.T01:CDS
TAGAGGTAGTCTTTGGTATT+GGG 0.354171 4:-30980275 MsG0480019970.01.T01:CDS
CGGGGAAGGGGATGGTTTCT+AGG 0.357482 4:-30974727 MsG0480019970.01.T01:CDS
ATAGAGGTAGTCTTTGGTAT+TGG 0.364234 4:-30980276 MsG0480019970.01.T01:CDS
ATTGTGCGATTTGAGGTAAT+TGG 0.367267 4:-30973648 MsG0480019970.01.T01:three_prime_UTR
TCAAAACGTTTGATAAATCT+TGG 0.369243 4:-30973423 MsG0480019970.01.T01:three_prime_UTR
TTCTTCTTCAAGGCTTCATC+AGG 0.370819 4:-30980472 MsG0480019970.01.T01:intron
GAGAGAGATAGTGAAGATTA+GGG 0.373297 4:-30980182 MsG0480019970.01.T01:CDS
TTGTACCTGGGGTTGCCTAT+TGG 0.374168 4:-30980643 MsG0480019970.01.T01:CDS
GTTGAATCTCTTGGTGAAGC+TGG 0.375956 4:-30975466 MsG0480019970.01.T01:CDS
TATTACCTTGAGGGAAAGAT+TGG 0.378519 4:-30974179 MsG0480019970.01.T01:three_prime_UTR
GCACGTATGCATCATGCCTT+GGG 0.388877 4:+30975772 None:intergenic
TTTGAGGTGTTAGTCGATAG+AGG 0.394463 4:-30980292 MsG0480019970.01.T01:intron
GGTAAATAACCGCGTCGTGA+TGG 0.398405 4:-30973522 MsG0480019970.01.T01:three_prime_UTR
GACGGAGTGTTTCAAGTGAT+AGG 0.398540 4:-30974855 MsG0480019970.01.T01:CDS
AAGGTCTCGTTCTTGTACCT+GGG 0.398718 4:-30980655 MsG0480019970.01.T01:CDS
ATCTTACTGAATTTGTTGTT+AGG 0.399949 4:-30973994 MsG0480019970.01.T01:three_prime_UTR
TCTTTGGTATTGGGTGTTGT+TGG 0.405174 4:-30980266 MsG0480019970.01.T01:CDS
CAATATTATTAATGGAGAAA+AGG 0.410537 4:-30974430 MsG0480019970.01.T01:three_prime_UTR
ACACATATTTATATAAGTCT+TGG 0.412086 4:+30974537 None:intergenic
TGCATGGTAGGTTGGAGGAT+GGG 0.416871 4:-30980228 MsG0480019970.01.T01:CDS
TTGTGTTAAGACTGCCTTCT+CGG 0.418271 4:+30975229 None:intergenic
CACATATTTATATAAGTCTT+GGG 0.425432 4:+30974538 None:intergenic
GGGTCAATATGTTGGACTCT+TGG 0.425869 4:-30980717 MsG0480019970.01.T01:CDS
ATTAGGGAGGGTGGCGGCAG+TGG 0.425964 4:-30980166 MsG0480019970.01.T01:intron
TCTATCCTTTGGTGGTCACT+TGG 0.426556 4:-30980539 MsG0480019970.01.T01:CDS
AGTATGAGTACCATGGATTT+GGG 0.427784 4:+30973966 None:intergenic
ACAAGTTATTGTGCGATTTG+AGG 0.429654 4:-30973655 MsG0480019970.01.T01:three_prime_UTR
ATCTGAACAGTTGTCTGTCC+TGG 0.430404 4:-30975518 MsG0480019970.01.T01:CDS
ATTTCTGATACAAATTAACT+TGG 0.432186 4:+30973744 None:intergenic
AGTTATGTTACATTCTCAAC+TGG 0.432864 4:-30973449 MsG0480019970.01.T01:three_prime_UTR
CTGGAACAAGTTGAATCTCT+TGG 0.435647 4:-30975475 MsG0480019970.01.T01:CDS
TGGGACGATAAGGAAGTTTG+TGG 0.435949 4:-30977396 MsG0480019970.01.T01:CDS
GGCACGTATGCATCATGCCT+TGG 0.438040 4:+30975771 None:intergenic
AAGAAGAAGAAAGCATAAAC+AGG 0.442437 4:+30980487 None:intergenic
TGTGAATCTTATTACCTTGA+GGG 0.445694 4:-30974188 MsG0480019970.01.T01:three_prime_UTR
ATTCCGTACGAGTTACCAAT+TGG 0.447374 4:+30973877 None:intergenic
TAGTCGATAGAGGTAGTCTT+TGG 0.448486 4:-30980282 MsG0480019970.01.T01:CDS
ATTACCTATATCTTCTAAAC+CGG 0.448487 4:+30974015 None:intergenic
CAGCATTTATAAACCTGTGC+TGG 0.451398 4:+30974082 None:intergenic
CTCACAAAACTGAGCAAGAT+CGG 0.453847 4:+30975737 None:intergenic
AATATTATTAATGGAGAAAA+GGG 0.457945 4:-30974429 MsG0480019970.01.T01:three_prime_UTR
GTAAATAACCGCGTCGTGAT+GGG 0.462868 4:-30973521 MsG0480019970.01.T01:three_prime_UTR
CGGTGCGGTGCATGGTAGGT+TGG 0.468450 4:-30980236 MsG0480019970.01.T01:CDS
TCAGAATTTAAATTCAAAAG+AGG 0.469798 4:-30974574 MsG0480019970.01.T01:three_prime_UTR
GGTAATCGAGATCGGGGAAG+GGG 0.473164 4:-30974739 MsG0480019970.01.T01:CDS
GTGCATGGTAGGTTGGAGGA+TGG 0.474088 4:-30980229 MsG0480019970.01.T01:CDS
TATTGTCTTATTGGCAAAGC+CGG 0.477890 4:-30980564 MsG0480019970.01.T01:CDS
CATTAATAATATTGATGAAA+GGG 0.479290 4:+30974439 None:intergenic
TACCTGGGGTTGCCTATTGG+TGG 0.480249 4:-30980640 MsG0480019970.01.T01:CDS
TATCGAGAAATTCCACTACT+TGG 0.481237 4:+30974601 None:intergenic
AGGTAGAGGTAATCGAGATC+GGG 0.483464 4:-30974746 MsG0480019970.01.T01:CDS
AGAAGTGAGTTGGGACGATA+AGG 0.483654 4:-30977406 MsG0480019970.01.T01:CDS
AGCCGGTTTCTATCCTTTGG+TGG 0.483745 4:-30980547 MsG0480019970.01.T01:CDS
ACTCGGATCGTGAAAGATCT+CGG 0.487797 4:-30974777 MsG0480019970.01.T01:CDS
GTCTCAAGAAAGCTCTGAGA+TGG 0.488468 4:+30974472 None:intergenic
CATAAACAGGAAGTGCAGTC+AGG 0.488763 4:+30980500 None:intergenic
GCAGAGACAGGTACCACAAT+CGG 0.490454 4:-30974682 MsG0480019970.01.T01:three_prime_UTR
ACACTCCGTCTCTTTCTCTC+AGG 0.491217 4:+30974868 None:intergenic
ATAATCACAGGTGATGGACT+TGG 0.491646 4:-30975620 MsG0480019970.01.T01:intron
TGTCCAATTGGTAACTCGTA+CGG 0.493034 4:-30973880 MsG0480019970.01.T01:three_prime_UTR
TAGCGGTCATAAGCATACTT+TGG 0.496252 4:-30973400 MsG0480019970.01.T01:three_prime_UTR
GTGATTGTCATTGCTGCAAA+AGG 0.502290 4:-30974240 MsG0480019970.01.T01:three_prime_UTR
CATGGTAGGTTGGAGGATGG+GGG 0.502545 4:-30980226 MsG0480019970.01.T01:CDS
AGAAGAGCGAAGAAAACAAA+AGG 0.502735 4:-30974899 MsG0480019970.01.T01:CDS
GCTGTCAGTGGTGGCGGTGG+TGG 0.503620 4:+30975547 None:intergenic
GACCACCAAAGGATAGAAAC+CGG 0.506882 4:+30980545 None:intergenic
GCACGGTACGGTGCGGTGCA+TGG 0.508299 4:-30980244 MsG0480019970.01.T01:CDS
GTCATTGCTGCAAAAGGGGA+TGG 0.509818 4:-30974234 MsG0480019970.01.T01:three_prime_UTR
TTCATAAAAGCATGTTGGTG+GGG 0.509972 4:-30980738 None:intergenic
GTCGGAGTTGTTCCATGTGG+TGG 0.512391 4:-30980204 MsG0480019970.01.T01:CDS
GAGGTAATCGAGATCGGGGA+AGG 0.512789 4:-30974741 MsG0480019970.01.T01:CDS
GCGAAGAAAACAAAAGGAGC+AGG 0.514193 4:-30974893 MsG0480019970.01.T01:CDS
ACGGAGTGTTTCAAGTGATA+GGG 0.514199 4:-30974854 MsG0480019970.01.T01:CDS
CTCGGATCGTGAAAGATCTC+GGG 0.514400 4:-30974776 MsG0480019970.01.T01:CDS
ATCGAGATAGGCAGCGTGAT+AGG 0.514417 4:-30974813 MsG0480019970.01.T01:CDS
TCATAAAAGCATGTTGGTGG+GGG 0.515262 4:-30980737 None:intergenic
ATCTCTTGGTGAAGCTGGGA+AGG 0.515528 4:-30975461 MsG0480019970.01.T01:CDS
AGGGGATGGTTTCTAGGTTG+AGG 0.517386 4:-30974721 MsG0480019970.01.T01:exon
GGGTTACAAAGAAGTGAGTT+GGG 0.517957 4:-30977415 MsG0480019970.01.T01:CDS
GATACAAATTAACTTGGCAA+AGG 0.519130 4:+30973750 None:intergenic
TTTCATAAAAGCATGTTGGT+GGG 0.519639 4:-30980739 None:intergenic
TTGAATCTCTTGGTGAAGCT+GGG 0.520092 4:-30975465 MsG0480019970.01.T01:CDS
ATACAAATTAACTTGGCAAA+GGG 0.523536 4:+30973751 None:intergenic
AGAAAATGAAATCACACAAA+GGG 0.523549 4:+30973308 None:intergenic
TGCGGTGCATGGTAGGTTGG+AGG 0.524163 4:-30980233 MsG0480019970.01.T01:CDS
GGAAAGCAGCATGTTGGCTA+TGG 0.524490 4:-30975092 MsG0480019970.01.T01:CDS
GAATTGAACATTCATAGGAC+TGG 0.525227 4:-30973791 MsG0480019970.01.T01:three_prime_UTR
ACAGCTCAAACAAGAGAAGA+TGG 0.525623 4:+30973270 None:intergenic
CGACGCGGATTGCCACCAAT+AGG 0.526843 4:+30980628 None:intergenic
GGTACGGTGCGGTGCATGGT+AGG 0.527437 4:-30980240 MsG0480019970.01.T01:CDS
GGGGTTACAAAGAAGTGAGT+TGG 0.527552 4:-30977416 MsG0480019970.01.T01:CDS
CTTATAGTATTTCATTTCGG+AGG 0.528339 4:+30973238 None:intergenic
CACTATCTCTCTCCACCACA+TGG 0.530159 4:+30980192 None:intergenic
AAGGTAGAGGTAATCGAGAT+CGG 0.530372 4:-30974747 MsG0480019970.01.T01:CDS
GTGTTGCTCTTCTATCTATG+TGG 0.532839 4:-30976256 MsG0480019970.01.T01:CDS
ATAGTGAAGATTAGGGAGGG+TGG 0.533791 4:-30980175 MsG0480019970.01.T01:CDS
GAGATTCAACTTGTTCCAGA+AGG 0.534767 4:+30975479 None:intergenic
AAGTTGATATAAACCAGCAC+AGG 0.535092 4:-30974095 MsG0480019970.01.T01:three_prime_UTR
TTCATAGGACTGGAAAATAC+AGG 0.535322 4:-30973781 MsG0480019970.01.T01:three_prime_UTR
AGCTGAAGCTCTTATGAGAA+AGG 0.541211 4:-30975431 MsG0480019970.01.T01:intron
CTTCTGGACATGATATGTGC+AGG 0.542392 4:-30973543 MsG0480019970.01.T01:three_prime_UTR
TTAGGCATTTCCCAAATCCA+TGG 0.543183 4:-30973976 MsG0480019970.01.T01:three_prime_UTR
ATCGAGATCGGGGAAGGGGA+TGG 0.546095 4:-30974735 MsG0480019970.01.T01:CDS
CTTGACTGAGGAAGAAAGAA+GGG 0.550258 4:-30977436 MsG0480019970.01.T01:CDS
CCATTAATAATATTGATGAA+AGG 0.552598 4:+30974438 None:intergenic
ACTTGACTGAGGAAGAAAGA+AGG 0.553452 4:-30977437 MsG0480019970.01.T01:CDS
GATTGCTAAGGAGAAGGCTA+AGG 0.554953 4:-30974953 MsG0480019970.01.T01:CDS
TCAGCTGTCAGTGGTGGCGG+TGG 0.557872 4:+30975544 None:intergenic
GGAAGAAGAAAGATTGACTC+GGG 0.558620 4:-30974932 MsG0480019970.01.T01:CDS
AGAACTCAGTCTCATGTCGC+AGG 0.559633 4:-30975113 MsG0480019970.01.T01:CDS
TGATTGTCATTGCTGCAAAA+GGG 0.560517 4:-30974239 MsG0480019970.01.T01:three_prime_UTR
TGGGTGTTGTTGGCACGGTA+CGG 0.562954 4:-30980256 MsG0480019970.01.T01:CDS
GAAAGATCTCGGGAATATGA+AGG 0.563627 4:-30974766 MsG0480019970.01.T01:CDS
AGGTAATCGAGATCGGGGAA+GGG 0.563842 4:-30974740 MsG0480019970.01.T01:CDS
GTCATTGAACTACACTCTGA+AGG 0.565226 4:-30974040 MsG0480019970.01.T01:three_prime_UTR
GTTGAGCTGTAAAGTTGGTA+AGG 0.565364 4:-30980674 MsG0480019970.01.T01:CDS
ATGTGAATCTTATTACCTTG+AGG 0.567214 4:-30974189 MsG0480019970.01.T01:three_prime_UTR
GCAGCATGTTGGCTATGGTA+TGG 0.570060 4:-30975087 MsG0480019970.01.T01:CDS
TCTCAAGAAAGCTCTGAGAT+GGG 0.570303 4:+30974473 None:intergenic
GGTATTGGGTGTTGTTGGCA+CGG 0.574986 4:-30980261 MsG0480019970.01.T01:CDS
TCTCGGGAATATGAAGGTAG+AGG 0.580782 4:-30974760 MsG0480019970.01.T01:CDS
GAGATAGTGAAGATTAGGGA+GGG 0.583418 4:-30980178 MsG0480019970.01.T01:CDS
TTATAGTATTTCATTTCGGA+GGG 0.584383 4:+30973239 None:intergenic
ATTAATGGAGAAAAGGGTCG+AGG 0.584758 4:-30974423 MsG0480019970.01.T01:three_prime_UTR
CTATTAAGCATAACTACAGA+AGG 0.587485 4:-30974643 MsG0480019970.01.T01:three_prime_UTR
GTTGTGTTTGCTCCAAGTAG+TGG 0.588205 4:-30974613 MsG0480019970.01.T01:three_prime_UTR
GGTATGTGGTTCGTTTCTTG+TGG 0.588655 4:-30975153 MsG0480019970.01.T01:CDS
GAACTACACTCTGAAGGCAC+CGG 0.590144 4:-30974034 MsG0480019970.01.T01:three_prime_UTR
AAGAACCAAGTGACCACCAA+AGG 0.592300 4:+30980534 None:intergenic
AGAGATAGTGAAGATTAGGG+AGG 0.592317 4:-30980179 MsG0480019970.01.T01:CDS
CTATTGGTGGCAATCCGCGT+CGG 0.596329 4:-30980627 MsG0480019970.01.T01:CDS
AATTGGTAACTCGTACGGAA+TGG 0.596682 4:-30973875 MsG0480019970.01.T01:three_prime_UTR
AACGTGATCTGCTCCGATTG+TGG 0.597216 4:+30974669 None:intergenic
TGACTTCATAAATGAATACA+AGG 0.598021 4:-30975060 MsG0480019970.01.T01:intron
AAATACCAATCTTTCCCTCA+AGG 0.600269 4:+30974174 None:intergenic
AGGAAGAAGAAAGATTGACT+CGG 0.603218 4:-30974933 MsG0480019970.01.T01:CDS
CGTTTGATAAATCTTGGTAG+CGG 0.604078 4:-30973417 MsG0480019970.01.T01:three_prime_UTR
GTGAAGATTAGGGAGGGTGG+CGG 0.607729 4:-30980172 MsG0480019970.01.T01:CDS
GTCGCAGGAAAGCAGCATGT+TGG 0.607800 4:-30975098 MsG0480019970.01.T01:CDS
GGCACCGGTTTAGAAGATAT+AGG 0.609877 4:-30974019 MsG0480019970.01.T01:three_prime_UTR
AGGTCTCGTTCTTGTACCTG+GGG 0.610139 4:-30980654 MsG0480019970.01.T01:CDS
AATGCTTCAGGAGAAGAAGA+TGG 0.611727 4:-30975186 MsG0480019970.01.T01:CDS
TGCCACCAATAGGCAACCCC+AGG 0.615236 4:+30980638 None:intergenic
AAGAAAATGAAATCACACAA+AGG 0.617075 4:+30973307 None:intergenic
ATCGTGATAAAGATCGAGAT+AGG 0.617765 4:-30974825 MsG0480019970.01.T01:CDS
TCTGTAGTTATGCTTAATAG+GGG 0.619225 4:+30974646 None:intergenic
ATGGCACTCTGTGAGGTATG+TGG 0.625178 4:-30975167 MsG0480019970.01.T01:CDS
GATTGTCATTGCTGCAAAAG+GGG 0.626896 4:-30974238 MsG0480019970.01.T01:three_prime_UTR
GTTAAGCTATCTTAGTGCTG+TGG 0.632856 4:-30976234 MsG0480019970.01.T01:CDS
GTTGGACTCTTGGTTGAGTG+AGG 0.633593 4:-30980707 MsG0480019970.01.T01:CDS
ATGGAGAAAAGGGTCGAGGT+AGG 0.633613 4:-30974419 MsG0480019970.01.T01:three_prime_UTR
TGAACAGTTGTCTGTCCTGG+AGG 0.636803 4:-30975515 MsG0480019970.01.T01:CDS
AGGATCCTGAGAGAAAGAGA+CGG 0.640354 4:-30974873 MsG0480019970.01.T01:CDS
AATTATGAGTATGAGTACCA+TGG 0.643720 4:+30973959 None:intergenic
TTGTTTCTCCCATCACGACG+CGG 0.647983 4:+30973513 None:intergenic
ACGAGAACGTCTTAATCAAG+AGG 0.649224 4:-30975578 MsG0480019970.01.T01:CDS
ATGGTTTCTAGGTTGAGGAA+CGG 0.651338 4:-30974716 MsG0480019970.01.T01:exon
TCTGTGTTGAGCTGTAAAGT+TGG 0.654654 4:-30980679 MsG0480019970.01.T01:CDS
GGTAGAGGTAATCGAGATCG+GGG 0.658261 4:-30974745 MsG0480019970.01.T01:CDS
GAAGAAGATGGCACTCTGTG+AGG 0.661944 4:-30975174 MsG0480019970.01.T01:CDS
AGAACGTCTTAATCAAGAGG+TGG 0.666877 4:-30975575 MsG0480019970.01.T01:CDS
GGAGACACTTAATACCGAGA+AGG 0.669990 4:-30975243 MsG0480019970.01.T01:CDS
TTCAGCTCGAAACTTGACTG+AGG 0.672653 4:-30977448 MsG0480019970.01.T01:intron
TTGACTGAGGAAGAAAGAAG+GGG 0.676867 4:-30977435 MsG0480019970.01.T01:CDS
CACGTATGCATCATGCCTTG+GGG 0.690040 4:+30975773 None:intergenic
TCCCAAAACAACAACCGACG+CGG 0.697815 4:+30980613 None:intergenic
TAGGTACAGAGATAGAGACT+CGG 0.703615 4:-30974794 MsG0480019970.01.T01:CDS
GGGGTCGGAGTTGTTCCATG+TGG 0.713022 4:-30980207 MsG0480019970.01.T01:CDS
GTTGTTGGCACGGTACGGTG+CGG 0.726833 4:-30980251 MsG0480019970.01.T01:CDS
TTGGATAGAAGAGTAAAACG+TGG 0.775215 4:-30975601 MsG0480019970.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTATATTAAATATA+TGG - Chr4:30977188-30977207 MsG0480019970.01.T01:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+CGG + Chr4:30980118-30980137 None:intergenic 0.0%
!! ATAAATGTATAGATTAATTT+AGG + Chr4:30978930-30978949 None:intergenic 10.0%
!!! TATTATTTATAAGTTTGTTA+AGG - Chr4:30976806-30976825 MsG0480019970.01.T01:intron 10.0%
!! AAAAAAAAAAATTCAAACCA+TGG - Chr4:30976130-30976149 MsG0480019970.01.T01:intron 15.0%
!! AAAGGTTAACAAAAAAAATT+AGG + Chr4:30977772-30977791 None:intergenic 15.0%
!! AAGGTTAACAAAAAAAATTA+GGG + Chr4:30977771-30977790 None:intergenic 15.0%
!! AAGTTAAGTTATATTCTTTA+TGG - Chr4:30975760-30975779 MsG0480019970.01.T01:CDS 15.0%
!! AATATTATTAATGGAGAAAA+GGG - Chr4:30979525-30979544 MsG0480019970.01.T01:intron 15.0%
!! ACAAAAACAACTAAATAATA+TGG - Chr4:30975167-30975186 MsG0480019970.01.T01:CDS 15.0%
!! ATTGACATTCAAATTTAATA+TGG + Chr4:30977809-30977828 None:intergenic 15.0%
!! CAAAAACAACTAAATAATAT+GGG - Chr4:30975168-30975187 MsG0480019970.01.T01:CDS 15.0%
!! CATTAATAATATTGATGAAA+GGG + Chr4:30979518-30979537 None:intergenic 15.0%
!! GTTCAAAAAATTATTAATCT+TGG - Chr4:30977243-30977262 MsG0480019970.01.T01:intron 15.0%
!! TAATTCACCTATAAAATAAA+TGG + Chr4:30976161-30976180 None:intergenic 15.0%
!! TTAAAACTATATTGTCTTAT+TGG - Chr4:30973381-30973400 MsG0480019970.01.T01:three_prime_UTR 15.0%
!! TTGACATTCAAATTTAATAT+GGG + Chr4:30977808-30977827 None:intergenic 15.0%
!! TTTGTCAAAAAATAAAAAGA+GGG - Chr4:30976230-30976249 MsG0480019970.01.T01:CDS 15.0%
!!! AAGACAATATAGTTTTAATA+CGG + Chr4:30973379-30973398 None:intergenic 15.0%
!!! AATTATTTAGTCTTATTTGA+AGG - Chr4:30976176-30976195 MsG0480019970.01.T01:intron 15.0%
!!! AATTTAGAATTTTGTATCTA+GGG + Chr4:30976312-30976331 None:intergenic 15.0%
!!! ATGTTGTAATAAAAAGTATA+AGG + Chr4:30975146-30975165 None:intergenic 15.0%
!!! CTTATATAAATATGTGTTTT+TGG - Chr4:30979423-30979442 MsG0480019970.01.T01:intron 15.0%
!!! TAATTTAGAATTTTGTATCT+AGG + Chr4:30976313-30976332 None:intergenic 15.0%
!!! TGTTGTAATAAAAAGTATAA+GGG + Chr4:30975145-30975164 None:intergenic 15.0%
!!! TTTTGTCAAAAAATAAAAAG+AGG - Chr4:30976229-30976248 MsG0480019970.01.T01:CDS 15.0%
!! AAAAAATTAGGGTATACTTA+CGG + Chr4:30977760-30977779 None:intergenic 20.0%
!! AAATTGAATAAAAAGCAAGT+TGG + Chr4:30974635-30974654 None:intergenic 20.0%
!! ACACATATTTATATAAGTCT+TGG + Chr4:30979420-30979439 None:intergenic 20.0%
!! ACCTAAATACAGATATAAAT+CGG + Chr4:30975865-30975884 None:intergenic 20.0%
!! AGTAATGAAACATACAAAAA+GGG + Chr4:30979829-30979848 None:intergenic 20.0%
!! ATATCAAGAATCATTTCTTA+CGG + Chr4:30974552-30974571 None:intergenic 20.0%
!! ATTAACATGAATACAAGATA+TGG - Chr4:30974769-30974788 MsG0480019970.01.T01:CDS 20.0%
!! ATTACGTTAAAAAGAGAATT+TGG - Chr4:30974411-30974430 MsG0480019970.01.T01:three_prime_UTR 20.0%
!! ATTTCTGATACAAATTAACT+TGG + Chr4:30980213-30980232 None:intergenic 20.0%
!! CAATATTATTAATGGAGAAA+AGG - Chr4:30979524-30979543 MsG0480019970.01.T01:intron 20.0%
!! CACATATTTATATAAGTCTT+GGG + Chr4:30979419-30979438 None:intergenic 20.0%
!! CCATTAATAATATTGATGAA+AGG + Chr4:30979519-30979538 None:intergenic 20.0%
!! CCTTTCATCAATATTATTAA+TGG - Chr4:30979516-30979535 MsG0480019970.01.T01:intron 20.0%
!! GAAATAATAATAGTGTAATC+TGG + Chr4:30974734-30974753 None:intergenic 20.0%
!! GAAATCAAAAAACAATTTAC+TGG + Chr4:30978092-30978111 None:intergenic 20.0%
!! TACACTATTATTATTTCCTA+CGG - Chr4:30974737-30974756 MsG0480019970.01.T01:CDS 20.0%
!! TCAGAATTTAAATTCAAAAG+AGG - Chr4:30979380-30979399 MsG0480019970.01.T01:intron 20.0%
!! TTAAGTTATATTCTTTATGG+TGG - Chr4:30975763-30975782 MsG0480019970.01.T01:CDS 20.0%
!! TTCCTTATAGTATTTCATTT+CGG + Chr4:30980722-30980741 None:intergenic 20.0%
!!! AAAGGATAAGAAACTTTTAA+AGG + Chr4:30977906-30977925 None:intergenic 20.0%
!!! AAGGATAAGAAACTTTTAAA+GGG + Chr4:30977905-30977924 None:intergenic 20.0%
!!! AATTTTCGTGTCTTATATAT+AGG - Chr4:30974650-30974669 MsG0480019970.01.T01:three_prime_UTR 20.0%
!!! ACTCATACTCATAATTTTAT+TGG - Chr4:30980002-30980021 MsG0480019970.01.T01:intron 20.0%
!!! ATTAAATAGTTTGAGATTTC+TGG - Chr4:30977564-30977583 MsG0480019970.01.T01:intron 20.0%
!!! ATTAACACTTTTTCATTTTG+AGG + Chr4:30978751-30978770 None:intergenic 20.0%
!!! CTCATACTCATAATTTTATT+GGG - Chr4:30980003-30980022 MsG0480019970.01.T01:intron 20.0%
!!! GATTTGATTAATGTGTTTTA+AGG - Chr4:30975704-30975723 MsG0480019970.01.T01:intron 20.0%
!!! GCATTTTATGCTTTATTTAT+CGG + Chr4:30978070-30978089 None:intergenic 20.0%
!!! TCATACTCATAATTTTATTG+GGG - Chr4:30980004-30980023 MsG0480019970.01.T01:intron 20.0%
!!! TCTTCCATTGATTTTTTTTT+TGG - Chr4:30973512-30973531 MsG0480019970.01.T01:three_prime_UTR 20.0%
!!! TTTTTTTTTTTTTACGGATG+AGG + Chr4:30980112-30980131 None:intergenic 20.0%
! AACATATGCCTATGATAATT+TGG - Chr4:30977959-30977978 MsG0480019970.01.T01:intron 25.0%
! AAGAAAATGAAATCACACAA+AGG + Chr4:30980650-30980669 None:intergenic 25.0%
! AATAGTATACACAAGGAAAA+GGG + Chr4:30978568-30978587 None:intergenic 25.0%
! AATCATCAATAGTATACACA+AGG + Chr4:30978575-30978594 None:intergenic 25.0%
! AATTTCATGACTGTTCAATT+GGG - Chr4:30977826-30977845 MsG0480019970.01.T01:intron 25.0%
! ACAAATGCATTATTATATGC+AGG - Chr4:30976030-30976049 MsG0480019970.01.T01:intron 25.0%
! ACATCATTTATTCAGTAGAT+CGG - Chr4:30975437-30975456 MsG0480019970.01.T01:CDS 25.0%
! AGAAAATGAAATCACACAAA+GGG + Chr4:30980649-30980668 None:intergenic 25.0%
! ATATAAGTCTTGGGATATTA+AGG + Chr4:30979410-30979429 None:intergenic 25.0%
! ATATTGCTTTGCTAAGTAAA+TGG - Chr4:30973637-30973656 MsG0480019970.01.T01:three_prime_UTR 25.0%
! ATTACCTATATCTTCTAAAC+CGG + Chr4:30979942-30979961 None:intergenic 25.0%
! CAAATGCATTATTATATGCA+GGG - Chr4:30976031-30976050 MsG0480019970.01.T01:intron 25.0%
! CAGTAGTTCATTTATTACTA+AGG - Chr4:30975601-30975620 MsG0480019970.01.T01:CDS 25.0%
! CTAAAATAAGCCAATCAAAA+CGG + Chr4:30976758-30976777 None:intergenic 25.0%
! CTGACTTTATAAATTCTTAG+TGG - Chr4:30975886-30975905 MsG0480019970.01.T01:intron 25.0%
! GAGTAATGAAACATACAAAA+AGG + Chr4:30979830-30979849 None:intergenic 25.0%
! TAACCAAATCAATTGAAGAA+AGG + Chr4:30975647-30975666 None:intergenic 25.0%
! TAATGAAATGATGTGCAAAA+AGG - Chr4:30974350-30974369 MsG0480019970.01.T01:three_prime_UTR 25.0%
! TAGTTCATTTATTACTAAGG+TGG - Chr4:30975604-30975623 MsG0480019970.01.T01:CDS 25.0%
! TCAAAACGTTTGATAAATCT+TGG - Chr4:30980531-30980550 MsG0480019970.01.T01:CDS 25.0%
! TGACAAAGTAAAATATGCAA+AGG + Chr4:30977924-30977943 None:intergenic 25.0%
! TGACTTCATAAATGAATACA+AGG - Chr4:30978894-30978913 MsG0480019970.01.T01:intron 25.0%
! TGTCTTATATATAGGTAGAA+GGG - Chr4:30974658-30974677 MsG0480019970.01.T01:three_prime_UTR 25.0%
! TGTTCAATTCAAACAGTATT+TGG + Chr4:30980153-30980172 None:intergenic 25.0%
! TGTTTGAATTGAACATTCAT+AGG - Chr4:30980158-30980177 MsG0480019970.01.T01:intron 25.0%
! TTATAGTATTTCATTTCGGA+GGG + Chr4:30980718-30980737 None:intergenic 25.0%
! TTCTGTAGTTATGCTTAATA+GGG + Chr4:30979312-30979331 None:intergenic 25.0%
! TTCTTGATATGATCAATACA+AGG - Chr4:30974562-30974581 MsG0480019970.01.T01:three_prime_UTR 25.0%
! TTGTAACTTCTCTCATAAAT+TGG - Chr4:30979568-30979587 MsG0480019970.01.T01:intron 25.0%
!! AAACATTCCATTTAAAGCTT+TGG - Chr4:30975056-30975075 MsG0480019970.01.T01:intron 25.0%
!! ACAATTGCAATGTTTTCAAA+GGG + Chr4:30976948-30976967 None:intergenic 25.0%
!! AGTTGTTGATAAATCAACTA+CGG - Chr4:30973937-30973956 MsG0480019970.01.T01:three_prime_UTR 25.0%
!! ATAACCATACTTAGTGTTTT+TGG - Chr4:30975107-30975126 MsG0480019970.01.T01:CDS 25.0%
!! ATACAAATTAACTTGGCAAA+GGG + Chr4:30980206-30980225 None:intergenic 25.0%
!! ATATTTTACTTTGTCATGCA+TGG - Chr4:30977928-30977947 MsG0480019970.01.T01:intron 25.0%
!! ATCTGTTAGAGTGTTAAATT+TGG - Chr4:30980336-30980355 MsG0480019970.01.T01:intron 25.0%
!! TAACCATACTTAGTGTTTTT+GGG - Chr4:30975108-30975127 MsG0480019970.01.T01:CDS 25.0%
!! TAAGATATTTAGAGTTGAAG+AGG + Chr4:30977401-30977420 None:intergenic 25.0%
!! TAAGTTTTCTCATCATCAAA+GGG - Chr4:30979451-30979470 MsG0480019970.01.T01:intron 25.0%
!! TACAATTGCAATGTTTTCAA+AGG + Chr4:30976949-30976968 None:intergenic 25.0%
!! TTAAGTTTTCTCATCATCAA+AGG - Chr4:30979450-30979469 MsG0480019970.01.T01:intron 25.0%
!! TTTTTAATGTAGAATGAGGA+TGG + Chr4:30978268-30978287 None:intergenic 25.0%
!!! AAGAAAGTCCTTTTGTTTTT+GGG - Chr4:30975795-30975814 MsG0480019970.01.T01:intron 25.0%
!!! AAGAGAATTTGGTTTTGAAT+TGG - Chr4:30974422-30974441 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! ACTGTTTTTAATGTAGAATG+AGG + Chr4:30978272-30978291 None:intergenic 25.0%
!!! ATCTTACTGAATTTGTTGTT+AGG - Chr4:30979960-30979979 MsG0480019970.01.T01:intron 25.0%
!!! ATTGATTTTTTTTTTGGAGG+GGG - Chr4:30973518-30973537 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! CATTGATTTTTTTTTTGGAG+GGG - Chr4:30973517-30973536 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! CCATTGATTTTTTTTTTGGA+GGG - Chr4:30973516-30973535 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! CTCGTGAATTTATTTTTTCA+CGG - Chr4:30978670-30978689 MsG0480019970.01.T01:intron 25.0%
!!! TAAGAAAGTCCTTTTGTTTT+TGG - Chr4:30975794-30975813 MsG0480019970.01.T01:intron 25.0%
!!! TCCATTGATTTTTTTTTTGG+AGG - Chr4:30973515-30973534 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! TCGTGAATTTATTTTTTCAC+GGG - Chr4:30978671-30978690 MsG0480019970.01.T01:intron 25.0%
!!! TTTGACTTTTTGTTGGTATT+TGG - Chr4:30977118-30977137 MsG0480019970.01.T01:intron 25.0%
!!! TTTGTTTTGGTATGATTGTT+GGG - Chr4:30973868-30973887 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! TTTTGTTTTGGTATGATTGT+TGG - Chr4:30973867-30973886 MsG0480019970.01.T01:three_prime_UTR 25.0%
!!! TTTTTGTTGGTATTTGGAAT+AGG - Chr4:30977124-30977143 MsG0480019970.01.T01:intron 25.0%
AAACTCAGTTACACATTTAC+GGG + Chr4:30978114-30978133 None:intergenic 30.0%
AAAGAATGCAAGAATTGATG+AGG + Chr4:30974958-30974977 None:intergenic 30.0%
AAAGTGAGTAATTGCTCTTT+AGG + Chr4:30974600-30974619 None:intergenic 30.0%
AAGTTCATTCTGTTTCATGT+AGG + Chr4:30977357-30977376 None:intergenic 30.0%
AATTATGAGTATGAGTACCA+TGG + Chr4:30979998-30980017 None:intergenic 30.0%
ACAAGTTCATTTCTACGATT+GGG + Chr4:30978615-30978634 None:intergenic 30.0%
AGATGTTACAAATGAGAATG+AGG - Chr4:30976719-30976738 MsG0480019970.01.T01:intron 30.0%
AGTTATGTTACATTCTCAAC+TGG - Chr4:30980505-30980524 MsG0480019970.01.T01:CDS 30.0%
ATATGAGTCCCAAAAACAAA+AGG + Chr4:30975806-30975825 None:intergenic 30.0%
ATCACGAAGTAATTGTAATG+AGG + Chr4:30975383-30975402 None:intergenic 30.0%
ATGAAAAACTGTCATTGAAC+TGG - Chr4:30980243-30980262 MsG0480019970.01.T01:CDS 30.0%
ATGTGAATCTTATTACCTTG+AGG - Chr4:30979765-30979784 MsG0480019970.01.T01:intron 30.0%
ATTTCATGACTGTTCAATTG+GGG - Chr4:30977827-30977846 MsG0480019970.01.T01:intron 30.0%
CAACAACTAAATCAAACAGA+CGG + Chr4:30973925-30973944 None:intergenic 30.0%
CAAGACAAAACAATGAATGA+TGG - Chr4:30974795-30974814 MsG0480019970.01.T01:CDS 30.0%
CAATAGTATACACAAGGAAA+AGG + Chr4:30978569-30978588 None:intergenic 30.0%
CAATTTCATGACTGTTCAAT+TGG - Chr4:30977825-30977844 MsG0480019970.01.T01:intron 30.0%
CCCTCCAAAAAAAAAATCAA+TGG + Chr4:30973519-30973538 None:intergenic 30.0%
CTATTAAGCATAACTACAGA+AGG - Chr4:30979311-30979330 MsG0480019970.01.T01:intron 30.0%
CTCCGAAATGAAATACTATA+AGG - Chr4:30980717-30980736 MsG0480019970.01.T01:CDS 30.0%
CTTATAGTATTTCATTTCGG+AGG + Chr4:30980719-30980738 None:intergenic 30.0%
CTTATTAACTGTGATAGCTT+TGG - Chr4:30977417-30977436 MsG0480019970.01.T01:CDS 30.0%
CTTCTGTAGTTATGCTTAAT+AGG + Chr4:30979313-30979332 None:intergenic 30.0%
GAAACTCAGTTACACATTTA+CGG + Chr4:30978115-30978134 None:intergenic 30.0%
GAAAGATTGGTATTTGTTCA+TGG - Chr4:30979788-30979807 MsG0480019970.01.T01:intron 30.0%
GTGTCTTATATATAGGTAGA+AGG - Chr4:30974657-30974676 MsG0480019970.01.T01:three_prime_UTR 30.0%
GTTTCAAACAAGAAATGGAA+TGG - Chr4:30974463-30974482 MsG0480019970.01.T01:three_prime_UTR 30.0%
TAATACAGTAATTGACACCT+AGG + Chr4:30977326-30977345 None:intergenic 30.0%
TACGCATACCAAATTATCAT+AGG + Chr4:30977970-30977989 None:intergenic 30.0%
TCACGAAGTAATTGTAATGA+GGG + Chr4:30975382-30975401 None:intergenic 30.0%
TCTCATAAAGTGAATAAGTG+AGG + Chr4:30976078-30976097 None:intergenic 30.0%
TCTGTAGTTATGCTTAATAG+GGG + Chr4:30979311-30979330 None:intergenic 30.0%
TGAAAAACTGTCATTGAACT+GGG - Chr4:30980244-30980263 MsG0480019970.01.T01:CDS 30.0%
TGAATTGACACAAAATTCCA+TGG + Chr4:30976986-30977005 None:intergenic 30.0%
TGTGAATCTTATTACCTTGA+GGG - Chr4:30979766-30979785 MsG0480019970.01.T01:intron 30.0%
TTATGCTTTCTTCTTCTTCA+AGG - Chr4:30973472-30973491 MsG0480019970.01.T01:three_prime_UTR 30.0%
TTCATAAGCTCAATCTAAAC+AGG - Chr4:30976922-30976941 MsG0480019970.01.T01:intron 30.0%
TTGATAAATCAACTACGGTT+AGG - Chr4:30973942-30973961 MsG0480019970.01.T01:three_prime_UTR 30.0%
TTGCTGAATTACAAAGGAAA+AGG - Chr4:30974685-30974704 MsG0480019970.01.T01:three_prime_UTR 30.0%
TTGTGGTTTCAAACAAGAAA+TGG - Chr4:30974458-30974477 MsG0480019970.01.T01:three_prime_UTR 30.0%
TTTAATTGCTAGATAGCTTC+TGG - Chr4:30980395-30980414 MsG0480019970.01.T01:intron 30.0%
! AAAGTATAAGGGACCAATTT+TGG + Chr4:30975134-30975153 None:intergenic 30.0%
! AAGAAGAAGAAAGCATAAAC+AGG + Chr4:30973470-30973489 None:intergenic 30.0%
! AGGATCATAGGAAAATCTTT+TGG - Chr4:30973544-30973563 MsG0480019970.01.T01:three_prime_UTR 30.0%
! AGTAAAACTGCTAAGTTTTG+AGG + Chr4:30980052-30980071 None:intergenic 30.0%
! ATCATGATGATGTTGATGTT+AGG - Chr4:30974833-30974852 MsG0480019970.01.T01:CDS 30.0%
! CTTTATTTATCGGCATATCA+TGG + Chr4:30978060-30978079 None:intergenic 30.0%
! CTTTCTTTACATGCATTTTC+TGG - Chr4:30979647-30979666 MsG0480019970.01.T01:intron 30.0%
! GATACAAATTAACTTGGCAA+AGG + Chr4:30980207-30980226 None:intergenic 30.0%
! GCCGATTTATATCTGTATTT+AGG - Chr4:30975861-30975880 MsG0480019970.01.T01:intron 30.0%
! TAAAATAAATGGAGTGTCCA+TGG + Chr4:30976150-30976169 None:intergenic 30.0%
! TTCTTCTTTTCAGATTGCTA+AGG - Chr4:30978989-30979008 MsG0480019970.01.T01:intron 30.0%
! TTGAATTGTGTTGTTAGCTA+TGG - Chr4:30976371-30976390 MsG0480019970.01.T01:intron 30.0%
! TTTTGTCACCAATTGAGTTA+GGG - Chr4:30975273-30975292 MsG0480019970.01.T01:intron 30.0%
!! AAAGCTTCCAAAGCTTTAAA+TGG + Chr4:30975066-30975085 None:intergenic 30.0%
!! AAGCTTTGGAAGCTTTAAAA+TGG - Chr4:30975070-30975089 MsG0480019970.01.T01:CDS 30.0%
!! ATAGGGCAGATATTTTGTTT+TGG - Chr4:30973855-30973874 MsG0480019970.01.T01:three_prime_UTR 30.0%
!! CAGTTTTACTTTTGTCCAAT+TGG - Chr4:30980062-30980081 MsG0480019970.01.T01:intron 30.0%
!! CTTACTTTTCTTTCAACTTC+GGG + Chr4:30977509-30977528 None:intergenic 30.0%
!! CTTTTAAAGGGAAGCAATAT+TGG + Chr4:30977893-30977912 None:intergenic 30.0%
!! GCTTACTTTTCTTTCAACTT+CGG + Chr4:30977510-30977529 None:intergenic 30.0%
!! TGAAAAAGTGTTAATGCTTC+AGG - Chr4:30978756-30978775 MsG0480019970.01.T01:intron 30.0%
!! TGATAAAAATTGCTTGCTGT+AGG - Chr4:30974294-30974313 MsG0480019970.01.T01:three_prime_UTR 30.0%
!! TGTTTTCTGGTAATAATCAC+AGG - Chr4:30978322-30978341 MsG0480019970.01.T01:intron 30.0%
!! TTAAAGAGCGTTTAATCTGA+AGG + Chr4:30974984-30975003 None:intergenic 30.0%
!! TTAGTTTTCAGACAGTAATC+AGG + Chr4:30977632-30977651 None:intergenic 30.0%
!!! ATTTTCTAGGATTAGAATGC+GGG + Chr4:30974504-30974523 None:intergenic 30.0%
!!! CATTTTCTAGGATTAGAATG+CGG + Chr4:30974505-30974524 None:intergenic 30.0%
!!! GGACACTCCATTTATTTTAT+AGG - Chr4:30976151-30976170 MsG0480019970.01.T01:intron 30.0%
!!! TTGATTTTTTTTTTGGAGGG+GGG - Chr4:30973519-30973538 MsG0480019970.01.T01:three_prime_UTR 30.0%
AAAGGGAAGCAATATTGGTA+CGG + Chr4:30977888-30977907 None:intergenic 35.0%
AAATACCAATCTTTCCCTCA+AGG + Chr4:30979783-30979802 None:intergenic 35.0%
ACAAGTTATTGTGCGATTTG+AGG - Chr4:30980299-30980318 MsG0480019970.01.T01:intron 35.0%
AGAAGAGCGAAGAAAACAAA+AGG - Chr4:30979055-30979074 MsG0480019970.01.T01:intron 35.0%
AGACTTCAATGAGACAATGA+AGG + Chr4:30974926-30974945 None:intergenic 35.0%
AGATTCCATTTGGCAAAAAC+AGG - Chr4:30974185-30974204 MsG0480019970.01.T01:three_prime_UTR 35.0%
AGGAAGAAGAAAGATTGACT+CGG - Chr4:30979021-30979040 MsG0480019970.01.T01:intron 35.0%
AGTATGAGTACCATGGATTT+GGG + Chr4:30979991-30980010 None:intergenic 35.0%
ATAGAGGTAGTCTTTGGTAT+TGG - Chr4:30973678-30973697 MsG0480019970.01.T01:three_prime_UTR 35.0%
ATCGTGATAAAGATCGAGAT+AGG - Chr4:30979129-30979148 MsG0480019970.01.T01:intron 35.0%
CAAACAAGAAATGGAATGGA+GGG - Chr4:30974467-30974486 MsG0480019970.01.T01:three_prime_UTR 35.0%
CAAGTTCATTTCTACGATTG+GGG + Chr4:30978614-30978633 None:intergenic 35.0%
CACAAGTTCATTTCTACGAT+TGG + Chr4:30978616-30978635 None:intergenic 35.0%
CCTAGAAAATGATAAGTCTG+TGG - Chr4:30974514-30974533 MsG0480019970.01.T01:three_prime_UTR 35.0%
CGTTTGATAAATCTTGGTAG+CGG - Chr4:30980537-30980556 MsG0480019970.01.T01:CDS 35.0%
GAATACTGAATGTTTGCGTA+AGG - Chr4:30973575-30973594 MsG0480019970.01.T01:three_prime_UTR 35.0%
GAATTGAACATTCATAGGAC+TGG - Chr4:30980163-30980182 MsG0480019970.01.T01:intron 35.0%
GACAAAACAATGAATGATGG+TGG - Chr4:30974798-30974817 MsG0480019970.01.T01:CDS 35.0%
GACTGGAAAATACAGGTATT+TGG - Chr4:30980180-30980199 MsG0480019970.01.T01:CDS 35.0%
GAGAGAGATAGTGAAGATTA+GGG - Chr4:30973772-30973791 MsG0480019970.01.T01:three_prime_UTR 35.0%
GGAAGTTTGTGGTTTCTATA+TGG - Chr4:30976569-30976588 MsG0480019970.01.T01:intron 35.0%
GGAGAAAATAAAGAACCTTC+TGG - Chr4:30978460-30978479 MsG0480019970.01.T01:intron 35.0%
GGTCCTTTCTTCAATTGATT+TGG - Chr4:30975641-30975660 MsG0480019970.01.T01:intron 35.0%
GTTACAAATGAGAATGAGGA+AGG - Chr4:30976723-30976742 MsG0480019970.01.T01:intron 35.0%
GTTCAGACATAGATTCCATT+TGG - Chr4:30974175-30974194 MsG0480019970.01.T01:three_prime_UTR 35.0%
TAGAGGTAGTCTTTGGTATT+GGG - Chr4:30973679-30973698 MsG0480019970.01.T01:three_prime_UTR 35.0%
TAGGCACAAAACACAAGAAA+TGG - Chr4:30974313-30974332 MsG0480019970.01.T01:three_prime_UTR 35.0%
TATCGAGAAATTCCACTACT+TGG + Chr4:30979356-30979375 None:intergenic 35.0%
TATTACCTTGAGGGAAAGAT+TGG - Chr4:30979775-30979794 MsG0480019970.01.T01:intron 35.0%
TCAAACAAGAAATGGAATGG+AGG - Chr4:30974466-30974485 MsG0480019970.01.T01:three_prime_UTR 35.0%
TGATTGTCATTGCTGCAAAA+GGG - Chr4:30979715-30979734 MsG0480019970.01.T01:intron 35.0%
TGCTAAGTAAATGGTGTTTG+AGG - Chr4:30973646-30973665 MsG0480019970.01.T01:three_prime_UTR 35.0%
TGTGTGTTTATTTCGTGCAA+AGG + Chr4:30975036-30975055 None:intergenic 35.0%
TGTTAATTTACTTCAGCCGT+AGG + Chr4:30974756-30974775 None:intergenic 35.0%
TTCATAGGACTGGAAAATAC+AGG - Chr4:30980173-30980192 MsG0480019970.01.T01:CDS 35.0%
TTGGATAGAAGAGTAAAACG+TGG - Chr4:30978353-30978372 MsG0480019970.01.T01:intron 35.0%
TTGGTTAATGTGTGCTTAGA+TGG - Chr4:30975660-30975679 MsG0480019970.01.T01:intron 35.0%
! AACTTCGGGTCATGTATTTT+CGG + Chr4:30977495-30977514 None:intergenic 35.0%
! AGTAATTGCTCTTTAGGTTC+TGG + Chr4:30974594-30974613 None:intergenic 35.0%
! ATTGTGCGATTTGAGGTAAT+TGG - Chr4:30980306-30980325 MsG0480019970.01.T01:intron 35.0%
! CCACAGACTTATCATTTTCT+AGG + Chr4:30974517-30974536 None:intergenic 35.0%
! CTGATGTTCTTCATGTTTTC+TGG - Chr4:30978309-30978328 MsG0480019970.01.T01:intron 35.0%
! CTTTTGTCACCAATTGAGTT+AGG - Chr4:30975272-30975291 MsG0480019970.01.T01:intron 35.0%
! GAATCAATCTTTTCAGCACA+AGG + Chr4:30975925-30975944 None:intergenic 35.0%
! GATGATGATGATGATGATGA+TGG - Chr4:30974866-30974885 MsG0480019970.01.T01:CDS 35.0%
! TATTGTCTTATTGGCAAAGC+CGG - Chr4:30973390-30973409 MsG0480019970.01.T01:three_prime_UTR 35.0%
! TCACGGGATATTTTTCTTTC+AGG - Chr4:30978687-30978706 MsG0480019970.01.T01:intron 35.0%
! TTTTCAGATTGCTAAGGAGA+AGG - Chr4:30978995-30979014 MsG0480019970.01.T01:intron 35.0%
!! AAACAATGAATGATGGTGGT+TGG - Chr4:30974802-30974821 MsG0480019970.01.T01:CDS 35.0%
!! AAGTTGATATAAACCAGCAC+AGG - Chr4:30979859-30979878 MsG0480019970.01.T01:intron 35.0%
!! CAGTTTTGTGAGAAATTGGT+AGG - Chr4:30978228-30978247 MsG0480019970.01.T01:intron 35.0%
!! GAGTGTTAAATTTGGTGTTC+AGG - Chr4:30980344-30980363 MsG0480019970.01.T01:intron 35.0%
!! GCGAATCTTTGACTTTTTGT+TGG - Chr4:30977111-30977130 MsG0480019970.01.T01:intron 35.0%
!! GGAAAATCTTTTGGTTACGT+TGG - Chr4:30973553-30973572 MsG0480019970.01.T01:three_prime_UTR 35.0%
!! TGCTCAGTTTTGTGAGAAAT+TGG - Chr4:30978224-30978243 MsG0480019970.01.T01:intron 35.0%
!! TTAACTGTGATAGCTTTGGT+TGG - Chr4:30977421-30977440 MsG0480019970.01.T01:CDS 35.0%
!! TTGGTGTTGAGACATATTTG+TGG - Chr4:30974441-30974460 MsG0480019970.01.T01:three_prime_UTR 35.0%
!!! AAAACTGCTAAGTTTTGAGG+TGG + Chr4:30980049-30980068 None:intergenic 35.0%
!!! CTCGCTCATTTTTATTTTCG+TGG + Chr4:30980609-30980628 None:intergenic 35.0%
!!! GATGGTTTACTCTTGTTTTG+AGG - Chr4:30979738-30979757 MsG0480019970.01.T01:intron 35.0%
!!! TAGTGTTTTTGGGCCAAAAT+TGG - Chr4:30975118-30975137 MsG0480019970.01.T01:CDS 35.0%
!!! TTGTTTTTGGGACTCATATG+TGG - Chr4:30975807-30975826 MsG0480019970.01.T01:intron 35.0%
AAAAAGAGGGATAGAGCGAA+AGG - Chr4:30976243-30976262 MsG0480019970.01.T01:CDS 40.0%
AAGGTAGAGGTAATCGAGAT+CGG - Chr4:30979207-30979226 MsG0480019970.01.T01:intron 40.0%
AATGCTTCAGGAGAAGAAGA+TGG - Chr4:30978768-30978787 MsG0480019970.01.T01:intron 40.0%
ACAGCTCAAACAAGAGAAGA+TGG + Chr4:30980687-30980706 None:intergenic 40.0%
ACGAGAACGTCTTAATCAAG+AGG - Chr4:30978376-30978395 MsG0480019970.01.T01:intron 40.0%
ACTGAGGGTGAGAAAGTTAA+GGG - Chr4:30973608-30973627 MsG0480019970.01.T01:three_prime_UTR 40.0%
ACTTGACTGAGGAAGAAAGA+AGG - Chr4:30976517-30976536 MsG0480019970.01.T01:intron 40.0%
AGAAATGGAATGGAGGGTTT+AGG - Chr4:30974473-30974492 MsG0480019970.01.T01:three_prime_UTR 40.0%
AGAACGTCTTAATCAAGAGG+TGG - Chr4:30978379-30978398 MsG0480019970.01.T01:intron 40.0%
AGAGATAGTGAAGATTAGGG+AGG - Chr4:30973775-30973794 MsG0480019970.01.T01:three_prime_UTR 40.0%
AGCTGAAGCTCTTATGAGAA+AGG - Chr4:30978523-30978542 MsG0480019970.01.T01:intron 40.0%
AGGTTGAGGAACGGAAAAAA+TGG - Chr4:30979247-30979266 MsG0480019970.01.T01:intron 40.0%
AGTGCTTCAATTCAAGGACT+AGG + Chr4:30975340-30975359 None:intergenic 40.0%
ATCAAATCGCCACGCAAAAA+TGG + Chr4:30974226-30974245 None:intergenic 40.0%
ATGAGAATGAGGAAGGACTT+TGG - Chr4:30976730-30976749 MsG0480019970.01.T01:intron 40.0%
ATTAATGGAGAAAAGGGTCG+AGG - Chr4:30979531-30979550 MsG0480019970.01.T01:intron 40.0%
ATTCACGAGAATCTCAGTCA+CGG + Chr4:30978659-30978678 None:intergenic 40.0%
ATTCCGTACGAGTTACCAAT+TGG + Chr4:30980080-30980099 None:intergenic 40.0%
CAAAAAGTCAAAGATTCGCC+AGG + Chr4:30977110-30977129 None:intergenic 40.0%
CAACTAAATCAAACAGACGG+CGG + Chr4:30973922-30973941 None:intergenic 40.0%
CAGCATTTATAAACCTGTGC+TGG + Chr4:30979875-30979894 None:intergenic 40.0%
CATGTGAATCAAACCATTGG+AGG + Chr4:30975217-30975236 None:intergenic 40.0%
CTCACAAAACTGAGCAAGAT+CGG + Chr4:30978220-30978239 None:intergenic 40.0%
CTGGTAATAATCACAGGTGA+TGG - Chr4:30978328-30978347 MsG0480019970.01.T01:intron 40.0%
CTTGACTGAGGAAGAAAGAA+GGG - Chr4:30976518-30976537 MsG0480019970.01.T01:intron 40.0%
GAAAAAATGGAAGCAGAGAC+AGG - Chr4:30979260-30979279 MsG0480019970.01.T01:intron 40.0%
GAAAGATCTCGGGAATATGA+AGG - Chr4:30979188-30979207 MsG0480019970.01.T01:intron 40.0%
GAAATGGAATGGAGGGTTTA+GGG - Chr4:30974474-30974493 MsG0480019970.01.T01:three_prime_UTR 40.0%
GAACATCAGCATACAAGCAA+AGG + Chr4:30978298-30978317 None:intergenic 40.0%
GAATCTATGTCTGAACACAC+AGG + Chr4:30974171-30974190 None:intergenic 40.0%
GAATGTTTGCGTAAGGAGTA+TGG - Chr4:30973582-30973601 MsG0480019970.01.T01:three_prime_UTR 40.0%
GACACAAGTGCTTCAATTCA+AGG + Chr4:30975346-30975365 None:intergenic 40.0%
GAGATAGTGAAGATTAGGGA+GGG - Chr4:30973776-30973795 MsG0480019970.01.T01:three_prime_UTR 40.0%
GAGTATGAGTACCATGGATT+TGG + Chr4:30979992-30980011 None:intergenic 40.0%
GATTGTCATTGCTGCAAAAG+GGG - Chr4:30979716-30979735 MsG0480019970.01.T01:intron 40.0%
GCAAAAACAGGTTCTGTTGA+AGG - Chr4:30974197-30974216 MsG0480019970.01.T01:three_prime_UTR 40.0%
GGAGAGAGATAGTGAAGATT+AGG - Chr4:30973771-30973790 MsG0480019970.01.T01:three_prime_UTR 40.0%
GGGTTACAAAGAAGTGAGTT+GGG - Chr4:30976539-30976558 MsG0480019970.01.T01:intron 40.0%
GGTCATGTGAATCAAACCAT+TGG + Chr4:30975220-30975239 None:intergenic 40.0%
GTAGTGTGATATTGCATCCA+TGG - Chr4:30976966-30976985 MsG0480019970.01.T01:intron 40.0%
GTCATTGAACTACACTCTGA+AGG - Chr4:30979914-30979933 MsG0480019970.01.T01:intron 40.0%
GTGATTGTCATTGCTGCAAA+AGG - Chr4:30979714-30979733 MsG0480019970.01.T01:intron 40.0%
GTTAAGCTATCTTAGTGCTG+TGG - Chr4:30977720-30977739 MsG0480019970.01.T01:intron 40.0%
GTTAATGTGTGCTTAGATGG+TGG - Chr4:30975663-30975682 MsG0480019970.01.T01:intron 40.0%
TAACGTGTTTAAACCGATGC+AGG - Chr4:30977462-30977481 MsG0480019970.01.T01:intron 40.0%
TACCAACTGAGCTATGTTCA+CGG + Chr4:30976008-30976027 None:intergenic 40.0%
TAGCGGTCATAAGCATACTT+TGG - Chr4:30980554-30980573 MsG0480019970.01.T01:CDS 40.0%
TAGGTACAGAGATAGAGACT+CGG - Chr4:30979160-30979179 MsG0480019970.01.T01:intron 40.0%
TAGTCGATAGAGGTAGTCTT+TGG - Chr4:30973672-30973691 MsG0480019970.01.T01:three_prime_UTR 40.0%
TATACACAAGGAAAAGGGTG+TGG + Chr4:30978563-30978582 None:intergenic 40.0%
TCTGTGTTGAGCTGTAAAGT+TGG - Chr4:30973275-30973294 MsG0480019970.01.T01:three_prime_UTR 40.0%
TGAATCAAACCATTGGAGGA+GGG + Chr4:30975213-30975232 None:intergenic 40.0%
TGAGAATGAGGAAGGACTTT+GGG - Chr4:30976731-30976750 MsG0480019970.01.T01:intron 40.0%
TGAGATGAATTCTAGTCACG+AGG - Chr4:30976093-30976112 MsG0480019970.01.T01:intron 40.0%
TGCATTATTATATGCAGGGC+CGG - Chr4:30976035-30976054 MsG0480019970.01.T01:intron 40.0%
TGGCCCAAAAACACTAAGTA+TGG + Chr4:30975114-30975133 None:intergenic 40.0%
TTAGGCATTTCCCAAATCCA+TGG - Chr4:30979978-30979997 MsG0480019970.01.T01:intron 40.0%
TTCTTCTTCAAGGCTTCATC+AGG - Chr4:30973482-30973501 MsG0480019970.01.T01:three_prime_UTR 40.0%
TTGAATCTCTTGGTGAAGCT+GGG - Chr4:30978489-30978508 MsG0480019970.01.T01:intron 40.0%
TTGACTGAGGAAGAAAGAAG+GGG - Chr4:30976519-30976538 MsG0480019970.01.T01:intron 40.0%
TTGTGTTAAGACTGCCTTCT+CGG + Chr4:30978728-30978747 None:intergenic 40.0%
! AAGTGAATAAGTGAGGTGTC+CGG + Chr4:30976071-30976090 None:intergenic 40.0%
! AATTGGTAACTCGTACGGAA+TGG - Chr4:30980079-30980098 MsG0480019970.01.T01:intron 40.0%
! ACGGAGTGTTTCAAGTGATA+GGG - Chr4:30979100-30979119 MsG0480019970.01.T01:intron 40.0%
! ACTTCGGGTCATGTATTTTC+GGG + Chr4:30977494-30977513 None:intergenic 40.0%
! AGAAAGCATGGAGGGTAAAA+TGG + Chr4:30975241-30975260 None:intergenic 40.0%
! ATGGTTTCTAGGTTGAGGAA+CGG - Chr4:30979238-30979257 MsG0480019970.01.T01:intron 40.0%
! ATTTTACCCTCCATGCTTTC+TGG - Chr4:30975240-30975259 MsG0480019970.01.T01:CDS 40.0%
! CGGGATATTTTTCTTTCAGG+TGG - Chr4:30978690-30978709 MsG0480019970.01.T01:intron 40.0%
! CTGGAACAAGTTGAATCTCT+TGG - Chr4:30978479-30978498 MsG0480019970.01.T01:intron 40.0%
! GAATTGAAGCACTTGTGTCA+TGG - Chr4:30975347-30975366 MsG0480019970.01.T01:intron 40.0%
! GAGATTCAACTTGTTCCAGA+AGG + Chr4:30978478-30978497 None:intergenic 40.0%
! GCAAGATCGGCTTCAAATTT+AGG + Chr4:30978207-30978226 None:intergenic 40.0%
! GGAAGAAGAAAGATTGACTC+GGG - Chr4:30979022-30979041 MsG0480019970.01.T01:intron 40.0%
! GGACACTTGCTGAATTACAA+AGG - Chr4:30974679-30974698 MsG0480019970.01.T01:three_prime_UTR 40.0%
! GTGTTGCTCTTCTATCTATG+TGG - Chr4:30977698-30977717 MsG0480019970.01.T01:intron 40.0%
! TCTTCTCTTGTTTGAGCTGT+TGG - Chr4:30980687-30980706 MsG0480019970.01.T01:CDS 40.0%
! TCTTTGGTATTGGGTGTTGT+TGG - Chr4:30973688-30973707 MsG0480019970.01.T01:three_prime_UTR 40.0%
! TGTCCAATTGGTAACTCGTA+CGG - Chr4:30980074-30980093 MsG0480019970.01.T01:intron 40.0%
! TTTGAGGTGTTAGTCGATAG+AGG - Chr4:30973662-30973681 MsG0480019970.01.T01:three_prime_UTR 40.0%
!! AAGAGCGTTTAATCTGAAGG+AGG + Chr4:30974981-30975000 None:intergenic 40.0%
!! AAGATTGACTCGGGAAAAAG+AGG - Chr4:30979031-30979050 MsG0480019970.01.T01:intron 40.0%
!! AGTATGTTTTTGCTTGCGTG+GGG - Chr4:30973965-30973984 MsG0480019970.01.T01:three_prime_UTR 40.0%
!! ATAATCACAGGTGATGGACT+TGG - Chr4:30978334-30978353 MsG0480019970.01.T01:intron 40.0%
!! GAGTATGTTTTTGCTTGCGT+GGG - Chr4:30973964-30973983 MsG0480019970.01.T01:three_prime_UTR 40.0%
!! GATGATGATGATGATGATGG+TGG - Chr4:30974869-30974888 MsG0480019970.01.T01:CDS 40.0%
!! GTTGAGCTGTAAAGTTGGTA+AGG - Chr4:30973280-30973299 MsG0480019970.01.T01:three_prime_UTR 40.0%
!! TCAGATTTTTCAGCTGTCAG+TGG + Chr4:30978422-30978441 None:intergenic 40.0%
!! TCTCAAGAAAGCTCTGAGAT+GGG + Chr4:30979484-30979503 None:intergenic 40.0%
!! TGGTATGATTGTTGGGTTGA+CGG - Chr4:30973875-30973894 MsG0480019970.01.T01:three_prime_UTR 40.0%
!! TTCAGTAGATCGGTTTTGTG+TGG - Chr4:30975447-30975466 MsG0480019970.01.T01:CDS 40.0%
!! TTGCTCTTTAGGTTCTGGAT+TGG + Chr4:30974589-30974608 None:intergenic 40.0%
!!! CAGAACCTGTTTTTGCCAAA+TGG + Chr4:30974193-30974212 None:intergenic 40.0%
!!! GGTTCTTTATTTTCTCCTCC+AGG + Chr4:30978457-30978476 None:intergenic 40.0%
!!! TCAGTTTTGAGAATTCCCCA+AGG - Chr4:30978166-30978185 MsG0480019970.01.T01:intron 40.0%
!!! TTTTTGGGACTCATATGTGG+TGG - Chr4:30975810-30975829 MsG0480019970.01.T01:intron 40.0%
AAGAACCAAGTGACCACCAA+AGG + Chr4:30973423-30973442 None:intergenic 45.0%
AAGGTCTCGTTCTTGTACCT+GGG - Chr4:30973299-30973318 MsG0480019970.01.T01:three_prime_UTR 45.0%
ACAATAGAGCAACCATGTGC+AGG + Chr4:30978010-30978029 None:intergenic 45.0%
ACCAACTGAGCTATGTTCAC+GGG + Chr4:30976007-30976026 None:intergenic 45.0%
ACTAGGAGGACCAATGACAA+GGG + Chr4:30975323-30975342 None:intergenic 45.0%
ACTCGGATCGTGAAAGATCT+CGG - Chr4:30979177-30979196 MsG0480019970.01.T01:intron 45.0%
ACTGTCATTGAACTGGGCTT+TGG - Chr4:30980250-30980269 MsG0480019970.01.T01:CDS 45.0%
AGGATCCTGAGAGAAAGAGA+CGG - Chr4:30979081-30979100 MsG0480019970.01.T01:intron 45.0%
AGGTAGAGGTAATCGAGATC+GGG - Chr4:30979208-30979227 MsG0480019970.01.T01:intron 45.0%
ATAGTGAAGATTAGGGAGGG+TGG - Chr4:30973779-30973798 MsG0480019970.01.T01:three_prime_UTR 45.0%
ATCTGAACAGTTGTCTGTCC+TGG - Chr4:30978436-30978455 MsG0480019970.01.T01:intron 45.0%
ATGGGTAGCATACGCTCAAA+AGG + Chr4:30977790-30977809 None:intergenic 45.0%
CATTATTATATGCAGGGCCG+GGG - Chr4:30976037-30976056 MsG0480019970.01.T01:intron 45.0%
CCACTTGTATGTTTGGGCAT+CGG - Chr4:30975839-30975858 MsG0480019970.01.T01:intron 45.0%
CGATGCCCAAACATACAAGT+GGG + Chr4:30975841-30975860 None:intergenic 45.0%
CTGTCATTGAACTGGGCTTT+GGG - Chr4:30980251-30980270 MsG0480019970.01.T01:CDS 45.0%
CTTCTGGACATGATATGTGC+AGG - Chr4:30980411-30980430 MsG0480019970.01.T01:intron 45.0%
GAATCAAACCATTGGAGGAG+GGG + Chr4:30975212-30975231 None:intergenic 45.0%
GAATGAGGATGGCAACAGAT+AGG + Chr4:30978257-30978276 None:intergenic 45.0%
GACCACCAAAGGATAGAAAC+CGG + Chr4:30973412-30973431 None:intergenic 45.0%
GACTGAGGGTGAGAAAGTTA+AGG - Chr4:30973607-30973626 MsG0480019970.01.T01:three_prime_UTR 45.0%
GATTGCTAAGGAGAAGGCTA+AGG - Chr4:30979001-30979020 MsG0480019970.01.T01:intron 45.0%
GCATTATTATATGCAGGGCC+GGG - Chr4:30976036-30976055 MsG0480019970.01.T01:intron 45.0%
GCGAAGAAAACAAAAGGAGC+AGG - Chr4:30979061-30979080 MsG0480019970.01.T01:intron 45.0%
GCTTCAATTCAAGGACTAGG+AGG + Chr4:30975337-30975356 None:intergenic 45.0%
GGAGACACTTAATACCGAGA+AGG - Chr4:30978711-30978730 MsG0480019970.01.T01:intron 45.0%
GGGGTTACAAAGAAGTGAGT+TGG - Chr4:30976538-30976557 MsG0480019970.01.T01:intron 45.0%
GGGTCAATATGTTGGACTCT+TGG - Chr4:30973237-30973256 MsG0480019970.01.T01:three_prime_UTR 45.0%
GGTATGTGGTTCGTTTCTTG+TGG - Chr4:30978801-30978820 MsG0480019970.01.T01:intron 45.0%
GTAAATAACCGCGTCGTGAT+GGG - Chr4:30980433-30980452 MsG0480019970.01.T01:intron 45.0%
GTAACCTACACCAGAAAGCA+TGG + Chr4:30975253-30975272 None:intergenic 45.0%
GTGAATCAAACCATTGGAGG+AGG + Chr4:30975214-30975233 None:intergenic 45.0%
GTTGAATCTCTTGGTGAAGC+TGG - Chr4:30978488-30978507 MsG0480019970.01.T01:intron 45.0%
GTTGTGTTTGCTCCAAGTAG+TGG - Chr4:30979341-30979360 MsG0480019970.01.T01:intron 45.0%
TAAGGAGGCCCTAACTCAAT+TGG + Chr4:30975284-30975303 None:intergenic 45.0%
TAAGGTCTCGTTCTTGTACC+TGG - Chr4:30973298-30973317 MsG0480019970.01.T01:three_prime_UTR 45.0%
TACCAAATATGCTCCACGAG+AGG + Chr4:30975510-30975529 None:intergenic 45.0%
TACTGTGTCAGTGTCAACCT+AGG - Chr4:30977010-30977029 MsG0480019970.01.T01:intron 45.0%
TCGAGCCCACTTGTATGTTT+GGG - Chr4:30975833-30975852 MsG0480019970.01.T01:intron 45.0%
TCTATGTCTGAACACACAGG+CGG + Chr4:30974168-30974187 None:intergenic 45.0%
TCTCGGGAATATGAAGGTAG+AGG - Chr4:30979194-30979213 MsG0480019970.01.T01:intron 45.0%
TGACTGTTCAATTGGGGCTA+TGG - Chr4:30977833-30977852 MsG0480019970.01.T01:intron 45.0%
TGGGACGATAAGGAAGTTTG+TGG - Chr4:30976558-30976577 MsG0480019970.01.T01:intron 45.0%
TGTTGACGAAGAGATCGTGA+GGG + Chr4:30976605-30976624 None:intergenic 45.0%
TTCAGCTCGAAACTTGACTG+AGG - Chr4:30976506-30976525 MsG0480019970.01.T01:intron 45.0%
TTCCACATTTGTTCCTCTCG+TGG - Chr4:30975494-30975513 MsG0480019970.01.T01:CDS 45.0%
TTCCTCTCGTGGAGCATATT+TGG - Chr4:30975505-30975524 MsG0480019970.01.T01:CDS 45.0%
TTGGTACGGTGCACTTCTAA+TGG + Chr4:30977874-30977893 None:intergenic 45.0%
! AGAAGTGAGTTGGGACGATA+AGG - Chr4:30976548-30976567 MsG0480019970.01.T01:intron 45.0%
! AGATGGTGTTGAGAAAGGTG+GGG - Chr4:30973831-30973850 MsG0480019970.01.T01:three_prime_UTR 45.0%
! CAAAGCCGGTTTCTATCCTT+TGG - Chr4:30973404-30973423 MsG0480019970.01.T01:three_prime_UTR 45.0%
! CAGATGGTGTTGAGAAAGGT+GGG - Chr4:30973830-30973849 MsG0480019970.01.T01:three_prime_UTR 45.0%
! CATAAACAGGAAGTGCAGTC+AGG + Chr4:30973457-30973476 None:intergenic 45.0%
! CGATCGATTTATCGAGTGAG+TGG + Chr4:30976465-30976484 None:intergenic 45.0%
! GACGGAGTGTTTCAAGTGAT+AGG - Chr4:30979099-30979118 MsG0480019970.01.T01:intron 45.0%
! TAAGGAGTATGGAGGACTGA+GGG - Chr4:30973593-30973612 MsG0480019970.01.T01:three_prime_UTR 45.0%
! TCTATCCTTTGGTGGTCACT+TGG - Chr4:30973415-30973434 MsG0480019970.01.T01:three_prime_UTR 45.0%
! TGAGCAGATGGTGTTGAGAA+AGG - Chr4:30973826-30973845 MsG0480019970.01.T01:three_prime_UTR 45.0%
! TGTTTGCGTAAGGAGTATGG+AGG - Chr4:30973585-30973604 MsG0480019970.01.T01:three_prime_UTR 45.0%
!! CGGTCTTGGATCGATTTTGA+TGG - Chr4:30975547-30975566 MsG0480019970.01.T01:CDS 45.0%
!! GACTTTGGGTCCGTTTTGAT+TGG - Chr4:30976745-30976764 MsG0480019970.01.T01:intron 45.0%
!! GATGATGATGATGATGGTGG+TGG - Chr4:30974872-30974891 MsG0480019970.01.T01:CDS 45.0%
!! GATTTTTCAGCTGTCAGTGG+TGG + Chr4:30978419-30978438 None:intergenic 45.0%
!! GGAGTATGTTTTTGCTTGCG+TGG - Chr4:30973963-30973982 MsG0480019970.01.T01:three_prime_UTR 45.0%
!! GGCACCGGTTTAGAAGATAT+AGG - Chr4:30979935-30979954 MsG0480019970.01.T01:intron 45.0%
!! GTATGTTTTTGCTTGCGTGG+GGG - Chr4:30973966-30973985 MsG0480019970.01.T01:three_prime_UTR 45.0%
!! GTCTCAAGAAAGCTCTGAGA+TGG + Chr4:30979485-30979504 None:intergenic 45.0%
!! TGAAGGTCTCCATTTTTGCG+TGG - Chr4:30974214-30974233 MsG0480019970.01.T01:three_prime_UTR 45.0%
!! TTCGTGCAAAGGAGTGTTGA+AGG + Chr4:30975025-30975044 None:intergenic 45.0%
!!! TTGGATCGATTTTGATGGCG+TGG - Chr4:30975552-30975571 MsG0480019970.01.T01:CDS 45.0%
!!! TTTTGATGGCGTGGATTCTC+AGG - Chr4:30975561-30975580 MsG0480019970.01.T01:CDS 45.0%
!!! TTTTTTTTTGGAGGGGGGTG+AGG - Chr4:30973524-30973543 MsG0480019970.01.T01:three_prime_UTR 45.0%
AACGTGATCTGCTCCGATTG+TGG + Chr4:30979288-30979307 None:intergenic 50.0%
AAGAGGGATAGAGCGAAAGG+AGG - Chr4:30976246-30976265 MsG0480019970.01.T01:CDS 50.0%
AAGGAGCAAGAAGGCTAAGG+AGG + Chr4:30975299-30975318 None:intergenic 50.0%
AAGGAGGGGAAGCTTGGATT+TGG - Chr4:30973989-30974008 MsG0480019970.01.T01:three_prime_UTR 50.0%
ACACTCCGTCTCTTTCTCTC+AGG + Chr4:30979089-30979108 None:intergenic 50.0%
AGAACTCAGTCTCATGTCGC+AGG - Chr4:30978841-30978860 MsG0480019970.01.T01:intron 50.0%
AGGTAATCGAGATCGGGGAA+GGG - Chr4:30979214-30979233 MsG0480019970.01.T01:intron 50.0%
AGGTAGTCAATCCCGGATAG+CGG + Chr4:30977306-30977325 None:intergenic 50.0%
AGGTCTCGTTCTTGTACCTG+GGG - Chr4:30973300-30973319 MsG0480019970.01.T01:three_prime_UTR 50.0%
ATCGAGATAGGCAGCGTGAT+AGG - Chr4:30979141-30979160 MsG0480019970.01.T01:intron 50.0%
ATCTCTTGGTGAAGCTGGGA+AGG - Chr4:30978493-30978512 MsG0480019970.01.T01:intron 50.0%
ATGGAGAAAAGGGTCGAGGT+AGG - Chr4:30979535-30979554 MsG0480019970.01.T01:intron 50.0%
ATGGCACTCTGTGAGGTATG+TGG - Chr4:30978787-30978806 MsG0480019970.01.T01:intron 50.0%
CACGTATGCATCATGCCTTG+GGG + Chr4:30978184-30978203 None:intergenic 50.0%
CACTATCTCTCTCCACCACA+TGG + Chr4:30973765-30973784 None:intergenic 50.0%
CAGCCTGAGGGAAATTGCAA+CGG - Chr4:30977066-30977085 MsG0480019970.01.T01:intron 50.0%
CAGTCTACCTTCTCAAGTCC+TGG - Chr4:30974084-30974103 MsG0480019970.01.T01:three_prime_UTR 50.0%
CCGATGCCCAAACATACAAG+TGG + Chr4:30975842-30975861 None:intergenic 50.0%
CCTGGCAAAACCCAAAGTAG+CGG - Chr4:30977041-30977060 MsG0480019970.01.T01:intron 50.0%
CGGCGGAAATGCACACTAAA+CGG + Chr4:30973905-30973924 None:intergenic 50.0%
CTATCCGGGATTGACTACCT+AGG - Chr4:30977306-30977325 MsG0480019970.01.T01:intron 50.0%
CTATGTCTGAACACACAGGC+GGG + Chr4:30974167-30974186 None:intergenic 50.0%
CTCAAGTCCTGGATCCTTCA+GGG - Chr4:30974095-30974114 MsG0480019970.01.T01:three_prime_UTR 50.0%
CTCCACGAGAGGAACAAATG+TGG + Chr4:30975499-30975518 None:intergenic 50.0%
CTCGGATCGTGAAAGATCTC+GGG - Chr4:30979178-30979197 MsG0480019970.01.T01:intron 50.0%
CTTGTGCTATGCTGTGCTGT+GGG + Chr4:30976286-30976305 None:intergenic 50.0%
GAAGAAGATGGCACTCTGTG+AGG - Chr4:30978780-30978799 MsG0480019970.01.T01:intron 50.0%
GAAGGATCCAGGACTTGAGA+AGG + Chr4:30974094-30974113 None:intergenic 50.0%
GACACCTAGGTAGTCAATCC+CGG + Chr4:30977313-30977332 None:intergenic 50.0%
GACTAGGAGGACCAATGACA+AGG + Chr4:30975324-30975343 None:intergenic 50.0%
GCACGTATGCATCATGCCTT+GGG + Chr4:30978185-30978204 None:intergenic 50.0%
GCAGAGACAGGTACCACAAT+CGG - Chr4:30979272-30979291 MsG0480019970.01.T01:intron 50.0%
GGTAAATAACCGCGTCGTGA+TGG - Chr4:30980432-30980451 MsG0480019970.01.T01:intron 50.0%
GGTAGAGGTAATCGAGATCG+GGG - Chr4:30979209-30979228 MsG0480019970.01.T01:intron 50.0%
GTACTCTGTGTCAGCTAGTG+CGG - Chr4:30975527-30975546 MsG0480019970.01.T01:CDS 50.0%
GTCATTGCTGCAAAAGGGGA+TGG - Chr4:30979720-30979739 MsG0480019970.01.T01:intron 50.0%
GTCGAGCCCACTTGTATGTT+TGG - Chr4:30975832-30975851 MsG0480019970.01.T01:intron 50.0%
GTGGGAGGAGGAGATGTTAA+CGG - Chr4:30974029-30974048 MsG0480019970.01.T01:three_prime_UTR 50.0%
GTTGAGAAAGGTGGGGGATA+GGG - Chr4:30973838-30973857 MsG0480019970.01.T01:three_prime_UTR 50.0%
GTTGGACTCTTGGTTGAGTG+AGG - Chr4:30973247-30973266 MsG0480019970.01.T01:three_prime_UTR 50.0%
TCAACCTAGGCAGTCAATCC+TGG - Chr4:30977023-30977042 MsG0480019970.01.T01:intron 50.0%
TCAAGTCCTGGATCCTTCAG+GGG - Chr4:30974096-30974115 MsG0480019970.01.T01:three_prime_UTR 50.0%
TCCCAAAACAACAACCGACG+CGG + Chr4:30973344-30973363 None:intergenic 50.0%
TCCCGTGAACATAGCTCAGT+TGG - Chr4:30976003-30976022 MsG0480019970.01.T01:intron 50.0%
TCTCAAGTCCTGGATCCTTC+AGG - Chr4:30974094-30974113 MsG0480019970.01.T01:three_prime_UTR 50.0%
TCTCCGTTGCAATTTCCCTC+AGG + Chr4:30977072-30977091 None:intergenic 50.0%
TCTTGTGCTATGCTGTGCTG+TGG + Chr4:30976287-30976306 None:intergenic 50.0%
TGAACAGTTGTCTGTCCTGG+AGG - Chr4:30978439-30978458 MsG0480019970.01.T01:intron 50.0%
TGAGGATGGCAACAGATAGG+TGG + Chr4:30978254-30978273 None:intergenic 50.0%
TGAGGGAAATTGCAACGGAG+AGG - Chr4:30977071-30977090 MsG0480019970.01.T01:intron 50.0%
TGTTGAGAAAGGTGGGGGAT+AGG - Chr4:30973837-30973856 MsG0480019970.01.T01:three_prime_UTR 50.0%
TTCGCCAAATTCGCCCTAGT+CGG + Chr4:30975412-30975431 None:intergenic 50.0%
TTGCTCCTTGCCCTTGTCAT+TGG - Chr4:30975310-30975329 MsG0480019970.01.T01:intron 50.0%
TTGTACCTGGGGTTGCCTAT+TGG - Chr4:30973311-30973330 MsG0480019970.01.T01:three_prime_UTR 50.0%
TTTGCCAGGATTGACTGCCT+AGG + Chr4:30977030-30977049 None:intergenic 50.0%
! AAGGTGGTCTGAAATCGCGA+CGG - Chr4:30975620-30975639 MsG0480019970.01.T01:intron 50.0%
! ACCTACACCAGAAAGCATGG+AGG + Chr4:30975250-30975269 None:intergenic 50.0%
! AGCCGGTTTCTATCCTTTGG+TGG - Chr4:30973407-30973426 MsG0480019970.01.T01:three_prime_UTR 50.0%
! AGGGGATGGTTTCTAGGTTG+AGG - Chr4:30979233-30979252 MsG0480019970.01.T01:intron 50.0%
! CCTACACCAGAAAGCATGGA+GGG + Chr4:30975249-30975268 None:intergenic 50.0%
! GAACTACACTCTGAAGGCAC+CGG - Chr4:30979920-30979939 MsG0480019970.01.T01:intron 50.0%
! GATGGTGTTGAGAAAGGTGG+GGG - Chr4:30973832-30973851 MsG0480019970.01.T01:three_prime_UTR 50.0%
! GCAGATGGTGTTGAGAAAGG+TGG - Chr4:30973829-30973848 MsG0480019970.01.T01:three_prime_UTR 50.0%
! GCAGCATGTTGGCTATGGTA+TGG - Chr4:30978867-30978886 MsG0480019970.01.T01:intron 50.0%
! GGAAAGCAGCATGTTGGCTA+TGG - Chr4:30978862-30978881 MsG0480019970.01.T01:intron 50.0%
! GTAAGGAGTATGGAGGACTG+AGG - Chr4:30973592-30973611 MsG0480019970.01.T01:three_prime_UTR 50.0%
! GTGTTGACGAAGAGATCGTG+AGG + Chr4:30976606-30976625 None:intergenic 50.0%
! GTTGGTGGGGGTCAATATGT+TGG - Chr4:30973229-30973248 MsG0480019970.01.T01:three_prime_UTR 50.0%
! TCAGGCTGATCCGCTACTTT+GGG + Chr4:30977054-30977073 None:intergenic 50.0%
! TCGTGATCGTTTGCCGACTA+GGG - Chr4:30975396-30975415 MsG0480019970.01.T01:intron 50.0%
! TGCATGGTAGGTTGGAGGAT+GGG - Chr4:30973726-30973745 MsG0480019970.01.T01:three_prime_UTR 50.0%
! TTCGTGATCGTTTGCCGACT+AGG - Chr4:30975395-30975414 MsG0480019970.01.T01:intron 50.0%
! TTGTTTCTCCCATCACGACG+CGG + Chr4:30980444-30980463 None:intergenic 50.0%
! TTTGCCGACTAGGGCGAATT+TGG - Chr4:30975405-30975424 MsG0480019970.01.T01:intron 50.0%
! TTTTCAGCTGTCAGTGGTGG+CGG + Chr4:30978416-30978435 None:intergenic 50.0%
!! AAAGTAGCGGATCAGCCTGA+GGG - Chr4:30977054-30977073 MsG0480019970.01.T01:intron 50.0%
!! AAGCTTGGATTTGGTGGAGG+AGG - Chr4:30973998-30974017 MsG0480019970.01.T01:three_prime_UTR 50.0%
!! GATGATGATGATGGTGGTGG+TGG - Chr4:30974875-30974894 MsG0480019970.01.T01:CDS 50.0%
!! GATTTGGTGGAGGAGGTTGT+GGG - Chr4:30974005-30974024 MsG0480019970.01.T01:three_prime_UTR 50.0%
!! GGGTGGTTGATTTGAGCAGA+TGG - Chr4:30973814-30973833 MsG0480019970.01.T01:three_prime_UTR 50.0%
!! GGTATTGGGTGTTGTTGGCA+CGG - Chr4:30973693-30973712 MsG0480019970.01.T01:three_prime_UTR 50.0%
!!! ATCCGCGTCGGTTGTTGTTT+TGG - Chr4:30973339-30973358 MsG0480019970.01.T01:three_prime_UTR 50.0%
!!! TCCGCGTCGGTTGTTGTTTT+GGG - Chr4:30973340-30973359 MsG0480019970.01.T01:three_prime_UTR 50.0%
ACGAACTGAGTACCCCCTGA+AGG + Chr4:30974112-30974131 None:intergenic 55.0%
AGAGGATTTCGTCGCGATCC+TGG - Chr4:30977089-30977108 MsG0480019970.01.T01:intron 55.0%
AGCTCTCCTCGACGAACTCA+TGG - Chr4:30976404-30976423 MsG0480019970.01.T01:intron 55.0%
CAAACCATTGGAGGAGGGGT+GGG + Chr4:30975208-30975227 None:intergenic 55.0%
CAAGTCCTGGATCCTTCAGG+GGG - Chr4:30974097-30974116 MsG0480019970.01.T01:three_prime_UTR 55.0%
CGGAGCAGTCGACCAAAAGT+GGG + Chr4:30977281-30977300 None:intergenic 55.0%
CTCAGGCTGATCCGCTACTT+TGG + Chr4:30977055-30977074 None:intergenic 55.0%
CTCGACGAACTCATGGGTTC+AGG - Chr4:30976411-30976430 MsG0480019970.01.T01:intron 55.0%
CTGAACCCATGAGTTCGTCG+AGG + Chr4:30976413-30976432 None:intergenic 55.0%
GACAAGGGCAAGGAGCAAGA+AGG + Chr4:30975308-30975327 None:intergenic 55.0%
GAGGACCAATGACAAGGGCA+AGG + Chr4:30975318-30975337 None:intergenic 55.0%
GAGGGGAAGCTTGGATTTGG+TGG - Chr4:30973992-30974011 MsG0480019970.01.T01:three_prime_UTR 55.0%
GAGGTAATCGAGATCGGGGA+AGG - Chr4:30979213-30979232 MsG0480019970.01.T01:intron 55.0%
GCTCTCCTCGACGAACTCAT+GGG - Chr4:30976405-30976424 MsG0480019970.01.T01:intron 55.0%
GGAGCAGTCGACCAAAAGTG+GGG + Chr4:30977280-30977299 None:intergenic 55.0%
GGCAAGGAGCAAGAAGGCTA+AGG + Chr4:30975302-30975321 None:intergenic 55.0%
GGCACGTATGCATCATGCCT+TGG + Chr4:30978186-30978205 None:intergenic 55.0%
GGTAATCGAGATCGGGGAAG+GGG - Chr4:30979215-30979234 MsG0480019970.01.T01:intron 55.0%
GTCAACACGCGCAGTGATCT+CGG - Chr4:30976618-30976637 MsG0480019970.01.T01:intron 55.0%
GTCGACCAAAAGTGGGGTAG+CGG + Chr4:30977274-30977293 None:intergenic 55.0%
GTCGCAGGAAAGCAGCATGT+TGG - Chr4:30978856-30978875 MsG0480019970.01.T01:intron 55.0%
GTCGGAGTTGTTCCATGTGG+TGG - Chr4:30973750-30973769 MsG0480019970.01.T01:three_prime_UTR 55.0%
GTGAAGATTAGGGAGGGTGG+CGG - Chr4:30973782-30973801 MsG0480019970.01.T01:three_prime_UTR 55.0%
TACCTGGGGTTGCCTATTGG+TGG - Chr4:30973314-30973333 MsG0480019970.01.T01:three_prime_UTR 55.0%
TAGAGCAACCATGTGCAGGC+AGG + Chr4:30978006-30978025 None:intergenic 55.0%
TCAAACCATTGGAGGAGGGG+TGG + Chr4:30975209-30975228 None:intergenic 55.0%
TCGACCAAAAGTGGGGTAGC+GGG + Chr4:30977273-30977292 None:intergenic 55.0%
TGTGTCAGCTAGTGCGGTCT+TGG - Chr4:30975533-30975552 MsG0480019970.01.T01:CDS 55.0%
TTTCGGGCAAGCTCCTGCAT+CGG + Chr4:30977478-30977497 None:intergenic 55.0%
! AGATCCCGCTACCCCACTTT+TGG - Chr4:30977266-30977285 MsG0480019970.01.T01:intron 55.0%
! CATGGTAGGTTGGAGGATGG+GGG - Chr4:30973728-30973747 MsG0480019970.01.T01:three_prime_UTR 55.0%
! CCCTCCATGCTTTCTGGTGT+AGG - Chr4:30975246-30975265 MsG0480019970.01.T01:CDS 55.0%
! CTATTGGTGGCAATCCGCGT+CGG - Chr4:30973327-30973346 MsG0480019970.01.T01:three_prime_UTR 55.0%
! GCATGGTAGGTTGGAGGATG+GGG - Chr4:30973727-30973746 MsG0480019970.01.T01:three_prime_UTR 55.0%
! GTGCATGGTAGGTTGGAGGA+TGG - Chr4:30973725-30973744 MsG0480019970.01.T01:three_prime_UTR 55.0%
! GTTTTTGCTTGCGTGGGGGA+AGG - Chr4:30973970-30973989 MsG0480019970.01.T01:three_prime_UTR 55.0%
!! CAAAGTAGCGGATCAGCCTG+AGG - Chr4:30977053-30977072 MsG0480019970.01.T01:intron 55.0%
!! CCGCTACTTTGGGTTTTGCC+AGG + Chr4:30977044-30977063 None:intergenic 55.0%
!! CGGTTTTGTGTGGCTGAGTG+TGG - Chr4:30975457-30975476 MsG0480019970.01.T01:CDS 55.0%
!! GATGATGATGGTGGTGGTGG+TGG - Chr4:30974878-30974897 MsG0480019970.01.T01:CDS 55.0%
!! GGATTTGGTGGAGGAGGTTG+TGG - Chr4:30974004-30974023 MsG0480019970.01.T01:three_prime_UTR 55.0%
!! GGGAAGCTTGGATTTGGTGG+AGG - Chr4:30973995-30974014 MsG0480019970.01.T01:three_prime_UTR 55.0%
!! TGGGTGTTGTTGGCACGGTA+CGG - Chr4:30973698-30973717 MsG0480019970.01.T01:three_prime_UTR 55.0%
!! TTCAGGGGGTACTCAGTTCG+TGG - Chr4:30974111-30974130 MsG0480019970.01.T01:three_prime_UTR 55.0%
ATCGAGATCGGGGAAGGGGA+TGG - Chr4:30979219-30979238 MsG0480019970.01.T01:intron 60.0%
ATGTGCAGGCAGGCAACTGC+AGG + Chr4:30977996-30978015 None:intergenic 60.0%
CGGGGAAGGGGATGGTTTCT+AGG - Chr4:30979227-30979246 MsG0480019970.01.T01:intron 60.0%
GAGTACCCCCTGAAGGATCC+AGG + Chr4:30974105-30974124 None:intergenic 60.0%
GCGGAGCAGTCGACCAAAAG+TGG + Chr4:30977282-30977301 None:intergenic 60.0%
GGGGTCGGAGTTGTTCCATG+TGG - Chr4:30973747-30973766 MsG0480019970.01.T01:three_prime_UTR 60.0%
GTGGAGGAGGTTGTGGGTGT+GGG - Chr4:30974011-30974030 MsG0480019970.01.T01:three_prime_UTR 60.0%
GTTGTTGGCACGGTACGGTG+CGG - Chr4:30973703-30973722 MsG0480019970.01.T01:three_prime_UTR 60.0%
TGCAGTTGCCTGCCTGCACA+TGG - Chr4:30977995-30978014 MsG0480019970.01.T01:intron 60.0%
TGCCACCAATAGGCAACCCC+AGG + Chr4:30973319-30973338 None:intergenic 60.0%
TGGAGGGGGGTGAGGATCAT+AGG - Chr4:30973532-30973551 MsG0480019970.01.T01:three_prime_UTR 60.0%
TGTGGCTGAGTGTGGTCACG+AGG - Chr4:30975465-30975484 MsG0480019970.01.T01:CDS 60.0%
TTGCTTGCGTGGGGGAAGGA+GGG - Chr4:30973974-30973993 MsG0480019970.01.T01:three_prime_UTR 60.0%
TTTGCTTGCGTGGGGGAAGG+AGG - Chr4:30973973-30973992 MsG0480019970.01.T01:three_prime_UTR 60.0%
! CGACGCGGATTGCCACCAAT+AGG + Chr4:30973329-30973348 None:intergenic 60.0%
! GTAGGTTGGAGGATGGGGGT+CGG - Chr4:30973732-30973751 MsG0480019970.01.T01:three_prime_UTR 60.0%
! TGCGGTGCATGGTAGGTTGG+AGG - Chr4:30973721-30973740 MsG0480019970.01.T01:three_prime_UTR 60.0%
CGGTGCGGTGCATGGTAGGT+TGG - Chr4:30973718-30973737 MsG0480019970.01.T01:three_prime_UTR 65.0%
GAGGAGGTTGTGGGTGTGGG+AGG - Chr4:30974014-30974033 MsG0480019970.01.T01:three_prime_UTR 65.0%
GAGGTTGTGGGTGTGGGAGG+AGG - Chr4:30974017-30974036 MsG0480019970.01.T01:three_prime_UTR 65.0%
GGCTGAGTGTGGTCACGAGG+AGG - Chr4:30975468-30975487 MsG0480019970.01.T01:CDS 65.0%
GGTACGGTGCGGTGCATGGT+AGG - Chr4:30973714-30973733 MsG0480019970.01.T01:three_prime_UTR 65.0%
GGTGGAGGAGGTTGTGGGTG+TGG - Chr4:30974010-30974029 MsG0480019970.01.T01:three_prime_UTR 65.0%
GGTGTCCGGAGTTCGAACCC+CGG + Chr4:30976057-30976076 None:intergenic 65.0%
TGCTTGCGTGGGGGAAGGAG+GGG - Chr4:30973975-30973994 MsG0480019970.01.T01:three_prime_UTR 65.0%
TGGGGGAAGGAGGGGAAGCT+TGG - Chr4:30973983-30974002 MsG0480019970.01.T01:three_prime_UTR 65.0%
! ATTAGGGAGGGTGGCGGCAG+TGG - Chr4:30973788-30973807 MsG0480019970.01.T01:three_prime_UTR 65.0%
! GTCAATCCCGGATAGCGGCG+CGG + Chr4:30977301-30977320 None:intergenic 65.0%
!! TCAGCTGTCAGTGGTGGCGG+TGG + Chr4:30978413-30978432 None:intergenic 65.0%
ACTGCTCCGCGCCGCTATCC+GGG - Chr4:30977292-30977311 MsG0480019970.01.T01:intron 70.0%
CAGGGCCGGGGTTCGAACTC+CGG - Chr4:30976049-30976068 MsG0480019970.01.T01:intron 70.0%
GACTGCTCCGCGCCGCTATC+CGG - Chr4:30977291-30977310 MsG0480019970.01.T01:intron 70.0%
GCACGGTACGGTGCGGTGCA+TGG - Chr4:30973710-30973729 MsG0480019970.01.T01:three_prime_UTR 70.0%
TGCGCCCACCCCTCCTCCAA+TGG - Chr4:30975201-30975220 MsG0480019970.01.T01:CDS 70.0%
! GAGGGTGGCGGCAGTGGTGA+GGG - Chr4:30973794-30973813 MsG0480019970.01.T01:three_prime_UTR 70.0%
!! GCTGTCAGTGGTGGCGGTGG+TGG + Chr4:30978410-30978429 None:intergenic 70.0%
! GGAGGGTGGCGGCAGTGGTG+AGG - Chr4:30973793-30973812 MsG0480019970.01.T01:three_prime_UTR 75.0%
! GGTGGCGGCAGTGGTGAGGG+TGG - Chr4:30973797-30973816 MsG0480019970.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 30973227 30980749 30973227 ID=MsG0480019970.01;Name=MsG0480019970.01
Chr4 mRNA 30973227 30980749 30973227 ID=MsG0480019970.01.T01;Parent=MsG0480019970.01;Name=MsG0480019970.01.T01;_AED=0.30;_eAED=0.32;_QI=0|0.42|0.5|1|1|1|8|1496|438
Chr4 exon 30973227 30974974 30973227 ID=MsG0480019970.01.T01:exon:10092;Parent=MsG0480019970.01.T01
Chr4 exon 30975061 30975267 30975061 ID=MsG0480019970.01.T01:exon:10091;Parent=MsG0480019970.01.T01
Chr4 exon 30975432 30975632 30975432 ID=MsG0480019970.01.T01:exon:10090;Parent=MsG0480019970.01.T01
Chr4 exon 30975731 30975806 30975731 ID=MsG0480019970.01.T01:exon:10089;Parent=MsG0480019970.01.T01
Chr4 exon 30976218 30976306 30976218 ID=MsG0480019970.01.T01:exon:10088;Parent=MsG0480019970.01.T01
Chr4 exon 30977386 30977465 30977386 ID=MsG0480019970.01.T01:exon:10087;Parent=MsG0480019970.01.T01
Chr4 exon 30980167 30980301 30980167 ID=MsG0480019970.01.T01:exon:10086;Parent=MsG0480019970.01.T01
Chr4 exon 30980473 30980749 30980473 ID=MsG0480019970.01.T01:exon:10085;Parent=MsG0480019970.01.T01
Chr4 CDS 30980473 30980749 30980473 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30980167 30980301 30980167 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30977386 30977465 30977386 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30976218 30976306 30976218 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30975731 30975806 30975731 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30975432 30975632 30975432 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30975061 30975267 30975061 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 CDS 30974723 30974974 30974723 ID=MsG0480019970.01.T01:cds;Parent=MsG0480019970.01.T01
Chr4 three_prime_UTR 30973227 30974722 30973227 ID=MsG0480019970.01.T01:three_prime_utr;Parent=MsG0480019970.01.T01
Gene Sequence

>MsG0480019970.01.T01

ATGTTGGTGGGGGTCAATATGTTGGACTCTTGGTTGAGTGAGGCAGCGTCTGTGTTGAGCTGTAAAGTTGGTAAGGTCTCGTTCTTGTACCTGGGGTTGCCTATTGGTGGCAATCCGCGTCGGTTGTTGTTTTGGGAGTCTGTCGTTAACCGTATTAAAACTATATTGTCTTATTGGCAAAGCCGGTTTCTATCCTTTGGTGGTCACTTGGTTCTTCTAAAGTCTATCCTGACTGCACTTCCTGTTTATGCTTTCTTCTTCTTCAAGGCTTCATCAGTCGATAGAGGTAGTCTTTGGTATTGGGTGTTGTTGGCACGGTACGGTGCGGTGCATGGTAGGTTGGAGGATGGGGGTCGGAGTTGTTCCATGTGGTGGAGAGAGATAGTGAAGATTAGGGAGGGTGGCGGCAGTGCTCGAAACTTGACTGAGGAAGAAAGAAGGGGTTACAAAGAAGTGAGTTGGGACGATAAGGAAGTTTGTGGTTTCTATATGACGTGCGTCTATTACAAAAATGTCATTAGTGTTGCTCTTCTATCTATGTGGTTAAGCTATCTTAGTGCTGTGGTGCTTTTAGAAGCACCTTTTGAGAATTCCCCAAGGCATGATGCATACGTGCCTAAATTTGAAGCCGATCTTGCTCAGTTTTGTGAGAAATTGGTGATGGACTTGGATAGAAGAGTAAAACGTGGACGAGAACGTCTTAATCAAGAGGTGGAGCTACCACCACCGCCACCACTGACAGCTGAAAAATCTGAACAGTTGTCTGTCCTGGAGGAGAAAATAAAGAACCTTCTGGAACAAGTTGAATCTCTTGGTGAAGCTGGGAAGGTTGATGAAGCTGAAGCTCTTATGAGAAAGGTGGAGACACTTAATACCGAGAAGGCAGTCTTAACACAACCTCAAAATGAAAAAGTGTTAATGCTTCAGGAGAAGAAGATGGCACTCTGTGAGGTATGTGGTTCGTTTCTTGTGGCAAATGATGCTGCAGAAAGAACTCAGTCTCATGTCGCAGGAAAGCAGCATGTTGGCTATGGTATGGTTCGTGACTTCATAAATGAATACAAGATTGCTAAGGAGAAGGCTAAGGAAGAAGAAAGATTGACTCGGGAAAAAGAGGTAGAAGAGCGAAGAAAACAAAAGGAGCAGGATCCTGAGAGAAAGAGACGGAGTGTTTCAAGTGATAGGGAGAAATATCGTGATAAAGATCGAGATAGGCAGCGTGATAGGTACAGAGATAGAGACTCGGATCGTGAAAGATCTCGGGAATATGAAGGTAGAGGTAATCGAGATCGGGGAAGGGGATGGTTTCTAGGTTGA

Protein sequence

>MsG0480019970.01.T01

MLVGVNMLDSWLSEAASVLSCKVGKVSFLYLGLPIGGNPRRLLFWESVVNRIKTILSYWQSRFLSFGGHLVLLKSILTALPVYAFFFFKASSVDRGSLWYWVLLARYGAVHGRLEDGGRSCSMWWREIVKIREGGGSARNLTEEERRGYKEVSWDDKEVCGFYMTCVYYKNVISVALLSMWLSYLSAVVLLEAPFENSPRHDAYVPKFEADLAQFCEKLVMDLDRRVKRGRERLNQEVELPPPPPLTAEKSEQLSVLEEKIKNLLEQVESLGEAGKVDEAEALMRKVETLNTEKAVLTQPQNEKVLMLQEKKMALCEVCGSFLVANDAAERTQSHVAGKQHVGYGMVRDFINEYKIAKEKAKEEERLTREKEVEERRKQKEQDPERKRRSVSSDREKYRDKDRDRQRDRYRDRDSDRERSREYEGRGNRDRGRGWFLG*