AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029899.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029899.01.T01 MTR_5g097680 83.019 424 59 5 1 411 1 424 0.0 709
MsG0580029899.01.T01 MTR_5g064700 78.415 366 68 5 56 411 1 365 0.0 578
MsG0580029899.01.T01 MTR_5g094350 80.272 294 31 2 13 305 9 276 2.14e-164 469
MsG0580029899.01.T01 MTR_6g461660 51.294 425 166 12 2 413 4 400 2.90e-125 374
MsG0580029899.01.T01 MTR_5g076490 56.640 369 113 9 54 411 1 333 1.49e-115 347
MsG0580029899.01.T01 MTR_6g086825 47.653 426 177 16 5 409 55 455 7.34e-104 322
MsG0580029899.01.T01 MTR_6g079770 44.111 433 201 11 1 411 1 414 5.77e-99 307
MsG0580029899.01.T01 MTR_0054s0090 44.550 422 202 11 1 410 1 402 3.29e-98 305
MsG0580029899.01.T01 MTR_0054s0100 44.056 429 196 11 1 410 1 404 8.53e-98 304
MsG0580029899.01.T01 MTR_6g090180 45.519 424 197 12 1 410 31 434 1.86e-97 304
MsG0580029899.01.T01 MTR_2g038680 43.636 440 184 14 3 411 2 408 5.27e-94 294
MsG0580029899.01.T01 MTR_0134s0060 43.632 424 206 10 6 411 1 409 1.01e-93 293
MsG0580029899.01.T01 MTR_6g079810 43.692 428 203 13 1 411 54 460 4.88e-93 293
MsG0580029899.01.T01 MTR_4g028510 45.755 424 184 18 6 411 4 399 5.67e-93 293
MsG0580029899.01.T01 MTR_0129s0070 42.790 423 200 11 1 411 1 393 6.92e-91 286
MsG0580029899.01.T01 MTR_2g021800 42.757 428 201 11 1 405 1 407 3.32e-89 282
MsG0580029899.01.T01 MTR_5g097330 44.498 418 196 12 6 410 5 399 6.62e-89 281
MsG0580029899.01.T01 MTR_5g097330 32.065 184 80 5 444 584 90 271 6.45e-14 74.3
MsG0580029899.01.T01 MTR_6g080680 43.499 423 190 14 1 408 1 389 2.75e-88 279
MsG0580029899.01.T01 MTR_0129s0050 41.781 438 195 14 1 411 1 405 3.18e-88 279
MsG0580029899.01.T01 MTR_2g022000 41.315 426 206 10 3 405 2 406 1.94e-87 278
MsG0580029899.01.T01 MTR_1g115205 56.140 285 69 8 1 282 17 248 2.99e-86 268
MsG0580029899.01.T01 MTR_4g028680 43.405 417 202 15 6 411 4 397 3.25e-86 274
MsG0580029899.01.T01 MTR_6g478230 41.339 433 188 15 2 409 11 402 4.32e-86 274
MsG0580029899.01.T01 MTR_4g130330 43.689 412 189 14 15 411 5 388 4.01e-85 270
MsG0580029899.01.T01 MTR_0129s0120 42.654 422 200 12 1 410 1 392 5.95e-85 270
MsG0580029899.01.T01 MTR_7g017130 41.549 426 197 13 3 411 4 394 7.50e-85 270
MsG0580029899.01.T01 MTR_2g021950 40.811 419 210 13 3 410 2 393 9.18e-84 267
MsG0580029899.01.T01 MTR_5g097220 42.032 433 199 15 1 410 1 404 2.79e-83 266
MsG0580029899.01.T01 MTR_2g021770 41.218 427 197 16 10 410 5 403 3.07e-83 266
MsG0580029899.01.T01 MTR_7g017170 40.547 439 195 15 3 411 4 406 8.81e-82 262
MsG0580029899.01.T01 MTR_4g117550 40.191 418 195 11 1 411 1 370 1.71e-81 260
MsG0580029899.01.T01 MTR_4g028660 41.527 419 204 17 6 410 4 395 2.33e-81 261
MsG0580029899.01.T01 MTR_4g027450 41.527 419 204 17 6 410 4 395 2.33e-81 261
MsG0580029899.01.T01 MTR_8g063440 40.777 412 206 14 6 411 1 380 1.41e-79 256
MsG0580029899.01.T01 MTR_5g037680 41.889 413 183 16 15 408 6 380 1.46e-79 258
MsG0580029899.01.T01 MTR_8g464770 40.447 403 199 11 12 408 7 374 1.65e-79 255
MsG0580029899.01.T01 MTR_5g069390 40.323 434 197 17 15 420 24 423 4.01e-79 258
MsG0580029899.01.T01 MTR_5g069390 34.831 178 68 4 439 573 99 271 3.95e-19 91.3
MsG0580029899.01.T01 MTR_5g059430 40.898 423 197 16 15 409 24 421 4.56e-79 256
MsG0580029899.01.T01 MTR_5g059430 34.359 195 80 4 434 584 99 289 1.53e-20 94.7
MsG0580029899.01.T01 MTR_5g096910 41.093 421 196 15 7 411 6 390 8.09e-79 254
MsG0580029899.01.T01 MTR_5g097350 41.905 420 197 15 1 410 1 383 8.64e-78 251
MsG0580029899.01.T01 MTR_8g012090 42.386 394 158 12 1 385 1 334 1.58e-77 249
MsG0580029899.01.T01 MTR_8g064890 40.515 427 191 14 6 411 1 385 4.16e-77 249
MsG0580029899.01.T01 MTR_2g034700 40.633 411 186 14 9 407 5 369 6.55e-77 248
MsG0580029899.01.T01 MTR_4g014370 39.437 426 213 16 8 410 2 405 1.53e-76 249
MsG0580029899.01.T01 MTR_2g066200 38.443 411 220 14 6 410 1 384 2.34e-76 248
MsG0580029899.01.T01 MTR_4g055820 42.820 383 172 11 7 371 4 357 6.11e-76 245
MsG0580029899.01.T01 MTR_7g017040 42.180 422 201 15 4 411 3 395 7.84e-76 246
MsG0580029899.01.T01 MTR_2g066170 36.893 412 225 12 6 411 1 383 2.09e-75 245
MsG0580029899.01.T01 MTR_3g011120 39.320 412 189 15 7 403 4 369 6.13e-75 243
MsG0580029899.01.T01 MTR_8g033140 36.971 449 216 13 1 413 1 418 6.38e-75 245
MsG0580029899.01.T01 MTR_8g041270 41.121 428 200 16 7 411 5 403 1.30e-74 244
MsG0580029899.01.T01 MTR_6g090250 41.235 405 194 13 35 409 29 419 4.05e-74 243
MsG0580029899.01.T01 MTR_4g102410 40.930 430 207 16 1 410 44 446 1.00e-73 243
MsG0580029899.01.T01 MTR_7g069550 40.380 421 191 16 10 406 7 391 4.77e-73 239
MsG0580029899.01.T01 MTR_2g104340 41.026 429 190 18 7 411 4 393 1.61e-72 238
MsG0580029899.01.T01 MTR_4g028750 40.369 379 199 11 15 388 14 370 3.64e-72 237
MsG0580029899.01.T01 MTR_8g046310 38.298 423 199 14 6 413 2 377 4.47e-72 236
MsG0580029899.01.T01 MTR_5g092850 38.588 425 204 14 14 415 13 403 1.37e-71 236
MsG0580029899.01.T01 MTR_0831s0010 37.589 423 216 14 1 411 32 418 4.35e-71 235
MsG0580029899.01.T01 MTR_1g007410 39.953 423 206 16 1 406 7 398 1.10e-70 233
MsG0580029899.01.T01 MTR_8g467670 38.903 401 205 13 15 411 12 376 1.25e-70 233
MsG0580029899.01.T01 MTR_5g074850 41.787 414 186 18 6 396 23 404 4.19e-70 243
MsG0580029899.01.T01 MTR_5g096630 37.731 432 214 15 6 410 7 410 2.75e-68 227
MsG0580029899.01.T01 MTR_5g091140 38.653 401 189 10 2 389 33 389 7.63e-68 226
MsG0580029899.01.T01 MTR_5g092860 39.633 381 158 13 35 393 20 350 7.97e-67 222
MsG0580029899.01.T01 MTR_2g065840 35.867 421 220 13 6 411 1 386 1.35e-66 222
MsG0580029899.01.T01 MTR_6g078010 39.946 368 171 12 54 409 1 330 2.35e-66 220
MsG0580029899.01.T01 MTR_1g053510 36.427 431 214 14 6 409 4 401 2.53e-66 222
MsG0580029899.01.T01 MTR_8g039500 36.458 384 202 10 6 385 1 346 1.33e-65 218
MsG0580029899.01.T01 MTR_1g007450 39.312 407 204 15 6 398 1 378 1.46e-65 220
MsG0580029899.01.T01 MTR_6g079790 42.073 328 149 12 102 411 2 306 2.28e-65 216
MsG0580029899.01.T01 MTR_5g094360 70.588 153 44 1 433 584 4 156 3.84e-65 210
MsG0580029899.01.T01 MTR_5g075370 40.488 410 183 19 15 397 6 381 3.96e-65 228
MsG0580029899.01.T01 MTR_7g079640 39.951 408 184 18 10 405 7 365 1.37e-63 214
MsG0580029899.01.T01 MTR_7g111700 37.939 427 184 16 1 411 1 362 6.37e-63 211
MsG0580029899.01.T01 MTR_2g104280 38.298 423 217 14 8 411 5 402 7.24e-63 213
MsG0580029899.01.T01 MTR_2g065860 34.940 415 231 12 6 411 1 385 4.86e-62 210
MsG0580029899.01.T01 MTR_5g024260 36.817 421 213 15 14 417 19 403 1.18e-61 209
MsG0580029899.01.T01 MTR_8g033110 35.811 444 208 16 6 408 2 409 3.21e-61 208
MsG0580029899.01.T01 MTR_8g036970 37.302 378 160 8 21 396 2 304 3.29e-61 207
MsG0580029899.01.T01 MTR_8g046200 35.449 457 207 19 7 413 3 421 4.32e-61 208
MsG0580029899.01.T01 MTR_8g046220 33.933 445 214 17 7 413 3 405 9.05e-61 207
MsG0580029899.01.T01 MTR_8g018110 35.116 430 212 16 6 408 2 391 1.44e-60 206
MsG0580029899.01.T01 MTR_8g033090 35.892 443 206 16 6 408 2 406 1.61e-60 206
MsG0580029899.01.T01 MTR_2g064950 36.905 420 199 14 11 406 4 381 4.09e-60 205
MsG0580029899.01.T01 MTR_4g007940 39.067 343 157 13 90 411 28 339 5.49e-60 203
MsG0580029899.01.T01 MTR_2g066150 33.981 412 209 11 6 410 1 356 8.31e-60 203
MsG0580029899.01.T01 MTR_8g032980 34.598 448 211 16 10 411 7 418 2.18e-59 204
MsG0580029899.01.T01 MTR_8g013000 39.541 392 167 18 11 374 4 353 6.52e-59 202
MsG0580029899.01.T01 MTR_8g063330 37.500 376 186 13 6 366 1 342 7.87e-59 204
MsG0580029899.01.T01 MTR_5g072060 39.119 386 184 13 16 392 5 348 1.35e-58 206
MsG0580029899.01.T01 MTR_1g098180 34.279 423 186 13 10 411 12 363 1.42e-58 200
MsG0580029899.01.T01 MTR_1g007430 40.223 358 163 12 28 374 7 324 3.70e-58 197
MsG0580029899.01.T01 MTR_7g104710 40.294 340 137 10 1 330 1 284 1.14e-57 196
MsG0580029899.01.T01 MTR_5g096900 40.057 352 155 12 6 340 1 313 3.78e-57 195
MsG0580029899.01.T01 MTR_7g016930 39.143 350 160 11 4 348 3 304 1.89e-56 193
MsG0580029899.01.T01 MTR_6g087620 39.939 328 135 10 90 404 1 279 1.52e-54 186
MsG0580029899.01.T01 MTR_5g022850 38.482 382 175 21 54 411 5 350 5.39e-53 185
MsG0580029899.01.T01 MTR_8g064790 35.322 419 173 13 6 411 1 334 5.53e-53 184
MsG0580029899.01.T01 MTR_5g043605 35.735 347 181 14 70 411 27 336 3.93e-52 183
MsG0580029899.01.T01 MTR_6g090260 51.064 188 83 4 230 409 73 259 1.25e-51 178
MsG0580029899.01.T01 MTR_6g090260 64.179 67 21 2 1 64 1 67 6.53e-15 75.5
MsG0580029899.01.T01 MTR_5g074800 37.203 379 167 15 56 406 1 336 1.81e-51 180
MsG0580029899.01.T01 MTR_7g023800 36.490 359 162 11 56 405 1 302 8.17e-49 172
MsG0580029899.01.T01 MTR_6g004450 44.269 253 120 9 167 410 25 265 7.89e-48 168
MsG0580029899.01.T01 MTR_8g063370 32.678 407 223 16 8 405 19 383 1.92e-47 171
MsG0580029899.01.T01 MTR_6g070880 42.471 259 124 9 1 250 15 257 6.67e-45 160
MsG0580029899.01.T01 MTR_6g071420 42.471 259 124 9 1 250 15 257 6.67e-45 160
MsG0580029899.01.T01 MTR_2g021920 44.068 236 110 10 193 410 38 269 9.95e-45 160
MsG0580029899.01.T01 MTR_5g086590 40.244 246 117 9 150 390 13 233 1.98e-44 158
MsG0580029899.01.T01 MTR_6g465360 41.897 253 115 9 2 240 47 281 1.28e-42 155
MsG0580029899.01.T01 MTR_1g050312 34.314 306 142 10 90 389 16 268 4.60e-41 150
MsG0580029899.01.T01 MTR_5g068490 34.385 317 154 11 99 411 8 274 2.15e-40 148
MsG0580029899.01.T01 MTR_8g063350 31.202 391 181 15 9 389 6 318 7.46e-40 149
MsG0580029899.01.T01 MTR_5g097820 34.471 293 151 9 6 288 8 269 1.35e-38 143
MsG0580029899.01.T01 MTR_5g097820 34.921 189 74 2 437 584 89 269 1.49e-24 103
MsG0580029899.01.T01 MTR_1g076810 33.429 347 179 13 1 342 1 300 2.64e-38 150
MsG0580029899.01.T01 MTR_4g014370 43.564 202 99 7 218 410 138 333 8.00e-38 143
MsG0580029899.01.T01 MTR_4g014370 41.525 118 67 2 1 116 6 123 5.60e-17 82.8
MsG0580029899.01.T01 MTR_8g063310 30.824 425 218 19 8 405 13 388 1.75e-37 144
MsG0580029899.01.T01 MTR_1g050308 38.583 254 112 9 3 249 20 236 3.06e-37 142
MsG0580029899.01.T01 MTR_1g050308 38.393 112 65 3 303 411 234 344 1.15e-13 73.2
MsG0580029899.01.T01 MTR_5g023970 44.385 187 95 5 230 410 9 192 8.30e-37 136
MsG0580029899.01.T01 MTR_4g016000 39.301 229 93 8 155 372 2 195 1.25e-36 136
MsG0580029899.01.T01 MTR_5g037190 34.812 293 144 8 3 291 2 251 3.17e-36 136
MsG0580029899.01.T01 MTR_3g018750 41.393 244 107 10 193 410 4 237 3.98e-36 135
MsG0580029899.01.T01 MTR_5g097850 45.213 188 82 6 237 411 63 242 5.41e-36 135
MsG0580029899.01.T01 MTR_2g104260 36.120 299 157 8 7 296 4 277 8.04e-35 133
MsG0580029899.01.T01 MTR_6g009350 43.523 193 101 7 190 378 6 194 1.60e-34 129
MsG0580029899.01.T01 MTR_5g066420 47.651 149 70 4 263 403 1 149 3.77e-34 127
MsG0580029899.01.T01 MTR_8g035690 37.358 265 121 9 180 411 48 300 1.58e-33 130
MsG0580029899.01.T01 MTR_8g033000 30.100 402 195 14 54 411 1 360 3.68e-33 130
MsG0580029899.01.T01 MTR_6g079730 50.355 141 64 3 275 409 5 145 9.52e-33 123
MsG0580029899.01.T01 MTR_3g030620 43.210 162 80 5 260 411 20 179 2.73e-30 117
MsG0580029899.01.T01 MTR_8g073570 37.688 199 94 8 6 203 1 170 5.88e-29 113
MsG0580029899.01.T01 MTR_5g097650 41.040 173 74 4 2 174 12 156 3.72e-27 107
MsG0580029899.01.T01 MTR_5g098950 36.797 231 94 8 151 374 89 274 4.44e-27 111
MsG0580029899.01.T01 MTR_7g017150 42.353 170 92 5 231 397 81 247 1.44e-26 109
MsG0580029899.01.T01 MTR_7g017120 41.111 180 97 6 224 397 70 246 3.59e-26 108
MsG0580029899.01.T01 MTR_5g096920 42.308 156 80 5 263 413 1 151 4.48e-26 104
MsG0580029899.01.T01 MTR_7g019250 36.493 211 102 7 193 393 225 413 2.23e-25 110
MsG0580029899.01.T01 MTR_5g097540 32.083 240 146 7 143 379 13 238 2.33e-24 103
MsG0580029899.01.T01 MTR_2g022020 50.000 102 50 1 310 410 15 116 9.78e-23 94.0
MsG0580029899.01.T01 MTR_3g019290 33.333 228 89 7 14 238 11 178 3.30e-22 94.7
MsG0580029899.01.T01 MTR_5g096070 36.747 166 62 5 6 169 15 139 4.13e-22 93.6
MsG0580029899.01.T01 MTR_5g091150 34.728 239 83 11 102 323 2 184 4.66e-22 94.7
MsG0580029899.01.T01 MTR_5g097660 47.788 113 55 3 302 410 4 116 3.78e-21 89.7
MsG0580029899.01.T01 MTR_8g041440 45.690 116 37 2 9 117 7 103 4.08e-21 89.4
MsG0580029899.01.T01 MTR_4g133170 25.418 299 177 13 128 408 89 359 3.33e-20 93.6
MsG0580029899.01.T01 MTR_7g101200 32.365 241 120 9 142 377 30 232 4.28e-20 90.1
MsG0580029899.01.T01 MTR_2g028130 23.645 406 233 15 20 392 8 369 2.49e-19 90.9
MsG0580029899.01.T01 MTR_2g028160 23.614 415 258 17 20 409 8 388 1.51e-18 88.6
MsG0580029899.01.T01 MTR_5g036250 43.750 112 57 3 313 422 8 115 2.34e-18 83.6
MsG0580029899.01.T01 MTR_1g068835 23.590 390 233 13 15 392 2 338 2.92e-18 87.4
MsG0580029899.01.T01 MTR_5g096050 44.444 108 49 3 263 359 1 108 4.18e-18 80.9
MsG0580029899.01.T01 MTR_2g426070 24.060 399 254 15 25 409 14 377 1.17e-17 85.9
MsG0580029899.01.T01 MTR_6g087660 58.228 79 30 2 1 76 1 79 2.14e-17 81.3
MsG0580029899.01.T01 MTR_5g086780 48.515 101 48 2 292 388 124 224 3.30e-17 81.6
MsG0580029899.01.T01 MTR_5g086780 40.945 127 47 3 3 129 2 100 1.36e-13 70.9
MsG0580029899.01.T01 MTR_4g023080 23.472 409 242 14 10 410 2 347 7.14e-17 82.8
MsG0580029899.01.T01 MTR_2g031720 23.604 394 224 15 20 392 9 346 9.27e-17 83.2
MsG0580029899.01.T01 MTR_3g047580 35.625 160 64 6 8 164 4 127 1.29e-16 77.0
MsG0580029899.01.T01 MTR_0667s0010 23.940 401 237 16 20 395 9 366 2.36e-16 82.0
MsG0580029899.01.T01 MTR_4g116330 25.467 428 238 21 2 410 8 373 5.69e-16 80.5
MsG0580029899.01.T01 MTR_2g031640 25.253 297 177 12 129 409 92 359 8.27e-16 80.1
MsG0580029899.01.T01 MTR_2g024110 21.981 414 248 16 17 409 4 363 1.00e-15 79.7
MsG0580029899.01.T01 MTR_0115s0020 24.800 375 207 15 20 367 13 339 1.56e-15 79.3
MsG0580029899.01.T01 MTR_1g037540 25.000 364 198 13 20 350 8 329 1.65e-15 79.3
MsG0580029899.01.T01 MTR_2g026010 26.523 279 158 16 129 388 90 340 5.71e-15 77.4
MsG0580029899.01.T01 MTR_2g426060 23.096 407 257 17 20 409 9 376 6.12e-15 77.4
MsG0580029899.01.T01 MTR_4g094400 42.857 105 46 2 260 350 7 111 8.63e-15 71.6
MsG0580029899.01.T01 MTR_3g083010 21.845 412 238 17 20 392 9 375 9.67e-15 77.0
MsG0580029899.01.T01 MTR_4g023090 25.065 383 213 16 6 372 2 326 1.10e-14 76.6
MsG0580029899.01.T01 MTR_4g019990 23.596 356 217 12 13 353 2 317 1.33e-14 76.3
MsG0580029899.01.T01 MTR_4g021785 23.058 412 241 15 10 410 2 348 2.55e-14 75.1
MsG0580029899.01.T01 MTR_3g009310 23.324 373 217 12 20 380 45 360 3.31e-14 75.1
MsG0580029899.01.T01 MTR_1g055135 23.699 346 201 12 16 351 12 304 3.75e-14 74.7
MsG0580029899.01.T01 MTR_5g070088 24.408 422 251 15 12 410 2 378 5.24e-14 74.3
MsG0580029899.01.T01 MTR_4g023130 23.864 264 159 9 153 410 79 306 7.09e-14 73.2
MsG0580029899.01.T01 MTR_4g030830 25.205 365 201 14 10 352 2 316 1.46e-13 73.2
MsG0580029899.01.T01 MTR_4g070550 22.791 430 241 21 20 412 8 383 1.79e-13 72.8
MsG0580029899.01.T01 MTR_3g047540 42.697 89 44 3 228 316 2 83 1.98e-13 66.6
MsG0580029899.01.T01 MTR_5g097210 23.888 427 243 19 10 418 2 364 2.66e-13 72.0
MsG0580029899.01.T01 MTR_0064s0160 24.038 416 254 21 16 408 41 417 6.10e-13 71.6
MsG0580029899.01.T01 MTR_2g046900 24.155 414 236 21 16 408 27 383 8.60e-13 70.9
MsG0580029899.01.T01 MTR_2g025420 23.383 402 244 18 20 392 9 375 2.46e-12 69.7
MsG0580029899.01.T01 MTR_1g097490 24.346 382 224 16 3 378 35 357 2.48e-12 69.3
MsG0580029899.01.T01 MTR_4g023440 21.823 417 220 13 2 410 7 325 2.55e-12 68.9
MsG0580029899.01.T01 MTR_7g077970 26.257 358 204 15 17 352 7 326 2.90e-12 69.3
MsG0580029899.01.T01 MTR_1g050542 23.134 402 239 17 19 408 60 403 4.31e-12 68.6
MsG0580029899.01.T01 MTR_2g028140 20.782 409 248 15 20 394 8 374 4.42e-12 68.6
MsG0580029899.01.T01 MTR_5g049560 31.013 158 92 5 54 206 1 146 4.90e-12 67.0
MsG0580029899.01.T01 MTR_3g013740 25.210 357 210 16 6 352 33 342 5.08e-12 68.6
MsG0580029899.01.T01 MTR_4g023120 22.917 336 204 12 20 352 6 289 5.26e-12 68.2
MsG0580029899.01.T01 MTR_4g023070 22.619 336 205 13 20 352 6 289 8.45e-12 67.4
MsG0580029899.01.T01 MTR_4g023380 21.281 437 246 13 1 410 5 370 9.30e-12 67.4
MsG0580029899.01.T01 MTR_2g031680 22.604 407 239 14 19 411 8 352 1.81e-11 66.6
MsG0580029899.01.T01 MTR_3g097190 40.845 71 41 1 320 389 11 81 2.05e-11 63.5
MsG0580029899.01.T01 MTR_1g088120 23.798 416 233 16 16 390 9 381 5.40e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029899.01.T01 AT3G06240 23.913 368 195 16 20 351 39 357 4.36e-12 68.9
MsG0580029899.01.T01 AT4G12560 23.155 393 237 15 20 394 7 352 1.54e-11 67.0
MsG0580029899.01.T01 AT4G12560 23.155 393 237 15 20 394 7 352 1.54e-11 67.0
MsG0580029899.01.T01 AT4G12560 23.155 393 237 15 20 394 7 352 1.54e-11 67.0

Find 99 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTGTAACATATCAATTT+TGG 0.082390 5:+103718688 MsG0580029899.01.T01:CDS
TGGATTAAACTCTTCATTAT+TGG 0.166420 5:+103718734 MsG0580029899.01.T01:CDS
AGTAGTTATGTTTGTGGATT+TGG 0.216850 5:+103718260 MsG0580029899.01.T01:CDS
AATACAACTCAAATGTTTCT+TGG 0.262437 5:-103719642 None:intergenic
TCCAGACAAAGACTTGTTTA+TGG 0.269287 5:+103717938 MsG0580029899.01.T01:CDS
GGATTAAACTCTTCATTATT+GGG 0.271059 5:+103718735 MsG0580029899.01.T01:CDS
GAAGCTTCGGCTAATCATTA+TGG 0.271479 5:+103719895 MsG0580029899.01.T01:CDS
AAACAATTGGTGGTGTTAAA+TGG 0.283938 5:+103718629 MsG0580029899.01.T01:CDS
TCGGCTAATCATTATGGATT+TGG 0.293501 5:+103719901 MsG0580029899.01.T01:CDS
CATTGCGTTGAAGAACCTTT+TGG 0.303435 5:+103718764 MsG0580029899.01.T01:CDS
CTTCCTTCTTGAAATGGATT+TGG 0.306881 5:-103718017 None:intergenic
ATTATATGTCTCCAATATTA+AGG 0.310039 5:-103720031 None:intergenic
GATCAAGCACCTCAATCATT+TGG 0.316284 5:-103718853 None:intergenic
ATATTGGAGACATATAATTT+AGG 0.316866 5:+103720036 MsG0580029899.01.T01:CDS
CCAGACAAAGACTTGTTTAT+GGG 0.322451 5:+103717939 MsG0580029899.01.T01:CDS
GTTGAGGAAAATTGTGGTAT+AGG 0.330906 5:-103718446 None:intergenic
TGTGTACAATTCTACATTGA+TGG 0.336243 5:+103720111 MsG0580029899.01.T01:CDS
GAGATACACCTGAACCCTTT+TGG 0.345967 5:+103718372 MsG0580029899.01.T01:CDS
GTTTCACTTCCTTCTTGAAA+TGG 0.355718 5:-103718023 None:intergenic
CAATATGCTTCACACGTCTA+TGG 0.357916 5:+103720086 MsG0580029899.01.T01:CDS
AGAATAAATTCAAATTAGAT+TGG 0.370848 5:+103719686 MsG0580029899.01.T01:CDS
AATCGCTTCAAAGATTTAAT+CGG 0.374251 5:-103717786 None:intergenic
GCCCCGTTCCCTCATTGTAT+TGG 0.381467 5:+103718335 MsG0580029899.01.T01:CDS
ACATTGATGGATTCTCTAAT+CGG 0.382088 5:+103720124 MsG0580029899.01.T01:CDS
CCAAATCTAAAATATCAAAA+TGG 0.386925 5:-103718061 None:intergenic
GGTAATATCATCATGTATAT+AGG 0.392761 5:-103717742 None:intergenic
TAGACTGTATATCTTCCAAA+AGG 0.410767 5:-103718387 None:intergenic
ATCAAGCACCTCAATCATTT+GGG 0.412255 5:-103718852 None:intergenic
ATGATGTAAGATTTGCACTA+TGG 0.413007 5:+103718138 MsG0580029899.01.T01:CDS
TTAGCATGAGCGATACATTA+TGG 0.413016 5:-103717905 None:intergenic
ACCTTGAATTCGTCTGTAGT+TGG 0.415489 5:-103718164 None:intergenic
TTCAAATTTCTCGCCAGAAA+AGG 0.416972 5:-103717973 None:intergenic
TATATCTTCCAAAAGGGTTC+AGG 0.417780 5:-103718380 None:intergenic
CAAGTAGGTACAAAATCAAA+AGG 0.419031 5:-103719871 None:intergenic
TTGTTCTTCATATGTGATCA+AGG 0.420764 5:-103718660 None:intergenic
CATTCAAGTAGTTATGTTTG+TGG 0.420989 5:+103718254 MsG0580029899.01.T01:CDS
ATTAAATCTTTGAAGCGATT+CGG 0.428852 5:+103717789 MsG0580029899.01.T01:CDS
AACCAATACAATGAGGGAAC+GGG 0.428878 5:-103718337 None:intergenic
CCCATAAACAAGTCTTTGTC+TGG 0.434353 5:-103717939 None:intergenic
ATAATTTAGGAAGTAACTCT+TGG 0.436775 5:+103720049 MsG0580029899.01.T01:CDS
TCATCTATGTCTGAGGGTAT+TGG 0.436979 5:-103718590 None:intergenic
TGTACCTACTTGGGAAGCTT+CGG 0.437427 5:+103719882 MsG0580029899.01.T01:CDS
AAGGAAGACCTTCTTCCAAT+TGG 0.437501 5:+103718908 MsG0580029899.01.T01:CDS
TTCTAAATTTGAATCAAAGT+TGG 0.443033 5:+103718529 MsG0580029899.01.T01:CDS
AACTAAGTGTAAAAGATTCA+TGG 0.445293 5:+103718714 MsG0580029899.01.T01:CDS
TGTATTGGTTATAAGCCATT+GGG 0.464185 5:+103718350 MsG0580029899.01.T01:CDS
TCATTCCTCATAGCTCGAAT+AGG 0.465199 5:+103718186 MsG0580029899.01.T01:CDS
TTGTATTGGTTATAAGCCAT+TGG 0.473577 5:+103718349 MsG0580029899.01.T01:CDS
TCAAAATGGTGGAGACGATA+AGG 0.476696 5:-103718047 None:intergenic
ATTGAGGTGCTTGATCTTGA+AGG 0.477635 5:+103718860 MsG0580029899.01.T01:CDS
TGGTAAAAGATATCTTCATT+TGG 0.480961 5:-103720006 None:intergenic
ACAGTCTAAGAAGTAACTCT+TGG 0.483295 5:+103718402 MsG0580029899.01.T01:CDS
CTTAAGAACCCAAATGATTG+AGG 0.484022 5:+103718844 MsG0580029899.01.T01:CDS
GATACATTATGGTGATAAGA+AGG 0.484424 5:-103717894 None:intergenic
TTACCCTTTGTCATTCCAAA+AGG 0.484501 5:-103718779 None:intergenic
TTATTCCACCAATTGGAAGA+AGG 0.496695 5:-103718916 None:intergenic
AAGGACAAGGTGTACATGAA+TGG 0.498476 5:+103718470 MsG0580029899.01.T01:CDS
TCGAATAGGATTCATCCGTT+TGG 0.500383 5:+103718200 MsG0580029899.01.T01:CDS
CTTCATTTGGATGTGCATCA+AGG 0.501816 5:-103719993 None:intergenic
TGGCTAGCATTTGCACCAAA+CGG 0.506864 5:-103718215 None:intergenic
GTCTAAGAAGTAACTCTTGG+AGG 0.508633 5:+103718405 MsG0580029899.01.T01:CDS
TGTGACTGCGACGCAAGAAA+AGG 0.513375 5:+103717713 MsG0580029899.01.T01:CDS
AATTCAAATTAGATTGGCCA+AGG 0.516363 5:+103719692 MsG0580029899.01.T01:CDS
TCCAACTACAGACGAATTCA+AGG 0.521951 5:+103718163 MsG0580029899.01.T01:CDS
ACAAAATCAAAAGGGTATTG+AGG 0.531448 5:-103719862 None:intergenic
AAAAGTGAAATACATAATGA+AGG 0.534814 5:+103720153 MsG0580029899.01.T01:CDS
TCCTTAGTTGAGGAAAATTG+TGG 0.540217 5:-103718452 None:intergenic
AATGAAAATTAATCACATCA+TGG 0.543580 5:-103718235 None:intergenic
ACATGAATGGAATATGTCAT+TGG 0.548455 5:+103718483 MsG0580029899.01.T01:CDS
TTGTGATATAGCACTTTACA+AGG 0.550908 5:+103718889 MsG0580029899.01.T01:CDS
TCGGATGCGTACGTAAATCA+TGG 0.565510 5:+103717808 MsG0580029899.01.T01:CDS
GTACACCTTGTCCTTAGTTG+AGG 0.568249 5:-103718462 None:intergenic
ACTAAATCTAACTTCACCCT+TGG 0.570120 5:-103719709 None:intergenic
ACATCATTGTTCTAGTCGGA+TGG 0.571429 5:-103720186 None:intergenic
AATCTAAAATATCAAAATGG+TGG 0.576094 5:-103718058 None:intergenic
AGACTGTATATCTTCCAAAA+GGG 0.576936 5:-103718386 None:intergenic
CGTCAGATAAGATATTGTTA+CGG 0.580938 5:-103717869 None:intergenic
TGAATCCTATTCGAGCTATG+AGG 0.581333 5:-103718191 None:intergenic
ATACCCTCAGACATAGATGA+TGG 0.590041 5:+103718593 MsG0580029899.01.T01:CDS
AAGTAGGTACAAAATCAAAA+GGG 0.591961 5:-103719870 None:intergenic
ATGTGCATCAAGGTCATGAT+CGG 0.594993 5:-103719983 None:intergenic
TAACCAATACAATGAGGGAA+CGG 0.595155 5:-103718338 None:intergenic
GGCTTATAACCAATACAATG+AGG 0.600440 5:-103718344 None:intergenic
CTACCAAATCCATTTCAAGA+AGG 0.602171 5:+103718014 MsG0580029899.01.T01:CDS
GGTTCTTCAACGCAATGCAA+CGG 0.602823 5:-103718758 None:intergenic
GTCATTTGATTTGAACAAAG+AGG 0.605022 5:+103718553 MsG0580029899.01.T01:CDS
GCTTATAACCAATACAATGA+GGG 0.606557 5:-103718343 None:intergenic
GAAAACATCATTGTTCTAGT+CGG 0.606881 5:-103720190 None:intergenic
AGAGCCATCATCTATGTCTG+AGG 0.611199 5:-103718597 None:intergenic
ATACATTATGGTGATAAGAA+GGG 0.613357 5:-103717893 None:intergenic
GAGCCATCATCTATGTCTGA+GGG 0.616204 5:-103718596 None:intergenic
TTAGCCGAAGCTTCCCAAGT+AGG 0.629270 5:-103719886 None:intergenic
GGTTCAGGTGTATCTCCCAA+TGG 0.640950 5:-103718365 None:intergenic
ATTCAAATTAGATTGGCCAA+GGG 0.648505 5:+103719693 MsG0580029899.01.T01:CDS
ACTGCGACGCAAGAAAAGGT+TGG 0.657677 5:+103717717 MsG0580029899.01.T01:CDS
ACCAATACAATGAGGGAACG+GGG 0.659399 5:-103718336 None:intergenic
ATGTCTCCAATATTAAGGAG+TGG 0.668063 5:-103720026 None:intergenic
TATGTCTGAGGGTATTGGTG+TGG 0.696463 5:-103718585 None:intergenic
GTATCGCTCATGCTAATGCG+TGG 0.732874 5:+103717912 MsG0580029899.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTACAATTTTTTTTA+AGG + Chr5:103719409-103719428 MsG0580029899.01.T01:intron 10.0%
!! AGAATAAATTCAAATTAGAT+TGG + Chr5:103719686-103719705 MsG0580029899.01.T01:CDS 15.0%
!! ATGATTTATGTTATTGAATA+TGG + Chr5:103718977-103718996 MsG0580029899.01.T01:intron 15.0%
!!! ATTTTGGTTTTGATATTTTA+AGG + Chr5:103719747-103719766 MsG0580029899.01.T01:intron 15.0%
!!! CATTTTGATATTTTAGATTT+GGG + Chr5:103718062-103718081 MsG0580029899.01.T01:CDS 15.0%
!! AAAAGTGAAATACATAATGA+AGG + Chr5:103720153-103720172 MsG0580029899.01.T01:CDS 20.0%
!! AATGAAAATTAATCACATCA+TGG - Chr5:103718238-103718257 None:intergenic 20.0%
!! ACTAATTTCTTTATATAGAG+AGG - Chr5:103719152-103719171 None:intergenic 20.0%
!! AGAAAGACAGAAAAATAAAT+TGG + Chr5:103718816-103718835 MsG0580029899.01.T01:CDS 20.0%
!! ATATTGGAGACATATAATTT+AGG + Chr5:103720036-103720055 MsG0580029899.01.T01:CDS 20.0%
!! ATTATATGTCTCCAATATTA+AGG - Chr5:103720034-103720053 None:intergenic 20.0%
!! CAAGAATTAAGATAAATTGT+TGG - Chr5:103719237-103719256 None:intergenic 20.0%
!! GTTACATAAATAAATTCACA+GGG + Chr5:103719539-103719558 MsG0580029899.01.T01:intron 20.0%
!! TTCTAAATTTGAATCAAAGT+TGG + Chr5:103718529-103718548 MsG0580029899.01.T01:CDS 20.0%
!!! AATCTAAAATATCAAAATGG+TGG - Chr5:103718061-103718080 None:intergenic 20.0%
!!! ACTTGTAACATATCAATTTT+GGG + Chr5:103718689-103718708 MsG0580029899.01.T01:CDS 20.0%
!!! CCAAATCTAAAATATCAAAA+TGG - Chr5:103718064-103718083 None:intergenic 20.0%
!!! CCATTTTGATATTTTAGATT+TGG + Chr5:103718061-103718080 MsG0580029899.01.T01:CDS 20.0%
!!! CTCTTATTTTGAAAAACAAT+TGG + Chr5:103718616-103718635 MsG0580029899.01.T01:CDS 20.0%
!!! TAATTTTGATAGAATTGAGA+AGG - Chr5:103717766-103717785 None:intergenic 20.0%
!!! TACTTGTAACATATCAATTT+TGG + Chr5:103718688-103718707 MsG0580029899.01.T01:CDS 20.0%
!!! TTATTTTGAAAAACAATTGG+TGG + Chr5:103718619-103718638 MsG0580029899.01.T01:CDS 20.0%
!!! TTTGAGTTGTATTTTGTTTT+TGG + Chr5:103719652-103719671 MsG0580029899.01.T01:CDS 20.0%
! AAAGATACGCAAATATATAG+CGG - Chr5:103719354-103719373 None:intergenic 25.0%
! AACTAAGTGTAAAAGATTCA+TGG + Chr5:103718714-103718733 MsG0580029899.01.T01:CDS 25.0%
! AAGTAGGTACAAAATCAAAA+GGG - Chr5:103719873-103719892 None:intergenic 25.0%
! AATACAACTCAAATGTTTCT+TGG - Chr5:103719645-103719664 None:intergenic 25.0%
! AATCGCTTCAAAGATTTAAT+CGG - Chr5:103717789-103717808 None:intergenic 25.0%
! ACATAAATCATCACATTTCT+AGG - Chr5:103718968-103718987 None:intergenic 25.0%
! ATAATTTAGGAAGTAACTCT+TGG + Chr5:103720049-103720068 MsG0580029899.01.T01:CDS 25.0%
! ATACATTATGGTGATAAGAA+GGG - Chr5:103717896-103717915 None:intergenic 25.0%
! GGATTAAACTCTTCATTATT+GGG + Chr5:103718735-103718754 MsG0580029899.01.T01:CDS 25.0%
! GGTAATATCATCATGTATAT+AGG - Chr5:103717745-103717764 None:intergenic 25.0%
! GGTTACATAAATAAATTCAC+AGG + Chr5:103719538-103719557 MsG0580029899.01.T01:intron 25.0%
! TACTTATTTATTCCACCAAT+TGG - Chr5:103718926-103718945 None:intergenic 25.0%
! TGAATTTGATTCAAGCTTTA+TGG + Chr5:103719095-103719114 MsG0580029899.01.T01:intron 25.0%
! TGGATTAAACTCTTCATTAT+TGG + Chr5:103718734-103718753 MsG0580029899.01.T01:CDS 25.0%
! TGGTAAAAGATATCTTCATT+TGG - Chr5:103720009-103720028 None:intergenic 25.0%
!! GAGTTTCAATTTCATTTTGA+CGG + Chr5:103719610-103719629 MsG0580029899.01.T01:CDS 25.0%
!!! AAATCCTTTTTTCATGAACA+TGG + Chr5:103717845-103717864 MsG0580029899.01.T01:CDS 25.0%
!!! ATTAAATCTTTGAAGCGATT+CGG + Chr5:103717789-103717808 MsG0580029899.01.T01:CDS 25.0%
!!! GGTTTTGATATTTTAAGGTA+TGG + Chr5:103719752-103719771 MsG0580029899.01.T01:intron 25.0%
!!! TCAATGGTATGTAGTTTTAA+TGG + Chr5:103719267-103719286 MsG0580029899.01.T01:intron 25.0%
!!! TTTGATATTTTAGATTTGGG+CGG + Chr5:103718065-103718084 MsG0580029899.01.T01:CDS 25.0%
!!! TTTTGATTTTGTACCTACTT+GGG + Chr5:103719873-103719892 MsG0580029899.01.T01:CDS 25.0%
AAAACTACATACCATTGAAG+TGG - Chr5:103719265-103719284 None:intergenic 30.0%
ACATGAATGGAATATGTCAT+TGG + Chr5:103718483-103718502 MsG0580029899.01.T01:CDS 30.0%
AGACTGTATATCTTCCAAAA+GGG - Chr5:103718389-103718408 None:intergenic 30.0%
AGTAGTTATGTTTGTGGATT+TGG + Chr5:103718260-103718279 MsG0580029899.01.T01:CDS 30.0%
ATCCCAATCCTGTATATTAA+TGG + Chr5:103719313-103719332 MsG0580029899.01.T01:intron 30.0%
ATGATGTAAGATTTGCACTA+TGG + Chr5:103718138-103718157 MsG0580029899.01.T01:CDS 30.0%
CAAGTAGGTACAAAATCAAA+AGG - Chr5:103719874-103719893 None:intergenic 30.0%
CATTCAAGTAGTTATGTTTG+TGG + Chr5:103718254-103718273 MsG0580029899.01.T01:CDS 30.0%
CCTATCTATTACGGAATTTA+AGG + Chr5:103719834-103719853 MsG0580029899.01.T01:intron 30.0%
CCTTAAATTCCGTAATAGAT+AGG - Chr5:103719837-103719856 None:intergenic 30.0%
CGTCAGATAAGATATTGTTA+CGG - Chr5:103717872-103717891 None:intergenic 30.0%
GATACATTATGGTGATAAGA+AGG - Chr5:103717897-103717916 None:intergenic 30.0%
GCTTATAACCAATACAATGA+GGG - Chr5:103718346-103718365 None:intergenic 30.0%
GGTTATTGCCATTAATATAC+AGG - Chr5:103719324-103719343 None:intergenic 30.0%
TAGACTGTATATCTTCCAAA+AGG - Chr5:103718390-103718409 None:intergenic 30.0%
TCTGAGTTAATGTTGTATTG+TGG + Chr5:103719809-103719828 MsG0580029899.01.T01:intron 30.0%
TGCCATTAATATACAGGATT+GGG - Chr5:103719318-103719337 None:intergenic 30.0%
TGTGTACAATTCTACATTGA+TGG + Chr5:103720111-103720130 MsG0580029899.01.T01:CDS 30.0%
TTCTAGGTGAAAACAAGAAA+AGG - Chr5:103718952-103718971 None:intergenic 30.0%
TTGCCATTAATATACAGGAT+TGG - Chr5:103719319-103719338 None:intergenic 30.0%
TTGTGATATAGCACTTTACA+AGG + Chr5:103718889-103718908 MsG0580029899.01.T01:CDS 30.0%
TTGTTCTTCATATGTGATCA+AGG - Chr5:103718663-103718682 None:intergenic 30.0%
! AATTCAAATTAGATTGGCCA+AGG + Chr5:103719692-103719711 MsG0580029899.01.T01:CDS 30.0%
! ATTCAAATTAGATTGGCCAA+GGG + Chr5:103719693-103719712 MsG0580029899.01.T01:CDS 30.0%
! CTTTTACCACTCCTTAATAT+TGG + Chr5:103720020-103720039 MsG0580029899.01.T01:CDS 30.0%
! TGTATCTGCTAGTATGATTT+TGG + Chr5:103719731-103719750 MsG0580029899.01.T01:intron 30.0%
! TTTTGTCTTGTGAAATCTCA+GGG + Chr5:103719199-103719218 MsG0580029899.01.T01:intron 30.0%
! TTTTTGTCTTGTGAAATCTC+AGG + Chr5:103719198-103719217 MsG0580029899.01.T01:intron 30.0%
!! AAACAATTGGTGGTGTTAAA+TGG + Chr5:103718629-103718648 MsG0580029899.01.T01:CDS 30.0%
!! ACAAAATCAAAAGGGTATTG+AGG - Chr5:103719865-103719884 None:intergenic 30.0%
!! ACATTGATGGATTCTCTAAT+CGG + Chr5:103720124-103720143 MsG0580029899.01.T01:CDS 30.0%
!! GTCATTTGATTTGAACAAAG+AGG + Chr5:103718553-103718572 MsG0580029899.01.T01:CDS 30.0%
!! TGTATTGGTTATAAGCCATT+GGG + Chr5:103718350-103718369 MsG0580029899.01.T01:CDS 30.0%
!! TTGTATTGGTTATAAGCCAT+TGG + Chr5:103718349-103718368 MsG0580029899.01.T01:CDS 30.0%
!!! CTTTTGATTTTGTACCTACT+TGG + Chr5:103719872-103719891 MsG0580029899.01.T01:CDS 30.0%
ACAGTCTAAGAAGTAACTCT+TGG + Chr5:103718402-103718421 MsG0580029899.01.T01:CDS 35.0%
ACTAAATCTAACTTCACCCT+TGG - Chr5:103719712-103719731 None:intergenic 35.0%
ATCAAGCACCTCAATCATTT+GGG - Chr5:103718855-103718874 None:intergenic 35.0%
ATGTCTCCAATATTAAGGAG+TGG - Chr5:103720029-103720048 None:intergenic 35.0%
ATTGTGGAGCCTATCTATTA+CGG + Chr5:103719825-103719844 MsG0580029899.01.T01:intron 35.0%
CAAATATATAGCGGCTAATG+AGG - Chr5:103719345-103719364 None:intergenic 35.0%
CTACCAAATCCATTTCAAGA+AGG + Chr5:103718014-103718033 MsG0580029899.01.T01:CDS 35.0%
CTTAAGAACCCAAATGATTG+AGG + Chr5:103718844-103718863 MsG0580029899.01.T01:CDS 35.0%
GGCTTATAACCAATACAATG+AGG - Chr5:103718347-103718366 None:intergenic 35.0%
GTTGAGGAAAATTGTGGTAT+AGG - Chr5:103718449-103718468 None:intergenic 35.0%
GTTTCACTTCCTTCTTGAAA+TGG - Chr5:103718026-103718045 None:intergenic 35.0%
TAACCAATACAATGAGGGAA+CGG - Chr5:103718341-103718360 None:intergenic 35.0%
TATATCTTCCAAAAGGGTTC+AGG - Chr5:103718383-103718402 None:intergenic 35.0%
TCCTTAGTTGAGGAAAATTG+TGG - Chr5:103718455-103718474 None:intergenic 35.0%
TCGGCTAATCATTATGGATT+TGG + Chr5:103719901-103719920 MsG0580029899.01.T01:CDS 35.0%
TTACCCTTTGTCATTCCAAA+AGG - Chr5:103718782-103718801 None:intergenic 35.0%
TTAGCATGAGCGATACATTA+TGG - Chr5:103717908-103717927 None:intergenic 35.0%
TTATTCCACCAATTGGAAGA+AGG - Chr5:103718919-103718938 None:intergenic 35.0%
TTCAAATTTCTCGCCAGAAA+AGG - Chr5:103717976-103717995 None:intergenic 35.0%
TTCTTGAATCTCCACTTCAA+TGG + Chr5:103719251-103719270 MsG0580029899.01.T01:intron 35.0%
! ACCACAATTTTCCTCAACTA+AGG + Chr5:103718451-103718470 MsG0580029899.01.T01:CDS 35.0%
! ATTTTCCTCAACTAAGGACA+AGG + Chr5:103718457-103718476 MsG0580029899.01.T01:CDS 35.0%
! CCAGACAAAGACTTGTTTAT+GGG + Chr5:103717939-103717958 MsG0580029899.01.T01:CDS 35.0%
! CTTCCTTCTTGAAATGGATT+TGG - Chr5:103718020-103718039 None:intergenic 35.0%
! TCCAGACAAAGACTTGTTTA+TGG + Chr5:103717938-103717957 MsG0580029899.01.T01:CDS 35.0%
! TTAAGGTATGGTAGTGTTCA+TGG + Chr5:103719764-103719783 MsG0580029899.01.T01:intron 35.0%
!! GGAGTTTTGTATTCCTTTTC+TGG + Chr5:103717960-103717979 MsG0580029899.01.T01:CDS 35.0%
!!! AGAACCTTTTGGAATGACAA+AGG + Chr5:103718775-103718794 MsG0580029899.01.T01:CDS 35.0%
!!! GAACCTTTTGGAATGACAAA+GGG + Chr5:103718776-103718795 MsG0580029899.01.T01:CDS 35.0%
AACCAATACAATGAGGGAAC+GGG - Chr5:103718340-103718359 None:intergenic 40.0%
AAGGAAGACCTTCTTCCAAT+TGG + Chr5:103718908-103718927 MsG0580029899.01.T01:CDS 40.0%
AAGGACAAGGTGTACATGAA+TGG + Chr5:103718470-103718489 MsG0580029899.01.T01:CDS 40.0%
ACCTTGAATTCGTCTGTAGT+TGG - Chr5:103718167-103718186 None:intergenic 40.0%
ATACCCTCAGACATAGATGA+TGG + Chr5:103718593-103718612 MsG0580029899.01.T01:CDS 40.0%
ATGTGCATCAAGGTCATGAT+CGG - Chr5:103719986-103720005 None:intergenic 40.0%
CAATATGCTTCACACGTCTA+TGG + Chr5:103720086-103720105 MsG0580029899.01.T01:CDS 40.0%
CCCATAAACAAGTCTTTGTC+TGG - Chr5:103717942-103717961 None:intergenic 40.0%
CGGACCATGTTCATGAAAAA+AGG - Chr5:103717852-103717871 None:intergenic 40.0%
CTTCATTTGGATGTGCATCA+AGG - Chr5:103719996-103720015 None:intergenic 40.0%
GAAGCTTCGGCTAATCATTA+TGG + Chr5:103719895-103719914 MsG0580029899.01.T01:CDS 40.0%
GATCAAGCACCTCAATCATT+TGG - Chr5:103718856-103718875 None:intergenic 40.0%
GCATTGCGTACAAACTGATA+TGG + Chr5:103718999-103719018 MsG0580029899.01.T01:intron 40.0%
GTCTAAGAAGTAACTCTTGG+AGG + Chr5:103718405-103718424 MsG0580029899.01.T01:CDS 40.0%
TCATTCCTCATAGCTCGAAT+AGG + Chr5:103718186-103718205 MsG0580029899.01.T01:CDS 40.0%
TCCAACTACAGACGAATTCA+AGG + Chr5:103718163-103718182 MsG0580029899.01.T01:CDS 40.0%
TCGAATAGGATTCATCCGTT+TGG + Chr5:103718200-103718219 MsG0580029899.01.T01:CDS 40.0%
TGAATCCTATTCGAGCTATG+AGG - Chr5:103718194-103718213 None:intergenic 40.0%
! ATTGAGGTGCTTGATCTTGA+AGG + Chr5:103718860-103718879 MsG0580029899.01.T01:CDS 40.0%
! CATTGCGTTGAAGAACCTTT+TGG + Chr5:103718764-103718783 MsG0580029899.01.T01:CDS 40.0%
! TCAAAATGGTGGAGACGATA+AGG - Chr5:103718050-103718069 None:intergenic 40.0%
! TCATCTATGTCTGAGGGTAT+TGG - Chr5:103718593-103718612 None:intergenic 40.0%
ACCAATACAATGAGGGAACG+GGG - Chr5:103718339-103718358 None:intergenic 45.0%
AGAGCCATCATCTATGTCTG+AGG - Chr5:103718600-103718619 None:intergenic 45.0%
GAAGACCTTCTTCCAATTGG+TGG + Chr5:103718911-103718930 MsG0580029899.01.T01:intron 45.0%
GAGCCATCATCTATGTCTGA+GGG - Chr5:103718599-103718618 None:intergenic 45.0%
GGTTCTTCAACGCAATGCAA+CGG - Chr5:103718761-103718780 None:intergenic 45.0%
GTACACCTTGTCCTTAGTTG+AGG - Chr5:103718465-103718484 None:intergenic 45.0%
GTCTTGTGAAATCTCAGGGT+TGG + Chr5:103719203-103719222 MsG0580029899.01.T01:intron 45.0%
TCGGATGCGTACGTAAATCA+TGG + Chr5:103717808-103717827 MsG0580029899.01.T01:CDS 45.0%
TGGCTAGCATTTGCACCAAA+CGG - Chr5:103718218-103718237 None:intergenic 45.0%
TGTACCTACTTGGGAAGCTT+CGG + Chr5:103719882-103719901 MsG0580029899.01.T01:CDS 45.0%
! GAGATACACCTGAACCCTTT+TGG + Chr5:103718372-103718391 MsG0580029899.01.T01:CDS 45.0%
!! TATGTCTGAGGGTATTGGTG+TGG - Chr5:103718588-103718607 None:intergenic 45.0%
!!! ATTATAAATAATTTCTTTTT+TGG + Chr5:103719517-103719536 MsG0580029899.01.T01:intron 5.0%
ACTGCGACGCAAGAAAAGGT+TGG + Chr5:103717717-103717736 MsG0580029899.01.T01:CDS 50.0%
GGTTCAGGTGTATCTCCCAA+TGG - Chr5:103718368-103718387 None:intergenic 50.0%
GTATCGCTCATGCTAATGCG+TGG + Chr5:103717912-103717931 MsG0580029899.01.T01:CDS 50.0%
TGTGACTGCGACGCAAGAAA+AGG + Chr5:103717713-103717732 MsG0580029899.01.T01:CDS 50.0%
TTAGCCGAAGCTTCCCAAGT+AGG - Chr5:103719889-103719908 None:intergenic 50.0%
GCCCCGTTCCCTCATTGTAT+TGG + Chr5:103718335-103718354 MsG0580029899.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 103717699 103720197 103717699 ID=MsG0580029899.01;Name=MsG0580029899.01
Chr5 mRNA 103717699 103720197 103717699 ID=MsG0580029899.01.T01;Parent=MsG0580029899.01;Name=MsG0580029899.01.T01;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|584
Chr5 exon 103717699 103718929 103717699 ID=MsG0580029899.01.T01:exon:5822;Parent=MsG0580029899.01.T01
Chr5 exon 103719560 103719741 103719560 ID=MsG0580029899.01.T01:exon:5823;Parent=MsG0580029899.01.T01
Chr5 exon 103719856 103720197 103719856 ID=MsG0580029899.01.T01:exon:5824;Parent=MsG0580029899.01.T01
Chr5 CDS 103717699 103718929 103717699 ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01
Chr5 CDS 103719560 103719741 103719560 ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01
Chr5 CDS 103719856 103720197 103719856 ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01
Gene Sequence

>MsG0580029899.01.T01

ATGGAGAAGAAATATGTGACTGCGACGCAAGAAAAGGTTGGTACCTATATACATGATGATATTACCTTCTCAATTCTATCAAAATTACCGATTAAATCTTTGAAGCGATTCGGATGCGTACGTAAATCATGGTCACTTCTATTTGAAAATCCTTTTTTCATGAACATGGTCCGTAACAATATCTTATCTGACGACCCTTCTTATCACCATAATGTATCGCTCATGCTAATGCGTGGTTGTCCAGACAAAGACTTGTTTATGGGAGTTTTGTATTCCTTTTCTGGCGAGAAATTTGAAAATAAAGCGAAATTAAATCTACCAAATCCATTTCAAGAAGGAAGTGAAACTCCTTATCGTCTCCACCATTTTGATATTTTAGATTTGGGCGGTTTTAATGACTTTATTTGTGTCAAATGTAATCTTCGTCATAACTACAAACATGATGTAAGATTTGCACTATGGAATCCAACTACAGACGAATTCAAGGTCATTCCTCATAGCTCGAATAGGATTCATCCGTTTGGTGCAAATGCTAGCCATGATGTGATTAATTTTCATTCAAGTAGTTATGTTTGTGGATTTGGCTATGATTCTCGTACAAATGACTATAAGATGATTAATTATGTGATGTTTTTAGCCCCGTTCCCTCATTGTATTGGTTATAAGCCATTGGGAGATACACCTGAACCCTTTTGGAAGATATACAGTCTAAGAAGTAACTCTTGGAGGAAACTTGATATTGTTATGCCTATACCACAATTTTCCTCAACTAAGGACAAGGTGTACATGAATGGAATATGTCATTGGTGTTGTATTATAATGCATTCTGATTCTAAATTTGAATCAAAGTTGGTGTCATTTGATTTGAACAAAGAGGTGTTTTTTACCACACCAATACCCTCAGACATAGATGATGGCTCTTATTTTGAAAAACAATTGGTGGTGTTAAATGGATACATTGCCTTGATCACATATGAAGAACAAATGACTACTTGTAACATATCAATTTTGGGTGAACTAAGTGTAAAAGATTCATGGATTAAACTCTTCATTATTGGGCCGTTGCATTGCGTTGAAGAACCTTTTGGAATGACAAAGGGTAAAATAATCTTCAGAAAGAAAGACAGAAAAATAAATTGGTTTGACTTAAGAACCCAAATGATTGAGGTGCTTGATCTTGAAGGAGAATATTGTGATATAGCACTTTACAAGGAAGACCTTCTTCCAATTGGGTGCAACTTTTTCACTTTGACTCTAGAAATAATACTTGTACGTTTTCGTGAGTTTCAATTTCATTTTGACGGTTATTATCACCAAGAAACATTTGAGTTGTATTTTGTTTTTGGTGAGAGTTTTGAGAATAAATTCAAATTAGATTGGCCAAGGGTGAAGTTAGATTTAGTGTATCTGCTAGTCATTCCTCAATACCCTTTTGATTTTGTACCTACTTGGGAAGCTTCGGCTAATCATTATGGATTTGGTCATGATAGTAATAGAGACGACTATAAAGTGATGTGTCACGTAGTATTTTGTTGTAGAACCGATCATGACCTTGATGCACATCCAAATGAAGATATCTTTTACCACTCCTTAATATTGGAGACATATAATTTAGGAAGTAACTCTTGGAGAAAACATGATGTCAATATGCTTCACACGTCTATGGATTGTGTACAATTCTACATTGATGGATTCTCTAATCGGCTATGTAAAAGTGAAATACATAATGAAGGATATTCGTTGCCATCCGACTAG

Protein sequence

>MsG0580029899.01.T01

MEKKYVTATQEKVGTYIHDDITFSILSKLPIKSLKRFGCVRKSWSLLFENPFFMNMVRNNILSDDPSYHHNVSLMLMRGCPDKDLFMGVLYSFSGEKFENKAKLNLPNPFQEGSETPYRLHHFDILDLGGFNDFICVKCNLRHNYKHDVRFALWNPTTDEFKVIPHSSNRIHPFGANASHDVINFHSSSYVCGFGYDSRTNDYKMINYVMFLAPFPHCIGYKPLGDTPEPFWKIYSLRSNSWRKLDIVMPIPQFSSTKDKVYMNGICHWCCIIMHSDSKFESKLVSFDLNKEVFFTTPIPSDIDDGSYFEKQLVVLNGYIALITYEEQMTTCNISILGELSVKDSWIKLFIIGPLHCVEEPFGMTKGKIIFRKKDRKINWFDLRTQMIEVLDLEGEYCDIALYKEDLLPIGCNFFTLTLEIILVRFREFQFHFDGYYHQETFELYFVFGESFENKFKLDWPRVKLDLVYLLVIPQYPFDFVPTWEASANHYGFGHDSNRDDYKVMCHVVFCCRTDHDLDAHPNEDIFYHSLILETYNLGSNSWRKHDVNMLHTSMDCVQFYIDGFSNRLCKSEIHNEGYSLPSD*