Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029899.01.T01 | AET00944.1 | 83.019 | 424 | 59 | 5 | 1 | 411 | 1 | 424 | 0 | 709 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029899.01.T01 | Q8GXC7 | 23.913 | 368 | 195 | 16 | 20 | 351 | 39 | 357 | 4.27E-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029899.01.T01 | G7K4X1 | 83.019 | 424 | 59 | 5 | 1 | 411 | 1 | 424 | 0.0 | 709 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380011574.01 | MsG0580029899.01 | 0.800879 | 1.171587e-48 | 5.516894e-46 |
MsG0480018664.01 | MsG0580029899.01 | 0.806048 | 9.937116e-50 | 5.340391e-47 |
MsG0480019482.01 | MsG0580029899.01 | 0.802784 | 4.760025e-49 | 2.352432e-46 |
MsG0380014977.01 | MsG0580029899.01 | 0.842031 | 3.313583e-58 | 4.959926e-55 |
MsG0380017312.01 | MsG0580029899.01 | 0.821591 | 3.722827e-53 | 3.041572e-50 |
MsG0380017820.01 | MsG0580029899.01 | 0.811631 | 6.355306e-51 | 3.953859e-48 |
MsG0380017821.01 | MsG0580029899.01 | 0.806503 | 7.971550e-50 | 4.333877e-47 |
MsG0580026222.01 | MsG0580029899.01 | 0.857005 | 2.190677e-62 | 5.328096e-59 |
MsG0580026276.01 | MsG0580029899.01 | 0.800250 | 1.573847e-48 | 7.293434e-46 |
MsG0580026303.01 | MsG0580029899.01 | 0.802139 | 6.465640e-49 | 3.143090e-46 |
MsG0580027332.01 | MsG0580029899.01 | 0.837378 | 5.384993e-57 | 6.981537e-54 |
MsG0580029381.01 | MsG0580029899.01 | 0.885002 | 1.183092e-71 | 7.983350e-68 |
MsG0580029899.01 | MsG0680030524.01 | 0.802034 | 6.794224e-49 | 3.294043e-46 |
MsG0580029899.01 | MsG0680031380.01 | 0.830557 | 2.747089e-55 | 2.904170e-52 |
MsG0580029899.01 | MsG0780037606.01 | 0.813597 | 2.361640e-51 | 1.548973e-48 |
MsG0580029899.01 | MsG0780039282.01 | 0.877122 | 8.091866e-69 | 4.022811e-65 |
MsG0580029899.01 | MsG0880041916.01 | 0.801129 | 1.041797e-48 | 4.936767e-46 |
MsG0580029899.01 | MsG0880044644.01 | 0.810485 | 1.125760e-50 | 6.794352e-48 |
MsG0580029899.01 | MsG0880044788.01 | 0.824465 | 7.954434e-54 | 7.050805e-51 |
MsG0280006551.01 | MsG0580029899.01 | 0.841381 | 4.918357e-58 | 7.214225e-55 |
MsG0280008759.01 | MsG0580029899.01 | 0.820867 | 5.466311e-53 | 4.377357e-50 |
MsG0280009248.01 | MsG0580029899.01 | 0.800963 | 1.126064e-48 | 5.313919e-46 |
MsG0280009306.01 | MsG0580029899.01 | 0.802053 | 6.732395e-49 | 3.265680e-46 |
MsG0280009371.01 | MsG0580029899.01 | 0.809543 | 1.796766e-50 | 1.057892e-47 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029899.01.T01 | MTR_5g097680 | 83.019 | 424 | 59 | 5 | 1 | 411 | 1 | 424 | 0.0 | 709 |
MsG0580029899.01.T01 | MTR_5g064700 | 78.415 | 366 | 68 | 5 | 56 | 411 | 1 | 365 | 0.0 | 578 |
MsG0580029899.01.T01 | MTR_5g094350 | 80.272 | 294 | 31 | 2 | 13 | 305 | 9 | 276 | 2.14e-164 | 469 |
MsG0580029899.01.T01 | MTR_6g461660 | 51.294 | 425 | 166 | 12 | 2 | 413 | 4 | 400 | 2.90e-125 | 374 |
MsG0580029899.01.T01 | MTR_5g076490 | 56.640 | 369 | 113 | 9 | 54 | 411 | 1 | 333 | 1.49e-115 | 347 |
MsG0580029899.01.T01 | MTR_6g086825 | 47.653 | 426 | 177 | 16 | 5 | 409 | 55 | 455 | 7.34e-104 | 322 |
MsG0580029899.01.T01 | MTR_6g079770 | 44.111 | 433 | 201 | 11 | 1 | 411 | 1 | 414 | 5.77e-99 | 307 |
MsG0580029899.01.T01 | MTR_0054s0090 | 44.550 | 422 | 202 | 11 | 1 | 410 | 1 | 402 | 3.29e-98 | 305 |
MsG0580029899.01.T01 | MTR_0054s0100 | 44.056 | 429 | 196 | 11 | 1 | 410 | 1 | 404 | 8.53e-98 | 304 |
MsG0580029899.01.T01 | MTR_6g090180 | 45.519 | 424 | 197 | 12 | 1 | 410 | 31 | 434 | 1.86e-97 | 304 |
MsG0580029899.01.T01 | MTR_2g038680 | 43.636 | 440 | 184 | 14 | 3 | 411 | 2 | 408 | 5.27e-94 | 294 |
MsG0580029899.01.T01 | MTR_0134s0060 | 43.632 | 424 | 206 | 10 | 6 | 411 | 1 | 409 | 1.01e-93 | 293 |
MsG0580029899.01.T01 | MTR_6g079810 | 43.692 | 428 | 203 | 13 | 1 | 411 | 54 | 460 | 4.88e-93 | 293 |
MsG0580029899.01.T01 | MTR_4g028510 | 45.755 | 424 | 184 | 18 | 6 | 411 | 4 | 399 | 5.67e-93 | 293 |
MsG0580029899.01.T01 | MTR_0129s0070 | 42.790 | 423 | 200 | 11 | 1 | 411 | 1 | 393 | 6.92e-91 | 286 |
MsG0580029899.01.T01 | MTR_2g021800 | 42.757 | 428 | 201 | 11 | 1 | 405 | 1 | 407 | 3.32e-89 | 282 |
MsG0580029899.01.T01 | MTR_5g097330 | 44.498 | 418 | 196 | 12 | 6 | 410 | 5 | 399 | 6.62e-89 | 281 |
MsG0580029899.01.T01 | MTR_5g097330 | 32.065 | 184 | 80 | 5 | 444 | 584 | 90 | 271 | 6.45e-14 | 74.3 |
MsG0580029899.01.T01 | MTR_6g080680 | 43.499 | 423 | 190 | 14 | 1 | 408 | 1 | 389 | 2.75e-88 | 279 |
MsG0580029899.01.T01 | MTR_0129s0050 | 41.781 | 438 | 195 | 14 | 1 | 411 | 1 | 405 | 3.18e-88 | 279 |
MsG0580029899.01.T01 | MTR_2g022000 | 41.315 | 426 | 206 | 10 | 3 | 405 | 2 | 406 | 1.94e-87 | 278 |
MsG0580029899.01.T01 | MTR_1g115205 | 56.140 | 285 | 69 | 8 | 1 | 282 | 17 | 248 | 2.99e-86 | 268 |
MsG0580029899.01.T01 | MTR_4g028680 | 43.405 | 417 | 202 | 15 | 6 | 411 | 4 | 397 | 3.25e-86 | 274 |
MsG0580029899.01.T01 | MTR_6g478230 | 41.339 | 433 | 188 | 15 | 2 | 409 | 11 | 402 | 4.32e-86 | 274 |
MsG0580029899.01.T01 | MTR_4g130330 | 43.689 | 412 | 189 | 14 | 15 | 411 | 5 | 388 | 4.01e-85 | 270 |
MsG0580029899.01.T01 | MTR_0129s0120 | 42.654 | 422 | 200 | 12 | 1 | 410 | 1 | 392 | 5.95e-85 | 270 |
MsG0580029899.01.T01 | MTR_7g017130 | 41.549 | 426 | 197 | 13 | 3 | 411 | 4 | 394 | 7.50e-85 | 270 |
MsG0580029899.01.T01 | MTR_2g021950 | 40.811 | 419 | 210 | 13 | 3 | 410 | 2 | 393 | 9.18e-84 | 267 |
MsG0580029899.01.T01 | MTR_5g097220 | 42.032 | 433 | 199 | 15 | 1 | 410 | 1 | 404 | 2.79e-83 | 266 |
MsG0580029899.01.T01 | MTR_2g021770 | 41.218 | 427 | 197 | 16 | 10 | 410 | 5 | 403 | 3.07e-83 | 266 |
MsG0580029899.01.T01 | MTR_7g017170 | 40.547 | 439 | 195 | 15 | 3 | 411 | 4 | 406 | 8.81e-82 | 262 |
MsG0580029899.01.T01 | MTR_4g117550 | 40.191 | 418 | 195 | 11 | 1 | 411 | 1 | 370 | 1.71e-81 | 260 |
MsG0580029899.01.T01 | MTR_4g028660 | 41.527 | 419 | 204 | 17 | 6 | 410 | 4 | 395 | 2.33e-81 | 261 |
MsG0580029899.01.T01 | MTR_4g027450 | 41.527 | 419 | 204 | 17 | 6 | 410 | 4 | 395 | 2.33e-81 | 261 |
MsG0580029899.01.T01 | MTR_8g063440 | 40.777 | 412 | 206 | 14 | 6 | 411 | 1 | 380 | 1.41e-79 | 256 |
MsG0580029899.01.T01 | MTR_5g037680 | 41.889 | 413 | 183 | 16 | 15 | 408 | 6 | 380 | 1.46e-79 | 258 |
MsG0580029899.01.T01 | MTR_8g464770 | 40.447 | 403 | 199 | 11 | 12 | 408 | 7 | 374 | 1.65e-79 | 255 |
MsG0580029899.01.T01 | MTR_5g069390 | 40.323 | 434 | 197 | 17 | 15 | 420 | 24 | 423 | 4.01e-79 | 258 |
MsG0580029899.01.T01 | MTR_5g069390 | 34.831 | 178 | 68 | 4 | 439 | 573 | 99 | 271 | 3.95e-19 | 91.3 |
MsG0580029899.01.T01 | MTR_5g059430 | 40.898 | 423 | 197 | 16 | 15 | 409 | 24 | 421 | 4.56e-79 | 256 |
MsG0580029899.01.T01 | MTR_5g059430 | 34.359 | 195 | 80 | 4 | 434 | 584 | 99 | 289 | 1.53e-20 | 94.7 |
MsG0580029899.01.T01 | MTR_5g096910 | 41.093 | 421 | 196 | 15 | 7 | 411 | 6 | 390 | 8.09e-79 | 254 |
MsG0580029899.01.T01 | MTR_5g097350 | 41.905 | 420 | 197 | 15 | 1 | 410 | 1 | 383 | 8.64e-78 | 251 |
MsG0580029899.01.T01 | MTR_8g012090 | 42.386 | 394 | 158 | 12 | 1 | 385 | 1 | 334 | 1.58e-77 | 249 |
MsG0580029899.01.T01 | MTR_8g064890 | 40.515 | 427 | 191 | 14 | 6 | 411 | 1 | 385 | 4.16e-77 | 249 |
MsG0580029899.01.T01 | MTR_2g034700 | 40.633 | 411 | 186 | 14 | 9 | 407 | 5 | 369 | 6.55e-77 | 248 |
MsG0580029899.01.T01 | MTR_4g014370 | 39.437 | 426 | 213 | 16 | 8 | 410 | 2 | 405 | 1.53e-76 | 249 |
MsG0580029899.01.T01 | MTR_2g066200 | 38.443 | 411 | 220 | 14 | 6 | 410 | 1 | 384 | 2.34e-76 | 248 |
MsG0580029899.01.T01 | MTR_4g055820 | 42.820 | 383 | 172 | 11 | 7 | 371 | 4 | 357 | 6.11e-76 | 245 |
MsG0580029899.01.T01 | MTR_7g017040 | 42.180 | 422 | 201 | 15 | 4 | 411 | 3 | 395 | 7.84e-76 | 246 |
MsG0580029899.01.T01 | MTR_2g066170 | 36.893 | 412 | 225 | 12 | 6 | 411 | 1 | 383 | 2.09e-75 | 245 |
MsG0580029899.01.T01 | MTR_3g011120 | 39.320 | 412 | 189 | 15 | 7 | 403 | 4 | 369 | 6.13e-75 | 243 |
MsG0580029899.01.T01 | MTR_8g033140 | 36.971 | 449 | 216 | 13 | 1 | 413 | 1 | 418 | 6.38e-75 | 245 |
MsG0580029899.01.T01 | MTR_8g041270 | 41.121 | 428 | 200 | 16 | 7 | 411 | 5 | 403 | 1.30e-74 | 244 |
MsG0580029899.01.T01 | MTR_6g090250 | 41.235 | 405 | 194 | 13 | 35 | 409 | 29 | 419 | 4.05e-74 | 243 |
MsG0580029899.01.T01 | MTR_4g102410 | 40.930 | 430 | 207 | 16 | 1 | 410 | 44 | 446 | 1.00e-73 | 243 |
MsG0580029899.01.T01 | MTR_7g069550 | 40.380 | 421 | 191 | 16 | 10 | 406 | 7 | 391 | 4.77e-73 | 239 |
MsG0580029899.01.T01 | MTR_2g104340 | 41.026 | 429 | 190 | 18 | 7 | 411 | 4 | 393 | 1.61e-72 | 238 |
MsG0580029899.01.T01 | MTR_4g028750 | 40.369 | 379 | 199 | 11 | 15 | 388 | 14 | 370 | 3.64e-72 | 237 |
MsG0580029899.01.T01 | MTR_8g046310 | 38.298 | 423 | 199 | 14 | 6 | 413 | 2 | 377 | 4.47e-72 | 236 |
MsG0580029899.01.T01 | MTR_5g092850 | 38.588 | 425 | 204 | 14 | 14 | 415 | 13 | 403 | 1.37e-71 | 236 |
MsG0580029899.01.T01 | MTR_0831s0010 | 37.589 | 423 | 216 | 14 | 1 | 411 | 32 | 418 | 4.35e-71 | 235 |
MsG0580029899.01.T01 | MTR_1g007410 | 39.953 | 423 | 206 | 16 | 1 | 406 | 7 | 398 | 1.10e-70 | 233 |
MsG0580029899.01.T01 | MTR_8g467670 | 38.903 | 401 | 205 | 13 | 15 | 411 | 12 | 376 | 1.25e-70 | 233 |
MsG0580029899.01.T01 | MTR_5g074850 | 41.787 | 414 | 186 | 18 | 6 | 396 | 23 | 404 | 4.19e-70 | 243 |
MsG0580029899.01.T01 | MTR_5g096630 | 37.731 | 432 | 214 | 15 | 6 | 410 | 7 | 410 | 2.75e-68 | 227 |
MsG0580029899.01.T01 | MTR_5g091140 | 38.653 | 401 | 189 | 10 | 2 | 389 | 33 | 389 | 7.63e-68 | 226 |
MsG0580029899.01.T01 | MTR_5g092860 | 39.633 | 381 | 158 | 13 | 35 | 393 | 20 | 350 | 7.97e-67 | 222 |
MsG0580029899.01.T01 | MTR_2g065840 | 35.867 | 421 | 220 | 13 | 6 | 411 | 1 | 386 | 1.35e-66 | 222 |
MsG0580029899.01.T01 | MTR_6g078010 | 39.946 | 368 | 171 | 12 | 54 | 409 | 1 | 330 | 2.35e-66 | 220 |
MsG0580029899.01.T01 | MTR_1g053510 | 36.427 | 431 | 214 | 14 | 6 | 409 | 4 | 401 | 2.53e-66 | 222 |
MsG0580029899.01.T01 | MTR_8g039500 | 36.458 | 384 | 202 | 10 | 6 | 385 | 1 | 346 | 1.33e-65 | 218 |
MsG0580029899.01.T01 | MTR_1g007450 | 39.312 | 407 | 204 | 15 | 6 | 398 | 1 | 378 | 1.46e-65 | 220 |
MsG0580029899.01.T01 | MTR_6g079790 | 42.073 | 328 | 149 | 12 | 102 | 411 | 2 | 306 | 2.28e-65 | 216 |
MsG0580029899.01.T01 | MTR_5g094360 | 70.588 | 153 | 44 | 1 | 433 | 584 | 4 | 156 | 3.84e-65 | 210 |
MsG0580029899.01.T01 | MTR_5g075370 | 40.488 | 410 | 183 | 19 | 15 | 397 | 6 | 381 | 3.96e-65 | 228 |
MsG0580029899.01.T01 | MTR_7g079640 | 39.951 | 408 | 184 | 18 | 10 | 405 | 7 | 365 | 1.37e-63 | 214 |
MsG0580029899.01.T01 | MTR_7g111700 | 37.939 | 427 | 184 | 16 | 1 | 411 | 1 | 362 | 6.37e-63 | 211 |
MsG0580029899.01.T01 | MTR_2g104280 | 38.298 | 423 | 217 | 14 | 8 | 411 | 5 | 402 | 7.24e-63 | 213 |
MsG0580029899.01.T01 | MTR_2g065860 | 34.940 | 415 | 231 | 12 | 6 | 411 | 1 | 385 | 4.86e-62 | 210 |
MsG0580029899.01.T01 | MTR_5g024260 | 36.817 | 421 | 213 | 15 | 14 | 417 | 19 | 403 | 1.18e-61 | 209 |
MsG0580029899.01.T01 | MTR_8g033110 | 35.811 | 444 | 208 | 16 | 6 | 408 | 2 | 409 | 3.21e-61 | 208 |
MsG0580029899.01.T01 | MTR_8g036970 | 37.302 | 378 | 160 | 8 | 21 | 396 | 2 | 304 | 3.29e-61 | 207 |
MsG0580029899.01.T01 | MTR_8g046200 | 35.449 | 457 | 207 | 19 | 7 | 413 | 3 | 421 | 4.32e-61 | 208 |
MsG0580029899.01.T01 | MTR_8g046220 | 33.933 | 445 | 214 | 17 | 7 | 413 | 3 | 405 | 9.05e-61 | 207 |
MsG0580029899.01.T01 | MTR_8g018110 | 35.116 | 430 | 212 | 16 | 6 | 408 | 2 | 391 | 1.44e-60 | 206 |
MsG0580029899.01.T01 | MTR_8g033090 | 35.892 | 443 | 206 | 16 | 6 | 408 | 2 | 406 | 1.61e-60 | 206 |
MsG0580029899.01.T01 | MTR_2g064950 | 36.905 | 420 | 199 | 14 | 11 | 406 | 4 | 381 | 4.09e-60 | 205 |
MsG0580029899.01.T01 | MTR_4g007940 | 39.067 | 343 | 157 | 13 | 90 | 411 | 28 | 339 | 5.49e-60 | 203 |
MsG0580029899.01.T01 | MTR_2g066150 | 33.981 | 412 | 209 | 11 | 6 | 410 | 1 | 356 | 8.31e-60 | 203 |
MsG0580029899.01.T01 | MTR_8g032980 | 34.598 | 448 | 211 | 16 | 10 | 411 | 7 | 418 | 2.18e-59 | 204 |
MsG0580029899.01.T01 | MTR_8g013000 | 39.541 | 392 | 167 | 18 | 11 | 374 | 4 | 353 | 6.52e-59 | 202 |
MsG0580029899.01.T01 | MTR_8g063330 | 37.500 | 376 | 186 | 13 | 6 | 366 | 1 | 342 | 7.87e-59 | 204 |
MsG0580029899.01.T01 | MTR_5g072060 | 39.119 | 386 | 184 | 13 | 16 | 392 | 5 | 348 | 1.35e-58 | 206 |
MsG0580029899.01.T01 | MTR_1g098180 | 34.279 | 423 | 186 | 13 | 10 | 411 | 12 | 363 | 1.42e-58 | 200 |
MsG0580029899.01.T01 | MTR_1g007430 | 40.223 | 358 | 163 | 12 | 28 | 374 | 7 | 324 | 3.70e-58 | 197 |
MsG0580029899.01.T01 | MTR_7g104710 | 40.294 | 340 | 137 | 10 | 1 | 330 | 1 | 284 | 1.14e-57 | 196 |
MsG0580029899.01.T01 | MTR_5g096900 | 40.057 | 352 | 155 | 12 | 6 | 340 | 1 | 313 | 3.78e-57 | 195 |
MsG0580029899.01.T01 | MTR_7g016930 | 39.143 | 350 | 160 | 11 | 4 | 348 | 3 | 304 | 1.89e-56 | 193 |
MsG0580029899.01.T01 | MTR_6g087620 | 39.939 | 328 | 135 | 10 | 90 | 404 | 1 | 279 | 1.52e-54 | 186 |
MsG0580029899.01.T01 | MTR_5g022850 | 38.482 | 382 | 175 | 21 | 54 | 411 | 5 | 350 | 5.39e-53 | 185 |
MsG0580029899.01.T01 | MTR_8g064790 | 35.322 | 419 | 173 | 13 | 6 | 411 | 1 | 334 | 5.53e-53 | 184 |
MsG0580029899.01.T01 | MTR_5g043605 | 35.735 | 347 | 181 | 14 | 70 | 411 | 27 | 336 | 3.93e-52 | 183 |
MsG0580029899.01.T01 | MTR_6g090260 | 51.064 | 188 | 83 | 4 | 230 | 409 | 73 | 259 | 1.25e-51 | 178 |
MsG0580029899.01.T01 | MTR_6g090260 | 64.179 | 67 | 21 | 2 | 1 | 64 | 1 | 67 | 6.53e-15 | 75.5 |
MsG0580029899.01.T01 | MTR_5g074800 | 37.203 | 379 | 167 | 15 | 56 | 406 | 1 | 336 | 1.81e-51 | 180 |
MsG0580029899.01.T01 | MTR_7g023800 | 36.490 | 359 | 162 | 11 | 56 | 405 | 1 | 302 | 8.17e-49 | 172 |
MsG0580029899.01.T01 | MTR_6g004450 | 44.269 | 253 | 120 | 9 | 167 | 410 | 25 | 265 | 7.89e-48 | 168 |
MsG0580029899.01.T01 | MTR_8g063370 | 32.678 | 407 | 223 | 16 | 8 | 405 | 19 | 383 | 1.92e-47 | 171 |
MsG0580029899.01.T01 | MTR_6g070880 | 42.471 | 259 | 124 | 9 | 1 | 250 | 15 | 257 | 6.67e-45 | 160 |
MsG0580029899.01.T01 | MTR_6g071420 | 42.471 | 259 | 124 | 9 | 1 | 250 | 15 | 257 | 6.67e-45 | 160 |
MsG0580029899.01.T01 | MTR_2g021920 | 44.068 | 236 | 110 | 10 | 193 | 410 | 38 | 269 | 9.95e-45 | 160 |
MsG0580029899.01.T01 | MTR_5g086590 | 40.244 | 246 | 117 | 9 | 150 | 390 | 13 | 233 | 1.98e-44 | 158 |
MsG0580029899.01.T01 | MTR_6g465360 | 41.897 | 253 | 115 | 9 | 2 | 240 | 47 | 281 | 1.28e-42 | 155 |
MsG0580029899.01.T01 | MTR_1g050312 | 34.314 | 306 | 142 | 10 | 90 | 389 | 16 | 268 | 4.60e-41 | 150 |
MsG0580029899.01.T01 | MTR_5g068490 | 34.385 | 317 | 154 | 11 | 99 | 411 | 8 | 274 | 2.15e-40 | 148 |
MsG0580029899.01.T01 | MTR_8g063350 | 31.202 | 391 | 181 | 15 | 9 | 389 | 6 | 318 | 7.46e-40 | 149 |
MsG0580029899.01.T01 | MTR_5g097820 | 34.471 | 293 | 151 | 9 | 6 | 288 | 8 | 269 | 1.35e-38 | 143 |
MsG0580029899.01.T01 | MTR_5g097820 | 34.921 | 189 | 74 | 2 | 437 | 584 | 89 | 269 | 1.49e-24 | 103 |
MsG0580029899.01.T01 | MTR_1g076810 | 33.429 | 347 | 179 | 13 | 1 | 342 | 1 | 300 | 2.64e-38 | 150 |
MsG0580029899.01.T01 | MTR_4g014370 | 43.564 | 202 | 99 | 7 | 218 | 410 | 138 | 333 | 8.00e-38 | 143 |
MsG0580029899.01.T01 | MTR_4g014370 | 41.525 | 118 | 67 | 2 | 1 | 116 | 6 | 123 | 5.60e-17 | 82.8 |
MsG0580029899.01.T01 | MTR_8g063310 | 30.824 | 425 | 218 | 19 | 8 | 405 | 13 | 388 | 1.75e-37 | 144 |
MsG0580029899.01.T01 | MTR_1g050308 | 38.583 | 254 | 112 | 9 | 3 | 249 | 20 | 236 | 3.06e-37 | 142 |
MsG0580029899.01.T01 | MTR_1g050308 | 38.393 | 112 | 65 | 3 | 303 | 411 | 234 | 344 | 1.15e-13 | 73.2 |
MsG0580029899.01.T01 | MTR_5g023970 | 44.385 | 187 | 95 | 5 | 230 | 410 | 9 | 192 | 8.30e-37 | 136 |
MsG0580029899.01.T01 | MTR_4g016000 | 39.301 | 229 | 93 | 8 | 155 | 372 | 2 | 195 | 1.25e-36 | 136 |
MsG0580029899.01.T01 | MTR_5g037190 | 34.812 | 293 | 144 | 8 | 3 | 291 | 2 | 251 | 3.17e-36 | 136 |
MsG0580029899.01.T01 | MTR_3g018750 | 41.393 | 244 | 107 | 10 | 193 | 410 | 4 | 237 | 3.98e-36 | 135 |
MsG0580029899.01.T01 | MTR_5g097850 | 45.213 | 188 | 82 | 6 | 237 | 411 | 63 | 242 | 5.41e-36 | 135 |
MsG0580029899.01.T01 | MTR_2g104260 | 36.120 | 299 | 157 | 8 | 7 | 296 | 4 | 277 | 8.04e-35 | 133 |
MsG0580029899.01.T01 | MTR_6g009350 | 43.523 | 193 | 101 | 7 | 190 | 378 | 6 | 194 | 1.60e-34 | 129 |
MsG0580029899.01.T01 | MTR_5g066420 | 47.651 | 149 | 70 | 4 | 263 | 403 | 1 | 149 | 3.77e-34 | 127 |
MsG0580029899.01.T01 | MTR_8g035690 | 37.358 | 265 | 121 | 9 | 180 | 411 | 48 | 300 | 1.58e-33 | 130 |
MsG0580029899.01.T01 | MTR_8g033000 | 30.100 | 402 | 195 | 14 | 54 | 411 | 1 | 360 | 3.68e-33 | 130 |
MsG0580029899.01.T01 | MTR_6g079730 | 50.355 | 141 | 64 | 3 | 275 | 409 | 5 | 145 | 9.52e-33 | 123 |
MsG0580029899.01.T01 | MTR_3g030620 | 43.210 | 162 | 80 | 5 | 260 | 411 | 20 | 179 | 2.73e-30 | 117 |
MsG0580029899.01.T01 | MTR_8g073570 | 37.688 | 199 | 94 | 8 | 6 | 203 | 1 | 170 | 5.88e-29 | 113 |
MsG0580029899.01.T01 | MTR_5g097650 | 41.040 | 173 | 74 | 4 | 2 | 174 | 12 | 156 | 3.72e-27 | 107 |
MsG0580029899.01.T01 | MTR_5g098950 | 36.797 | 231 | 94 | 8 | 151 | 374 | 89 | 274 | 4.44e-27 | 111 |
MsG0580029899.01.T01 | MTR_7g017150 | 42.353 | 170 | 92 | 5 | 231 | 397 | 81 | 247 | 1.44e-26 | 109 |
MsG0580029899.01.T01 | MTR_7g017120 | 41.111 | 180 | 97 | 6 | 224 | 397 | 70 | 246 | 3.59e-26 | 108 |
MsG0580029899.01.T01 | MTR_5g096920 | 42.308 | 156 | 80 | 5 | 263 | 413 | 1 | 151 | 4.48e-26 | 104 |
MsG0580029899.01.T01 | MTR_7g019250 | 36.493 | 211 | 102 | 7 | 193 | 393 | 225 | 413 | 2.23e-25 | 110 |
MsG0580029899.01.T01 | MTR_5g097540 | 32.083 | 240 | 146 | 7 | 143 | 379 | 13 | 238 | 2.33e-24 | 103 |
MsG0580029899.01.T01 | MTR_2g022020 | 50.000 | 102 | 50 | 1 | 310 | 410 | 15 | 116 | 9.78e-23 | 94.0 |
MsG0580029899.01.T01 | MTR_3g019290 | 33.333 | 228 | 89 | 7 | 14 | 238 | 11 | 178 | 3.30e-22 | 94.7 |
MsG0580029899.01.T01 | MTR_5g096070 | 36.747 | 166 | 62 | 5 | 6 | 169 | 15 | 139 | 4.13e-22 | 93.6 |
MsG0580029899.01.T01 | MTR_5g091150 | 34.728 | 239 | 83 | 11 | 102 | 323 | 2 | 184 | 4.66e-22 | 94.7 |
MsG0580029899.01.T01 | MTR_5g097660 | 47.788 | 113 | 55 | 3 | 302 | 410 | 4 | 116 | 3.78e-21 | 89.7 |
MsG0580029899.01.T01 | MTR_8g041440 | 45.690 | 116 | 37 | 2 | 9 | 117 | 7 | 103 | 4.08e-21 | 89.4 |
MsG0580029899.01.T01 | MTR_4g133170 | 25.418 | 299 | 177 | 13 | 128 | 408 | 89 | 359 | 3.33e-20 | 93.6 |
MsG0580029899.01.T01 | MTR_7g101200 | 32.365 | 241 | 120 | 9 | 142 | 377 | 30 | 232 | 4.28e-20 | 90.1 |
MsG0580029899.01.T01 | MTR_2g028130 | 23.645 | 406 | 233 | 15 | 20 | 392 | 8 | 369 | 2.49e-19 | 90.9 |
MsG0580029899.01.T01 | MTR_2g028160 | 23.614 | 415 | 258 | 17 | 20 | 409 | 8 | 388 | 1.51e-18 | 88.6 |
MsG0580029899.01.T01 | MTR_5g036250 | 43.750 | 112 | 57 | 3 | 313 | 422 | 8 | 115 | 2.34e-18 | 83.6 |
MsG0580029899.01.T01 | MTR_1g068835 | 23.590 | 390 | 233 | 13 | 15 | 392 | 2 | 338 | 2.92e-18 | 87.4 |
MsG0580029899.01.T01 | MTR_5g096050 | 44.444 | 108 | 49 | 3 | 263 | 359 | 1 | 108 | 4.18e-18 | 80.9 |
MsG0580029899.01.T01 | MTR_2g426070 | 24.060 | 399 | 254 | 15 | 25 | 409 | 14 | 377 | 1.17e-17 | 85.9 |
MsG0580029899.01.T01 | MTR_6g087660 | 58.228 | 79 | 30 | 2 | 1 | 76 | 1 | 79 | 2.14e-17 | 81.3 |
MsG0580029899.01.T01 | MTR_5g086780 | 48.515 | 101 | 48 | 2 | 292 | 388 | 124 | 224 | 3.30e-17 | 81.6 |
MsG0580029899.01.T01 | MTR_5g086780 | 40.945 | 127 | 47 | 3 | 3 | 129 | 2 | 100 | 1.36e-13 | 70.9 |
MsG0580029899.01.T01 | MTR_4g023080 | 23.472 | 409 | 242 | 14 | 10 | 410 | 2 | 347 | 7.14e-17 | 82.8 |
MsG0580029899.01.T01 | MTR_2g031720 | 23.604 | 394 | 224 | 15 | 20 | 392 | 9 | 346 | 9.27e-17 | 83.2 |
MsG0580029899.01.T01 | MTR_3g047580 | 35.625 | 160 | 64 | 6 | 8 | 164 | 4 | 127 | 1.29e-16 | 77.0 |
MsG0580029899.01.T01 | MTR_0667s0010 | 23.940 | 401 | 237 | 16 | 20 | 395 | 9 | 366 | 2.36e-16 | 82.0 |
MsG0580029899.01.T01 | MTR_4g116330 | 25.467 | 428 | 238 | 21 | 2 | 410 | 8 | 373 | 5.69e-16 | 80.5 |
MsG0580029899.01.T01 | MTR_2g031640 | 25.253 | 297 | 177 | 12 | 129 | 409 | 92 | 359 | 8.27e-16 | 80.1 |
MsG0580029899.01.T01 | MTR_2g024110 | 21.981 | 414 | 248 | 16 | 17 | 409 | 4 | 363 | 1.00e-15 | 79.7 |
MsG0580029899.01.T01 | MTR_0115s0020 | 24.800 | 375 | 207 | 15 | 20 | 367 | 13 | 339 | 1.56e-15 | 79.3 |
MsG0580029899.01.T01 | MTR_1g037540 | 25.000 | 364 | 198 | 13 | 20 | 350 | 8 | 329 | 1.65e-15 | 79.3 |
MsG0580029899.01.T01 | MTR_2g026010 | 26.523 | 279 | 158 | 16 | 129 | 388 | 90 | 340 | 5.71e-15 | 77.4 |
MsG0580029899.01.T01 | MTR_2g426060 | 23.096 | 407 | 257 | 17 | 20 | 409 | 9 | 376 | 6.12e-15 | 77.4 |
MsG0580029899.01.T01 | MTR_4g094400 | 42.857 | 105 | 46 | 2 | 260 | 350 | 7 | 111 | 8.63e-15 | 71.6 |
MsG0580029899.01.T01 | MTR_3g083010 | 21.845 | 412 | 238 | 17 | 20 | 392 | 9 | 375 | 9.67e-15 | 77.0 |
MsG0580029899.01.T01 | MTR_4g023090 | 25.065 | 383 | 213 | 16 | 6 | 372 | 2 | 326 | 1.10e-14 | 76.6 |
MsG0580029899.01.T01 | MTR_4g019990 | 23.596 | 356 | 217 | 12 | 13 | 353 | 2 | 317 | 1.33e-14 | 76.3 |
MsG0580029899.01.T01 | MTR_4g021785 | 23.058 | 412 | 241 | 15 | 10 | 410 | 2 | 348 | 2.55e-14 | 75.1 |
MsG0580029899.01.T01 | MTR_3g009310 | 23.324 | 373 | 217 | 12 | 20 | 380 | 45 | 360 | 3.31e-14 | 75.1 |
MsG0580029899.01.T01 | MTR_1g055135 | 23.699 | 346 | 201 | 12 | 16 | 351 | 12 | 304 | 3.75e-14 | 74.7 |
MsG0580029899.01.T01 | MTR_5g070088 | 24.408 | 422 | 251 | 15 | 12 | 410 | 2 | 378 | 5.24e-14 | 74.3 |
MsG0580029899.01.T01 | MTR_4g023130 | 23.864 | 264 | 159 | 9 | 153 | 410 | 79 | 306 | 7.09e-14 | 73.2 |
MsG0580029899.01.T01 | MTR_4g030830 | 25.205 | 365 | 201 | 14 | 10 | 352 | 2 | 316 | 1.46e-13 | 73.2 |
MsG0580029899.01.T01 | MTR_4g070550 | 22.791 | 430 | 241 | 21 | 20 | 412 | 8 | 383 | 1.79e-13 | 72.8 |
MsG0580029899.01.T01 | MTR_3g047540 | 42.697 | 89 | 44 | 3 | 228 | 316 | 2 | 83 | 1.98e-13 | 66.6 |
MsG0580029899.01.T01 | MTR_5g097210 | 23.888 | 427 | 243 | 19 | 10 | 418 | 2 | 364 | 2.66e-13 | 72.0 |
MsG0580029899.01.T01 | MTR_0064s0160 | 24.038 | 416 | 254 | 21 | 16 | 408 | 41 | 417 | 6.10e-13 | 71.6 |
MsG0580029899.01.T01 | MTR_2g046900 | 24.155 | 414 | 236 | 21 | 16 | 408 | 27 | 383 | 8.60e-13 | 70.9 |
MsG0580029899.01.T01 | MTR_2g025420 | 23.383 | 402 | 244 | 18 | 20 | 392 | 9 | 375 | 2.46e-12 | 69.7 |
MsG0580029899.01.T01 | MTR_1g097490 | 24.346 | 382 | 224 | 16 | 3 | 378 | 35 | 357 | 2.48e-12 | 69.3 |
MsG0580029899.01.T01 | MTR_4g023440 | 21.823 | 417 | 220 | 13 | 2 | 410 | 7 | 325 | 2.55e-12 | 68.9 |
MsG0580029899.01.T01 | MTR_7g077970 | 26.257 | 358 | 204 | 15 | 17 | 352 | 7 | 326 | 2.90e-12 | 69.3 |
MsG0580029899.01.T01 | MTR_1g050542 | 23.134 | 402 | 239 | 17 | 19 | 408 | 60 | 403 | 4.31e-12 | 68.6 |
MsG0580029899.01.T01 | MTR_2g028140 | 20.782 | 409 | 248 | 15 | 20 | 394 | 8 | 374 | 4.42e-12 | 68.6 |
MsG0580029899.01.T01 | MTR_5g049560 | 31.013 | 158 | 92 | 5 | 54 | 206 | 1 | 146 | 4.90e-12 | 67.0 |
MsG0580029899.01.T01 | MTR_3g013740 | 25.210 | 357 | 210 | 16 | 6 | 352 | 33 | 342 | 5.08e-12 | 68.6 |
MsG0580029899.01.T01 | MTR_4g023120 | 22.917 | 336 | 204 | 12 | 20 | 352 | 6 | 289 | 5.26e-12 | 68.2 |
MsG0580029899.01.T01 | MTR_4g023070 | 22.619 | 336 | 205 | 13 | 20 | 352 | 6 | 289 | 8.45e-12 | 67.4 |
MsG0580029899.01.T01 | MTR_4g023380 | 21.281 | 437 | 246 | 13 | 1 | 410 | 5 | 370 | 9.30e-12 | 67.4 |
MsG0580029899.01.T01 | MTR_2g031680 | 22.604 | 407 | 239 | 14 | 19 | 411 | 8 | 352 | 1.81e-11 | 66.6 |
MsG0580029899.01.T01 | MTR_3g097190 | 40.845 | 71 | 41 | 1 | 320 | 389 | 11 | 81 | 2.05e-11 | 63.5 |
MsG0580029899.01.T01 | MTR_1g088120 | 23.798 | 416 | 233 | 16 | 16 | 390 | 9 | 381 | 5.40e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029899.01.T01 | AT3G06240 | 23.913 | 368 | 195 | 16 | 20 | 351 | 39 | 357 | 4.36e-12 | 68.9 |
MsG0580029899.01.T01 | AT4G12560 | 23.155 | 393 | 237 | 15 | 20 | 394 | 7 | 352 | 1.54e-11 | 67.0 |
MsG0580029899.01.T01 | AT4G12560 | 23.155 | 393 | 237 | 15 | 20 | 394 | 7 | 352 | 1.54e-11 | 67.0 |
MsG0580029899.01.T01 | AT4G12560 | 23.155 | 393 | 237 | 15 | 20 | 394 | 7 | 352 | 1.54e-11 | 67.0 |
Find 99 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTGTAACATATCAATTT+TGG | 0.082390 | 5:+103718688 | MsG0580029899.01.T01:CDS |
TGGATTAAACTCTTCATTAT+TGG | 0.166420 | 5:+103718734 | MsG0580029899.01.T01:CDS |
AGTAGTTATGTTTGTGGATT+TGG | 0.216850 | 5:+103718260 | MsG0580029899.01.T01:CDS |
AATACAACTCAAATGTTTCT+TGG | 0.262437 | 5:-103719642 | None:intergenic |
TCCAGACAAAGACTTGTTTA+TGG | 0.269287 | 5:+103717938 | MsG0580029899.01.T01:CDS |
GGATTAAACTCTTCATTATT+GGG | 0.271059 | 5:+103718735 | MsG0580029899.01.T01:CDS |
GAAGCTTCGGCTAATCATTA+TGG | 0.271479 | 5:+103719895 | MsG0580029899.01.T01:CDS |
AAACAATTGGTGGTGTTAAA+TGG | 0.283938 | 5:+103718629 | MsG0580029899.01.T01:CDS |
TCGGCTAATCATTATGGATT+TGG | 0.293501 | 5:+103719901 | MsG0580029899.01.T01:CDS |
CATTGCGTTGAAGAACCTTT+TGG | 0.303435 | 5:+103718764 | MsG0580029899.01.T01:CDS |
CTTCCTTCTTGAAATGGATT+TGG | 0.306881 | 5:-103718017 | None:intergenic |
ATTATATGTCTCCAATATTA+AGG | 0.310039 | 5:-103720031 | None:intergenic |
GATCAAGCACCTCAATCATT+TGG | 0.316284 | 5:-103718853 | None:intergenic |
ATATTGGAGACATATAATTT+AGG | 0.316866 | 5:+103720036 | MsG0580029899.01.T01:CDS |
CCAGACAAAGACTTGTTTAT+GGG | 0.322451 | 5:+103717939 | MsG0580029899.01.T01:CDS |
GTTGAGGAAAATTGTGGTAT+AGG | 0.330906 | 5:-103718446 | None:intergenic |
TGTGTACAATTCTACATTGA+TGG | 0.336243 | 5:+103720111 | MsG0580029899.01.T01:CDS |
GAGATACACCTGAACCCTTT+TGG | 0.345967 | 5:+103718372 | MsG0580029899.01.T01:CDS |
GTTTCACTTCCTTCTTGAAA+TGG | 0.355718 | 5:-103718023 | None:intergenic |
CAATATGCTTCACACGTCTA+TGG | 0.357916 | 5:+103720086 | MsG0580029899.01.T01:CDS |
AGAATAAATTCAAATTAGAT+TGG | 0.370848 | 5:+103719686 | MsG0580029899.01.T01:CDS |
AATCGCTTCAAAGATTTAAT+CGG | 0.374251 | 5:-103717786 | None:intergenic |
GCCCCGTTCCCTCATTGTAT+TGG | 0.381467 | 5:+103718335 | MsG0580029899.01.T01:CDS |
ACATTGATGGATTCTCTAAT+CGG | 0.382088 | 5:+103720124 | MsG0580029899.01.T01:CDS |
CCAAATCTAAAATATCAAAA+TGG | 0.386925 | 5:-103718061 | None:intergenic |
GGTAATATCATCATGTATAT+AGG | 0.392761 | 5:-103717742 | None:intergenic |
TAGACTGTATATCTTCCAAA+AGG | 0.410767 | 5:-103718387 | None:intergenic |
ATCAAGCACCTCAATCATTT+GGG | 0.412255 | 5:-103718852 | None:intergenic |
ATGATGTAAGATTTGCACTA+TGG | 0.413007 | 5:+103718138 | MsG0580029899.01.T01:CDS |
TTAGCATGAGCGATACATTA+TGG | 0.413016 | 5:-103717905 | None:intergenic |
ACCTTGAATTCGTCTGTAGT+TGG | 0.415489 | 5:-103718164 | None:intergenic |
TTCAAATTTCTCGCCAGAAA+AGG | 0.416972 | 5:-103717973 | None:intergenic |
TATATCTTCCAAAAGGGTTC+AGG | 0.417780 | 5:-103718380 | None:intergenic |
CAAGTAGGTACAAAATCAAA+AGG | 0.419031 | 5:-103719871 | None:intergenic |
TTGTTCTTCATATGTGATCA+AGG | 0.420764 | 5:-103718660 | None:intergenic |
CATTCAAGTAGTTATGTTTG+TGG | 0.420989 | 5:+103718254 | MsG0580029899.01.T01:CDS |
ATTAAATCTTTGAAGCGATT+CGG | 0.428852 | 5:+103717789 | MsG0580029899.01.T01:CDS |
AACCAATACAATGAGGGAAC+GGG | 0.428878 | 5:-103718337 | None:intergenic |
CCCATAAACAAGTCTTTGTC+TGG | 0.434353 | 5:-103717939 | None:intergenic |
ATAATTTAGGAAGTAACTCT+TGG | 0.436775 | 5:+103720049 | MsG0580029899.01.T01:CDS |
TCATCTATGTCTGAGGGTAT+TGG | 0.436979 | 5:-103718590 | None:intergenic |
TGTACCTACTTGGGAAGCTT+CGG | 0.437427 | 5:+103719882 | MsG0580029899.01.T01:CDS |
AAGGAAGACCTTCTTCCAAT+TGG | 0.437501 | 5:+103718908 | MsG0580029899.01.T01:CDS |
TTCTAAATTTGAATCAAAGT+TGG | 0.443033 | 5:+103718529 | MsG0580029899.01.T01:CDS |
AACTAAGTGTAAAAGATTCA+TGG | 0.445293 | 5:+103718714 | MsG0580029899.01.T01:CDS |
TGTATTGGTTATAAGCCATT+GGG | 0.464185 | 5:+103718350 | MsG0580029899.01.T01:CDS |
TCATTCCTCATAGCTCGAAT+AGG | 0.465199 | 5:+103718186 | MsG0580029899.01.T01:CDS |
TTGTATTGGTTATAAGCCAT+TGG | 0.473577 | 5:+103718349 | MsG0580029899.01.T01:CDS |
TCAAAATGGTGGAGACGATA+AGG | 0.476696 | 5:-103718047 | None:intergenic |
ATTGAGGTGCTTGATCTTGA+AGG | 0.477635 | 5:+103718860 | MsG0580029899.01.T01:CDS |
TGGTAAAAGATATCTTCATT+TGG | 0.480961 | 5:-103720006 | None:intergenic |
ACAGTCTAAGAAGTAACTCT+TGG | 0.483295 | 5:+103718402 | MsG0580029899.01.T01:CDS |
CTTAAGAACCCAAATGATTG+AGG | 0.484022 | 5:+103718844 | MsG0580029899.01.T01:CDS |
GATACATTATGGTGATAAGA+AGG | 0.484424 | 5:-103717894 | None:intergenic |
TTACCCTTTGTCATTCCAAA+AGG | 0.484501 | 5:-103718779 | None:intergenic |
TTATTCCACCAATTGGAAGA+AGG | 0.496695 | 5:-103718916 | None:intergenic |
AAGGACAAGGTGTACATGAA+TGG | 0.498476 | 5:+103718470 | MsG0580029899.01.T01:CDS |
TCGAATAGGATTCATCCGTT+TGG | 0.500383 | 5:+103718200 | MsG0580029899.01.T01:CDS |
CTTCATTTGGATGTGCATCA+AGG | 0.501816 | 5:-103719993 | None:intergenic |
TGGCTAGCATTTGCACCAAA+CGG | 0.506864 | 5:-103718215 | None:intergenic |
GTCTAAGAAGTAACTCTTGG+AGG | 0.508633 | 5:+103718405 | MsG0580029899.01.T01:CDS |
TGTGACTGCGACGCAAGAAA+AGG | 0.513375 | 5:+103717713 | MsG0580029899.01.T01:CDS |
AATTCAAATTAGATTGGCCA+AGG | 0.516363 | 5:+103719692 | MsG0580029899.01.T01:CDS |
TCCAACTACAGACGAATTCA+AGG | 0.521951 | 5:+103718163 | MsG0580029899.01.T01:CDS |
ACAAAATCAAAAGGGTATTG+AGG | 0.531448 | 5:-103719862 | None:intergenic |
AAAAGTGAAATACATAATGA+AGG | 0.534814 | 5:+103720153 | MsG0580029899.01.T01:CDS |
TCCTTAGTTGAGGAAAATTG+TGG | 0.540217 | 5:-103718452 | None:intergenic |
AATGAAAATTAATCACATCA+TGG | 0.543580 | 5:-103718235 | None:intergenic |
ACATGAATGGAATATGTCAT+TGG | 0.548455 | 5:+103718483 | MsG0580029899.01.T01:CDS |
TTGTGATATAGCACTTTACA+AGG | 0.550908 | 5:+103718889 | MsG0580029899.01.T01:CDS |
TCGGATGCGTACGTAAATCA+TGG | 0.565510 | 5:+103717808 | MsG0580029899.01.T01:CDS |
GTACACCTTGTCCTTAGTTG+AGG | 0.568249 | 5:-103718462 | None:intergenic |
ACTAAATCTAACTTCACCCT+TGG | 0.570120 | 5:-103719709 | None:intergenic |
ACATCATTGTTCTAGTCGGA+TGG | 0.571429 | 5:-103720186 | None:intergenic |
AATCTAAAATATCAAAATGG+TGG | 0.576094 | 5:-103718058 | None:intergenic |
AGACTGTATATCTTCCAAAA+GGG | 0.576936 | 5:-103718386 | None:intergenic |
CGTCAGATAAGATATTGTTA+CGG | 0.580938 | 5:-103717869 | None:intergenic |
TGAATCCTATTCGAGCTATG+AGG | 0.581333 | 5:-103718191 | None:intergenic |
ATACCCTCAGACATAGATGA+TGG | 0.590041 | 5:+103718593 | MsG0580029899.01.T01:CDS |
AAGTAGGTACAAAATCAAAA+GGG | 0.591961 | 5:-103719870 | None:intergenic |
ATGTGCATCAAGGTCATGAT+CGG | 0.594993 | 5:-103719983 | None:intergenic |
TAACCAATACAATGAGGGAA+CGG | 0.595155 | 5:-103718338 | None:intergenic |
GGCTTATAACCAATACAATG+AGG | 0.600440 | 5:-103718344 | None:intergenic |
CTACCAAATCCATTTCAAGA+AGG | 0.602171 | 5:+103718014 | MsG0580029899.01.T01:CDS |
GGTTCTTCAACGCAATGCAA+CGG | 0.602823 | 5:-103718758 | None:intergenic |
GTCATTTGATTTGAACAAAG+AGG | 0.605022 | 5:+103718553 | MsG0580029899.01.T01:CDS |
GCTTATAACCAATACAATGA+GGG | 0.606557 | 5:-103718343 | None:intergenic |
GAAAACATCATTGTTCTAGT+CGG | 0.606881 | 5:-103720190 | None:intergenic |
AGAGCCATCATCTATGTCTG+AGG | 0.611199 | 5:-103718597 | None:intergenic |
ATACATTATGGTGATAAGAA+GGG | 0.613357 | 5:-103717893 | None:intergenic |
GAGCCATCATCTATGTCTGA+GGG | 0.616204 | 5:-103718596 | None:intergenic |
TTAGCCGAAGCTTCCCAAGT+AGG | 0.629270 | 5:-103719886 | None:intergenic |
GGTTCAGGTGTATCTCCCAA+TGG | 0.640950 | 5:-103718365 | None:intergenic |
ATTCAAATTAGATTGGCCAA+GGG | 0.648505 | 5:+103719693 | MsG0580029899.01.T01:CDS |
ACTGCGACGCAAGAAAAGGT+TGG | 0.657677 | 5:+103717717 | MsG0580029899.01.T01:CDS |
ACCAATACAATGAGGGAACG+GGG | 0.659399 | 5:-103718336 | None:intergenic |
ATGTCTCCAATATTAAGGAG+TGG | 0.668063 | 5:-103720026 | None:intergenic |
TATGTCTGAGGGTATTGGTG+TGG | 0.696463 | 5:-103718585 | None:intergenic |
GTATCGCTCATGCTAATGCG+TGG | 0.732874 | 5:+103717912 | MsG0580029899.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCATTTACAATTTTTTTTA+AGG | + | Chr5:103719409-103719428 | MsG0580029899.01.T01:intron | 10.0% |
!! | AGAATAAATTCAAATTAGAT+TGG | + | Chr5:103719686-103719705 | MsG0580029899.01.T01:CDS | 15.0% |
!! | ATGATTTATGTTATTGAATA+TGG | + | Chr5:103718977-103718996 | MsG0580029899.01.T01:intron | 15.0% |
!!! | ATTTTGGTTTTGATATTTTA+AGG | + | Chr5:103719747-103719766 | MsG0580029899.01.T01:intron | 15.0% |
!!! | CATTTTGATATTTTAGATTT+GGG | + | Chr5:103718062-103718081 | MsG0580029899.01.T01:CDS | 15.0% |
!! | AAAAGTGAAATACATAATGA+AGG | + | Chr5:103720153-103720172 | MsG0580029899.01.T01:CDS | 20.0% |
!! | AATGAAAATTAATCACATCA+TGG | - | Chr5:103718238-103718257 | None:intergenic | 20.0% |
!! | ACTAATTTCTTTATATAGAG+AGG | - | Chr5:103719152-103719171 | None:intergenic | 20.0% |
!! | AGAAAGACAGAAAAATAAAT+TGG | + | Chr5:103718816-103718835 | MsG0580029899.01.T01:CDS | 20.0% |
!! | ATATTGGAGACATATAATTT+AGG | + | Chr5:103720036-103720055 | MsG0580029899.01.T01:CDS | 20.0% |
!! | ATTATATGTCTCCAATATTA+AGG | - | Chr5:103720034-103720053 | None:intergenic | 20.0% |
!! | CAAGAATTAAGATAAATTGT+TGG | - | Chr5:103719237-103719256 | None:intergenic | 20.0% |
!! | GTTACATAAATAAATTCACA+GGG | + | Chr5:103719539-103719558 | MsG0580029899.01.T01:intron | 20.0% |
!! | TTCTAAATTTGAATCAAAGT+TGG | + | Chr5:103718529-103718548 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | AATCTAAAATATCAAAATGG+TGG | - | Chr5:103718061-103718080 | None:intergenic | 20.0% |
!!! | ACTTGTAACATATCAATTTT+GGG | + | Chr5:103718689-103718708 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | CCAAATCTAAAATATCAAAA+TGG | - | Chr5:103718064-103718083 | None:intergenic | 20.0% |
!!! | CCATTTTGATATTTTAGATT+TGG | + | Chr5:103718061-103718080 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | CTCTTATTTTGAAAAACAAT+TGG | + | Chr5:103718616-103718635 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | TAATTTTGATAGAATTGAGA+AGG | - | Chr5:103717766-103717785 | None:intergenic | 20.0% |
!!! | TACTTGTAACATATCAATTT+TGG | + | Chr5:103718688-103718707 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | TTATTTTGAAAAACAATTGG+TGG | + | Chr5:103718619-103718638 | MsG0580029899.01.T01:CDS | 20.0% |
!!! | TTTGAGTTGTATTTTGTTTT+TGG | + | Chr5:103719652-103719671 | MsG0580029899.01.T01:CDS | 20.0% |
! | AAAGATACGCAAATATATAG+CGG | - | Chr5:103719354-103719373 | None:intergenic | 25.0% |
! | AACTAAGTGTAAAAGATTCA+TGG | + | Chr5:103718714-103718733 | MsG0580029899.01.T01:CDS | 25.0% |
! | AAGTAGGTACAAAATCAAAA+GGG | - | Chr5:103719873-103719892 | None:intergenic | 25.0% |
! | AATACAACTCAAATGTTTCT+TGG | - | Chr5:103719645-103719664 | None:intergenic | 25.0% |
! | AATCGCTTCAAAGATTTAAT+CGG | - | Chr5:103717789-103717808 | None:intergenic | 25.0% |
! | ACATAAATCATCACATTTCT+AGG | - | Chr5:103718968-103718987 | None:intergenic | 25.0% |
! | ATAATTTAGGAAGTAACTCT+TGG | + | Chr5:103720049-103720068 | MsG0580029899.01.T01:CDS | 25.0% |
! | ATACATTATGGTGATAAGAA+GGG | - | Chr5:103717896-103717915 | None:intergenic | 25.0% |
! | GGATTAAACTCTTCATTATT+GGG | + | Chr5:103718735-103718754 | MsG0580029899.01.T01:CDS | 25.0% |
! | GGTAATATCATCATGTATAT+AGG | - | Chr5:103717745-103717764 | None:intergenic | 25.0% |
! | GGTTACATAAATAAATTCAC+AGG | + | Chr5:103719538-103719557 | MsG0580029899.01.T01:intron | 25.0% |
! | TACTTATTTATTCCACCAAT+TGG | - | Chr5:103718926-103718945 | None:intergenic | 25.0% |
! | TGAATTTGATTCAAGCTTTA+TGG | + | Chr5:103719095-103719114 | MsG0580029899.01.T01:intron | 25.0% |
! | TGGATTAAACTCTTCATTAT+TGG | + | Chr5:103718734-103718753 | MsG0580029899.01.T01:CDS | 25.0% |
! | TGGTAAAAGATATCTTCATT+TGG | - | Chr5:103720009-103720028 | None:intergenic | 25.0% |
!! | GAGTTTCAATTTCATTTTGA+CGG | + | Chr5:103719610-103719629 | MsG0580029899.01.T01:CDS | 25.0% |
!!! | AAATCCTTTTTTCATGAACA+TGG | + | Chr5:103717845-103717864 | MsG0580029899.01.T01:CDS | 25.0% |
!!! | ATTAAATCTTTGAAGCGATT+CGG | + | Chr5:103717789-103717808 | MsG0580029899.01.T01:CDS | 25.0% |
!!! | GGTTTTGATATTTTAAGGTA+TGG | + | Chr5:103719752-103719771 | MsG0580029899.01.T01:intron | 25.0% |
!!! | TCAATGGTATGTAGTTTTAA+TGG | + | Chr5:103719267-103719286 | MsG0580029899.01.T01:intron | 25.0% |
!!! | TTTGATATTTTAGATTTGGG+CGG | + | Chr5:103718065-103718084 | MsG0580029899.01.T01:CDS | 25.0% |
!!! | TTTTGATTTTGTACCTACTT+GGG | + | Chr5:103719873-103719892 | MsG0580029899.01.T01:CDS | 25.0% |
AAAACTACATACCATTGAAG+TGG | - | Chr5:103719265-103719284 | None:intergenic | 30.0% | |
ACATGAATGGAATATGTCAT+TGG | + | Chr5:103718483-103718502 | MsG0580029899.01.T01:CDS | 30.0% | |
AGACTGTATATCTTCCAAAA+GGG | - | Chr5:103718389-103718408 | None:intergenic | 30.0% | |
AGTAGTTATGTTTGTGGATT+TGG | + | Chr5:103718260-103718279 | MsG0580029899.01.T01:CDS | 30.0% | |
ATCCCAATCCTGTATATTAA+TGG | + | Chr5:103719313-103719332 | MsG0580029899.01.T01:intron | 30.0% | |
ATGATGTAAGATTTGCACTA+TGG | + | Chr5:103718138-103718157 | MsG0580029899.01.T01:CDS | 30.0% | |
CAAGTAGGTACAAAATCAAA+AGG | - | Chr5:103719874-103719893 | None:intergenic | 30.0% | |
CATTCAAGTAGTTATGTTTG+TGG | + | Chr5:103718254-103718273 | MsG0580029899.01.T01:CDS | 30.0% | |
CCTATCTATTACGGAATTTA+AGG | + | Chr5:103719834-103719853 | MsG0580029899.01.T01:intron | 30.0% | |
CCTTAAATTCCGTAATAGAT+AGG | - | Chr5:103719837-103719856 | None:intergenic | 30.0% | |
CGTCAGATAAGATATTGTTA+CGG | - | Chr5:103717872-103717891 | None:intergenic | 30.0% | |
GATACATTATGGTGATAAGA+AGG | - | Chr5:103717897-103717916 | None:intergenic | 30.0% | |
GCTTATAACCAATACAATGA+GGG | - | Chr5:103718346-103718365 | None:intergenic | 30.0% | |
GGTTATTGCCATTAATATAC+AGG | - | Chr5:103719324-103719343 | None:intergenic | 30.0% | |
TAGACTGTATATCTTCCAAA+AGG | - | Chr5:103718390-103718409 | None:intergenic | 30.0% | |
TCTGAGTTAATGTTGTATTG+TGG | + | Chr5:103719809-103719828 | MsG0580029899.01.T01:intron | 30.0% | |
TGCCATTAATATACAGGATT+GGG | - | Chr5:103719318-103719337 | None:intergenic | 30.0% | |
TGTGTACAATTCTACATTGA+TGG | + | Chr5:103720111-103720130 | MsG0580029899.01.T01:CDS | 30.0% | |
TTCTAGGTGAAAACAAGAAA+AGG | - | Chr5:103718952-103718971 | None:intergenic | 30.0% | |
TTGCCATTAATATACAGGAT+TGG | - | Chr5:103719319-103719338 | None:intergenic | 30.0% | |
TTGTGATATAGCACTTTACA+AGG | + | Chr5:103718889-103718908 | MsG0580029899.01.T01:CDS | 30.0% | |
TTGTTCTTCATATGTGATCA+AGG | - | Chr5:103718663-103718682 | None:intergenic | 30.0% | |
! | AATTCAAATTAGATTGGCCA+AGG | + | Chr5:103719692-103719711 | MsG0580029899.01.T01:CDS | 30.0% |
! | ATTCAAATTAGATTGGCCAA+GGG | + | Chr5:103719693-103719712 | MsG0580029899.01.T01:CDS | 30.0% |
! | CTTTTACCACTCCTTAATAT+TGG | + | Chr5:103720020-103720039 | MsG0580029899.01.T01:CDS | 30.0% |
! | TGTATCTGCTAGTATGATTT+TGG | + | Chr5:103719731-103719750 | MsG0580029899.01.T01:intron | 30.0% |
! | TTTTGTCTTGTGAAATCTCA+GGG | + | Chr5:103719199-103719218 | MsG0580029899.01.T01:intron | 30.0% |
! | TTTTTGTCTTGTGAAATCTC+AGG | + | Chr5:103719198-103719217 | MsG0580029899.01.T01:intron | 30.0% |
!! | AAACAATTGGTGGTGTTAAA+TGG | + | Chr5:103718629-103718648 | MsG0580029899.01.T01:CDS | 30.0% |
!! | ACAAAATCAAAAGGGTATTG+AGG | - | Chr5:103719865-103719884 | None:intergenic | 30.0% |
!! | ACATTGATGGATTCTCTAAT+CGG | + | Chr5:103720124-103720143 | MsG0580029899.01.T01:CDS | 30.0% |
!! | GTCATTTGATTTGAACAAAG+AGG | + | Chr5:103718553-103718572 | MsG0580029899.01.T01:CDS | 30.0% |
!! | TGTATTGGTTATAAGCCATT+GGG | + | Chr5:103718350-103718369 | MsG0580029899.01.T01:CDS | 30.0% |
!! | TTGTATTGGTTATAAGCCAT+TGG | + | Chr5:103718349-103718368 | MsG0580029899.01.T01:CDS | 30.0% |
!!! | CTTTTGATTTTGTACCTACT+TGG | + | Chr5:103719872-103719891 | MsG0580029899.01.T01:CDS | 30.0% |
ACAGTCTAAGAAGTAACTCT+TGG | + | Chr5:103718402-103718421 | MsG0580029899.01.T01:CDS | 35.0% | |
ACTAAATCTAACTTCACCCT+TGG | - | Chr5:103719712-103719731 | None:intergenic | 35.0% | |
ATCAAGCACCTCAATCATTT+GGG | - | Chr5:103718855-103718874 | None:intergenic | 35.0% | |
ATGTCTCCAATATTAAGGAG+TGG | - | Chr5:103720029-103720048 | None:intergenic | 35.0% | |
ATTGTGGAGCCTATCTATTA+CGG | + | Chr5:103719825-103719844 | MsG0580029899.01.T01:intron | 35.0% | |
CAAATATATAGCGGCTAATG+AGG | - | Chr5:103719345-103719364 | None:intergenic | 35.0% | |
CTACCAAATCCATTTCAAGA+AGG | + | Chr5:103718014-103718033 | MsG0580029899.01.T01:CDS | 35.0% | |
CTTAAGAACCCAAATGATTG+AGG | + | Chr5:103718844-103718863 | MsG0580029899.01.T01:CDS | 35.0% | |
GGCTTATAACCAATACAATG+AGG | - | Chr5:103718347-103718366 | None:intergenic | 35.0% | |
GTTGAGGAAAATTGTGGTAT+AGG | - | Chr5:103718449-103718468 | None:intergenic | 35.0% | |
GTTTCACTTCCTTCTTGAAA+TGG | - | Chr5:103718026-103718045 | None:intergenic | 35.0% | |
TAACCAATACAATGAGGGAA+CGG | - | Chr5:103718341-103718360 | None:intergenic | 35.0% | |
TATATCTTCCAAAAGGGTTC+AGG | - | Chr5:103718383-103718402 | None:intergenic | 35.0% | |
TCCTTAGTTGAGGAAAATTG+TGG | - | Chr5:103718455-103718474 | None:intergenic | 35.0% | |
TCGGCTAATCATTATGGATT+TGG | + | Chr5:103719901-103719920 | MsG0580029899.01.T01:CDS | 35.0% | |
TTACCCTTTGTCATTCCAAA+AGG | - | Chr5:103718782-103718801 | None:intergenic | 35.0% | |
TTAGCATGAGCGATACATTA+TGG | - | Chr5:103717908-103717927 | None:intergenic | 35.0% | |
TTATTCCACCAATTGGAAGA+AGG | - | Chr5:103718919-103718938 | None:intergenic | 35.0% | |
TTCAAATTTCTCGCCAGAAA+AGG | - | Chr5:103717976-103717995 | None:intergenic | 35.0% | |
TTCTTGAATCTCCACTTCAA+TGG | + | Chr5:103719251-103719270 | MsG0580029899.01.T01:intron | 35.0% | |
! | ACCACAATTTTCCTCAACTA+AGG | + | Chr5:103718451-103718470 | MsG0580029899.01.T01:CDS | 35.0% |
! | ATTTTCCTCAACTAAGGACA+AGG | + | Chr5:103718457-103718476 | MsG0580029899.01.T01:CDS | 35.0% |
! | CCAGACAAAGACTTGTTTAT+GGG | + | Chr5:103717939-103717958 | MsG0580029899.01.T01:CDS | 35.0% |
! | CTTCCTTCTTGAAATGGATT+TGG | - | Chr5:103718020-103718039 | None:intergenic | 35.0% |
! | TCCAGACAAAGACTTGTTTA+TGG | + | Chr5:103717938-103717957 | MsG0580029899.01.T01:CDS | 35.0% |
! | TTAAGGTATGGTAGTGTTCA+TGG | + | Chr5:103719764-103719783 | MsG0580029899.01.T01:intron | 35.0% |
!! | GGAGTTTTGTATTCCTTTTC+TGG | + | Chr5:103717960-103717979 | MsG0580029899.01.T01:CDS | 35.0% |
!!! | AGAACCTTTTGGAATGACAA+AGG | + | Chr5:103718775-103718794 | MsG0580029899.01.T01:CDS | 35.0% |
!!! | GAACCTTTTGGAATGACAAA+GGG | + | Chr5:103718776-103718795 | MsG0580029899.01.T01:CDS | 35.0% |
AACCAATACAATGAGGGAAC+GGG | - | Chr5:103718340-103718359 | None:intergenic | 40.0% | |
AAGGAAGACCTTCTTCCAAT+TGG | + | Chr5:103718908-103718927 | MsG0580029899.01.T01:CDS | 40.0% | |
AAGGACAAGGTGTACATGAA+TGG | + | Chr5:103718470-103718489 | MsG0580029899.01.T01:CDS | 40.0% | |
ACCTTGAATTCGTCTGTAGT+TGG | - | Chr5:103718167-103718186 | None:intergenic | 40.0% | |
ATACCCTCAGACATAGATGA+TGG | + | Chr5:103718593-103718612 | MsG0580029899.01.T01:CDS | 40.0% | |
ATGTGCATCAAGGTCATGAT+CGG | - | Chr5:103719986-103720005 | None:intergenic | 40.0% | |
CAATATGCTTCACACGTCTA+TGG | + | Chr5:103720086-103720105 | MsG0580029899.01.T01:CDS | 40.0% | |
CCCATAAACAAGTCTTTGTC+TGG | - | Chr5:103717942-103717961 | None:intergenic | 40.0% | |
CGGACCATGTTCATGAAAAA+AGG | - | Chr5:103717852-103717871 | None:intergenic | 40.0% | |
CTTCATTTGGATGTGCATCA+AGG | - | Chr5:103719996-103720015 | None:intergenic | 40.0% | |
GAAGCTTCGGCTAATCATTA+TGG | + | Chr5:103719895-103719914 | MsG0580029899.01.T01:CDS | 40.0% | |
GATCAAGCACCTCAATCATT+TGG | - | Chr5:103718856-103718875 | None:intergenic | 40.0% | |
GCATTGCGTACAAACTGATA+TGG | + | Chr5:103718999-103719018 | MsG0580029899.01.T01:intron | 40.0% | |
GTCTAAGAAGTAACTCTTGG+AGG | + | Chr5:103718405-103718424 | MsG0580029899.01.T01:CDS | 40.0% | |
TCATTCCTCATAGCTCGAAT+AGG | + | Chr5:103718186-103718205 | MsG0580029899.01.T01:CDS | 40.0% | |
TCCAACTACAGACGAATTCA+AGG | + | Chr5:103718163-103718182 | MsG0580029899.01.T01:CDS | 40.0% | |
TCGAATAGGATTCATCCGTT+TGG | + | Chr5:103718200-103718219 | MsG0580029899.01.T01:CDS | 40.0% | |
TGAATCCTATTCGAGCTATG+AGG | - | Chr5:103718194-103718213 | None:intergenic | 40.0% | |
! | ATTGAGGTGCTTGATCTTGA+AGG | + | Chr5:103718860-103718879 | MsG0580029899.01.T01:CDS | 40.0% |
! | CATTGCGTTGAAGAACCTTT+TGG | + | Chr5:103718764-103718783 | MsG0580029899.01.T01:CDS | 40.0% |
! | TCAAAATGGTGGAGACGATA+AGG | - | Chr5:103718050-103718069 | None:intergenic | 40.0% |
! | TCATCTATGTCTGAGGGTAT+TGG | - | Chr5:103718593-103718612 | None:intergenic | 40.0% |
ACCAATACAATGAGGGAACG+GGG | - | Chr5:103718339-103718358 | None:intergenic | 45.0% | |
AGAGCCATCATCTATGTCTG+AGG | - | Chr5:103718600-103718619 | None:intergenic | 45.0% | |
GAAGACCTTCTTCCAATTGG+TGG | + | Chr5:103718911-103718930 | MsG0580029899.01.T01:intron | 45.0% | |
GAGCCATCATCTATGTCTGA+GGG | - | Chr5:103718599-103718618 | None:intergenic | 45.0% | |
GGTTCTTCAACGCAATGCAA+CGG | - | Chr5:103718761-103718780 | None:intergenic | 45.0% | |
GTACACCTTGTCCTTAGTTG+AGG | - | Chr5:103718465-103718484 | None:intergenic | 45.0% | |
GTCTTGTGAAATCTCAGGGT+TGG | + | Chr5:103719203-103719222 | MsG0580029899.01.T01:intron | 45.0% | |
TCGGATGCGTACGTAAATCA+TGG | + | Chr5:103717808-103717827 | MsG0580029899.01.T01:CDS | 45.0% | |
TGGCTAGCATTTGCACCAAA+CGG | - | Chr5:103718218-103718237 | None:intergenic | 45.0% | |
TGTACCTACTTGGGAAGCTT+CGG | + | Chr5:103719882-103719901 | MsG0580029899.01.T01:CDS | 45.0% | |
! | GAGATACACCTGAACCCTTT+TGG | + | Chr5:103718372-103718391 | MsG0580029899.01.T01:CDS | 45.0% |
!! | TATGTCTGAGGGTATTGGTG+TGG | - | Chr5:103718588-103718607 | None:intergenic | 45.0% |
!!! | ATTATAAATAATTTCTTTTT+TGG | + | Chr5:103719517-103719536 | MsG0580029899.01.T01:intron | 5.0% |
ACTGCGACGCAAGAAAAGGT+TGG | + | Chr5:103717717-103717736 | MsG0580029899.01.T01:CDS | 50.0% | |
GGTTCAGGTGTATCTCCCAA+TGG | - | Chr5:103718368-103718387 | None:intergenic | 50.0% | |
GTATCGCTCATGCTAATGCG+TGG | + | Chr5:103717912-103717931 | MsG0580029899.01.T01:CDS | 50.0% | |
TGTGACTGCGACGCAAGAAA+AGG | + | Chr5:103717713-103717732 | MsG0580029899.01.T01:CDS | 50.0% | |
TTAGCCGAAGCTTCCCAAGT+AGG | - | Chr5:103719889-103719908 | None:intergenic | 50.0% | |
GCCCCGTTCCCTCATTGTAT+TGG | + | Chr5:103718335-103718354 | MsG0580029899.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 103717699 | 103720197 | 103717699 | ID=MsG0580029899.01;Name=MsG0580029899.01 |
Chr5 | mRNA | 103717699 | 103720197 | 103717699 | ID=MsG0580029899.01.T01;Parent=MsG0580029899.01;Name=MsG0580029899.01.T01;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|584 |
Chr5 | exon | 103717699 | 103718929 | 103717699 | ID=MsG0580029899.01.T01:exon:5822;Parent=MsG0580029899.01.T01 |
Chr5 | exon | 103719560 | 103719741 | 103719560 | ID=MsG0580029899.01.T01:exon:5823;Parent=MsG0580029899.01.T01 |
Chr5 | exon | 103719856 | 103720197 | 103719856 | ID=MsG0580029899.01.T01:exon:5824;Parent=MsG0580029899.01.T01 |
Chr5 | CDS | 103717699 | 103718929 | 103717699 | ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01 |
Chr5 | CDS | 103719560 | 103719741 | 103719560 | ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01 |
Chr5 | CDS | 103719856 | 103720197 | 103719856 | ID=MsG0580029899.01.T01:cds;Parent=MsG0580029899.01.T01 |
Gene Sequence |
Protein sequence |